ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags8e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
2dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
3dbj|AK070593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 5e-44
4ref|XM_482753.1| Oryza sativa (japonica cultivar-group), mRNA 68 4e-08
5ref|XM_507254.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 4e-08
6dbj|AK099156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
7dbj|AK061573.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
9dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
10gb|AY105251.1| Zea mays PCO080180 mRNA sequence 56 1e-04
11ref|NM_101771.1| Arabidopsis thaliana unknown protein AT1G19130 ... 50 0.008
12emb|BX817990.1|CNS0ACI4 Arabidopsis thaliana Full-length cDNA Co... 50 0.008
13gb|AY085739.1| Arabidopsis thaliana clone 17545 mRNA, complete s... 50 0.008
14gb|AC068602.2|AC068602 Genomic sequence for Arabidopsis thaliana... 50 0.008
15dbj|AK117302.1| Arabidopsis thaliana At1g19130 mRNA for unknown ... 50 0.008
16emb|BX323857.16| Mouse DNA sequence from clone RP23-12C2 on chro... 42 2.0
17gb|AF006988.1|HSCDCREL1 Homo sapiens septin (CDCrel-1) gene, alt... 42 2.0
18gb|AC102176.8| Mus musculus chromosome 15, clone RP23-480E14, co... 40 7.9
19gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.9
20ref|NM_011482.3| Mus musculus NHP2 non-histone chromosome protei... 40 7.9
21ref|XM_570647.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 7.9
22gb|AC125409.3| Mus musculus BAC clone RP23-127O4 from 12, comple... 40 7.9
23gb|BC083315.1| Mus musculus NHP2 non-histone chromosome protein ... 40 7.9
24gb|BC054450.1| Mus musculus NHP2 non-histone chromosome protein ... 40 7.9
25gb|BC026755.1| Mus musculus NHP2 non-histone chromosome protein ... 40 7.9
26emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete g... 40 7.9
27dbj|AK134943.1| Mus musculus adult male olfactory brain cDNA, RI... 40 7.9
28dbj|AK145391.1| Mus musculus morula whole body morula cDNA, RIKE... 40 7.9
29dbj|AK145608.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 40 7.9
30dbj|AK168930.1| Mus musculus 13 days embryo liver cDNA, RIKEN fu... 40 7.9
31dbj|AK168808.1| Mus musculus 17 days embryo stomach cDNA, RIKEN ... 40 7.9
32dbj|AK169103.1| Mus musculus 17 days embryo kidney cDNA, RIKEN f... 40 7.9
33gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cance... 40 7.9
34tpg|BK001435.1| TPA: TPA_exp: Homo sapiens SULT2A1P pseudogene, ... 40 7.9
35dbj|AK004489.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 7.9
36gb|AC156247.2| Xenopus tropicalis clone ISB1-181M9, complete seq... 40 7.9
37gb|AC156343.2| Xenopus tropicalis clone ISB1-163H16, complete se... 40 7.9
38gb|AC006116.1|AC006116 Homo sapiens chromosome 19, BAC CIT-B-393... 40 7.9
39gb|U95114.1|MMU95114 Mus musculus fertilization antigen-1 mRNA, ... 40 7.9
40gb|AC140943.1| Gallus gallus BAC clone TAM32-50F18 from chromoso... 40 7.9
41gb|AC134604.5| Mus musculus BAC clone RP23-296I5 from 12, comple... 40 7.9
42gb|AC147567.3| Mus musculus BAC clone RP23-107E14 from 6, comple... 40 7.9 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  186 bits (94), Expect = 5e-44
 Identities = 256/310 (82%)
 Strand = Plus / Plus

                                                                           
Query: 147     aaggtaattgatgaaagcttcagcgttaggagccaaagttttcatgccatcacgtgtggc 206
               |||||| |||||||||||||| || ||||||||||||| ||||||||  || ||||| ||
Sbjct: 5016547 aaggtagttgatgaaagcttctgctttaggagccaaagctttcatgctctcccgtgttgc 5016606

