ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4i10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483802.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 95.6 bits (48), Expect = 2e-16 Identities = 129/156 (82%) Strand = Plus / Minus Query: 326 gagaggtttggttgcttcggtgccaccccacttttggacacggcttgaagctagcgcagc 385 ||||||||||||| | || ||||| |||||||| || ||||| ||||||| ||||||| Sbjct: 1336 gagaggtttggtttcatctgtgcctccccacttgtgcacacgagctgaagcttgcgcagc 1277 Query: 386 ctctgtgttccagtctgttctccacactatgacgagtaaaatcaatgtctgaagtccaac 445 ||||| ||||||||||||||||| |||| | ||||| ||| | ||| |||||| |||| Sbjct: 1276 ctctgccttccagtctgttctccagactacaaagagtagaatgagtgtttgaagtgcaac 1217 Query: 446 cccgcaaagcatgccagcccaaatccccccaactcc 481 || || ||||||||| |||||| |||||| ||||| Sbjct: 1216 tccacagagcatgccaccccaaacccccccgactcc 1181
>dbj|AK103815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147C23, full insert sequence Length = 1597 Score = 95.6 bits (48), Expect = 2e-16 Identities = 129/156 (82%) Strand = Plus / Minus Query: 326 gagaggtttggttgcttcggtgccaccccacttttggacacggcttgaagctagcgcagc 385 ||||||||||||| | || ||||| |||||||| || ||||| ||||||| ||||||| Sbjct: 1336 gagaggtttggtttcatctgtgcctccccacttgtgcacacgagctgaagcttgcgcagc 1277 Query: 386 ctctgtgttccagtctgttctccacactatgacgagtaaaatcaatgtctgaagtccaac 445 ||||| ||||||||||||||||| |||| | ||||| ||| | ||| |||||| |||| Sbjct: 1276 ctctgccttccagtctgttctccagactacaaagagtagaatgagtgtttgaagtgcaac 1217 Query: 446 cccgcaaagcatgccagcccaaatccccccaactcc 481 || || ||||||||| |||||| |||||| ||||| Sbjct: 1216 tccacagagcatgccaccccaaacccccccgactcc 1181
>gb|AY107628.1| Zea mays PCO087035 mRNA sequence Length = 754 Score = 77.8 bits (39), Expect = 4e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 450 caaagcatgccagcccaaatccccccaactccatagttgaacttgtagccgaggagatat 509 ||||||||||| | ||||||||||||||||||| || |||||||||| ||||| | || Sbjct: 274 caaagcatgccggaccaaatccccccaactccaaagctgaacttgtatccgagcaagtag 215 Query: 510 cccaatggcaatccgaaaatgtagtagcaaccaaggttgatgtatgcaacaaggccttgc 569 |||| |||| ||||| || |||||||| || ||||||||||| || || ||||| ||| Sbjct: 214 cccaggggcaggccgaagatatagtagcagccgaggttgatgtaggcgacgaggccctgc 155 Query: 570 cat 572 ||| Sbjct: 154 cat 152 Score = 48.1 bits (24), Expect = 0.032 Identities = 54/64 (84%) Strand = Plus / Minus Query: 346 tgccaccccacttttggacacggcttgaagctagcgcagcctctgtgttccagtctgttc 405 |||| ||||||||||| ||||||| ||||||| | || ||||||| ||||| ||||| | Sbjct: 378 tgccgccccacttttgcacacggcctgaagcttgtgcggcctctgctttccaatctgtcc 319 Query: 406 tcca 409 |||| Sbjct: 318 tcca 315
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 1 ttagtacaaattttgtactaaaacagcgacatttattttaaaacagagggagta 54 |||||| ||||||| |||||||||||| ||| ||||||||| || |||||||| Sbjct: 40572 ttagtataaattttatactaaaacagcaacacttattttaaggcaaagggagta 40519
>ref|XM_483803.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1635 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Minus Query: 393 ttccagtctgttctccacactatgacgagtaaaatcaatgtctgaagtccaaccccgcaa 452 ||||||||||||||||| |||| | ||||| ||| | ||| |||||| |||| || || Sbjct: 1557 ttccagtctgttctccagactacaaagagtagaatgagtgtttgaagtgcaactccacag 1498 Query: 453 agcatgccagcccaaatcccc 473 ||||||||| |||||| |||| Sbjct: 1497 agcatgccaccccaaaccccc 1477
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 393 ttccagtctgttctccacactatgacgagtaaaatcaatgtctgaagtccaaccccgcaa 452 ||||||||||||||||| |||| | ||||| ||| | ||| |||||| |||| || || Sbjct: 28177068 ttccagtctgttctccagactacaaagagtagaatgagtgtttgaagtgcaactccacag 28177127 Query: 453 agcatgccagcccaaatcccc 473 ||||||||| |||||| |||| Sbjct: 28177128 agcatgccaccccaaaccccc 28177148 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 326 gagaggtttggttgcttcggtgccaccccacttttggacacggcttgaagctagcgcagc 385 ||||||||||||| | || ||||| |||||||| || ||||| ||||||| ||||||| Sbjct: 28176890 gagaggtttggtttcatctgtgcctccccacttgtgcacacgagctgaagcttgcgcagc 28176949 Query: 386 ct 387 || Sbjct: 28176950 ct 28176951 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 19217691 tattttaaaacagagggagta 19217671 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 tattttaaaacagagggagtaacat 58 ||||||||||| ||||||||||||| Sbjct: 3641801 tattttaaaacggagggagtaacat 3641777 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 32 tttattttaaaacagagggagtaacatt 59 ||||||||| ||| |||||||||||||| Sbjct: 20417971 tttattttagaacggagggagtaacatt 20417944 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 acagagggagtaacatttag 62 |||||||||||||||||||| Sbjct: 18909161 acagagggagtaacatttag 18909142
