ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4h21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L13437.2|WHTWSC19AA Triticum aestivum cold acclimation protein WCS19 mRNA, complete cds Length = 657 Score = 365 bits (184), Expect = 6e-98 Identities = 277/307 (90%), Gaps = 7/307 (2%) Strand = Plus / Minus Query: 24 tacgtatatgcattc-ttacattgcaaaatgaatcgagagatacagatcgggctagtcga 82 ||||||||||||||| ||||| || ||||||||| ||| |||||||||||| |||||| | Sbjct: 564 tacgtatatgcattccttacaatggaaaatgaattgagcgatacagatcggactagtcaa 505 Query: 83 cgtattgtcagcttagctttagctagcttccttcttggccgcggcggcgaccttgtccgt 142 |||| ||| ||||||||| ||||||||| ||||||||||||||||| |||||||| Sbjct: 504 cgtagtgttagcttagct------agcttcctttttggccgcggcggcgactttgtccgt 451 Query: 143 gatgccctgtgcggcgtccttggcgccgtcccacgcctcctccgtcgccttcttggcctg 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 450 gatgccctgtgcggcgtccttggcgccgtcccacgcctcctccgtcgccttcttcgcctg 391 Query: 203 ctccgcgaggtccttggccttgtcgtccacctcggtcgcgcccttcccggcttcctccac 262 ||| ||| |||||||||||| ||||||||||| |||||||||| |||||||||||| | Sbjct: 390 ctcgccgaagtccttggccttcgcgtccacctcgctcgcgcccttgccggcttcctccgc 331 Query: 263 ggccttgtcggtgttgcccgacacggcctccgccgcctccgccacgcccttcttcagctc 322 |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||| ||| Sbjct: 330 ggccttctcggtgttgcccgagacggcctccgcagcctccgccacgcccttcttcaactc 271 Query: 323 gtcggcc 329 ||||||| Sbjct: 270 gtcggcc 264
>gb|AF491840.1| Secale cereale cultivar Musketeer REP14 mRNA, complete cds Length = 613 Score = 357 bits (180), Expect = 1e-95 Identities = 263/291 (90%), Gaps = 6/291 (2%) Strand = Plus / Minus Query: 39 ttacattgcaaaatgaatcgagagatacagatcgggctagtcgacgtattgtcagcttag 98 ||||| || ||||||||| |||||||||| ||||| |||||| ||||||||| ||||||| Sbjct: 546 ttacaatggaaaatgaattgagagatacatatcggactagtcaacgtattgttagcttag 487 Query: 99 ctttagctagcttccttcttggccgcggcggcgaccttgtccgtgatgccctgtgcggcg 158 | ||||||||| ||||||||| | |||||||||||||||||||||||||||||| Sbjct: 486 tt------agcttcctttttggccgcgtccgcgaccttgtccgtgatgccctgtgcggcg 433 Query: 159 tccttggcgccgtcccacgcctcctccgtcgccttcttggcctgctccgcgaggtccttg 218 |||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| Sbjct: 432 tccttggcgccgtcccacgcctcctccgtcgccttcttcgcctgctccccgaagtccttg 373 Query: 219 gccttgtcgtccacctcggtcgcgcccttcccggcttcctccacggccttgtcggtgttg 278 |||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 372 gccttgtcgtccacttcgctcgcgcccttcccggcttcctccgcggccttctcggtgttg 313 Query: 279 cccgacacggcctccgccgcctccgccacgcccttcttcagctcgtcggcc 329 ||||| |||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 312 cccgagacggcctcagccgcctccgccacgcccttcttcaacccgtcggcc 262 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 aagtacgtatatgcattcttaca 43 ||||||||||||||||||||||| Sbjct: 576 aagtacgtatatgcattcttaca 554
>dbj|AB095006.1| Triticum aestivum Wcor15 gene for chloroplast-targeted COR protein, complete cds Length = 4549 Score = 339 bits (171), Expect = 3e-90 Identities = 263/294 (89%), Gaps = 6/294 (2%) Strand = Plus / Minus Query: 36 ttcttacattgcaaaatgaatcgagagatacagatcgggctagtcgacgtattgtcagct 95 |||||||| || ||||||||| |||||||||| ||||| |||||| ||| ||||| |||| Sbjct: 3356 ttcttacaatggaaaatgaattgagagatacatatcggactagtcaacgcattgttagct 3297 Query: 96 tagctttagctagcttccttcttggccgcggcggcgaccttgtccgtgatgccctgtgcg 155 ||| | ||||||||| ||||||||| | ||||||||||||||||||||||||||| Sbjct: 3296 tagtt------agcttcctttttggccgcgtccgcgaccttgtccgtgatgccctgtgcg 3243 Query: 156 gcgtccttggcgccgtcccacgcctcctccgtcgccttcttggcctgctccgcgaggtcc 215 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| Sbjct: 