                                                                           
Query: 207     catttcatcatcctcgaactggtatgccggagcacaggtcactccaacgaaagaataatg 266
               |||||| || || || | |||| |||| ||||||||||| || || |||||||| || ||
Sbjct: 5016607 catttcgtcgtcttcaatctggaatgctggagcacaggttacaccgacgaaagagtagtg 5016666

                                                                           
Query: 267     caggtcagggtcccgtccgggtgtcttgacaaaaacactgccatcatcagtgaaggactc 326
               ||| |||| ||| | ||| || || |||||||| ||||| ||||| || |||||||||||
Sbjct: 5016667 cagctcagagtctcttccaggcgttttgacaaacacacttccatcttcggtgaaggactc 5016726

                                                                           
Query: 327     gatatcgtgggtcaggaaggcgccaaaccacacgttcggagggaccgtgtactgtggcct 386
               ||| |||  ||||| ||||||||||||||| || || ||||| || ||||| |||||| |
Sbjct: 5016727 gatgtcgcaggtcaagaaggcgccaaaccaaacatttggaggaactgtgtattgtggctt 5016786

                                                                           
Query: 387     ctgccctttccgtagatcaggaccgactactgtcatcttaacttgcccatcatcatgcac 446
                || || | |||||||||||| || || ||||||||||| | ||| ||||| ||||||||
Sbjct: 5016787 ttggccatgccgtagatcaggtccaacaactgtcatcttgaattgtccatcgtcatgcac 5016846

                         
Query: 447     ctcaaatacc 456
                |||||||||
Sbjct: 5016847 ttcaaatacc 5016856



 Score =  165 bits (83), Expect = 2e-37
 Identities = 257/315 (81%)
 Strand = Plus / Plus

                                                                           
Query: 142     ggaataaggtaattgatgaaagcttcagcgttaggagccaaagttttcatgccatcacgt 201
               |||| |||||| |||||||||||||| || |||||||| |  || ||||||   || |||
Sbjct: 5013390 ggaacaaggtagttgatgaaagcttcggctttaggagcaagtgtcttcatggtctcccgt 5013449

                                                                           
Query: 202     gtggccatttcatcatcctcgaactggtatgccggagcacaggtcactccaacgaaagaa 261
               || |||||||| |  ||||| |||||| |||| ||||||||||| || || |||||||| 
Sbjct: 5013450 gttgccatttcgttgtcctcaaactggaatgctggagcacaggttacaccgacgaaagag 5013509

                                                                           
Query: 262     taatgcaggtcagggtcccgtccgggtgtcttgacaaaaacactgccatcatcagtgaag 321
               || || || |||||||| | ||| || || |||||||| ||||| ||||| || ||||||
Sbjct: 5013510 tagtgaagttcagggtctcttcctggcgttttgacaaatacacttccatcttcggtgaag 5013569

                                                                           
Query: 322     gactcgatatcgtgggtcaggaaggcgccaaaccacacgttcggagggaccgtgtactgt 381
               ||||| || |||  ||||| ||||||||||||||| || || |||||||| ||||| |||
Sbjct: 5013570 gactcaatgtcgcaggtcaagaaggcgccaaaccaaacatttggagggactgtgtattgt 5013629

                                                                           
Query: 382     ggcctctgccctttccgtagatcaggaccgactactgtcatcttaacttgcccatcatca 441
               ||||| || || | |||||||||||| || || ||||||||||| |  || ||||| |||
Sbjct: 5013630 ggcctttggccatgccgtagatcaggtccaacgactgtcatcttgatctgtccatcgtca 5013689

                              
Query: 442     tgcacctcaaatacc 456
               || ||||||||||||
Sbjct: 5013690 tggacctcaaatacc 5013704