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 393 ttccagtctgttctccacactatgacgagtaaaatcaatgtctgaagtccaaccccgcaa 452 ||||||||||||||||| |||| | ||||| ||| | ||| |||||| |||| || || Sbjct: 60541 ttccagtctgttctccagactacaaagagtagaatgagtgtttgaagtgcaactccacag 60600 Query: 453 agcatgccagcccaaatcccc 473 ||||||||| |||||| |||| Sbjct: 60601 agcatgccaccccaaaccccc 60621 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 326 gagaggtttggttgcttcggtgccaccccacttttggacacggcttgaagctagcgcagc 385 ||||||||||||| | || ||||| |||||||| || ||||| ||||||| ||||||| Sbjct: 60363 gagaggtttggtttcatctgtgcctccccacttgtgcacacgagctgaagcttgcgcagc 60422 Query: 386 ct 387 || Sbjct: 60423 ct 60424
>dbj|AK105950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C12, full insert sequence Length = 1635 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Minus Query: 393 ttccagtctgttctccacactatgacgagtaaaatcaatgtctgaagtccaaccccgcaa 452 ||||||||||||||||| |||| | ||||| ||| | ||| |||||| |||| || || Sbjct: 1557 ttccagtctgttctccagactacaaagagtagaatgagtgtttgaagtgcaactccacag 1498 Query: 453 agcatgccagcccaaatcccc 473 ||||||||| |||||| |||| Sbjct: 1497 agcatgccaccccaaaccccc 1477
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1 ttagtacaaattttgtactaaaacagcg 28 |||||||||||||||||||||| ||||| Sbjct: 49041 ttagtacaaattttgtactaaagcagcg 49068
>gb|AC119412.16| Medicago truncatula clone mth2-31d18, complete sequence Length = 120757 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 27 cgacatttattttaaaacagagggagta 54 ||||||| |||||||||||||||||||| Sbjct: 55557 cgacattcattttaaaacagagggagta 55584
>gb|AC149134.2| Medicago truncatula, complete sequence Length = 133336 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 27 cgacatttattttaaaacagagggagta 54 |||||||||||||||||| ||||||||| Sbjct: 100423 cgacatttattttaaaacggagggagta 100396
>gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0071K13, complete sequence Length = 176150 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagtaacattt 60 |||||| |||||||||||||||||||| Sbjct: 86576 tattttgaaacagagggagtaacattt 86602
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 33 ttattttaaaacagagggagtaa 55 ||||||||||||||||||||||| Sbjct: 84135 ttattttaaaacagagggagtaa 84157
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagtaacattt 60 |||||| |||||||||||||||||||| Sbjct: 14976789 tattttgaaacagagggagtaacattt 14976815 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 21165635 tattttaaaacagagggagta 21165615 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 34 tattttaaaacagagggagtaacattta 61 |||||| |||| |||||||||||||||| Sbjct: 6592184 tattttgaaacggagggagtaacattta 6592157
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 33 ttattttaaaacagagggagtaa 55 ||||||||||||||||||||||| Sbjct: 12564048 ttattttaaaacagagggagtaa 12564070 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attttaaaacagagggagta 54 |||||||||||||||||||| Sbjct: 21847403 attttaaaacagagggagta 21847422
>gb|AC108005.8| Homo sapiens chromosome 11, clone CTD-2515M10, complete sequence Length = 165443 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 ttagtacaaattttgtactaaaa 23 ||||||||||||||||||||||| Sbjct: 26773 ttagtacaaattttgtactaaaa 26751
>emb|CT033763.2| Medicago truncatula chromosome 5 clone mth2-139a2, COMPLETE SEQUENCE Length = 132108 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 35 attttaaaacagagggagtaaca 57 ||||||||||||||||||||||| Sbjct: 31631 attttaaaacagagggagtaaca 31653
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 33 ttattttaaaacagagggagtaa 55 ||||||||||||||||||||||| Sbjct: 12571388 ttattttaaaacagagggagtaa 12571410 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attttaaaacagagggagta 54 |||||||||||||||||||| Sbjct: 21859066 attttaaaacagagggagta 21859085