3242 gcgtccttggcgccgtcccacgcctcctccgtcgccttcttcgcctgctcgccgaagtcc 3183 Query: 216 ttggccttgtcgtccacctcggtcgcgcccttcccggcttcctccacggccttgtcggtg 275 |||||||| |||||||||||| ||||||| || |||||||||||| ||||||| |||||| Sbjct: 3182 ttggccttctcgtccacctcgctcgcgcctttgccggcttcctccgcggccttctcggtg 3123 Query: 276 ttgcccgacacggcctccgccgcctccgccacgcccttcttcagctcgtcggcc 329 |||||||| |||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 3122 ttgcccgagacggcctcagccgcctccgccacgcccttcttcaactcgtcggcc 3069 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 aagtacgtatatgcattcttaca 43 ||||||||||||||||||||||| Sbjct: 3383 aagtacgtatatgcattcttaca 3361
>gb|AF491837.1| Triticum aestivum cultivar Fredrick WCOR14c mRNA, complete cds Length = 604 Score = 79.8 bits (40), Expect = 5e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 121 ccgcggcggcgaccttgtccgtgatgccctgtgcggcgtccttggcgccgtcccacgcct 180 ||||||||| ||| | ||| | || ||||||||||||||| |||| | |||||||||||| Sbjct: 403 ccgcggcggtgacgtcgtcggcgacgccctgtgcggcgtctttggtggcgtcccacgcct 344 Query: 181 cctccgtcgccttcttggcctgctccgcgaggtccttggc 220 |||||||||||| ||| |||| ||| | ||||||||||| Sbjct: 343 cctccgtcgcctgcttcgccttctcgcccaggtccttggc 304
>emb|AJ512944.1|HVU512944 Hordeum vulgare cor14b gene for cold regulated protein Length = 1395 Score = 79.8 bits (40), Expect = 5e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 121 ccgcggcggcgaccttgtccgtgatgccctgtgcggcgtccttggcgccgtcccacgcct 180 ||||||||||||| ||||| | || || ||| ||||||||||||| | |||||||||| | Sbjct: 1258 ccgcggcggcgacgttgtcggcgacgctctgcgcggcgtccttggtggcgtcccacgctt 1199 Query: 181 cctccgtcgccttcttggcctgctccgcgaggtcct 216 |||||| ||||| |||||||||| | ||||||||| Sbjct: 1198 cctccgccgcctgcttggcctgcccgccgaggtcct 1163
>gb|M60732.1|BLYCLDAA Hordeum vulgare cold-regulated mRNA, 3' end Length = 653 Score = 79.8 bits (40), Expect = 5e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 121 ccgcggcggcgaccttgtccgtgatgccctgtgcggcgtccttggcgccgtcccacgcct 180 ||||||||||||| ||||| | || || ||| ||||||||||||| | |||||||||| | Sbjct: 492 ccgcggcggcgacgttgtcggcgacgctctgcgcggcgtccttggtggcgtcccacgctt 433 Query: 181 cctccgtcgccttcttggcctgctccgcgaggtcct 216 |||||| ||||| |||||||||| | ||||||||| Sbjct: 432 cctccgccgcctgcttggcctgcccgccgaggtcct 397
>gb|AF491839.1| Secale cereale cultivar Musketeer REP13 mRNA, complete cds Length = 700 Score = 73.8 bits (37), Expect = 3e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 121 ccgcggcggcgaccttgtccgtgatgccctgtgcggcgtccttggcgccgtcccacgcct 180 |||||||||| || ||||| | || |||||| ||||| ||||||| | |||||||||||| Sbjct: 463 ccgcggcggccacgttgtcggcgacgccctgcgcggcctccttggtggcgtcccacgcct 404 Query: 181 cctccgtcgccttcttggcct 201 |||| ||||||| |||||||| Sbjct: 403 cctcagtcgcctgcttggcct 383
>gb|AF491838.1| Triticum aestivum cultivar Fredrick WCOR14a mRNA, complete cds Length = 645 Score = 69.9 bits (35), Expect = 5e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 146 gccctgtgcggcgtccttggcgccgtcccacgcctcctccgtcgccttcttggcctgctc 205 |||||| |||||||| |||| | | |||||||||||||||||||||| ||| |||| ||| Sbjct: 378 gccctgcgcggcgtctttggtggcatcccacgcctcctccgtcgcctgcttcgccttctc 319 Query: 206 cgcgaggtccttggc 220 ||||||||||||| Sbjct: 318 gccgaggtccttggc 304
>gb|AF207545.1|AF207545 Triticum aestivum cultivar Mironovska 808 cold-responsive protein COR14a (cor14a) mRNA, complete cds Length = 638 Score = 69.9 bits (35), Expect = 5e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 146 gccctgtgcggcgtccttggcgccgtcccacgcctcctccgtcgccttcttggcctgctc 205 |||||| |||||||| |||| | | |||||||||||||||||||||| ||| |||| ||| Sbjct: 443 gccctgcgcggcgtctttggtggcatcccacgcctcctccgtcgcctgcttcgccttctc 384 Query: 206 cgcgaggtccttggc 220 ||||||||||||| Sbjct: 383 gccgaggtccttggc 369
