ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags8i14 |
|---|---|
| Clone Library Name | barley_pub |
>Y1367_METJA (Q58762) Hypothetical ABC transporter ATP-binding protein MJ1367| Length = 297 Score = 36.2 bits (82), Expect = 0.076 Identities = 25/69 (36%), Positives = 32/69 (46%) Frame = -1 Query: 583 PTDLVGHITKTPSVVEPKKPSTVPTDPVGHITKTFAQAVRLGEAKSVSPSGEKASAGDSS 404 PT V K + E KK +P V HIT A+A LGE + +GE + GD S Sbjct: 156 PTSAVDIKIKESIISELKKIKHIP---VLHITHDLAEARTLGEKVGIFMNGELIAFGDKS 212 Query: 403 VAAKPVEVK 377 + KP K Sbjct: 213 ILKKPKNKK 221
>ECA1_ARATH (P92939) Calcium-transporting ATPase 1, endoplasmic reticulum-type| (EC 3.6.3.8) Length = 1061 Score = 32.7 bits (73), Expect = 0.84 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = +3 Query: 402 TDESPAEA--FSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLGSTTLGVLVIWPTR 575 TD PA A F+P ++ P R + ++ W + ++G T+GV +IW T Sbjct: 828 TDGPPATALGFNPPDKDIMKKPPRRSDDSLITAWILFRYMVIGLYVGVATVGVFIIWYTH 887 Query: 576 S 578 S Sbjct: 888 S 888
>NFRKB_XENTR (Q6P4L9) Nuclear factor related to kappa-B-binding protein| (DNA-binding protein R kappa-B) Length = 1265 Score = 32.3 bits (72), Expect = 1.1 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 7/72 (9%) Frame = -1 Query: 592 STVPTDLVG----HITKTPSVVEPKKPSTVPTDPVGHITKTFAQAVRLGEAKSVS---PS 434 S P G H+T +PS P PST+ P +T + + RL A +S Sbjct: 990 SAAPVSTTGKGLLHVTSSPSSPSPPAPSTIKLTPEMKPAETSSSSFRLMPALGISVAEQK 1049 Query: 433 GEKASAGDSSVA 398 G+ +AG+S A Sbjct: 1050 GKVVTAGESKPA 1061
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 31.6 bits (70), Expect = 1.9 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Frame = +3 Query: 366 QLLSFTSTGL--AATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSV--GTVEGF 530 +LLS G A ++ A+ FS GL L +PS +L IW T + G VEG+ Sbjct: 120 ELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGY 178
>ECA4_ARATH (Q9XES1) Calcium-transporting ATPase 4, endoplasmic reticulum-type| (EC 3.6.3.8) Length = 1061 Score = 31.6 bits (70), Expect = 1.9 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = +3 Query: 402 TDESPAEA--FSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLGSTTLGVLVIWPTR 575 TD PA A F+P ++ P R + ++ W + ++G T+GV +IW T Sbjct: 828 TDGPPATALGFNPPDKDIMKKPPRRSDDSLITAWILFRYMVIGLYVGVATVGVFIIWYTH 887 Query: 576 S 578 + Sbjct: 888 N 888
>ECAP_LYCES (Q42883) Calcium-transporting ATPase, endoplasmic reticulum-type (EC| 3.6.3.8) Length = 1048 Score = 31.6 bits (70), Expect = 1.9 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = +3 Query: 402 TDESPAEA--FSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLGSTTLGVLVIWPTR 575 TD PA A F+P + ++ P R ++ W + ++G T+G+ ++W T+ Sbjct: 825 TDGPPATALGFNPADVDIMQKPPRKNTDALINSWVFFRYMVIGSYVGIATVGIFIVWYTQ 884 Query: 576 S 578 + Sbjct: 885 A 885
>KDSA_VIBPA (Q87RN0) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55)| (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) Length = 283 Score = 31.2 bits (69), Expect = 2.4 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = -1 Query: 580 TDLVGHITKTPSVVEPKKPSTVPTDPVGHITKTFAQ 473 TDLV + KT +V+ KKP + VG+I + FA+ Sbjct: 122 TDLVEAMAKTGAVINVKKPQFMSPGQVGNIVEKFAE 157
>KDSA_VIBCH (Q9KQ29) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55)| (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) Length = 283 Score = 31.2 bits (69), Expect = 2.4 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = -1 Query: 580 TDLVGHITKTPSVVEPKKPSTVPTDPVGHITKTFAQ 473 TDLV + KT +V+ KKP + VG+I + FA+ Sbjct: 122 TDLVEAMAKTGAVINVKKPQFMSPGQVGNIVEKFAE 157