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagtaacattt 60 |||||| |||||||||||||||||||| Sbjct: 15058484 tattttgaaacagagggagtaacattt 15058510 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 21475876 tattttaaaacagagggagta 21475856 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 34 tattttaaaacagagggagtaacattta 61 |||||| |||| |||||||||||||||| Sbjct: 6658651 tattttgaaacggagggagtaacattta 6658624
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagtaa 55 |||||||||||||||||||||| Sbjct: 1237608 tattttaaaacagagggagtaa 1237629 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 31 atttattttaaaacagagggagtaa 55 ||||||||||||||||||| ||||| Sbjct: 25895340 atttattttaaaacagaggaagtaa 25895316 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 11415392 tattttaaaacagagggagta 11415412 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 attttaaaacagagggagtaacat 58 |||||||||| ||||||||||||| Sbjct: 30018975 attttaaaacggagggagtaacat 30018952 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attttaaaacagagggagta 54 |||||||||||||||||||| Sbjct: 26887149 attttaaaacagagggagta 26887168 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ttattttaaaacagagggag 52 |||||||||||||||||||| Sbjct: 11956000 ttattttaaaacagagggag 11955981
>gb|AC147501.9| Medicago truncatula clone mth2-12n2, complete sequence Length = 140523 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 28 gacatttattttaaaacagagggagtaacattta 61 ||||| |||||| |||| |||||||||||||||| Sbjct: 15004 gacatgtattttgaaacggagggagtaacattta 15037
>gb|AC156629.26| Medicago truncatula clone mth2-143f17, complete sequence Length = 130456 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 35 attttaaaacagagggagtaacattt 60 |||||||||| ||||||||||||||| Sbjct: 118159 attttaaaacggagggagtaacattt 118134
>gb|AC140022.11| Medicago truncatula clone mth2-11g20, complete sequence Length = 104305 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 35 attttaaaacagagggagtaacattt 60 |||||||||| ||||||||||||||| Sbjct: 94623 attttaaaacggagggagtaacattt 94648
>gb|AC152421.8| Medicago truncatula clone mth2-7h20, complete sequence Length = 127540 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 25 agcgacatttattttaaaacagagggagta 54 ||||||||| ||||| |||||||||||||| Sbjct: 40460 agcgacattcattttgaaacagagggagta 40431
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 ttattttaaaacagagggagta 54 |||||||||||||||||||||| Sbjct: 27932 ttattttaaaacagagggagta 27953
>gb|AC146333.35| Medicago truncatula clone mth2-8d3, complete sequence Length = 122694 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 ttattttaaaacagagggagta 54 |||||||||||||||||||||| Sbjct: 24431 ttattttaaaacagagggagta 24452
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 ttattttaaaacagagggagta 54 |||||||||||||||||||||| Sbjct: 4658589 ttattttaaaacagagggagta 4658610 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 1213239 tattttaaaacagagggagta 1213259
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagtaa 55 |||||||||||||||||||||| Sbjct: 1237606 tattttaaaacagagggagtaa 1237627 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 31 atttattttaaaacagagggagtaa 55 ||||||||||||||||||| ||||| Sbjct: 25986649 atttattttaaaacagaggaagtaa 25986625 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 11412155 tattttaaaacagagggagta 11412175 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 attttaaaacagagggagtaacat 58 |||||||||| ||||||||||||| Sbjct: 30110397 attttaaaacggagggagtaacat 30110374 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attttaaaacagagggagta 54 |||||||||||||||||||| Sbjct: 26978472 attttaaaacagagggagta 26978491 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ttattttaaaacagagggag 52 |||||||||||||||||||| Sbjct: 11952763 ttattttaaaacagagggag 11952744
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagtaa 55 |||||||||||||||||||||| Sbjct: 9699755 tattttaaaacagagggagtaa 9699776 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 25661601 tattttaaaacagagggagta 25661621 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attttaaaacagagggagta 54 |||||||||||||||||||| Sbjct: 42050235 attttaaaacagagggagta 42050216 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 tttattttaaaacagagggagtaa 55 |||||||||||| ||||||||||| Sbjct: 5679919 tttattttaaaatagagggagtaa 5679896
