>emb|AL133269.17| Human DNA sequence from clone RP3-468K3 on chromosome 6q25-26 Contains
             a beta tubulin pseudogene, complete sequence
          Length = 90687

 Score = 44.1 bits (22), Expect = 0.024
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 24    ttgcagagtatattttgcaaga 45
             ||||||||||||||||||||||
Sbjct: 23915 ttgcagagtatattttgcaaga 23894

>emb|AL928855.7| Mouse DNA sequence from clone RP23-452C10 on chromosome 2, complete
              sequence
          Length = 196567

 Score = 38.2 bits (19), Expect = 1.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     ggcatattcactttgcaga 30
              |||||||||||||||||||
Sbjct: 185860 ggcatattcactttgcaga 185842

>gb|AC146164.3| Pan troglodytes BAC clone RP43-24F8 from 7, complete sequence
          Length = 180141

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 19     tcactttgcagagtatat 36
              ||||||||||||||||||
Sbjct: 165084 tcactttgcagagtatat 165101

>gb|AC117689.11| Mus musculus chromosome 12, clone RP23-446I19, complete sequence
          Length = 200562

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 27     cagagtatattttgcaag 44
              ||||||||||||||||||
Sbjct: 199418 cagagtatattttgcaag 199435

>emb|CT025542.5| Mouse DNA sequence from clone RP24-270A18 on chromosome 12, complete
             sequence
          Length = 181654

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 27    cagagtatattttgcaag 44
             ||||||||||||||||||
Sbjct: 65924 cagagtatattttgcaag 65941

>gb|AC092685.2| Homo sapiens BAC clone RP11-746P2 from 7, complete sequence
          Length = 183263

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 17     attcactttgcagagtatattt 38
              ||||||||||||||||| ||||
Sbjct: 146776 attcactttgcagagtaaattt 146797

>gb|AC130798.15| Medicago truncatula clone mth2-27f17, complete sequence
          Length = 92189

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 18    ttcactttgcagagtatatttt 39
             ||||||||||| ||||||||||
Sbjct: 74234 ttcactttgcaaagtatatttt 74255

>emb|AL161892.9| Human DNA sequence from clone RP11-173N7 on chromosome 13 Contains a
             pseudogene similar to part of a novel gene (MGC5466), a
             breast carcinoma amplified sequence 2 (DAM1, BCAS2)
             pseudogene and a CpG island, complete sequence
          Length = 146216

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 29    gagtatattttgcaagag 46
             ||||||||||||||||||
Sbjct: 84994 gagtatattttgcaagag 84977

>emb|BX842648.2| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 3/11
          Length = 346416

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 8      tgaaggcatattcacttt 25
              ||||||||||||||||||
Sbjct: 208479 tgaaggcatattcacttt 208462

>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12,
              complete sequence
          Length = 128574

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 5      gtttgaaggcatattcac 22
              ||||||||||||||||||
Sbjct: 101674 gtttgaaggcatattcac 101691

>gb|AC093928.2| Homo sapiens chromosome 3 clone RP11-241K3, complete sequence
          Length = 165203

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 15    atattcactttgcagagt 32
             ||||||||||||||||||
Sbjct: 23953 atattcactttgcagagt 23970

>gb|AC182641.3| Pan troglodytes BAC clone CH251-294H6 from chromosome 7, complete
             sequence
          Length = 145564

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 17    attcactttgcagagtatattt 38
             ||||||||||||||||| ||||
Sbjct: 41634 attcactttgcagagtaaattt 41613

>gb|AC069444.17| Homo sapiens 3 BAC RP11-169N13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 165093

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 22    ctttgcagagtatattttgcaa 43
             ||||||||| ||||||||||||
Sbjct: 11802 ctttgcagaatatattttgcaa 11823

>gb|AC132949.4| Mus musculus BAC clone RP24-547H18 from chromosome 7, complete sequence
          Length = 206116

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     tgaaggcatattcacttt 25
             ||||||||||||||||||
Sbjct: 70777 tgaaggcatattcacttt 70760

>emb|AL929509.15| Zebrafish DNA sequence from clone CH211-165I22 in linkage group 1,
              complete sequence
          Length = 139628

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 21     actttgcagagtatattt 38
              ||||||||||||||||||
Sbjct: 108644 actttgcagagtatattt 108661

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 5       gtttgaaggcatattcac 22
               ||||||||||||||||||
Sbjct: 9769468 gtttgaaggcatattcac 9769485

>emb|BX890594.1|OSJN00301 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062N22,
             complete sequence
          Length = 181586

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 5     gtttgaaggcatattcac 22
             ||||||||||||||||||
Sbjct: 10984 gtttgaaggcatattcac 11001

>emb|AL929386.11| Zebrafish DNA sequence from clone CH211-69J13, complete sequence
          Length = 165105

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 20     cactttgcagagtatatt 37
              ||||||||||||||||||
Sbjct: 104039 cactttgcagagtatatt 104056

>gb|AC109616.9| Mus musculus chromosome 19, clone RP23-449C1, complete sequence
          Length = 167801

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 25    tgcagagtatattttgca 42
             ||||||||||||||||||
Sbjct: 22679 tgcagagtatattttgca 22662

>gb|AC102553.8| Mus musculus chromosome 19, clone RP23-159D6, complete sequence
          Length = 181534

 Score = 36.2 bits (18), Expect = 6.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 25    tgcagagtatattttgca 42
             ||||||||||||||||||
Sbjct: 47916 tgcagagtatattttgca 47933


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 413,231
Number of Sequences: 3902068
Number of extensions: 413231
Number of successful extensions: 110521
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110454
Number of HSP's gapped (non-prelim): 67
length of query: 47
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 27
effective length of database: 17,155,003,908
effective search space: 463185105516
effective search space used: 463185105516
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)