 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%)
 Strand = Plus / Plus

                                                                           
Query: 454     accgtgagaggctctcccatgtagtagtgccatgtctcagcgcaagggatgcggtgcagc 513
               ||||||||||| || ||||||||||||||||| |||||||| |||||||||||||||| |
Sbjct: 5013774 accgtgagaggttcccccatgtagtagtgccaggtctcagcacaagggatgcggtgcaac 5013833

                                                                           
Query: 514     cgagcaatctccccagcaggcaggaggaagtagattgcactactcacagcacgctccacc 573
                 ||||||||| ||||||||||| ||||| ||||| ||||| ||| ||| ||| || |||
Sbjct: 5013834 ttagcaatctctccagcaggcagcaggaaatagatggcactgctcccagaacggtctacc 5013893

                   
Query: 574     ttat 577
               ||||
Sbjct: 5013894 ttat 5013897



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 104/124 (83%)
 Strand = Plus / Plus

                                                                           
Query: 454     accgtgagaggctctcccatgtagtagtgccatgtctcagcgcaagggatgcggtgcagc 513
               ||||||||||| || ||||||||||||||||| |||||||| ||||||||||| |||| |
Sbjct: 5016919 accgtgagaggttcccccatgtagtagtgccaggtctcagcacaagggatgcgatgcaac 5016978

                                                                           
Query: 514     cgagcaatctccccagcaggcaggaggaagtagattgcactactcacagcacgctccacc 573
                 | | ||||| |||||||| || ||||| || || ||| | ||||||||||| || |||
Sbjct: 5016979 ttaacgatctctccagcaggtagcaggaaatatatggcattgctcacagcacggtctacc 5017038

                   
Query: 574     ttat 577
               ||||
Sbjct: 5017039 ttat 5017042
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>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1172G12
          Length = 171974

 Score =  186 bits (94), Expect = 5e-44
 Identities = 256/310 (82%)
 Strand = Plus / Plus

                                                                         
Query: 147   aaggtaattgatgaaagcttcagcgttaggagccaaagttttcatgccatcacgtgtggc 206
             |||||| |||||||||||||| || ||||||||||||| ||||||||  || ||||| ||
Sbjct: 58661 aaggtagttgatgaaagcttctgctttaggagccaaagctttcatgctctcccgtgttgc 58720

                                                                         
Query: 207   catttcatcatcctcgaactggtatgccggagcacaggtcactccaacgaaagaataatg 266
             |||||| || || || | |||| |||| ||||||||||| || || |||||||| || ||
Sbjct: 58721 catttcgtcgtcttcaatctggaatgctggagcacaggttacaccgacgaaagagtagtg 58780

                                                                         
Query: 267   caggtcagggtcccgtccgggtgtcttgacaaaaacactgccatcatcagtgaaggactc 326
             ||| |||| ||| | ||| || || |||||||| ||||| ||||| || |||||||||||
Sbjct: 58781 cagctcagagtctcttccaggcgttttgacaaacacacttccatcttcggtgaaggactc 58840

                                                                         
Query: 327   gatatcgtgggtcaggaaggcgccaaaccacacgttcggagggaccgtgtactgtggcct 386
             ||| |||  ||||| ||||||||||||||| || || ||||| || ||||| |||||| |
Sbjct: 58841 gatgtcgcaggtcaagaaggcgccaaaccaaacatttggaggaactgtgtattgtggctt 58900

                                                                         
Query: 387   ctgccctttccgtagatcaggaccgactactgtcatcttaacttgcccatcatcatgcac 446
              || || | |||||||||||| || || ||||||||||| | ||| ||||| ||||||||
Sbjct: 58901 ttggccatgccgtagatcaggtccaacaactgtcatcttgaattgtccatcgtcatgcac 58960

                       
Query: 447   ctcaaatacc 456
              |||||||||
Sbjct: 58961 ttcaaatacc 58970



 Score =  165 bits (83), Expect = 2e-37
 Identities = 257/315 (81%)
 Strand = Plus / Plus