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagtaa 55 |||||||||||||||||||||| Sbjct: 137758 tattttaaaacagagggagtaa 137779
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12, complete sequence Length = 146241 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagtaa 55 |||||||||||||||||||||| Sbjct: 42510 tattttaaaacagagggagtaa 42531
>gb|AC099707.14| Mus musculus chromosome 1, clone RP23-329C7, complete sequence Length = 204557 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 agaggtttggttgcttcggtg 347 ||||||||||||||||||||| Sbjct: 32733 agaggtttggttgcttcggtg 32713
>gb|AC169813.2| Rhesus Macaque BAC CH250-16M3 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 168861 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 cagcctctgtgttccagtctg 402 ||||||||||||||||||||| Sbjct: 29043 cagcctctgtgttccagtctg 29063
>gb|AC079021.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0008A07, complete sequence Length = 135809 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 8052 tattttaaaacagagggagta 8072
>gb|AC004622.1| Homo sapiens chromosome 5, PAC clone 170m10 (LBNL H89), complete sequence Length = 85181 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 tgcttatgtgatctaattctc 319 ||||||||||||||||||||| Sbjct: 19752 tgcttatgtgatctaattctc 19732
>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0060K21, complete sequence Length = 153973 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 47794 tattttaaaacagagggagta 47774
>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete sequence Length = 140720 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 atttattttaaaacagagggagtaa 55 ||||||||||||||||||| ||||| Sbjct: 112580 atttattttaaaacagaggaagtaa 112604
>gb|AE004145.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 53 of 251 of the complete chromosome Length = 10372 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 tctcataccctgttgatgtttgata 217 ||||||||||| ||||||||||||| Sbjct: 8025 tctcataccctcttgatgtttgata 8049
>gb|AC144765.19| Medicago truncatula clone mth2-35o11, complete sequence Length = 130836 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 aaacagagggagtaacattta 61 ||||||||||||||||||||| Sbjct: 16678 aaacagagggagtaacattta 16698
>gb|AC125473.12| Medicago truncatula clone mth2-8j13, complete sequence Length = 103966 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 27 cgacatttattttaaaacagagggagtaa 55 |||||||||||||||||| || ||||||| Sbjct: 85897 cgacatttattttaaaacggatggagtaa 85925
>gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete sequence Length = 133305 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 27 cgacatttattttaaaacagagggagtaa 55 ||||| ||||||||||||||| ||||||| Sbjct: 89038 cgacacttattttaaaacagaaggagtaa 89066
>gb|AC126014.6| Medicago truncatula clone mth2-18j5, complete sequence Length = 113200 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 27 cgacatttattttaaaacagagggagtaa 55 |||||||||||||||||| || ||||||| Sbjct: 13741 cgacatttattttaaaacggatggagtaa 13713
>gb|AC149304.11| Medicago truncatula clone mth2-76g4, complete sequence Length = 114831 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 attttaaaacagagggagtaa 55 ||||||||||||||||||||| Sbjct: 16518 attttaaaacagagggagtaa 16498
>gb|AC146854.19| Medicago truncatula clone mth2-10i14, complete sequence Length = 116179 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 28 gacatttattttaaaacagagggagtaacattt 60 ||||| |||||| |||||||||||||| ||||| Sbjct: 47608 gacatgtattttgaaacagagggagtatcattt 47640
>gb|AC148757.2| Medicago truncatula clone mth2-57e16, complete sequence Length = 90963 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 agcgacatttattttaaaaca 45 ||||||||||||||||||||| Sbjct: 79947 agcgacatttattttaaaaca 79927
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 97424 tattttaaaacagagggagta 97444
>gb|AC008497.7| Homo sapiens chromosome 5 clone CTC-432M15, complete sequence Length = 132119 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 tgcttatgtgatctaattctc 319 ||||||||||||||||||||| Sbjct: 42549 tgcttatgtgatctaattctc 42569
