| Clone Name | rbags8e24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PAP2_HUMAN (Q9BXP8) Pappalysin-2 precursor (EC 3.4.24.-) (Pregna... | 31 | 2.5 | 2 | KCNS2_HUMAN (Q9ULS6) Potassium voltage-gated channel subfamily S... | 31 | 2.5 | 3 | KCNS2_RAT (Q9ER26) Potassium voltage-gated channel subfamily S m... | 30 | 4.3 | 4 | KCNS2_MOUSE (O35174) Potassium voltage-gated channel subfamily S... | 30 | 4.3 | 5 | SYMPK_HUMAN (Q92797) Symplekin | 29 | 9.6 | 6 | SYMPK_MOUSE (Q80X82) Symplekin | 29 | 9.6 |
|---|
>PAP2_HUMAN (Q9BXP8) Pappalysin-2 precursor (EC 3.4.24.-) (Pregnancy-associated| plasma protein-A2) (PAPP-A2) (Pregnancy-associated plasma protein-E1) (PAPP-E) Length = 1791 Score = 31.2 bits (69), Expect = 2.5 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +3 Query: 366 VIRMNVIAICIDRAANPDVLDSDARG*EEALDEATPGFHIVEHFTVQNL 512 VIR V+ IC D NP V + R EAL+EA ++I +V + Sbjct: 524 VIRYQVVNICDDEGLNPIVSEEQIRLQHEALNEAFSRYNISWQLSVHQV 572
>KCNS2_HUMAN (Q9ULS6) Potassium voltage-gated channel subfamily S member 2| (Voltage-gated potassium channel subunit Kv9.2) (Delayed-rectifier K(+) channel alpha subunit 2) Length = 477 Score = 31.2 bits (69), Expect = 2.5 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = +3 Query: 294 RQELVSSTRRSGHSKMAR--SI*SAIVIRMNVIAICIDRAANPDVLDSDARG*EEALDEA 467 R++L + G+S ++R SI S +V+ ++I +C++ + + DS E+ Sbjct: 170 RRQLWLALDNPGYSVLSRVFSILSILVVMGSIITMCLNSLPDFQIPDSQGNPGED----- 224 Query: 468 TPGFHIVEHFTV 503 P F IVEHF + Sbjct: 225 -PRFEIVEHFGI 235
>KCNS2_RAT (Q9ER26) Potassium voltage-gated channel subfamily S member 2| (Voltage-gated potassium channel subunit Kv9.2) (Delayed-rectifier K(+) channel alpha subunit 2) Length = 477 Score = 30.4 bits (67), Expect = 4.3 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = +3 Query: 294 RQELVSSTRRSGHSKMAR--SI*SAIVIRMNVIAICIDRAANPDVLDSDARG*EEALDEA 467 R++L + G+S ++R S+ S +V+ ++I +C++ + + DS E+ Sbjct: 170 RRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLPDFQIPDSQGNPGED----- 224 Query: 468 TPGFHIVEHFTV 503 P F IVEHF + Sbjct: 225 -PRFEIVEHFGI 235
>KCNS2_MOUSE (O35174) Potassium voltage-gated channel subfamily S member 2| (Voltage-gated potassium channel subunit Kv9.2) (Delayed-rectifier K(+) channel alpha subunit 2) Length = 477 Score = 30.4 bits (67), Expect = 4.3 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = +3 Query: 294 RQELVSSTRRSGHSKMAR--SI*SAIVIRMNVIAICIDRAANPDVLDSDARG*EEALDEA 467 R++L + G+S ++R S+ S +V+ ++I +C++ + + DS E+ Sbjct: 170 RRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLPDFQIPDSQGNPGED----- 224 Query: 468 TPGFHIVEHFTV 503 P F IVEHF + Sbjct: 225 -PRFEIVEHFGI 235
>SYMPK_HUMAN (Q92797) Symplekin| Length = 1274 Score = 29.3 bits (64), Expect = 9.6 Identities = 10/34 (29%), Positives = 20/34 (58%) Frame = +1 Query: 181 WAAYVECCRGVKEVGEEVTVQVRPEQLVSSTRRC 282 W +++CC+ K +V +Q+ P+QL + +C Sbjct: 1035 WEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKC 1068
>SYMPK_MOUSE (Q80X82) Symplekin| Length = 1284 Score = 29.3 bits (64), Expect = 9.6 Identities = 10/34 (29%), Positives = 20/34 (58%) Frame = +1 Query: 181 WAAYVECCRGVKEVGEEVTVQVRPEQLVSSTRRC 282 W +++CC+ K +V +Q+ P+QL + +C Sbjct: 1035 WEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKC 1068 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,332,918 Number of Sequences: 219361 Number of extensions: 1808099 Number of successful extensions: 4829 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4634 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4827 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)