                                                                         
Query: 142   ggaataaggtaattgatgaaagcttcagcgttaggagccaaagttttcatgccatcacgt 201
             |||| |||||| |||||||||||||| || |||||||| |  || ||||||   || |||
Sbjct: 55504 ggaacaaggtagttgatgaaagcttcggctttaggagcaagtgtcttcatggtctcccgt 55563

                                                                         
Query: 202   gtggccatttcatcatcctcgaactggtatgccggagcacaggtcactccaacgaaagaa 261
             || |||||||| |  ||||| |||||| |||| ||||||||||| || || |||||||| 
Sbjct: 55564 gttgccatttcgttgtcctcaaactggaatgctggagcacaggttacaccgacgaaagag 55623

                                                                         
Query: 262   taatgcaggtcagggtcccgtccgggtgtcttgacaaaaacactgccatcatcagtgaag 321
             || || || |||||||| | ||| || || |||||||| ||||| ||||| || ||||||
Sbjct: 55624 tagtgaagttcagggtctcttcctggcgttttgacaaatacacttccatcttcggtgaag 55683

                                                                         
Query: 322   gactcgatatcgtgggtcaggaaggcgccaaaccacacgttcggagggaccgtgtactgt 381
             ||||| || |||  ||||| ||||||||||||||| || || |||||||| ||||| |||
Sbjct: 55684 gactcaatgtcgcaggtcaagaaggcgccaaaccaaacatttggagggactgtgtattgt 55743

                                                                         
Query: 382   ggcctctgccctttccgtagatcaggaccgactactgtcatcttaacttgcccatcatca 441
             ||||| || || | |||||||||||| || || ||||||||||| |  || ||||| |||
Sbjct: 55744 ggcctttggccatgccgtagatcaggtccaacgactgtcatcttgatctgtccatcgtca 55803

                            
Query: 442   tgcacctcaaatacc 456
             || ||||||||||||
Sbjct: 55804 tggacctcaaatacc 55818



 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%)
 Strand = Plus / Plus

                                                                         
Query: 454   accgtgagaggctctcccatgtagtagtgccatgtctcagcgcaagggatgcggtgcagc 513
             ||||||||||| || ||||||||||||||||| |||||||| |||||||||||||||| |
Sbjct: 55888 accgtgagaggttcccccatgtagtagtgccaggtctcagcacaagggatgcggtgcaac 55947

                                                                         
Query: 514   cgagcaatctccccagcaggcaggaggaagtagattgcactactcacagcacgctccacc 573
               ||||||||| ||||||||||| ||||| ||||| ||||| ||| ||| ||| || |||
Sbjct: 55948 ttagcaatctctccagcaggcagcaggaaatagatggcactgctcccagaacggtctacc 56007

                 
Query: 574   ttat 577
             ||||
Sbjct: 56008 ttat 56011



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 104/124 (83%)
 Strand = Plus / Plus

                                                                         
Query: 454   accgtgagaggctctcccatgtagtagtgccatgtctcagcgcaagggatgcggtgcagc 513
             ||||||||||| || ||||||||||||||||| |||||||| ||||||||||| |||| |
Sbjct: 59033 accgtgagaggttcccccatgtagtagtgccaggtctcagcacaagggatgcgatgcaac 59092

                                                                         
Query: 514   cgagcaatctccccagcaggcaggaggaagtagattgcactactcacagcacgctccacc 573
               | | ||||| |||||||| || ||||| || || ||| | ||||||||||| || |||
Sbjct: 59093 ttaacgatctctccagcaggtagcaggaaatatatggcattgctcacagcacggtctacc 59152

                 
Query: 574   ttat 577
             ||||
Sbjct: 59153 ttat 59156
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>dbj|AK070593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058D05, full
            insert sequence
          Length = 2512

 Score =  186 bits (94), Expect = 5e-44
 Identities = 256/310 (82%)
 Strand = Plus / Minus