>KDSA_VIBVY (Q7MMY2) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55)| (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) Length = 284 Score = 31.2 bits (69), Expect = 2.4 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = -1 Query: 580 TDLVGHITKTPSVVEPKKPSTVPTDPVGHITKTFAQ 473 TDLV + KT +V+ KKP + VG+I + FA+ Sbjct: 123 TDLVEAMAKTGAVINVKKPQFMSPGQVGNIVEKFAE 158
>KDSA_VIBVU (Q8DFG3) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55)| (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) Length = 284 Score = 31.2 bits (69), Expect = 2.4 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = -1 Query: 580 TDLVGHITKTPSVVEPKKPSTVPTDPVGHITKTFAQ 473 TDLV + KT +V+ KKP + VG+I + FA+ Sbjct: 123 TDLVEAMAKTGAVINVKKPQFMSPGQVGNIVEKFAE 158
>KDSA_PHOPR (Q6LNB8) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55)| (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) Length = 284 Score = 31.2 bits (69), Expect = 2.4 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = -1 Query: 580 TDLVGHITKTPSVVEPKKPSTVPTDPVGHITKTFAQ 473 TDLV + KT +V+ KKP + VG+I + FA+ Sbjct: 123 TDLVEAMAKTGAVINVKKPQYMSPGQVGNIVEKFAE 158
>ECA2_ARATH (O23087) Calcium-transporting ATPase 2, endoplasmic reticulum-type| (EC 3.6.3.8) Length = 1054 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Frame = +3 Query: 402 TDESPAEA--FSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLGSTTLGVLVIWPTR 575 TD PA A F+P + ++ P R + ++ W + ++G T+G+ V+W T+ Sbjct: 824 TDGPPATALGFNPADIDIMKKPPRKSDDCLIDSWVLIRYLVIGSYVGVATVGIFVLWYTQ 883 Query: 576 S 578 + Sbjct: 884 A 884
>AT2A1_MAKNI (P70083) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC| 3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 996 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = +3 Query: 357 IQLQLLSFTSTGLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLG 536 +QL ++ + GL AT A F+P L ++ P R+ ++ W + G++G Sbjct: 787 VQLLWVNLVTDGLPAT----ALGFNPPDLDIMGKPPRSPKEPLISGWLFFRYMAIGGYVG 842 Query: 537 STTLGVLVIW 566 + T+G W Sbjct: 843 AATVGGAAWW 852
>AT2A1_RABIT (P04191) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC| 3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 1001 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = +3 Query: 357 IQLQLLSFTSTGLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLG 536 +QL ++ + GL AT A F+P L ++ P R+ ++ W + G++G Sbjct: 790 VQLLWVNLVTDGLPAT----ALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVG 845 Query: 537 STTLGVLVIW 566 + T+G W Sbjct: 846 AATVGAAAWW 855
>AT2A1_HUMAN (O14983) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC| 3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 1001 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = +3 Query: 357 IQLQLLSFTSTGLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLG 536 +QL ++ + GL AT A F+P L ++ P R+ ++ W + G++G Sbjct: 790 VQLLWVNLVTDGLPAT----ALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVG 845 Query: 537 STTLGVLVIW 566 + T+G W Sbjct: 846 AATVGAAAWW 855
>AT2A1_RAT (Q64578) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC| 3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum class Length = 994 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = +3 Query: 357 IQLQLLSFTSTGLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLG 536 +QL ++ + GL AT A F+P L ++ P R+ ++ W + G++G Sbjct: 790 VQLLWVNLVTDGLPAT----ALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVG 845 Query: 537 STTLGVLVIW 566 + T+G W Sbjct: 846 AATVGAAAWW 855
>AT2A1_RANES (Q92105) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC| 3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 994 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = +3 Query: 357 IQLQLLSFTSTGLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLG 536 +QL ++ + GL AT A F+P L ++ P R+ ++ W + G++G Sbjct: 790 VQLLWVNLVTDGLPAT----ALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVG 845 Query: 537 STTLGVLVIW 566 + T+G W Sbjct: 846 AATVGAAAWW 855