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 11535530 tattttaaaacagagggagta 11535510 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aacagagggagtaacattta 61 |||||||||||||||||||| Sbjct: 16049808 aacagagggagtaacattta 16049827 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attttaaaacagagggagta 54 |||||||||||||||||||| Sbjct: 12286700 attttaaaacagagggagta 12286681
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 attttaaaacagagggagtaa 55 ||||||||||||||||||||| Sbjct: 28432850 attttaaaacagagggagtaa 28432870
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 34260906 tattttaaaacagagggagta 34260926 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 aaaacagagggagtaacattt 60 ||||||||||||||||||||| Sbjct: 4579195 aaaacagagggagtaacattt 4579175 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 atttattttaaaacagagggagta 54 ||||||||| |||||||||||||| Sbjct: 11711587 atttattttgaaacagagggagta 11711564 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 atttattttaaaacagagggagta 54 ||||||||| |||||||||||||| Sbjct: 8716157 atttattttgaaacagagggagta 8716180
>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15, complete sequence Length = 159270 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 123689 tattttaaaacagagggagta 123709
>dbj|AP005836.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0013F08 Length = 166989 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 51537 tattttaaaacagagggagta 51517
>gb|AC007956.5|AC007956 Homo sapiens chromosome 14 clones CTD-3211F8 and RP11-173A8 containing KIAA0317 gene, complete cds; and unknown gene, complete sequence Length = 233738 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 tttaaaacagagggagtaaca 57 ||||||||||||||||||||| Sbjct: 23335 tttaaaacagagggagtaaca 23315
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 attttaaaacagagggagtaa 55 ||||||||||||||||||||| Sbjct: 145428 attttaaaacagagggagtaa 145448
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 108407 tattttaaaacagagggagta 108427
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 189204 tattttaaaacagagggagta 189224
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 attttaaaacagagggagtaa 55 ||||||||||||||||||||| Sbjct: 39883 attttaaaacagagggagtaa 39903
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 96179 tattttaaaacagagggagta 96199
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 aaaacagagggagtaacattt 60 ||||||||||||||||||||| Sbjct: 114574 aaaacagagggagtaacattt 114554
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 tattttaaaacagagggagtaacat 58 ||||||||||| ||||||||||||| Sbjct: 120307 tattttaaaacggagggagtaacat 120283
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 140056 tattttaaaacagagggagta 140036
>gb|AC169807.2| Rhesus Macaque CHR4 BAC CH250-23P16 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 172055 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 cagcctctgtgttccagtctg 402 ||||||||||||||||||||| Sbjct: 6373 cagcctctgtgttccagtctg 6353
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagta 54 ||||||||||||||||||||| Sbjct: 63525 tattttaaaacagagggagta 63545
>gb|AC147907.2| Xenopus tropicalis clone CH216-74C22, complete sequence Length = 184109 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ctgttaaagatgaaagatgg 285 |||||||||||||||||||| Sbjct: 145753 ctgttaaagatgaaagatgg 145772
>gb|AC147837.2| Xenopus tropicalis clone CH216-28I17, complete sequence Length = 181178 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ctgttaaagatgaaagatgg 285 |||||||||||||||||||| Sbjct: 48920 ctgttaaagatgaaagatgg 48901
>ref|XM_451027.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A00660g predicted mRNA Length = 1575 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 tcatgataatcttttcagat 103 |||||||||||||||||||| Sbjct: 854 tcatgataatcttttcagat 873
>gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, complete sequence Length = 208211 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 acacttatggcacccagata 131 |||||||||||||||||||| Sbjct: 150566 acacttatggcacccagata 150585
>emb|Z75529.1|CEC44H9 Caenorhabditis elegans Cosmid C44H9, complete sequence Length = 28684 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 atagttgaacttgtagccga 501 |||||||||||||||||||| Sbjct: 12606 atagttgaacttgtagccga 12587
