ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaak4i01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PSBS_LYCES (P54773) Photosystem II 22 kDa protein, chloroplast p... 43 5e-04
2PSBS_TOBAC (Q9SMB4) Photosystem II 22 kDa protein, chloroplast p... 42 6e-04
3PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast p... 42 8e-04
4YCF17_PORPU (P51355) Hypothetical 5.5 kDa protein ycf17 (ORF48) 41 0.001
5HEMH_ANASP (Q8YQR8) Ferrochelatase (EC 4.99.1.1) (Protoheme ferr... 39 0.005
6PSBS_ARATH (Q9XF91) Photosystem II 22 kDa protein, chloroplast p... 37 0.019
7YCF17_CYAPA (P48367) Hypothetical 5.5 kDa protein ycf17 36 0.043
8PSBS_SPIOL (Q02060) Photosystem II 22 kDa protein, chloroplast p... 36 0.043
9HEMH_SYNY3 (P54225) Ferrochelatase (EC 4.99.1.1) (Protoheme ferr... 36 0.043
10HEMH2_ARATH (O04921) Ferrochelatase-2, chloroplast precursor (EC... 36 0.043
11HEMH_ORYSA (O22101) Ferrochelatase-2, chloroplast precursor (EC ... 35 0.13
12HEMH_SYNP6 (Q5N2B2) Ferrochelatase (EC 4.99.1.1) (Protoheme ferr... 34 0.16
13HEMH_SYNPX (Q7U5G0) Ferrochelatase (EC 4.99.1.1) (Protoheme ferr... 32 0.63
14HEMH_SYNEL (Q8DGU6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferr... 32 0.63
15YCF17_GUITH (O78425) Hypothetical 6.2 kDa protein ycf17 32 1.1
16HEMH_PROMA (Q7VD58) Ferrochelatase (EC 4.99.1.1) (Protoheme ferr... 32 1.1
17ELI6_HORVU (P14896) Low molecular mass early light-inducible pro... 31 1.4
18ELI9_HORVU (P14897) Low molecular mass early light-inducible pro... 31 1.4
19PYRD_COXBU (Q83CY0) Dihydroorotate dehydrogenase (EC 1.3.3.1) (D... 31 1.8
20HEMH_PROMM (Q7V6C6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferr... 31 1.8
21CPT1C_MOUSE (Q8BGD5) Carnitine O-palmitoyltransferase I, brain i... 30 3.1
22SMOK_RHOSH (P54933) ATP-binding transport protein smoK (Protein ... 30 3.1
23TSSC4_HUMAN (Q9Y5U2) Protein TSSC4 (Tumor-suppressing subchromos... 29 5.3
24YL062_MIMIV (Q5UPE3) Putative ankyrin repeat protein L62 29 5.3
25Y4NJ_RHISN (P55582) Hypothetical GMC-type oxidoreductase y4nJ 29 6.9
26BIOH_NEIG1 (Q5F641) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s... 29 6.9
27AREA_ASPNG (O13412) Nitrogen regulatory protein areA 28 9.1
28MAK5_KLULA (Q6CTN7) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-) 28 9.1
29GUAA_RHORT (Q2RXI5) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 28 9.1
30TNIK_HUMAN (Q9UKE5) TRAF2 and NCK-interacting kinase (EC 2.7.11.1) 28 9.1
31MNTH_BRUSU (P65545) Probable manganese transport protein mntH 28 9.1
32MNTH_BRUME (P65544) Probable manganese transport protein mntH 28 9.1
33NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleo... 28 9.1

>PSBS_LYCES (P54773) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 276

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
 Frame = -1

Query: 372 NAATNR--SPRAAAFRVRAAKLPAGVQVPRAQPKLSEPF------LGFTKTAEVWNSRAC 217
           NA++++  S   A F+ +A   P  V  P+ + K+ +        +GFTK  E++  R  
Sbjct: 48  NASSSKFTSTTVALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVA 107

