ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbaak4i23 | 470 | AV912584 | not_full | dbj|D86327.1| Triticum aestivum mRNA for catalase, complete cds Length = 1573 | 81 | not_full | CATA1_WHEAT (Q43206) Catalase-1 (EC 1.11.1.6) Length = 492 | 41 | -- | --- | - | -- | --- | - |
| rbaak4i21 | 504 | AV912583 | not_full | ref|XM_472925.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 378 | 61 | not_full | YN8H_YEAST (P53729) Hypothetical 48.1 kDa protein in SEC12-SSK2 intergenic region Length = 429 | 1 | -- | --- | - | -- | --- | - |
| rbaak4i20 | 263 | AV912582 | not_full | emb|AL121585.22|HSBA504H3 Human DNA sequence from clone RP11-504H3 on chromosome 20 Contains gene SNX5 for sorting nexin 5, the C20orf72 gene, the PTMAP3 gene for PTMA (prothymosin, alpha) pseudogene 3, the 3NULL end of the ZNF339 gene for zinc finger protei | 19 | not_full | SYN_THEAC (Q9HKS7) Asparaginyl-tRNA synthetase (EC 6.1.1.22) (Asparagine--tRNA ligase) (AsnRS) Length = 429 | 4 | -- | --- | - | -- | --- | - |
| rbaak4i19 | 273 | AV912581 | not_full | ref|XM_472416.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 429 | 55 | not_full | S6A17_RAT (P31662) Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (Solute carrier family 6 member 17) Length = 727 | 20 | -- | --- | - | -- | --- | - |
| rbaak4i18 | 648 | AV912580 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 70 | not_full | CR2AC_BACTU (Q45743) Pesticidal crystal protein cry2Ac (Insecticidal delta-endotoxin CryIIA(c)) (Crystaline entomocidal protoxin) (70 kDa crystal protein) Length = 622 | 9 | -- | --- | - | -- | --- | - |
| rbaak4i17 | 569 | AV912579 | not_full | gb|AY105690.1| Zea mays PCO065072 mRNA sequence Length = 1632 | 73 | not_full | HSP7S_PEA (Q02028) Stromal 70 kDa heat shock-related protein, chloroplast precursor Length = 706 | 262 | -- | --- | - | -- | --- | - |
| rbaak4i16 | 355 | AV912578 | not_full | emb|Z28347.1|HVPLASC1 H.vulgare (NK 1558) gene for plastocyanin Length = 1884 | 7 | not_full | PLAS_ORYSA (P20423) Plastocyanin, chloroplast precursor Length = 154 | 4 | -- | --- | - | -- | --- | - |
| rbaak4i15 | 303 | AV912577 | not_full | emb|X74545.1|TAATP2 T.aestivum atp-2 mRNA for ATP synthase beta subunit Length = 1891 | 69 | not_full | ATPBM_NICPL (P17614) ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14) Length = 560 | 173 | -- | --- | - | -- | --- | - |
| rbaak4i14 | 496 | AV912576 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_AEGCR (P25413) Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 421 | 500 | -- | --- | - | -- | --- | - |
| rbaak4i13 | 485 | AV912575 | not_full | emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24, complete sequence Length = 127506 | 76 | not_full | SHH_CHICK (Q91035) Sonic hedgehog protein precursor (SHH) [Contains: Sonic hedgehog protein N-product; Sonic hedgehog protein C-product] Length = 425 | 3 | -- | --- | - | -- | --- | - |
| rbaak4i12 | 505 | AV912574 | not_full | dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 | 392 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 164 | -- | --- | - | -- | --- | - |
| rbaak4i11 | 632 | AV912573 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 185 | not_full | CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) Length = 421 | 20 | -- | --- | - | -- | --- | - |
| rbaak4i10 | 572 | AV912572 | not_full | ref|XM_483802.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 | 121 | not_full | TT12_ARATH (Q9LYT3) TRANSPARENT TESTA 12 protein Length = 507 | 64 | -- | --- | - | -- | --- | - |
| rbaak4i09 | 710 | AV912571 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 38 | not_full | EXTN1_ARATH (Q38913) Extensin-1 precursor (AtExt1) (AtExt4) Length = 373 | 95 | -- | --- | - | -- | --- | - |