>gb|AF207546.1|AF207546 Triticum aestivum cultivar Mironovska 808 cold-responsive protein COR14b (cor14b) mRNA, complete cds Length = 576 Score = 63.9 bits (32), Expect = 3e-07 Identities = 84/100 (84%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 121 ccgcggcggcgaccttgtccgtgatgccctgtgcggcgtccttggcgccgtcccacgcct 180 ||||||||| ||| | ||| | || ||||||||||||||| |||| | ||||||||| || Sbjct: 475 ccgcggcggtgacgtcgtcggcgacgccctgtgcggcgtctttggtggcgtcccacg-ct 417 Query: 181 cctccgtcgccttcttggcctgctccgcgaggtccttggc 220 |||||||||||| ||| |||| ||| | ||||||||||| Sbjct: 416 cctccgtcgcctgcttcgccttctcgcccaggtccttggc 377
>ref|XM_472871.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 Score = 46.1 bits (23), Expect = 0.072 Identities = 26/27 (96%) Strand = Plus / Minus Query: 291 tccgccgcctccgccacgcccttcttc 317 ||||||||||||||| ||||||||||| Sbjct: 401 tccgccgcctccgccgcgcccttcttc 375
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 46.1 bits (23), Expect = 0.072 Identities = 26/27 (96%) Strand = Plus / Minus Query: 291 tccgccgcctccgccacgcccttcttc 317 ||||||||||||||| ||||||||||| Sbjct: 153261 tccgccgcctccgccgcgcccttcttc 153235
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.072 Identities = 26/27 (96%) Strand = Plus / Minus Query: 291 tccgccgcctccgccacgcccttcttc 317 ||||||||||||||| ||||||||||| Sbjct: 23832349 tccgccgcctccgccgcgcccttcttc 23832323 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 cggcctccgccgcctccgcc 305 |||||||||||||||||||| Sbjct: 26410897 cggcctccgccgcctccgcc 26410878
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 gtcgtccacctcggtcgcgcccttcc 249 |||| ||||||||||||||||||||| Sbjct: 12 gtcggccacctcggtcgcgcccttcc 37
>ref|XM_476719.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2457 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gcggcgtccttggcgccgtcc 173 ||||||||||||||||||||| Sbjct: 1460 gcggcgtccttggcgccgtcc 1440
>gb|AC099007.2| Drosophila melanogaster clone BACR16B07, complete sequence Length = 172393 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 1444 gcctccgccgcctccgccacg 1424
>gb|AC008231.4| Drosophila melanogaster clone BACR12O13, complete sequence Length = 177339 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 118292 gcctccgccgcctccgccacg 118272
>gb|AY382628.1| Drosophila melanogaster strain Raleigh Inbred 9 xeroderma pigmentosum D (Xpd) gene, partial cds; and punch (Pu) gene, complete cds Length = 11690 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 4197 gcctccgccgcctccgccacg 4217
>gb|AY382627.1| Drosophila melanogaster strain Raleigh Inbred 7 xeroderma pigmentosum D (Xpd) gene, partial cds; and punch-like (Pu) gene, complete sequence Length = 11679 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 4200 gcctccgccgcctccgccacg 4220
>gb|AY382626.1| Drosophila melanogaster strain Raleigh Inbred 6 xeroderma pigmentosum D (Xpd) gene, partial cds; and punch (Pu) gene, complete cds Length = 11687 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 4197 gcctccgccgcctccgccacg 4217
>gb|AY382625.1| Drosophila melanogaster strain Raleigh Inbred 33 xeroderma pigmentosum D (Xpd) gene, partial cds; and punch (Pu) gene, complete cds Length = 11698 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 4197 gcctccgccgcctccgccacg 4217
>gb|AY382624.1| Drosophila melanogaster strain Raleigh Inbred 30 xeroderma pigmentosum D-like (Xpd) gene, partial sequence; and punch (Pu) gene, complete cds Length = 11695 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 4194 gcctccgccgcctccgccacg 4214