Query: 216 MMGLIGTFIVELILHKGVLEIIGFEVGKGLDIPL*FALPLCLWMMI 79
           M+G   + + E I  KG+L  +  E G    IP+  A PL L+ ++
Sbjct: 108 MIGFAASLLGEAITGKGILAQLNLETG----IPIYEAEPLLLFFIL 149



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>PSBS_TOBAC (Q9SMB4) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 274

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
 Frame = -1

Query: 354 SPRAAAFRVRAAKLPAGVQVPRAQPKLSEPF------LGFTKTAEVWNSRACMMGLIGTF 193
           S   A F+ +A K PA   VP+ + K+ +        +GFTK  E++  R  M+G   + 
Sbjct: 55  STTVALFKSKA-KAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 113

Query: 192 IVELILHKGVLEIIGFEVGKGLDIPL*FALPLCLWMMI 79
           + E I  KG+L  +  E G    IP+  A PL L+ ++
Sbjct: 114 LGEAITGKGILAQLNLETG----IPIYEAEPLLLFFIL 147



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>PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 276

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
 Frame = -1

Query: 354 SPRAAAFRVRAAKLPAGVQVPRAQPKLSEPF------LGFTKTAEVWNSRACMMGLIGTF 193
           S   A F+ +A   P  V  P+ + K+ +        +GFTK  E++  R  M+G   + 
Sbjct: 56  STTVALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 115

Query: 192 IVELILHKGVLEIIGFEVGKGLDIPL*FALPLCLWMMI 79
           + E I  KG+L  +  E G    IP+  A PL L+ ++
Sbjct: 116 LGEAITGKGILAQLNLETG----IPIYEAEPLLLFFIL 149



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>YCF17_PORPU (P51355) Hypothetical 5.5 kDa protein ycf17 (ORF48)|
          Length = 48

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = -1

Query: 264 FLGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 148
           F GFT +AE WN R  M+G +    +EL+  KG+L + G
Sbjct: 7   FWGFTDSAETWNGRFAMIGFMAVIFIELVTGKGLLYLSG 45



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>HEMH_ANASP (Q8YQR8) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 388

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 18/37 (48%), Positives = 25/37 (67%)
 Frame = -1

Query: 258 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 148
           G T +AEVWN R  M+G I   I+EL+  +G+L +IG
Sbjct: 350 GMTSSAEVWNGRIAMLGFI-ALIIELVTGQGLLHMIG 385



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>PSBS_ARATH (Q9XF91) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 265

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
 Frame = -1

Query: 342 AAFRVRAAKLPAGVQVPRAQPKL----SEPFLGFTKTAEVWNSRACMMGLIGTFIVELIL 175
           A F+ +    P  V+ P+++ +     +   +GFTK  E++  R  M+G   + + E + 
Sbjct: 52  ALFKPKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALT 111

Query: 174 HKGVLEIIGFEVGKGLDIPL*FALPLCLWMMI 79
            KG+L  +  E G    IP+  A PL L+ ++
Sbjct: 112 GKGILAQLNLETG----IPIYEAEPLLLFFIL 139



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>YCF17_CYAPA (P48367) Hypothetical 5.5 kDa protein ycf17|
          Length = 49

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 258 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 148
           GFT  AE WN R  M+G I   + E +  +G L  +G
Sbjct: 11  GFTSGAENWNGRLAMLGFIAALLTESLTGQGTLHFLG 47



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>PSBS_SPIOL (Q02060) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 274

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
 Frame = -1

Query: 321 AKLPAGVQVPRAQPKL----SEPFLGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEI 154
           AK P  V+ P+ + +     +   +GFTK  E++  R  M+G   + + E I  KG+L  
Sbjct: 68  AKAPKKVEKPKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFAASLLGEGITGKGILSQ 127

Query: 153 IGFEVGKGLDIPL*FALPLCLWMMI 79
           +  E G    IP+  A PL L+ ++
Sbjct: 128 LNLETG----IPIYEAEPLLLFFIL 148



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>HEMH_SYNY3 (P54225) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 387

