| Clone Name | rbags8f08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y18626.1|TAE18626 Triticum aestivum mRNA for reversibly glycosylated polypeptide Length = 1393 Score = 65.9 bits (33), Expect = 1e-08 Identities = 33/33 (100%) Strand = Plus / Minus Query: 43 ctacttggctgctgccttgccgttcccagcagc 75 ||||||||||||||||||||||||||||||||| Sbjct: 1185 ctacttggctgctgccttgccgttcccagcagc 1153
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 42.1 bits (21), Expect = 0.20 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 cttggctgctgccttgccgtt 66 ||||||||||||||||||||| Sbjct: 708070 cttggctgctgccttgccgtt 708050
>ref|NM_210255.1| Eremothecium gossypii AER041Wp (AER041W), mRNA Length = 1311 Score = 42.1 bits (21), Expect = 0.20 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 cttggctgctgccttgccgtt 66 ||||||||||||||||||||| Sbjct: 252 cttggctgctgccttgccgtt 232
>ref|XM_956328.1| Neurospora crassa OR74A hypothetical protein ( (AL451017) related to septation (sepH) gene [Neurospora crassa OR74A] ) (NCU01335.1) partial mRNA Length = 4518 Score = 40.1 bits (20), Expect = 0.79 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gctgctgccttgccgttccc 69 |||||||||||||||||||| Sbjct: 71 gctgctgccttgccgttccc 52
>ref|XM_326827.1| Neurospora crassa OR74A hypothetical protein ( (AL451017) related to septation (sepH) gene [Neurospora crassa OR74A] ) (NCU01335.1) partial mRNA Length = 4518 Score = 40.1 bits (20), Expect = 0.79 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gctgctgccttgccgttccc 69 |||||||||||||||||||| Sbjct: 71 gctgctgccttgccgttccc 52
>emb|AL513465.1|NCB13A5 Neurospora crassa DNA linkage group V BAC clone B13A5 Length = 72305 Score = 40.1 bits (20), Expect = 0.79 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gctgctgccttgccgttccc 69 |||||||||||||||||||| Sbjct: 5756 gctgctgccttgccgttccc 5775
>emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cosmid contig 12F11 Length = 74317 Score = 40.1 bits (20), Expect = 0.79 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gctgctgccttgccgttccc 69 |||||||||||||||||||| Sbjct: 50162 gctgctgccttgccgttccc 50181
>gb|AC137741.5| Homo sapiens chromosome 8, clone CTD-2059D3, complete sequence Length = 117100 Score = 40.1 bits (20), Expect = 0.79 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 agctacttggctgctgcctt 60 |||||||||||||||||||| Sbjct: 99106 agctacttggctgctgcctt 99125
>gb|AC069181.9| Homo sapiens chromosome 8, clone RP11-200A24, complete sequence Length = 139409 Score = 40.1 bits (20), Expect = 0.79 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agctacttggctgctgcctt 60 |||||||||||||||||||| Sbjct: 101975 agctacttggctgctgcctt 101956
>dbj|AP006183.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1169H7, complete sequence Length = 158699 Score = 40.1 bits (20), Expect = 0.79 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agctacttggctgctgcctt 60 |||||||||||||||||||| Sbjct: 97255 agctacttggctgctgcctt 97236
>ref|XM_753249.1| Ustilago maydis 521 hypothetical protein (UM02195.1) partial mRNA Length = 1671 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 aaccatgcactcttgcctt 32 ||||||||||||||||||| Sbjct: 1625 aaccatgcactcttgcctt 1607
>gb|AC016642.7| Homo sapiens chromosome 5 clone RP11-479O16, complete sequence Length = 160907 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 ggctgctgccttgccgttc 67 ||||||||||||||||||| Sbjct: 88735 ggctgctgccttgccgttc 88717
>emb|AJ617794.1| Secale cereale mRNA for ocs-element binding factor 1 (obf1 gene) Length = 827 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ctacttggctgctgccttg 61 ||||||||||||||||||| Sbjct: 668 ctacttggctgctgccttg 686 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 513,873 Number of Sequences: 3902068 Number of extensions: 513873 Number of successful extensions: 30362 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 30349 Number of HSP's gapped (non-prelim): 13 length of query: 77 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 56 effective length of database: 17,151,101,840 effective search space: 960461703040 effective search space used: 960461703040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)