>gb|AY382623.1| Drosophila melanogaster strain Raleigh Inbred 27 xeroderma pigmentosum D (Xpd) gene, partial cds; and punch (Pu) gene, complete cds Length = 11702 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 4203 gcctccgccgcctccgccacg 4223
>gb|AY382622.1| Drosophila melanogaster strain Raleigh Inbred 24 xeroderma pigmentosum D (Xpd) gene, partial cds; and punch (Pu) gene, complete cds Length = 11676 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 4196 gcctccgccgcctccgccacg 4216
>gb|AY382621.1| Drosophila melanogaster strain Raleigh Inbred 16 xeroderma pigmentosum D-like (Xpd) gene, partial sequence; and punch-like (Pu) gene, complete sequence Length = 11670 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 4195 gcctccgccgcctccgccacg 4215
>gb|AY382620.1| Drosophila melanogaster strain Raleigh Inbred 11 xeroderma pigmentosum D (Xpd) gene, partial cds; and punch (Pu) gene, complete cds Length = 11651 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 4195 gcctccgccgcctccgccacg 4215
>gb|AY382619.1| Drosophila melanogaster strain Raleigh Inbred 1 xeroderma pigmentosum D (Xpd) gene, partial cds; and punch (Pu) gene, complete cds Length = 11704 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 4196 gcctccgccgcctccgccacg 4216
>emb|Z99117.2|BSUB0014 Bacillus subtilis complete genome (section 14 of 21): from 2613658 to 2812830 Length = 199173 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 acggcctccgccgcctccgcc 305 ||||||||||||||||||||| Sbjct: 183834 acggcctccgccgcctccgcc 183854
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 acgcccttcttcagctcgtcg 326 ||||||||||||||||||||| Sbjct: 1004140 acgcccttcttcagctcgtcg 1004160 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gcctccgccgcctccgccac 307 |||||||||||||||||||| Sbjct: 3272316 gcctccgccgcctccgccac 3272297
>ref|NM_166430.1| Drosophila melanogaster Punch CG9441-RB, transcript variant B (Pu), mRNA Length = 1631 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 252 gcctccgccgcctccgccacg 272
>gb|U01118.1| Drosophila melanogaster GTP cyclohydrolase I (Pu) mRNA, complete cds Length = 1627 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 252 gcctccgccgcctccgccacg 272
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 gcggcgtccttggcgccgtcc 173 ||||||||||||||||||||| Sbjct: 3519312 gcggcgtccttggcgccgtcc 3519332
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 gcggcgtccttggcgccgtcc 173 ||||||||||||||||||||| Sbjct: 57262 gcggcgtccttggcgccgtcc 57282
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 ccacctcggtcgcgcccttcc 249 ||||||||||||||||||||| Sbjct: 17 ccacctcggtcgcgcccttcc 37
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 ccacctcggtcgcgcccttcc 249 ||||||||||||||||||||| Sbjct: 17 ccacctcggtcgcgcccttcc 37
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 ccacctcggtcgcgcccttcc 249 ||||||||||||||||||||| Sbjct: 17 ccacctcggtcgcgcccttcc 37
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 ccacctcggtcgcgcccttcc 249 ||||||||||||||||||||| Sbjct: 17 ccacctcggtcgcgcccttcc 37
>gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61 of 73 of the complete sequence Length = 305143 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccacg 308 ||||||||||||||||||||| Sbjct: 87317 gcctccgccgcctccgccacg 87337
>ref|XM_475981.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2511 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cggcgtccttggcgccgtcc 173 |||||||||||||||||||| Sbjct: 364 cggcgtccttggcgccgtcc 345
