ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4h01 |
|---|---|
| Clone Library Name | barley_pub |
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 229 QAIVTGKGPLENLADHLADP 248
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 229 QAIVTGKGPLENLADHLADP 248
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 230 QAIVTGKGPLENLADHLADP 249
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 230 QAIVTGKGPLENLADHLADP 249
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 230 QAIVTGKGPLENLADHLADP 249
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 230 QAIVTGKGPLENLADHLADP 249
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 231 QAIVTGKGPLENLADHLADP 250
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 230 QAIVTGKGPLENLADHLADP 249
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 231 QAIVTGKGPLENLADHLADP 250
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 231 QAIVTGKGPLENLADHLADP 250
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 231 QAIVTGKGPLENLADHLADP 250
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 230 QAIVTGKGPLENLADHLADP 249
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 171 QAIVTGKGPLENLADHLADP 190
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 232 QAIVTGKGPLENLADHLADP 251
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 232 QAIVTGKGPLENLADHLADP 251
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 232 QAIVTGKGPLENLADHLADP 251
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 232 QAIVTGKGPLENLADHLADP 251
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 232 QAIVTGKGPLENLADHLADP 251
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 232 QAIVTGKGPLENLADHLADP 251
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 232 QAIVTGKGPLENLADHLADP 251
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 89 QAIVTGKGPLENLADHLADP 108
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 220 QAIVTGKGPLENLADHLADP 239
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 81 QAIVTGKGPLENLADHLADP 100
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 221 QAIVTGKGPLENLADHLADP 240
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 234 QAIVTGKGPLENLADHLADP 253
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLADP Sbjct: 226 QAIVTGKGPLENLADHLADP 245
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 42.0 bits (97), Expect = 5e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADH+ADP Sbjct: 230 QAIVTGKGPLENLADHIADP 249
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 42.0 bits (97), Expect = 5e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QA+V GKGPLENLADHLADP Sbjct: 231 QALVTGKGPLENLADHLADP 250
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 42.0 bits (97), Expect = 5e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADH+ADP Sbjct: 232 QAIVTGKGPLENLADHIADP 251
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 42.0 bits (97), Expect = 5e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADH+ADP Sbjct: 232 QAIVTGKGPLENLADHIADP 251
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 42.0 bits (97), Expect = 5e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENLADHLADP Sbjct: 232 QAIVTGKGPIENLADHLADP 251
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 42.0 bits (97), Expect = 5e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENLADHLADP Sbjct: 232 QAIVTGKGPIENLADHLADP 251
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 42.0 bits (97), Expect = 5e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADH+ADP Sbjct: 227 QAIVTGKGPLENLADHIADP 246
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 42.0 bits (97), Expect = 5e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENLADHLADP Sbjct: 243 QAIVTGKGPIENLADHLADP 262
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 42.0 bits (97), Expect = 5e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENLADHLADP Sbjct: 243 QAIVTGKGPIENLADHLADP 262
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 42.0 bits (97), Expect = 5e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENLADHLADP Sbjct: 239 QAIVTGKGPIENLADHLADP 258
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 41.6 bits (96), Expect = 7e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHL+DP Sbjct: 233 QAIVTGKGPLENLADHLSDP 252
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 41.2 bits (95), Expect = 8e-04 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENLADH+ADP Sbjct: 229 QAIVTGKGPIENLADHIADP 248
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 41.2 bits (95), Expect = 8e-04 Identities = 18/20 (90%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHL DP Sbjct: 232 QAIVTGKGPLENLADHLVDP 251
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 41.2 bits (95), Expect = 8e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLA+P Sbjct: 210 QAIVTGKGPLENLADHLAEP 229
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 40.8 bits (94), Expect = 0.001 Identities = 18/19 (94%), Positives = 18/19 (94%) Frame = -2 Query: 58 AIVXGKGPLENLADHLADP 2 AIV GKGPLENLADHLADP Sbjct: 194 AIVTGKGPLENLADHLADP 212
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 40.8 bits (94), Expect = 0.001 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP++NLADHLADP Sbjct: 221 QAIVTGKGPIQNLADHLADP 240
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 40.8 bits (94), Expect = 0.001 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENL+DHLADP Sbjct: 230 QAIVTGKGPIENLSDHLADP 249