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -1

Query: 258 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 148
           G T  AEVWN R  M+G I   +VELI  +G L  +G
Sbjct: 350 GLTTAAEVWNGRLAMLGFI-ALLVELISGQGPLHFVG 385



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>HEMH2_ARATH (O04921) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)|
           (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme
           synthetase 2)
          Length = 512

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -1

Query: 258 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVL 160
           G+TK+AE WN RA M+ ++   ++E+   KG L
Sbjct: 471 GWTKSAETWNGRAAMLAVLALLVLEVTTGKGFL 503



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>HEMH_ORYSA (O22101) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)|
           (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme
           synthetase 2)
          Length = 526

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -1

Query: 258 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVL 160
           G+TK+AE WN RA M+ ++   ++E+   +G L
Sbjct: 484 GWTKSAETWNGRAAMLAVLALLVLEVTTGEGFL 516



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>HEMH_SYNP6 (Q5N2B2) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 387

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 258 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 148
           G T  AEVWN R  M+G +   +VEL+  +G L  +G
Sbjct: 350 GITLNAEVWNGRIAMLGFL-ALLVELLTGRGPLHALG 385



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>HEMH_SYNPX (Q7U5G0) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 391

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 258 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 148
           G+  ++EVWN R  M+G    F++ELI   G L  +G
Sbjct: 354 GWNNSSEVWNGRLAMLG-FSAFLLELISGHGPLHALG 389



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>HEMH_SYNEL (Q8DGU6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 388

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 258 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 148
           G T  AE WN R  M+G +   ++ELI  +G L ++G
Sbjct: 351 GMTSAAERWNGRLAMLGFL-ALMIELISGQGPLHMLG 386



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>YCF17_GUITH (O78425) Hypothetical 6.2 kDa protein ycf17|
          Length = 53

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 258 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEII 151
           GF   AE WN R  M+  +    VE I +K VL+++
Sbjct: 15  GFNVYAENWNGRLAMISFLLIICVEFITNKNVLDLV 50



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>HEMH_PROMA (Q7VD58) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 391

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 24/59 (40%), Positives = 30/59 (50%)
 Frame = -1

Query: 324 AAKLPAGVQVPRAQPKLSEPFLGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 148
           AAKLP  V++   Q K      G+  +AEVWN R  M   I  F  EL++  G L  IG
Sbjct: 336 AAKLPEKVKL-YPQEKWQ---WGWNNSAEVWNGRVAMFVFIICFF-ELVIGNGPLHYIG 389



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>ELI6_HORVU (P14896) Low molecular mass early light-inducible protein HV60,|
           chloroplast precursor (ELIP)
          Length = 167

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = -1

Query: 426 SMVHAPSLLAVQTFRGQRNAATNRSPRAAA-FRVRAAKLPAGVQVPRAQPKLSEPFLG-- 256
           +MV   + LAV+  RG    +   S    A F    A L     VP  Q + +E   G  
Sbjct: 74  AMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAI 133

Query: 255 FTKTAEVWNSRACMMGLIGTFIVELI 178
               AE+WN R  M+GL+     E+I
Sbjct: 134 MNANAELWNGRFAMIGLVALAATEII 159



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>ELI9_HORVU (P14897) Low molecular mass early light-inducible protein HV90,|
           chloroplast precursor (ELIP)
          Length = 172

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = -1

Query: 426 SMVHAPSLLAVQTFRGQRNAATNRSPRAAA-FRVRAAKLPAGVQVPRAQPKLSEPFLG-- 256
           +MV   + LAV+  RG    +   S    A F    A L     VP  Q + +E   G  
Sbjct: 79  AMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAI 138

Query: 255 FTKTAEVWNSRACMMGLIGTFIVELI 178
               AE+WN R  M+GL+     E+I
Sbjct: 139 MNANAELWNGRFAMLGLVALAATEII 164