>ref|XM_948856.1| Theileria annulata strain Ankara hypothetical protein (TA05880) partial mRNA Length = 927 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gataacagaatacacttatggcac 124 |||||||||||||||||| ||||| Sbjct: 595 gataacagaatacacttaaggcac 618
>ref|XM_675020.1| Plasmodium berghei strain ANKA hypothetical protein (PB001210.02.0) partial mRNA Length = 633 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gtacaaattttgtactaaaa 23 |||||||||||||||||||| Sbjct: 157 gtacaaattttgtactaaaa 138
>gb|AC146586.2| Medicago truncatula clone mth2-71m12, complete sequence Length = 109629 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 27 cgacatttattttaaaacagagggagta 54 ||||| |||||||||||| ||||||||| Sbjct: 83154 cgacacttattttaaaacggagggagta 83181
>gb|AC146720.23| Medicago truncatula clone mth2-17n5, complete sequence Length = 126477 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 27 cgacatttattttaaaacagagggagta 54 |||||||||||||||||| |||||||| Sbjct: 107554 cgacatttattttaaaacgaagggagta 107527
>gb|AC126780.18| Medicago truncatula clone mth2-10n4, complete sequence Length = 139213 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 28 gacatttattttaaaacagagggagtaa 55 ||||||||||||||||| |||| ||||| Sbjct: 124771 gacatttattttaaaacggaggaagtaa 124798
>gb|AC148291.22| Medicago truncatula clone mth2-14n3, complete sequence Length = 138853 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attttaaaacagagggagta 54 |||||||||||||||||||| Sbjct: 73914 attttaaaacagagggagta 73933
>gb|AC140033.3| Medicago truncatula clone mth2-24f11, complete sequence Length = 120384 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagtaacattta 61 ||||||||||| ||||||||||| |||| Sbjct: 28385 tattttaaaacggagggagtaacgttta 28412
>gb|AC139526.22| Medicago truncatula clone mth2-9b23, complete sequence Length = 141491 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 agcgacatttattttaaaacagag 48 ||||||||| |||||||||||||| Sbjct: 104512 agcgacattcattttaaaacagag 104535
>gb|AC140544.21| Medicago truncatula clone mth2-17g16, complete sequence Length = 118777 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagtaacattta 61 ||||||||||| ||||||||||| |||| Sbjct: 74303 tattttaaaacggagggagtaacgttta 74330
>emb|AL137224.17| Human DNA sequence from clone RP4-594L9 on chromosome 11p12-13 Contains the ELF5 (E74-like factor 5 (ets domain transcription factor)) gene, ESTs, STSs and GSSs, complete sequence Length = 85138 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 ttccagtctgttctccacac 412 |||||||||||||||||||| Sbjct: 77637 ttccagtctgttctccacac 77656
>emb|AL109627.18|HSJ733M16 Human DNA sequence from clone RP4-733M16 on chromosome 1p36.11-36.23 Contains four novel genes, a novel gene (FLJ33962), a novel gene (MGC10731), the 3' end of a novel gene (KIAA1332), a metallothionein family pseudogene and three CpG islands, complete sequence Length = 120825 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aaaatgcatacactattcag 153 |||||||||||||||||||| Sbjct: 36227 aaaatgcatacactattcag 36246
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attttaaaacagagggagta 54 |||||||||||||||||||| Sbjct: 66149 attttaaaacagagggagta 66168
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 tttgatactcgaagaatttc 230 |||||||||||||||||||| Sbjct: 153671 tttgatactcgaagaatttc 153690 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tcatgataatcttttcagat 103 |||||||||||||||||||| Sbjct: 65118 tcatgataatcttttcagat 65099
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 attttaaaacagagggagtaacat 58 |||||||||| ||||||||||||| Sbjct: 88776 attttaaaacggagggagtaacat 88799
>gb|AC105998.4| Homo sapiens chromosome 8, clone CTC-877B12, complete sequence Length = 76970 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 aaaaatgcatacactattca 152 |||||||||||||||||||| Sbjct: 22951 aaaaatgcatacactattca 22932
>gb|AC119073.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0082N20 BAC genomic sequence, complete sequence Length = 138826 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 34 tattttaaaacagagggagtaacattta 61 |||||| |||| |||||||||||||||| Sbjct: 51394 tattttgaaacggagggagtaacattta 51367