| rbaak4i08 | 47 | AV832665 | not_full | emb|AL133269.17| Human DNA sequence from clone RP3-468K3 on chromosome 6q25-26 Contains a beta tubulin pseudogene, complete sequence Length = 90687 | 20 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4i07 | 549 | AV912570 | not_full | emb|AJ534445.1|HVU534445 Hordeum vulgare mRNA for hexose transporter (stp1 gene) Length = 2614 | 55 | not_full | CSBC_BACSU (P46333) Probable metabolite transport protein csbC Length = 461 | 135 | -- | --- | - | -- | --- | - |
| rbaak4i06 | 456 | AV912569 | not_full | emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 | 392 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 162 | -- | --- | - | -- | --- | - |
| rbaak4i05 | 251 | AV912568 | not_full | gb|M98254.1|BLYPSAD Barley PSI-D subunit of photosystem I (PsaD) mRNA, complete cds Length = 810 | 30 | not_full | PSAD_HORVU (P36213) Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D) Length = 205 | 31 | -- | --- | - | -- | --- | - |
| rbaak4i04 | 627 | AV912567 | not_full | emb|AJ495771.1|HVU495771 Hordeum vulgare partial mRNA for putative thioredoxin reductase Length = 642 | 102 | not_full | THIO_SHIFL (P0AA30) Thioredoxin 1 (TRX1) (TRX) Length = 108 | 188 | -- | --- | - | -- | --- | - |
| rbaak4i03 | 628 | AV912566 | not_full | ref|XM_467365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 | 122 | not_full | IPYR_ORYSA (O22537) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 214 | 132 | -- | --- | - | -- | --- | - |
| rbaak4i02 | 406 | AV912565 | not_full | dbj|AK105083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F02, full insert sequence Length = 441 | 267 | not_full | ZG67_XENLA (P18734) Gastrula zinc finger protein XLCGF67.1 (Fragment) Length = 139 | 23 | -- | --- | - | -- | --- | - |
| rbaak4i01 | 471 | AV912564 | not_full | gb|AY090544.1| Deschampsia antarctica clone Dacor 0.63. one helix protein mRNA, complete cds Length = 634 | 69 | not_full | PSBS_LYCES (P54773) Photosystem II 22 kDa protein, chloroplast precursor (CP22) Length = 276 | 33 | -- | --- | - | -- | --- | - |
| rbaak4h24 | 551 | AV912563 | not_full | gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 | 39 | not_full | IHFB_CAUCR (Q9A2H5) Integration host factor beta-subunit (IHF-beta) Length = 96 | 3 | -- | --- | - | -- | --- | - |
| rbaak4h23 | 118 | AV912562 | not_full | gb|AC121814.3| Mus musculus BAC clone RP23-457H19 from chromosome 15, complete sequence Length = 188928 | 18 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4h22 | 532 | AV912561 | not_full | ref|XM_472744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 | 500 | not_full | G3PA_MAIZE (P09315) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) Length = 403 | 264 | -- | --- | - | -- | --- | - |
| rbaak4h21 | 334 | AV912560 | not_full | gb|L13437.2|WHTWSC19AA Triticum aestivum cold acclimation protein WCS19 mRNA, complete cds Length = 657 | 102 | not_full | LEA29_GOSHI (P13940) Late embryogenesis abundant protein D-29 (LEA D-29) Length = 302 | 70 | -- | --- | - | -- | --- | - |
| rbaak4h20 | 592 | AV912559 | not_full | gb|AF220609.1| Oryza sativa multifunctional protein mRNA, complete cds Length = 2241 | 255 | not_full | MFP_ORYSA (Q8W1L6) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase L | 50 | -- | --- | - | -- | --- | - |
| rbaak4h19 | 347 | AV912558 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4h18 | 362 | AV912557 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4h17 | 672 | AV912556 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4h16 | 343 | AV912555 | not_full | ref|NM_192267.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1191 | 7 | not_full | Y3806_PSEAE (Q51385) Hypothetical UPF0063 protein PA3806 Length = 379 | 18 | -- | --- | - | -- | --- | - |
| rbaak4h13 | 518 | AV912554 | not_full | emb|X84738.1|HVNADPHPO H.vulgare mRNA for NADPH-protochlorophyllide oxidoreductase Length = 1345 | 92 | not_full | PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 395 | 30 | -- | --- | - | -- | --- | - |