                                                                        
Query: 147  aaggtaattgatgaaagcttcagcgttaggagccaaagttttcatgccatcacgtgtggc 206
            |||||| |||||||||||||| || ||||||||||||| ||||||||  || ||||| ||
Sbjct: 2329 aaggtagttgatgaaagcttctgctttaggagccaaagctttcatgctctcccgtgttgc 2270

                                                                        
Query: 207  catttcatcatcctcgaactggtatgccggagcacaggtcactccaacgaaagaataatg 266
            |||||| || || || | |||| |||| ||||||||||| || || |||||||| || ||
Sbjct: 2269 catttcgtcgtcttcaatctggaatgctggagcacaggttacaccgacgaaagagtagtg 2210

                                                                        
Query: 267  caggtcagggtcccgtccgggtgtcttgacaaaaacactgccatcatcagtgaaggactc 326
            ||| |||| ||| | ||| || || |||||||| ||||| ||||| || |||||||||||
Sbjct: 2209 cagctcagagtctcttccaggcgttttgacaaacacacttccatcttcggtgaaggactc 2150

                                                                        
Query: 327  gatatcgtgggtcaggaaggcgccaaaccacacgttcggagggaccgtgtactgtggcct 386
            ||| |||  ||||| ||||||||||||||| || || ||||| || ||||| |||||| |
Sbjct: 2149 gatgtcgcaggtcaagaaggcgccaaaccaaacatttggaggaactgtgtattgtggctt 2090

                                                                        
Query: 387  ctgccctttccgtagatcaggaccgactactgtcatcttaacttgcccatcatcatgcac 446
             || || | |||||||||||| || || ||||||||||| | ||| ||||| ||||||||
Sbjct: 2089 ttggccatgccgtagatcaggtccaacaactgtcatcttgaattgtccatcgtcatgcac 2030

                      
Query: 447  ctcaaatacc 456
             |||||||||
Sbjct: 2029 ttcaaatacc 2020



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 104/124 (83%)
 Strand = Plus / Minus

                                                                        
Query: 454  accgtgagaggctctcccatgtagtagtgccatgtctcagcgcaagggatgcggtgcagc 513
            ||||||||||| || ||||||||||||||||| |||||||| ||||||||||| |||| |
Sbjct: 1957 accgtgagaggttcccccatgtagtagtgccaggtctcagcacaagggatgcgatgcaac 1898

                                                                        
Query: 514  cgagcaatctccccagcaggcaggaggaagtagattgcactactcacagcacgctccacc 573
              | | ||||| |||||||| || ||||| || || ||| | ||||||||||| || |||
Sbjct: 1897 ttaacgatctctccagcaggtagcaggaaatatatggcattgctcacagcacggtctacc 1838

                
Query: 574  ttat 577
            ||||
Sbjct: 1837 ttat 1834
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>ref|XM_482753.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 920

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 433 ccatcatcatgcacctcaaataccgtgagaggctctcccatgtagtagtgccatgtctca 492
           |||||||| || | |||||| |||||||||||||||||| ||||| |||||||||| |||
Sbjct: 408 ccatcatcgtgtagctcaaagaccgtgagaggctctcccttgtagaagtgccatgtttca 349

             
Query: 493 gc 494
           ||
Sbjct: 348 gc 347
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>ref|XM_507254.1| PREDICTED Oryza sativa (japonica cultivar-group), B1144B06.21 mRNA
          Length = 992

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 433 ccatcatcatgcacctcaaataccgtgagaggctctcccatgtagtagtgccatgtctca 492
           |||||||| || | |||||| |||||||||||||||||| ||||| |||||||||| |||
Sbjct: 468 ccatcatcgtgtagctcaaagaccgtgagaggctctcccttgtagaagtgccatgtttca 409

             
Query: 493 gc 494
           ||
Sbjct: 408 gc 407
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>dbj|AK099156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067L05, full
           insert sequence
          Length = 920