>gb|AC087863.10| Homo sapiens 12q BAC RP11-357K6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179876 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 aagacgaacactgttaaagatgaa 279 |||| ||||||||||||||||||| Sbjct: 100753 aagatgaacactgttaaagatgaa 100730
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attttaaaacagagggagta 54 |||||||||||||||||||| Sbjct: 160918 attttaaaacagagggagta 160899
>gb|AC021829.8| Homo sapiens chromosome 11, clone RP11-436H16, complete sequence Length = 163497 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 actgttaaagatgaaagatg 284 |||||||||||||||||||| Sbjct: 53507 actgttaaagatgaaagatg 53526
>ref|NM_073812.2| Caenorhabditis elegans C44H9.4 (C44H9.4) mRNA, complete cds Length = 3478 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 atagttgaacttgtagccga 501 |||||||||||||||||||| Sbjct: 3290 atagttgaacttgtagccga 3271
>gb|AC022083.6|AC022083 Homo sapiens chromosome 15 clone CTD-2137J4 map 15q21.3, complete sequence Length = 114149 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tttaaaacagagggagtaac 56 |||||||||||||||||||| Sbjct: 102432 tttaaaacagagggagtaac 102451
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 tttattttaaaacagagggagtaa 55 ||||||||||||| |||||||||| Sbjct: 29812475 tttattttaaaacggagggagtaa 29812498
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 atttattttaaaacagagggagta 54 |||||||||||||| ||||||||| Sbjct: 22368944 atttattttaaaacggagggagta 22368967
>gb|AC017003.4|AC017003 Homo sapiens clone RP11-78C11, complete sequence Length = 118385 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tattttaaaacagagggagt 53 |||||||||||||||||||| Sbjct: 87677 tattttaaaacagagggagt 87696
>gb|AF297071.1|AF297071 Syringa pinnatifolia specimen-voucher Spin2499 external transcribed spacer, partial sequence Length = 362 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 gtgttccagtctgttctccacact 413 ||||||||| |||||||||||||| Sbjct: 192 gtgttccagcctgttctccacact 215
>gb|AC069019.8|AC069019 Mus musculus BAC RP23-455N13 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 196175 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 311 ctaattctcttccaggagaggttt 334 ||||||||||| |||||||||||| Sbjct: 151006 ctaattctctttcaggagaggttt 150983
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attttaaaacagagggagta 54 |||||||||||||||||||| Sbjct: 37040 attttaaaacagagggagta 37021
>gb|AC108039.4| Homo sapiens BAC clone RP11-210C5 from 2, complete sequence Length = 168612 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 tccagtctgttctccacact 413 |||||||||||||||||||| Sbjct: 56992 tccagtctgttctccacact 57011
>gb|AC139713.1| Homo sapiens BAC clone RP11-481K16 from 4, complete sequence Length = 196020 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 agtctgttctccacactatg 416 |||||||||||||||||||| Sbjct: 187293 agtctgttctccacactatg 187312
>gb|AC134979.5| Homo sapiens chromosome 15, clone RP11-960P22, complete sequence Length = 41484 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cagatacaaaaatgcataca 145 |||||||||||||||||||| Sbjct: 27658 cagatacaaaaatgcataca 27639
>gb|AC134981.6| Homo sapiens chromosome 15, clone RP11-361C13, complete sequence Length = 194789 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cagatacaaaaatgcataca 145 |||||||||||||||||||| Sbjct: 164366 cagatacaaaaatgcataca 164347
>dbj|AP004137.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1297_D02 Length = 104470 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 acagagggagtaacatttag 62 |||||||||||||||||||| Sbjct: 75914 acagagggagtaacatttag 75895
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 tttattttaaaacagagggagtaa 55 |||||||||||| ||||||||||| Sbjct: 145392 tttattttaaaatagagggagtaa 145369
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 tttattttaaaacagagggagtaa 55 |||||||||||| ||||||||||| Sbjct: 4621 tttattttaaaatagagggagtaa 4598
>dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463G12 Length = 145403 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 atttattttaaaacagagggagta 54 ||||||||| |||||||||||||| Sbjct: 123204 atttattttgaaacagagggagta 123227
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1328_D07 Length = 155007 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aacagagggagtaacattta 61 |||||||||||||||||||| Sbjct: 50021 aacagagggagtaacattta 50040