>AT2A1_MOUSE (Q8R429) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC| 3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 994 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = +3 Query: 357 IQLQLLSFTSTGLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLG 536 +QL ++ + GL AT A F+P L ++ P R+ ++ W + G++G Sbjct: 790 VQLLWVNLVTDGLPAT----ALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVG 845 Query: 537 STTLGVLVIW 566 + T+G W Sbjct: 846 AATVGAAAWW 855
>AT2A1_CHICK (P13585) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC| 3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 994 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = +3 Query: 357 IQLQLLSFTSTGLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLG 536 +QL ++ + GL AT A F+P L ++ P R+ ++ W + G++G Sbjct: 790 VQLLWVNLVTDGLPAT----ALGFNPPDLDIMDKPPRSPKEPLISGWLFFRYLAIGGYVG 845 Query: 537 STTLGVLVIW 566 + T+G W Sbjct: 846 AATVGAAAWW 855
>ATC1_ANOGA (Q7PPA5) Calcium-transporting ATPase sarcoplasmic/endoplasmic| reticulum type (EC 3.6.3.8) (Calcium pump) Length = 1018 Score = 30.8 bits (68), Expect = 3.2 Identities = 19/70 (27%), Positives = 32/70 (45%) Frame = +3 Query: 357 IQLQLLSFTSTGLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLG 536 +QL ++ + GL AT A F+P L ++ P R A ++ W + G++G Sbjct: 789 VQLLWVNLVTDGLPAT----ALGFNPPDLDIMTKPPRKADEGLISGWLFFRYMAIGGYVG 844 Query: 537 STTLGVLVIW 566 T+G W Sbjct: 845 CATVGGAAWW 854
>MURA_TREDE (Q73Q03) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC| 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT) Length = 426 Score = 30.4 bits (67), Expect = 4.2 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = +2 Query: 458 AKPH--SLCKGLGDMAHRVSGYGRGLLGLDNARSLGDMAHQV 577 ++PH LCK L M ++SG G +L ++ + L H++ Sbjct: 187 SEPHVQELCKMLNKMGAKISGVGSNILTIEGVKKLNGTEHRI 228
>MTGA_PSEAE (Q9I6B7) Monofunctional biosynthetic peptidoglycan transglycosylase| (EC 2.4.2.-) (Monofunctional TGase) Length = 232 Score = 30.4 bits (67), Expect = 4.2 Identities = 17/42 (40%), Positives = 22/42 (52%) Frame = +1 Query: 421 RLSRQKGSRSWPRQAAQPVQRSW*YGPPGQWVRSRASWARQR 546 RLSR + S+ A P W PG +VR RA+W RQ+ Sbjct: 179 RLSRTQASQL---AAVLPSPLKWSAARPGPYVRQRAAWIRQQ 217
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +3 Query: 390 GLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSV--GTVEGF 530 G A ++ ++ FS GL L +PS +L IW T + G VEG+ Sbjct: 129 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGY 177
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +3 Query: 390 GLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSV--GTVEGF 530 G A ++ ++ FS GL L +PS +L IW T + G VEG+ Sbjct: 89 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGY 137
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +3 Query: 390 GLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSV--GTVEGF 530 G A ++ ++ FS GL L +PS +L IW T + G VEG+ Sbjct: 130 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGY 178
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +3 Query: 390 GLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSV--GTVEGF 530 G A ++ ++ FS GL L +PS +L IW T + G VEG+ Sbjct: 127 GEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGY 175
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +3 Query: 390 GLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSV--GTVEGF 530 G A ++ ++ FS GL L +PS +L IW T + G VEG+ Sbjct: 127 GEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGY 175