>ref|XM_450887.1| Oryza sativa (japonica cultivar-group), mRNA Length = 729 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgtccacctcggtcgcgccc 245 |||||||||||||||||||| Sbjct: 523 cgtccacctcggtcgcgccc 504
>ref|XM_473261.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 531 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 cggcctccgccgcctccgcc 305 |||||||||||||||||||| Sbjct: 90 cggcctccgccgcctccgcc 71
>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0096A19 map near 50283S, complete sequence Length = 139969 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gcctccgccgcctccgccac 307 |||||||||||||||||||| Sbjct: 14012 gcctccgccgcctccgccac 13993
>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057M18 map near E10005S, complete sequence Length = 140920 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gcctccgccgcctccgccac 307 |||||||||||||||||||| Sbjct: 134262 gcctccgccgcctccgccac 134243
>gb|AC008228.5| Drosophila melanogaster clone BACR23E23, complete sequence Length = 162949 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tccttcttggccgcggcggc 130 |||||||||||||||||||| Sbjct: 81458 tccttcttggccgcggcggc 81477
>gb|AC010123.9| Drosophila melanogaster clone BACR35O22, complete sequence Length = 160444 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tccttcttggccgcggcggc 130 |||||||||||||||||||| Sbjct: 27545 tccttcttggccgcggcggc 27564
>ref|XM_322398.1| Neurospora crassa OR74A predicted protein (NCU00313.1) partial mRNA Length = 1182 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccac 307 |||||||||||||||||||| Sbjct: 179 gcctccgccgcctccgccac 198
>ref|XM_952691.1| Neurospora crassa OR74A hypothetical protein (NCU00313.1) partial mRNA Length = 1182 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccac 307 |||||||||||||||||||| Sbjct: 179 gcctccgccgcctccgccac 198
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cggcgtccttggcgccgtcc 173 |||||||||||||||||||| Sbjct: 26828 cggcgtccttggcgccgtcc 26809
>gb|BT011530.1| Drosophila melanogaster RE20733 full insert cDNA Length = 623 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ccgtcgccttcttggcctgc 203 |||||||||||||||||||| Sbjct: 69 ccgtcgccttcttggcctgc 88
>ref|XM_994211.1| PREDICTED: Mus musculus RIKEN cDNA 1810043H04 gene (1810043H04Rik), mRNA Length = 717 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cttcttggccgcggcggcga 132 |||||||||||||||||||| Sbjct: 252 cttcttggccgcggcggcga 233
>ref|XM_924690.2| PREDICTED: Mus musculus RIKEN cDNA 1810043H04 gene, transcript variant 4 (1810043H04Rik), mRNA Length = 717 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cttcttggccgcggcggcga 132 |||||||||||||||||||| Sbjct: 252 cttcttggccgcggcggcga 233
>ref|XM_903145.2| PREDICTED: Mus musculus RIKEN cDNA 1810043H04 gene, transcript variant 2 (1810043H04Rik), mRNA Length = 717 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cttcttggccgcggcggcga 132 |||||||||||||||||||| Sbjct: 252 cttcttggccgcggcggcga 233
>ref|XM_861531.1| PREDICTED: Canis familiaris similar to Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X), transcript variant 2 (LOC485732), mRNA Length = 873 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 ccgacacggcctccgccgcctccg 303 ||||| |||||||||||||||||| Sbjct: 749 ccgactcggcctccgccgcctccg 772
>ref|XM_542854.2| PREDICTED: Canis familiaris similar to Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X), transcript variant 1 (LOC485732), mRNA Length = 909 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 ccgacacggcctccgccgcctccg 303 ||||| |||||||||||||||||| Sbjct: 785 ccgactcggcctccgccgcctccg 808