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>PYRD_COXBU (Q83CY0) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 347

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = -1

Query: 315 LPAGVQVPRAQPKLSEPFLGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIGFEVG 136
           +  G   P+ QP  S+P +     A    +R     L   ++VE +  + V  I+G  +G
Sbjct: 82  IEVGAVTPKPQPGNSKPRIFRLPQARALINRMGFNNLGVDYLVEQLKRRKVKGIVGVNIG 141

Query: 135 KGLDIPL 115
           K L  PL
Sbjct: 142 KNLTTPL 148



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>HEMH_PROMM (Q7V6C6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 391

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 258 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 148
           G   ++E WN R  M+G    F++ELI   G L  IG
Sbjct: 354 GLNTSSEAWNGRIAMLG-FAAFLLELISGHGPLHAIG 389



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>CPT1C_MOUSE (Q8BGD5) Carnitine O-palmitoyltransferase I, brain isoform (EC|
           2.3.1.21) (Carnitine palmitoyltransferase 1C) (CPT IC)
          Length = 798

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 12/63 (19%)
 Frame = +2

Query: 293 GTWTPAGSLAARTLK------------AAALGERLVAAFLCPRKVWTARRDGA*TMEATA 436
           GT +P G L+ R L+            A  L E L A    PR +W   R+   T  ATA
Sbjct: 344 GTHSPNGLLSPRALEQQFQDILDDPSPACPLEEHLAALTAAPRSMWAQVRESVKTHAATA 403

Query: 437 IGA 445
           + A
Sbjct: 404 LEA 406



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>SMOK_RHOSH (P54933) ATP-binding transport protein smoK (Protein polK)|
          Length = 332

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +1

Query: 226 GVPDLGRLGEPEER---LTQLGLRPRHLDSGRELGCPDSESGRS 348
           G P +  +  PE      T +G+RP H+D  RE G  + E G S
Sbjct: 235 GSPKMNLIEGPEAAKHGATTIGIRPEHIDLSREAGAWEGEVGVS 278



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>TSSC4_HUMAN (Q9Y5U2) Protein TSSC4 (Tumor-suppressing subchromosomal|
           transferable fragment candidate gene 4 protein)
           (Tumor-suppressing STF cDNA 4 protein)
          Length = 329

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 193 EGPDE-SHHAGPGVPDLGRLGEPEERLTQLGLRPRHLDSGRELGCPDSES 339
           EGP E +H AGPG P+    G P   L ++      + SG   G P  E+
Sbjct: 252 EGPVELAHLAGPGSPEAEEWGSPHGGLQEVEALSGSVHSGSVPGLPPVET 301



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>YL062_MIMIV (Q5UPE3) Putative ankyrin repeat protein L62|
          Length = 252

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 228 SRACMMGLIGTFIVELILHKGVLEIIGFEVGKGLDI 121
           S+ C + LIG   V+   + G LEII + V +G D+
Sbjct: 7   SKGCDISLIGDVAVQYACYGGHLEIIKYLVSQGADV 42



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>Y4NJ_RHISN (P55582) Hypothetical GMC-type oxidoreductase y4nJ|
          Length = 505

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
 Frame = -1

Query: 363 TNRSPRAAAFRVRAAKL----PAGVQVPRAQPKLSEPFLGFTKTAEVWNSRACMMGLIGT 196
           TNR     A+R+  +      P GV   R  P ++EP + F    E W S   ++ L+G 
Sbjct: 327 TNRGDLMQAWRLCGSYYGMIRPRGVGSVRPLPGINEPLVSFKLAPEDWISLGQVLTLLGQ 386

Query: 195 FIVELILHKGVLEIIGFE 142
            +      K +  I G E
Sbjct: 387 AMFAAGARKVIPSISGHE 404



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>BIOH_NEIG1 (Q5F641) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 258