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +3 Query: 390 GLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSV--GTVEGF 530 G A ++ ++ FS GL L +PS +L IW T + G VEG+ Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGY 174
>ZAN_RABIT (P57999) Zonadhesin (Fragment)| Length = 2282 Score = 29.6 bits (65), Expect = 7.1 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = -1 Query: 604 PKKPSTVPTDLVGHITKTPSVVEPKKPSTVPTDP 503 P +P TVPT+ +T+ P+V P + +++PT+P Sbjct: 392 PTEPPTVPTEKPTVLTEKPTV--PTEETSIPTEP 423 Score = 29.6 bits (65), Expect = 7.1 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = -1 Query: 607 EPKKPSTVPTDLVGHITKTPSVVEPKKPSTVPTD 506 EP K +T+PT+ T+ P+V P +P TVPT+ Sbjct: 370 EPPKETTIPTEPPTVPTEPPTV--PTEPPTVPTE 401
>KDSA_YERPS (Q66AX1) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55)| (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) Length = 284 Score = 29.6 bits (65), Expect = 7.1 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -1 Query: 580 TDLVGHITKTPSVVEPKKPSTVPTDPVGHITKTFAQA 470 TDLV + +T +V+ KKP V +G+I + F +A Sbjct: 122 TDLVEAMARTGAVINVKKPQFVSPGQMGNIVEKFKEA 158
>KDSA_YERPE (Q8ZEX4) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55)| (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) Length = 284 Score = 29.6 bits (65), Expect = 7.1 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -1 Query: 580 TDLVGHITKTPSVVEPKKPSTVPTDPVGHITKTFAQA 470 TDLV + +T +V+ KKP V +G+I + F +A Sbjct: 122 TDLVEAMARTGAVINVKKPQFVSPGQMGNIVEKFKEA 158
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 29.6 bits (65), Expect = 7.1 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +3 Query: 390 GLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSV--GTVEGF 530 G A ++ ++ FS GL L +PS +L IW T + G VEG+ Sbjct: 117 GEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGY 165
>ATC_ARTSF (P35316) Calcium-transporting ATPase sarcoplasmic/endoplasmic| reticulum type (EC 3.6.3.8) (Calcium pump) Length = 1003 Score = 29.6 bits (65), Expect = 7.1 Identities = 18/70 (25%), Positives = 32/70 (45%) Frame = +3 Query: 357 IQLQLLSFTSTGLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSVGTVEGFLG 536 +QL ++ + GL AT A F+P L ++ P R A ++ W + ++G Sbjct: 794 VQLLWVNLVTDGLPAT----ALGFNPPDLDIMNKPPRRADEGLITGWLFFRYMAIGTYVG 849 Query: 537 STTLGVLVIW 566 + T+G W Sbjct: 850 AATVGAAAHW 859
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 29.6 bits (65), Expect = 7.1 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +3 Query: 390 GLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSV--GTVEGF 530 G A ++ ++ FS GL L +PS +L IW T + G VEG+ Sbjct: 124 GEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGY 172
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +3 Query: 390 GLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSV--GTVEGF 530 G A ++ A+ FS GL L +PS +L IW V G VEG+ Sbjct: 129 GEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY 177
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 29.3 bits (64), Expect = 9.3 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +3 Query: 390 GLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSV--GTVEGF 530 G A ++ ++ FS GL L +PS +L IW T + G VEG+ Sbjct: 125 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGY 173
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +3 Query: 390 GLAATDESPAEAFSPEGLTLLASPSRTACAKVLVIWPTGSV--GTVEGF 530 G A ++ A+ FS GL L +PS +L IW V G VEG+ Sbjct: 128 GEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,821,836 Number of Sequences: 219361 Number of extensions: 2063255 Number of successful extensions: 5894 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 5518 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5884 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