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 433 ccatcatcatgcacctcaaataccgtgagaggctctcccatgtagtagtgccatgtctca 492
           |||||||| || | |||||| |||||||||||||||||| ||||| |||||||||| |||
Sbjct: 408 ccatcatcgtgtagctcaaagaccgtgagaggctctcccttgtagaagtgccatgtttca 349

             
Query: 493 gc 494
           ||
Sbjct: 348 gc 347
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>dbj|AK061573.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-G01, full
           insert sequence
          Length = 992

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 433 ccatcatcatgcacctcaaataccgtgagaggctctcccatgtagtagtgccatgtctca 492
           |||||||| || | |||||| |||||||||||||||||| ||||| |||||||||| |||
Sbjct: 468 ccatcatcgtgtagctcaaagaccgtgagaggctctcccttgtagaagtgccatgtttca 409

             
Query: 493 gc 494
           ||
Sbjct: 408 gc 407
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 454      accgtgagaggctctcccatgtagtagtgccatgtctcagc 494
                |||||||||||||||||| ||||| |||||||||| |||||
Sbjct: 22353114 accgtgagaggctctcccttgtagaagtgccatgtttcagc 22353074
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>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1144B06
          Length = 133689

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 454   accgtgagaggctctcccatgtagtagtgccatgtctcagc 494
             |||||||||||||||||| ||||| |||||||||| |||||
Sbjct: 50097 accgtgagaggctctcccttgtagaagtgccatgtttcagc 50057
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>gb|AY105251.1| Zea mays PCO080180 mRNA sequence
          Length = 947

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 454 accgtgagaggctctcccatgtagtagtgccatgtctcagcgcaagggatgcggtg 509
           |||||||||||||||||| ||||| ||||||| || ||||| || || ||||||||
Sbjct: 409 accgtgagaggctctcccttgtagaagtgccaggtttcagcacagggaatgcggtg 354
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>ref|NM_101771.1| Arabidopsis thaliana unknown protein AT1G19130 mRNA, complete cds
          Length = 738

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 349 ccaaaccacacgttcggagggaccgtgtactgtggcctctg 389
           |||||||| ||||| ||||||||||||||||| ||| ||||
Sbjct: 351 ccaaaccagacgtttggagggaccgtgtactgaggcttctg 311
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>emb|BX817990.1|CNS0ACI4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL55ZD03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 831

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 349 ccaaaccacacgttcggagggaccgtgtactgtggcctctg 389
           |||||||| ||||| ||||||||||||||||| ||| ||||
Sbjct: 400 ccaaaccagacgtttggagggaccgtgtactgaggcttctg 360
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>gb|AY085739.1| Arabidopsis thaliana clone 17545 mRNA, complete sequence
          Length = 738

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 349 ccaaaccacacgttcggagggaccgtgtactgtggcctctg 389
           |||||||| ||||| ||||||||||||||||| ||| ||||
Sbjct: 351 ccaaaccagacgtttggagggaccgtgtactgaggcttctg 311
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>gb|AC068602.2|AC068602 Genomic sequence for Arabidopsis thaliana BAC F14D16 from chromosome I,
             complete sequence
          Length = 87508

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 349   ccaaaccacacgttcggagggaccgtgtactgtggcctctg 389
             |||||||| ||||| ||||||||||||||||| ||| ||||
Sbjct: 84625 ccaaaccagacgtttggagggaccgtgtactgaggcttctg 84665
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>dbj|AK117302.1| Arabidopsis thaliana At1g19130 mRNA for unknown protein, complete
           cds, clone: RAFL16-86-I21
          Length = 836

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 349 ccaaaccacacgttcggagggaccgtgtactgtggcctctg 389
           |||||||| ||||| ||||||||||||||||| ||| ||||
Sbjct: 415 ccaaaccagacgtttggagggaccgtgtactgaggcttctg 375
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>emb|BX323857.16| Mouse DNA sequence from clone RP23-12C2 on chromosome 4, complete
             sequence
          Length = 104942