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 142 FETDYLKNT--FVQYQLHDEGPDESHHAGPGVPDLGRLGEPE 261
           F TDY K+   F+Q QL    PD +   G  +PDL R G P+
Sbjct: 134 FRTDYAKHIKQFLQLQLLHT-PDAAEIIGRILPDLARCGTPQ 174



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>AREA_ASPNG (O13412) Nitrogen regulatory protein areA|
          Length = 882

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 19/86 (22%), Positives = 36/86 (41%)
 Frame = +1

Query: 103 ESKLQRNIEAFPHFETDYLKNTFVQYQLHDEGPDESHHAGPGVPDLGRLGEPEERLTQLG 282
           +++ QR +  +    T  L  +     + ++  D+SHH G     +   G P        
Sbjct: 430 DARTQRRVPNYVSHRTSNLSASLQPRYMFNQNQDQSHHTGNHSSSMHSPGYPIP------ 483

Query: 283 LRPRHLDSGRELGCPDSESGRSR*AV 360
            +P+H+D  + L   D  +G S  A+
Sbjct: 484 -QPQHVDPTQVLNPNDFSTGASHAAM 508



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>MAK5_KLULA (Q6CTN7) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)|
          Length = 796

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -3

Query: 241 RGLELQGLHDGTHRDLHRGADIAQRCS*DNRFRSGERPRYSFVVCSPSLPM 89
           RGL++ G+    H  L R AD+    S   R   G+    S ++CSP   M
Sbjct: 580 RGLDISGIKHVLHYHLPRSADVYIHRS--GRTARGDNEGVSVMICSPQESM 628



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>GUAA_RHORT (Q2RXI5) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 525

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 205 ESHHAGPGVPDLGRLG--EPEERLTQLGLRPRHLDSGRELGCPDSESGR 345
           +SHH   G+P+  ++   EP   L +  +R    D GRELG PD   GR
Sbjct: 355 KSHHNVGGLPERMKMALVEPLRELFKDEVR----DLGRELGLPDEMVGR 399



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>TNIK_HUMAN (Q9UKE5) TRAF2 and NCK-interacting kinase (EC 2.7.11.1)|
          Length = 1360

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -3

Query: 421 GSCTISPSSPDLPRTEECCH*PLTESGRFQSPGSQAPCRSP 299
           GS  I  S+PDL RTE     PL  +    S  S  P   P
Sbjct: 700 GSQPIRASNPDLRRTEPILESPLQRTSSGSSSSSSTPSSQP 740



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>MNTH_BRUSU (P65545) Probable manganese transport protein mntH|
          Length = 456

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = -1

Query: 300 QVPRAQPKLSEPFLGFTKTAEVWNSRACM---MGLIGTFIV--ELILHKGVLE 157
           Q+  AQP+  E   GF  T E+ ++   +   +G+IG  ++   L LH G+++
Sbjct: 200 QIIMAQPQWGEVIKGFAPTTEIVSNPDMLYIALGIIGATVMPHNLYLHSGIVQ 252



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>MNTH_BRUME (P65544) Probable manganese transport protein mntH|
          Length = 456

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = -1

Query: 300 QVPRAQPKLSEPFLGFTKTAEVWNSRACM---MGLIGTFIV--ELILHKGVLE 157
           Q+  AQP+  E   GF  T E+ ++   +   +G+IG  ++   L LH G+++
Sbjct: 200 QIIMAQPQWGEVIKGFAPTTEIVSNPDMLYIALGIIGATVMPHNLYLHSGIVQ 252



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>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 131  PFPTSKPIISRTPLCNISSTMKVPMSPIMQALEFQTSAVLVNPRNGSLSLGCA 289
            P PTS P +S   L + ++T  +PMS      E  +SA+   P +  +S   A
Sbjct: 1463 PLPTSFPTLSFGSLLSSATTPSLPMSAGRSTEEATSSALPEKPGDSEVSASAA 1515


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,564,803
Number of Sequences: 219361
Number of extensions: 1577305
Number of successful extensions: 4525
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4523
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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