>ref|XM_843876.1| PREDICTED: Canis familiaris hypothetical LOC479209, transcript variant 2 (LOC479209), mRNA Length = 1409 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 cggcctccgccgcctccgcc 305 |||||||||||||||||||| Sbjct: 355 cggcctccgccgcctccgcc 336
>emb|AL512343.21| Human DNA sequence from clone RP11-396C23 on chromosome 1 Contains the H3F3A gene for H3 histone, family 3A, a nove gene and four CpG islands, complete sequence Length = 105087 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cttcttggccgcggcggcga 132 |||||||||||||||||||| Sbjct: 102579 cttcttggccgcggcggcga 102560
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 tggccgcggcggcgaccttgtccg 141 ||||||||||||||||| |||||| Sbjct: 3682213 tggccgcggcggcgaccatgtccg 3682190
>gb|BT010107.1| Drosophila melanogaster GH05223 full insert cDNA Length = 5501 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tccttcttggccgcggcggc 130 |||||||||||||||||||| Sbjct: 4143 tccttcttggccgcggcggc 4124
>gb|AF529189.1| Drosophila melanogaster protein tyrosine phosphatase-like protein (Phogrin) mRNA, partial cds Length = 3180 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tccttcttggccgcggcggc 130 |||||||||||||||||||| Sbjct: 1958 tccttcttggccgcggcggc 1939
>emb|Y07706.1|SCMALREFG S.coelicolor malR, malE, malF and malG genes Length = 5010 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ccttcttggccgcggcggcg 131 |||||||||||||||||||| Sbjct: 2298 ccttcttggccgcggcggcg 2279
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 ttcctccacggccttgtcggtgtt 277 |||| ||||||||||||||||||| Sbjct: 218526 ttcccccacggccttgtcggtgtt 218503
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccttcttggccgcggcggcg 131 |||||||||||||||||||| Sbjct: 297581 ccttcttggccgcggcggcg 297600
>gb|AY741581.1| Uncultured sulfate-reducing bacterium clone PIMO1D01 dissimilatory sulfite reductase alpha subunit (dsrA) and dissimilatory sulfite reductase beta subunit (dsrB) genes, partial cds Length = 1922 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ccttggccttgtcgtccacc 233 |||||||||||||||||||| Sbjct: 1456 ccttggccttgtcgtccacc 1437
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ggccttgtcggtgttgcccg 282 |||||||||||||||||||| Sbjct: 3290149 ggccttgtcggtgttgcccg 3290130
>gb|AY128428.1| Drosophila melanogaster GH26549 full insert cDNA Length = 3209 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tccttcttggccgcggcggc 130 |||||||||||||||||||| Sbjct: 1958 tccttcttggccgcggcggc 1939
>gb|DQ397569.1| Cenarchaeum symbiosum clone C07D08, complete sequence Length = 43141 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gcctccgccgcctccgccac 307 |||||||||||||||||||| Sbjct: 33172 gcctccgccgcctccgccac 33153
>ref|NM_166220.1| Drosophila melanogaster CG30458-RA (CG30458), mRNA Length = 602 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ccgtcgccttcttggcctgc 203 |||||||||||||||||||| Sbjct: 69 ccgtcgccttcttggcctgc 88
>ref|NM_164401.3| Drosophila melanogaster ia2 CG31795-RB, transcript variant B (ia2), mRNA Length = 5504 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tccttcttggccgcggcggc 130 |||||||||||||||||||| Sbjct: 4143 tccttcttggccgcggcggc 4124
>ref|NM_134718.4| Drosophila melanogaster ia2 CG31795-RA, transcript variant A (ia2), mRNA Length = 5391 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tccttcttggccgcggcggc 130 |||||||||||||||||||| Sbjct: 4156 tccttcttggccgcggcggc 4137