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 376   tactgtggcctctgccctttc 396
             |||||||||||||||||||||
Sbjct: 92294 tactgtggcctctgccctttc 92314
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>gb|AF006988.1|HSCDCREL1 Homo sapiens septin (CDCrel-1) gene, alternatively spliced,
           complete cds, septin (CDCrel-1) gene, alternatively
           spliced, partial cds and platelet membrane glycoprotein
           Ib beta precursor (GPIb beta) gene, complete cds
          Length = 13728

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 523 tccccagcaggcaggaggaag 543
           |||||||||||||||||||||
Sbjct: 455 tccccagcaggcaggaggaag 435
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>gb|AC102176.8| Mus musculus chromosome 15, clone RP23-480E14, complete sequence
          Length = 181577

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   ctgtggcctctgccctttcc 397
             ||||||||||||||||||||
Sbjct: 72587 ctgtggcctctgccctttcc 72568
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>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 501     gatgcggtgcagccgagcaa 520
               ||||||||||||||||||||
Sbjct: 1401213 gatgcggtgcagccgagcaa 1401194
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>ref|NM_011482.3| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S.
           cerevisiae) (Nhp2l1), mRNA
          Length = 1259

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 ctgtggcctctgccctttcc 397
           ||||||||||||||||||||
Sbjct: 500 ctgtggcctctgccctttcc 519
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>ref|XM_570647.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CND05130) partial mRNA
          Length = 630

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 501 gatgcggtgcagccgagcaa 520
           ||||||||||||||||||||
Sbjct: 487 gatgcggtgcagccgagcaa 506
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>gb|AC125409.3| Mus musculus BAC clone RP23-127O4 from 12, complete sequence
          Length = 209670

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   ttaacttgcccatcatcatg 443
             ||||||||||||||||||||
Sbjct: 22442 ttaacttgcccatcatcatg 22423
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>gb|BC083315.1| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S.
           cerevisiae), mRNA (cDNA clone MGC:101925 IMAGE:5714819),
           complete cds
          Length = 1201

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 ctgtggcctctgccctttcc 397
           ||||||||||||||||||||
Sbjct: 420 ctgtggcctctgccctttcc 439
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>gb|BC054450.1| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S.
           cerevisiae), mRNA (cDNA clone MGC:62619 IMAGE:6491298),
           complete cds
          Length = 1218

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 ctgtggcctctgccctttcc 397
           ||||||||||||||||||||
Sbjct: 444 ctgtggcctctgccctttcc 463
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>gb|BC026755.1| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S.
           cerevisiae), mRNA (cDNA clone MGC:25294 IMAGE:3154066),
           complete cds
          Length = 1226

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 ctgtggcctctgccctttcc 397
           ||||||||||||||||||||
Sbjct: 444 ctgtggcctctgccctttcc 463
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>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 547     attgcactactcacagcacg 566
               ||||||||||||||||||||
Sbjct: 2011086 attgcactactcacagcacg 2011105
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>dbj|AK134943.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430523H23 product:sperm
           specific antigen 1, full insert sequence
          Length = 1763

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 ctgtggcctctgccctttcc 397
           ||||||||||||||||||||
Sbjct: 436 ctgtggcctctgccctttcc 455
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>dbj|AK145391.1| Mus musculus morula whole body morula cDNA, RIKEN full-length
           enriched library, clone:I0C0032L12 product:sperm
           specific antigen 1, full insert sequence
          Length = 1259

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 ctgtggcctctgccctttcc 397
           ||||||||||||||||||||
Sbjct: 500 ctgtggcctctgccctttcc 519
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>dbj|AK145608.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0021G14 product:sperm specific antigen
           1, full insert sequence
          Length = 1244

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 ctgtggcctctgccctttcc 397
           ||||||||||||||||||||
Sbjct: 480 ctgtggcctctgccctttcc 499
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>dbj|AK168930.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:I920065L05 product:sperm specific antigen
           1, full insert sequence
          Length = 1210

