ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4h04 |
|---|---|
| Clone Library Name | barley_pub |
>FUS_RINDR (P41356) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 546 Score = 31.2 bits (69), Expect = 0.72 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = -1 Query: 191 FILTRGNLAVSFASTLEACYSLGSIL 114 FIL++GNL + AS L CY+ GSI+ Sbjct: 375 FILSKGNLIANCASILCKCYTTGSII 400
>FUS_RINDK (P12574) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 546 Score = 31.2 bits (69), Expect = 0.72 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = -1 Query: 191 FILTRGNLAVSFASTLEACYSLGSIL 114 FIL++GNL + AS L CY+ GSI+ Sbjct: 375 FILSKGNLIANCASILCKCYTTGSII 400
>FUS_RINDB (P41360) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 546 Score = 31.2 bits (69), Expect = 0.72 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = -1 Query: 191 FILTRGNLAVSFASTLEACYSLGSIL 114 FIL++GNL + AS L CY+ GSI+ Sbjct: 375 FILSKGNLIANCASILCKCYTTGSII 400
>FUS_MEASZ (P69358) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 550 Score = 30.8 bits (68), Expect = 0.94 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 11/55 (20%) Frame = -1 Query: 245 PPMPASVKCLQ-----CTR------FVGLFILTRGNLAVSFASTLEACYSLGSIL 114 P P +CL+ C R F FIL++GNL + AS L CY+ G+I+ Sbjct: 350 PMSPLLQECLRGSTKSCARTLVSGSFGNRFILSQGNLIANCASILCKCYTTGTII 404
>FUS_MEASP (P69357) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 550 Score = 30.8 bits (68), Expect = 0.94 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 11/55 (20%) Frame = -1 Query: 245 PPMPASVKCLQ-----CTR------FVGLFILTRGNLAVSFASTLEACYSLGSIL 114 P P +CL+ C R F FIL++GNL + AS L CY+ G+I+ Sbjct: 350 PMSPLLQECLRGSTKSCARTLVSGSFGNRFILSQGNLIANCASILCKCYTTGTII 404
>FUS_MEASL (P69356) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 550 Score = 30.8 bits (68), Expect = 0.94 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 11/55 (20%) Frame = -1 Query: 245 PPMPASVKCLQ-----CTR------FVGLFILTRGNLAVSFASTLEACYSLGSIL 114 P P +CL+ C R F FIL++GNL + AS L CY+ G+I+ Sbjct: 350 PMSPLLQECLRGSTKSCARTLVSGSFGNRFILSQGNLIANCASILCKCYTTGTII 404
>FUS_MEASH (P69355) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 550 Score = 30.8 bits (68), Expect = 0.94 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 11/55 (20%) Frame = -1 Query: 245 PPMPASVKCLQ-----CTR------FVGLFILTRGNLAVSFASTLEACYSLGSIL 114 P P +CL+ C R F FIL++GNL + AS L CY+ G+I+ Sbjct: 350 PMSPLLQECLRGSTKSCARTLVSGSFGNRFILSQGNLIANCASILCKCYTTGTII 404
>FUS_MEASF (P69354) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 550 Score = 30.8 bits (68), Expect = 0.94 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 11/55 (20%) Frame = -1 Query: 245 PPMPASVKCLQ-----CTR------FVGLFILTRGNLAVSFASTLEACYSLGSIL 114 P P +CL+ C R F FIL++GNL + AS L CY+ G+I+ Sbjct: 350 PMSPLLQECLRGSTKSCARTLVSGSFGNRFILSQGNLIANCASILCKCYTTGTII 404
>FUS_MEASE (P69353) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 550 Score = 30.8 bits (68), Expect = 0.94 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 11/55 (20%) Frame = -1 Query: 245 PPMPASVKCLQ-----CTR------FVGLFILTRGNLAVSFASTLEACYSLGSIL 114 P P +CL+ C R F FIL++GNL + AS L CY+ G+I+ Sbjct: 350 PMSPLLQECLRGSTKSCARTLVSGSFGNRFILSQGNLIANCASILCKCYTTGTII 404
>FUS_MEASA (P35973) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 550 Score = 30.8 bits (68), Expect = 0.94 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 11/55 (20%) Frame = -1 Query: 245 PPMPASVKCLQ-----CTR------FVGLFILTRGNLAVSFASTLEACYSLGSIL 114 P P +CL+ C R F FIL++GNL + AS L CY+ G+I+ Sbjct: 350 PMSPLLQECLRGSTKSCARTLVSGSFGNRFILSQGNLIANCASILCKCYTTGTII 404