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 atttattttaaaacagagggagta 54 ||||||||| |||||||||||||| Sbjct: 15236 atttattttgaaacagagggagta 15259
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 attttaaaacagagggagta 54 |||||||||||||||||||| Sbjct: 70254 attttaaaacagagggagta 70235
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0010K08 Length = 184760 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 atttattttaaaacagagggagta 54 ||||||||| |||||||||||||| Sbjct: 157876 atttattttgaaacagagggagta 157853
>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0477B05 Length = 142166 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 atttattttaaaacagagggagta 54 ||||||||| |||||||||||||| Sbjct: 19477 atttattttgaaacagagggagta 19454
>dbj|AB025613.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2I5 Length = 71807 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 atttattttaaaacagagggagta 54 ||||||||| |||||||||||||| Sbjct: 65453 atttattttgaaacagagggagta 65430
>emb|AJ130983.1|WYE130983 Wheat yellow mosaic virus partial gene for polyprotein, (NIb polymerase and coat protein), genomic RNA, country China, Pujiang Length = 2034 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 agcaaccaaggttgatgtatgcaa 558 ||||||||||||||||| |||||| Sbjct: 1326 agcaaccaaggttgatggatgcaa 1349
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 32 tttattttaaaacagagggagtaacatt 59 ||||||||| ||| |||||||||||||| Sbjct: 48601 tttattttagaacggagggagtaacatt 48574
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 atttattttaaaacagagggagta 54 |||||||||||||| ||||||||| Sbjct: 22297289 atttattttaaaacggagggagta 22297312
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 tttattttaaaacagagggagtaa 55 ||||||||||||| |||||||||| Sbjct: 93401 tttattttaaaacggagggagtaa 93424
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 atttattttaaaacagagggagta 54 |||||||||||||| ||||||||| Sbjct: 138590 atttattttaaaacggagggagta 138567
>emb|BX284626.3| Mouse DNA sequence from clone RP23-76P19 on chromosome 11, complete sequence Length = 182810 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 ctaattctcttccaggagaggttt 334 ||||||||||| |||||||||||| Sbjct: 64088 ctaattctctttcaggagaggttt 64111
>emb|CR956434.13| M.truncatula DNA sequence from clone MTH2-35N9 on chromosome 3, complete sequence Length = 113074 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 attttaaaacagagggagta 54 |||||||||||||||||||| Sbjct: 73503 attttaaaacagagggagta 73522
>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144, complete sequence Length = 135217 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 attttaaaacagagggagtaacat 58 |||||||||| ||||||||||||| Sbjct: 111520 attttaaaacggagggagtaacat 111543
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ttattttaaaacagagggag 52 |||||||||||||||||||| Sbjct: 57262 ttattttaaaacagagggag 57243
>emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chromosome 4, complete sequence Length = 151967 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ttctcttccaggagaggttt 334 |||||||||||||||||||| Sbjct: 130483 ttctcttccaggagaggttt 130464
>gb|AC025884.28| Homo sapiens chromosome 15, clone RP11-603B24, complete sequence Length = 165227 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cagatacaaaaatgcataca 145 |||||||||||||||||||| Sbjct: 47671 cagatacaaaaatgcataca 47652
>dbj|D30809.1|WHTHPB1B Wheat gene for transcription factor HBP-1b(c38), partial cds Length = 6706 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 12 tttgtactaaaacagcgacatttatttt 39 ||||||||||| |||||||| ||||||| Sbjct: 4875 tttgtactaaatcagcgacacttatttt 4902 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,397,699 Number of Sequences: 3902068 Number of extensions: 5397699 Number of successful extensions: 99767 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97765 Number of HSP's gapped (non-prelim): 2001 length of query: 572 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 549 effective length of database: 17,143,297,704 effective search space: 9411670439496 effective search space used: 9411670439496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