| rbaak4h12 | 586 | AV912553 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4h11 | 767 | AV912552 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4h09 | 595 | AV912551 | not_full | emb|Z34917.1|HVUNKNOWN Hordeum vulgare mRNA for bas1 protein Length = 860 | 85 | not_full | BAS1_HORVU (Q96468) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) Length = 210 | 108 | -- | --- | - | -- | --- | - |
| rbaak4h08 | 395 | AV912550 | not_full | dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 | 388 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 176 | -- | --- | - | -- | --- | - |
| rbaak4h07 | 543 | AV912549 | not_full | gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 | 473 | not_full | CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor (LHCII type I CAB-3C) (LHCP) Length = 267 | 105 | -- | --- | - | -- | --- | - |
| rbaak4h05 | 149 | AV912548 | not_full | gb|AF343494.1| Hordeum vulgare clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1377 | 184 | not_full | PGKH_TOBAC (Q42961) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) Length = 481 | 246 | -- | --- | - | -- | --- | - |
| rbaak4h04 | 278 | AV912547 | not_full | emb|AL136164.8| Human DNA sequence from clone RP3-331H24 on chromosome 6 Contains the 5NULL end of a novel gene, the gene for a novel protein similar to opioid growth factor receptor and a CpG island, complete sequence Length = 108253 | 13 | not_full | FUS_RINDR (P41356) Fusion glycoprotein F0 precursor [Contains: Fusion glycoprotein F2; Fusion glycoprotein F1] Length = 546 | 19 | -- | --- | - | -- | --- | - |
| rbaak4h03 | 718 | AV912546 | not_full | ref|NM_192031.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 591 | 43 | not_full | RS20_SYNPX (Q7U8K6) 30S ribosomal protein S20 Length = 98 | 218 | -- | --- | - | -- | --- | - |
| rbaak4h02 | 554 | AV832664 | not_full | gb|AF509746.1| Hordeum vulgare subsp. spontaneum OSU6 receptor-like kinase gene, complete cds Length = 2513 | 105 | not_full | ALR3_SALTI (Q8Z300) Alanine racemase 3 (EC 5.1.1.1) Length = 368 | 2 | -- | --- | - | -- | --- | - |
| rbaak4h01 | 62 | AV832663 | not_full | ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 | 83 | not_full | CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor (Allergen Api g 3) Length = 264 | 71 | -- | --- | - | -- | --- | - |
| rbaak4g24 | 68 | AV912545 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 100 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 100 | -- | --- | - | -- | --- | - |
| rbaak4g23 | 451 | AV912544 | not_full | gb|BT016462.1| Zea mays clone Contig295 mRNA sequence Length = 1014 | 500 | not_full | HSP71_ARATH (P22953) Heat shock cognate 70 kDa protein 1 (Hsc70.1) Length = 651 | 202 | -- | --- | - | -- | --- | - |
| rbaak4g22 | 605 | AV912543 | not_full | emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 | 406 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 158 | -- | --- | - | -- | --- | - |
| rbaak4g21 | 194 | AV912542 | not_full | gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence Length = 197242 | 17 | full | HYALP_RAT (Q62803) Hyaluronidase PH-20 precursor (EC 3.2.1.35) (Hyal-PH20) (Sperm surface protein PH-20) (Sperm adhesion molecule 1) (Sperm surface antigen 2B1) Length = 512 | 2 | -- | --- | - | -- | --- | - |
| rbaak4g20 | 366 | AV912541 | not_full | emb|X68655.1|HVCW18 H.vulgare Cw-18 mRNA Length = 732 | 500 | not_full | BLT4_HORVU (P25307) BLT4 protein precursor Length = 130 | 70 | -- | --- | - | -- | --- | - |
| rbaak4g19 | 314 | AV912540 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4g18 | 530 | AV912539 | not_full | gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 | 500 | not_full | CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor (LHCII type I CAB-25) (LHCP) Length = 266 | 115 | -- | --- | - | -- | --- | - |
| rbaak4g17 | 401 | AV912538 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