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 40.4 bits (93), Expect = 0.001 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENLADHL DP Sbjct: 229 QAIVTGKGPIENLADHLTDP 248
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/20 (90%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENL DHLADP Sbjct: 233 QAIVTGKGPLENLNDHLADP 252
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLE+LADH+ADP Sbjct: 231 QAIVTGKGPLEDLADHIADP 250
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/20 (90%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENLADHLA P Sbjct: 228 QAIVTGKGPLENLADHLAGP 247
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPL+NL DHLADP Sbjct: 232 QAIVTGKGPLDNLVDHLADP 251
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 40.0 bits (92), Expect = 0.002 Identities = 16/20 (80%), Positives = 19/20 (95%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENL+DH+ADP Sbjct: 202 QAIVTGKGPIENLSDHIADP 221
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENL DHLADP Sbjct: 115 QAIVTGKGPIENLYDHLADP 134
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENL DHLADP Sbjct: 230 QAIVTGKGPIENLFDHLADP 249
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENL DHLADP Sbjct: 231 QAIVTGKGPIENLYDHLADP 250
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 38.9 bits (89), Expect = 0.004 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP++NL DHLADP Sbjct: 218 QAIVTGKGPVQNLTDHLADP 237
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 38.5 bits (88), Expect = 0.006 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENL DH+ADP Sbjct: 230 QAIVTGKGPIENLYDHVADP 249
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 38.5 bits (88), Expect = 0.006 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENL DH+ADP Sbjct: 230 QAIVTGKGPIENLFDHVADP 249
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 38.5 bits (88), Expect = 0.006 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENL DHLA+P Sbjct: 239 QAIVTGKGPIENLTDHLANP 258
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 38.5 bits (88), Expect = 0.006 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENL DH+ADP Sbjct: 228 QAIVTGKGPIENLFDHVADP 247
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 38.1 bits (87), Expect = 0.007 Identities = 17/20 (85%), Positives = 17/20 (85%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENL DHL DP Sbjct: 233 QAIVTGKGPLENLFDHLDDP 252
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 37.7 bits (86), Expect = 0.009 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP+ENL+DH+ DP Sbjct: 230 QAIVTGKGPIENLSDHINDP 249
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 37.4 bits (85), Expect = 0.012 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP++NL DH+ADP Sbjct: 230 QAIVTGKGPIQNLYDHVADP 249
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 36.6 bits (83), Expect = 0.021 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGPLENL DHL +P Sbjct: 230 QAIVTGKGPLENLLDHLDNP 249
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 36.2 bits (82), Expect = 0.027 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV GKGP++NL DHLA+P Sbjct: 218 QAIVTGKGPVQNLDDHLANP 237
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 34.3 bits (77), Expect = 0.10 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QA V G+GP+ENLA HL+DP Sbjct: 242 QAYVTGEGPVENLAKHLSDP 261
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 34.3 bits (77), Expect = 0.10 Identities = 14/20 (70%), Positives = 16/20 (80%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QA+V G GP +NL DHLADP Sbjct: 242 QALVTGVGPYQNLLDHLADP 261
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 32.3 bits (72), Expect = 0.39 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 Q+ G GPLENLA HLADP Sbjct: 210 QSAYLGTGPLENLATHLADP 229
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 31.2 bits (69), Expect = 0.88 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QA GKGPL N A HL+DP Sbjct: 259 QAAATGKGPLNNWATHLSDP 278
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 31.2 bits (69), Expect = 0.88 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QA GKGPL N A HL+DP Sbjct: 256 QAAATGKGPLNNWATHLSDP 275
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -2 Query: 52 VXGKGPLENLADHLADP 2 V GKGP ENL HL+DP Sbjct: 225 VTGKGPFENLLQHLSDP 241
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 30.4 bits (67), Expect = 1.5 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 QAIV G+GP+EN HL DP Sbjct: 87 QAIVTGEGPVENWLYHLQDP 106
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 28.9 bits (63), Expect = 4.4 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 Q I G GP++NL HLADP Sbjct: 239 QHIYTGTGPIDNLFAHLADP 258
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 28.9 bits (63), Expect = 4.4 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 Query: 61 QAIVXGKGPLENLADHLADP 2 Q I G GP++NL HLADP Sbjct: 239 QHIYTGTGPIDNLFAHLADP 258 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,361,557 Number of Sequences: 219361 Number of extensions: 27662 Number of successful extensions: 178 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 177 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 178 length of database: 80,573,946 effective HSP length: 0 effective length of database: 80,573,946 effective search space used: 1933774704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