>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor| (LRP) (Alpha-2-macroglobulin receptor) (A2MR) Length = 4543 Score = 30.8 bits (68), Expect = 0.94 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = -3 Query: 276 CSELCLQVSSASDACKCQVPPMYTLRWLVYPYSWKFGCQFCIHFRSVLLTRIH 118 CS+LCL S S +C C YS K G Q C S LL +H Sbjct: 1853 CSQLCLPTSETSRSCMCTA-----------GYSLKSGQQSCEGVGSFLLYSVH 1894
>FUS_MEASY (P26032) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 534 Score = 30.8 bits (68), Expect = 0.94 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 11/55 (20%) Frame = -1 Query: 245 PPMPASVKCLQ-----CTR------FVGLFILTRGNLAVSFASTLEACYSLGSIL 114 P P +CL+ C R F FIL++GNL + AS L CY+ G+I+ Sbjct: 350 PMSPLLQECLRGSTKSCARTLVSGSFGNRFILSQGNLIANCASILCKCYTTGTII 404
>FUS_MEASI (P26031) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 529 Score = 30.8 bits (68), Expect = 0.94 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 11/55 (20%) Frame = -1 Query: 245 PPMPASVKCLQ-----CTR------FVGLFILTRGNLAVSFASTLEACYSLGSIL 114 P P +CL+ C R F FIL++GNL + AS L CY+ G+I+ Sbjct: 353 PMSPLLQECLRGSTKSCARTLVSGSFGNRFILSQGNLIANCASILCKCYTTGTII 407
>FUS_RINDL (P10864) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 546 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = -1 Query: 191 FILTRGNLAVSFASTLEACYSLGSIL 114 FIL++GNL + AS L CY+ GSI+ Sbjct: 375 FILSKGNLIGNCASILCKCYTTGSII 400
>CAC1C_RAT (P22002) Voltage-dependent L-type calcium channel alpha-1C subunit| (Voltage-gated calcium channel alpha subunit Cav1.2) (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (RAT brain class C) (RBC) Length = 2169 Score = 28.9 bits (63), Expect = 3.6 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = -1 Query: 236 PASVKCLQCTRFVGLFILTR--GNLAVSFASTLEACYSLGSILL 111 P + C +C R + +F +TR +L+ AS L + S+ S+LL Sbjct: 643 PLGISCWRCVRLLRIFKITRYWNSLSNLVASLLNSLRSIASLLL 686
>PA2B_AGKAC (Q1ZY03) Phospholipase A2, basic precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) Length = 138 Score = 28.5 bits (62), Expect = 4.6 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -3 Query: 201 RWLVYPYSWKFGCQFC 154 +W +YPYSWK G C Sbjct: 76 KWDIYPYSWKTGVIIC 91
>FUS_CDVO (P12569) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 662 Score = 28.5 bits (62), Expect = 4.6 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1 Query: 191 FILTRGNLAVSFASTLEACYSLGSIL 114 FIL++GN+ + AS L CYS +I+ Sbjct: 491 FILSKGNIVANCASILCKCYSTSTII 516
>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor| (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91 antigen) Length = 4544 Score = 28.5 bits (62), Expect = 4.6 Identities = 17/53 (32%), Positives = 22/53 (41%) Frame = -3 Query: 276 CSELCLQVSSASDACKCQVPPMYTLRWLVYPYSWKFGCQFCIHFRSVLLTRIH 118 CS+LCL S + +C C YS + G Q C S LL +H Sbjct: 1857 CSQLCLPTSETTRSCMCTA-----------GYSLRSGQQACEGVGSFLLYSVH 1898
>CH602_CHLCV (P59698) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)| Length = 536 Score = 27.7 bits (60), Expect = 7.9 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = -1 Query: 218 LQCTRFVGLFILTRGNLAVSFASTLEACYSLGSILLCRSNECSIILLSCVS 66 LQ TR VGL + V+ T+E Y SILLC LSC++ Sbjct: 186 LQATRHVGLNSGYLSSYFVTHPETMEVIYEDASILLCNQ------ALSCLN 230 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,457,122 Number of Sequences: 219361 Number of extensions: 616239 Number of successful extensions: 1631 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1597 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1630 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