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 ctgtggcctctgccctttcc 397
           ||||||||||||||||||||
Sbjct: 451 ctgtggcctctgccctttcc 470
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>dbj|AK168808.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length
           enriched library, clone:I920056H18 product:NHP2-like
           protein 1 (High mobility group-like nuclear protein 2
           homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein)
           (OTK27) homolog [Homo sapiens], full insert sequence
          Length = 836

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 ctgtggcctctgccctttcc 397
           ||||||||||||||||||||
Sbjct: 468 ctgtggcctctgccctttcc 487
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>dbj|AK169103.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched
           library, clone:I920080B21 product:sperm specific antigen
           1, full insert sequence
          Length = 1247

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 ctgtggcctctgccctttcc 397
           ||||||||||||||||||||
Sbjct: 482 ctgtggcctctgccctttcc 501
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>gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 228481

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   ctgtggcctctgccctttcc 397
             ||||||||||||||||||||
Sbjct: 83652 ctgtggcctctgccctttcc 83671
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>tpg|BK001435.1| TPA: TPA_exp: Homo sapiens SULT2A1P pseudogene, complete sequence;
             alternatively spliced
          Length = 190728

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   gtggccatttcatcatcctc 221
             ||||||||||||||||||||
Sbjct: 62605 gtggccatttcatcatcctc 62586
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>dbj|AK004489.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1190005A22 product:sperm
           specific antigen 1, full insert sequence
          Length = 1210

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 ctgtggcctctgccctttcc 397
           ||||||||||||||||||||
Sbjct: 446 ctgtggcctctgccctttcc 465
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>gb|AC156247.2| Xenopus tropicalis clone ISB1-181M9, complete sequence
          Length = 96628

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   catcacgtgtggccatttca 213
             ||||||||||||||||||||
Sbjct: 47764 catcacgtgtggccatttca 47745
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>gb|AC156343.2| Xenopus tropicalis clone ISB1-163H16, complete sequence
          Length = 97681

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   catcacgtgtggccatttca 213
             ||||||||||||||||||||
Sbjct: 23273 catcacgtgtggccatttca 23254
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>gb|AC006116.1|AC006116 Homo sapiens chromosome 19, BAC CIT-B-393i15 (BC301323), complete
              sequence
          Length = 166711

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    gtggccatttcatcatcctc 221
              ||||||||||||||||||||
Sbjct: 119726 gtggccatttcatcatcctc 119707
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>gb|U95114.1|MMU95114 Mus musculus fertilization antigen-1 mRNA, complete cds
          Length = 642

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 ctgtggcctctgccctttcc 397
           ||||||||||||||||||||
Sbjct: 470 ctgtggcctctgccctttcc 489
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>gb|AC140943.1| Gallus gallus BAC clone TAM32-50F18 from chromosome ul, complete
             sequence
          Length = 142253

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   tgtactgtggcctctgccct 393
             ||||||||||||||||||||
Sbjct: 74530 tgtactgtggcctctgccct 74511
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>gb|AC134604.5| Mus musculus BAC clone RP23-296I5 from 12, complete sequence
          Length = 203284

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    ttaacttgcccatcatcatg 443
              ||||||||||||||||||||
Sbjct: 170081 ttaacttgcccatcatcatg 170062
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>gb|AC147567.3| Mus musculus BAC clone RP23-107E14 from 6, complete sequence
          Length = 191770

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 171   gttaggagccaaagttttcatgcc 194
             |||||||| |||||||||||||||
Sbjct: 28248 gttaggagacaaagttttcatgcc 28225


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,323,616
Number of Sequences: 3902068
Number of extensions: 4323616
Number of successful extensions: 75126
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74992
Number of HSP's gapped (non-prelim): 129
length of query: 583
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 560
effective length of database: 17,143,297,704
effective search space: 9600246714240
effective search space used: 9600246714240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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