>gb|AC099329.2| Homo sapiens chromosome 3 clone RP11-70C1, complete sequence Length = 167667 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ttgtcagcttagctttagct 106 |||||||||||||||||||| Sbjct: 59765 ttgtcagcttagctttagct 59746
>ref|XM_928415.1| PREDICTED: Homo sapiens DKFZP434B061 protein (DKFZP434B061), mRNA Length = 6180 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 gtgatgccctgtgcggcgtccttg 164 ||||||||||| |||||||||||| Sbjct: 2677 gtgatgccctgggcggcgtccttg 2654
>gb|AF126741.1|AF126741 Drosophila melanogaster IA2 (ia2) mRNA, partial cds Length = 2200 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tccttcttggccgcggcggc 130 |||||||||||||||||||| Sbjct: 1188 tccttcttggccgcggcggc 1169
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tggccgcggcggcgaccttg 137 |||||||||||||||||||| Sbjct: 2241493 tggccgcggcggcgaccttg 2241512
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 tcttggcctgctccgcgaggtcct 216 ||||| |||||||||||||||||| Sbjct: 243560 tcttgacctgctccgcgaggtcct 243537
>ref|NM_001021343.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC1709.02c), partial mRNA Length = 2943 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 gcctcctccgtcgccttcttggcc 200 ||||||||| |||||||||||||| Sbjct: 167 gcctcctccttcgccttcttggcc 144
>dbj|AK010111.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310068J07 product:RIKEN cDNA 1810043H04 gene, full insert sequence Length = 451 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cttcttggccgcggcggcga 132 |||||||||||||||||||| Sbjct: 250 cttcttggccgcggcggcga 231
>dbj|AK007756.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810043H04 product:unclassifiable, full insert sequence Length = 490 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cttcttggccgcggcggcga 132 |||||||||||||||||||| Sbjct: 250 cttcttggccgcggcggcga 231
>gb|AC005713.8|AC005713 Drosophila melanogaster, chromosome 2R, region 54A1-54B2, BAC clone BACR48A11, complete sequence Length = 157507 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ccgtcgccttcttggcctgc 203 |||||||||||||||||||| Sbjct: 17885 ccgtcgccttcttggcctgc 17866
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ccgcctccgccacgcccttc 314 |||||||||||||||||||| Sbjct: 26827304 ccgcctccgccacgcccttc 26827285
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gcctccgccgcctccgccac 307 |||||||||||||||||||| Sbjct: 13776453 gcctccgccgcctccgccac 13776434
>gb|AC007520.8|AC007520 Drosophila melanogaster, chromosome 2R, region 53D-54A, BAC clone BACR11M15, complete sequence Length = 170994 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ccgtcgccttcttggcctgc 203 |||||||||||||||||||| Sbjct: 90523 ccgtcgccttcttggcctgc 90504
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtccacctcggtcgcgccc 245 |||||||||||||||||||| Sbjct: 13523494 cgtccacctcggtcgcgccc 13523513
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cggcgtccttggcgccgtcc 173 |||||||||||||||||||| Sbjct: 29016773 cggcgtccttggcgccgtcc 29016754
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 acacggcctccgccgcctcc 302 |||||||||||||||||||| Sbjct: 33817058 acacggcctccgccgcctcc 33817077
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 cttcttggccgcggcggcgacctt 136 |||||||||| ||||||||||||| Sbjct: 2600489 cttcttggccccggcggcgacctt 2600466
>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0691E06 Length = 166497 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 acacggcctccgccgcctcc 302 |||||||||||||||||||| Sbjct: 56105 acacggcctccgccgcctcc 56124
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ttcttggccgcggcggcgac 133 |||||||||||||||||||| Sbjct: 1098602 ttcttggccgcggcggcgac 1098621
>dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1175F05 Length = 126842 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtccacctcggtcgcgccc 245 |||||||||||||||||||| Sbjct: 98422 cgtccacctcggtcgcgccc 98441
>emb|AL356585.7| Human DNA sequence from clone RP11-341D18 on chromosome 22, complete sequence Length = 186858 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 gtgatgccctgtgcggcgtccttg 164 ||||||||||| |||||||||||| Sbjct: 63688 gtgatgccctgggcggcgtccttg 63665
>dbj|AP002543.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F15M7 Length = 74350 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 agcttagctttagctagctt 111 |||||||||||||||||||| Sbjct: 519 agcttagctttagctagctt 538
>emb|AJ009579.2|PFL9579 Pseudomonas fluorescens strain CHA0, estF1, alkB, praA, praB, OmpP1 and yafH genes Length = 7810 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ggccttgtcggtgttgcccg 282 |||||||||||||||||||| Sbjct: 7327 ggccttgtcggtgttgcccg 7308
>gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46 of 73 of the complete sequence Length = 260337 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ccgtcgccttcttggcctgc 203 |||||||||||||||||||| Sbjct: 153648 ccgtcgccttcttggcctgc 153629
>gb|AE003587.4| Drosophila melanogaster chromosome 2L, section 4 of 83 of the complete sequence Length = 314549 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tccttcttggccgcggcggc 130 |||||||||||||||||||| Sbjct: 93813 tccttcttggccgcggcggc 93832
>emb|Y18523.4|ASY18523 Actinoplanes sp. SE50/110 complete acarbose (acb) gene cluster, strain SE50/110 Length = 41323 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccttcttggccgcggcggcg 131 |||||||||||||||||||| Sbjct: 36271 ccttcttggccgcggcggcg 36290
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gcctccgccgcctccgccac 307 |||||||||||||||||||| Sbjct: 1574686 gcctccgccgcctccgccac 1574667
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gcctccgccgcctccgccac 307 |||||||||||||||||||| Sbjct: 13858455 gcctccgccgcctccgccac 13858436
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ccgcctccgccacgcccttc 314 |||||||||||||||||||| Sbjct: 26755474 ccgcctccgccacgcccttc 26755455
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 cggcctccgccgcctccgcc 305 |||||||||||||||||||| Sbjct: 51530 cggcctccgccgcctccgcc 51511
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142370 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ccgcctccgccacgcccttc 314 |||||||||||||||||||| Sbjct: 31271 ccgcctccgccacgcccttc 31252
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gcctccgccgcctccgccac 307 |||||||||||||||||||| Sbjct: 1237713 gcctccgccgcctccgccac 1237732
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gcctccgccgcctccgccac 307 |||||||||||||||||||| Sbjct: 410212 gcctccgccgcctccgccac 410193
>gb|M62957.1|ZMOPGIG Zymomonas mobilis phosphoglucoseisomerase gene, complete cds Length = 3212 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gcctccgccgcctccgccac 307 |||||||||||||||||||| Sbjct: 572 gcctccgccgcctccgccac 553 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,166,039 Number of Sequences: 3902068 Number of extensions: 2166039 Number of successful extensions: 65159 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63428 Number of HSP's gapped (non-prelim): 1729 length of query: 334 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 312 effective length of database: 17,147,199,772 effective search space: 5349926328864 effective search space used: 5349926328864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
