ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaak4h24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genom... 141 3e-30
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 141 3e-30
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
4gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genom... 62 2e-06
5gb|AC133456.11| Mus musculus chromosome 5, clone RP24-465G18, co... 44 0.48
6ref|NM_009491.1| Mus musculus vomeronasal 2, receptor, 16 (V2r16... 44 0.48
7gb|AF011426.1|AF011426 Mus musculus putative pheromone receptor ... 44 0.48
8gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 1.9
9gb|AC105898.2| Drosophila melanogaster clone BACR25P15, complete... 42 1.9
10gb|AE017336.2| Bacillus anthracis str. 'Ames Ancestor' plasmid p... 42 1.9
11gb|AE014313.1| Homo sapiens chromosome 13q34 schizophrenia regio... 42 1.9
12gb|AF065404.1| Bacillus anthracis virulence plasmid PX01, comple... 42 1.9
13emb|AL606503.10| Human DNA sequence from clone RP11-63B15 on chr... 42 1.9
14emb|AL512288.19| Human DNA sequence from clone RP11-460I13 on ch... 42 1.9
15emb|AL359751.12| Human DNA sequence from clone RP11-166E2 on chr... 42 1.9
16dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 42 1.9
17gb|AY122134.1| Drosophila melanogaster GH27779 full insert cDNA 42 1.9
18gb|AE011190.1| Bacillus anthracis str. A2012 plasmid pXO1, compl... 42 1.9
19ref|NM_164444.1| Drosophila melanogaster CG31663-RA (CG31663), mRNA 42 1.9
20gb|AC105899.1| Drosophila melanogaster, chromosome 2L, region 22... 42 1.9
21gb|AC008320.4|AC008320 Drosophila melanogaster, chromosome 2L, r... 42 1.9
22gb|AC108039.4| Homo sapiens BAC clone RP11-210C5 from 2, complet... 42 1.9
23gb|AE003585.5| Drosophila melanogaster chromosome 2L, section 6 ... 42 1.9
24gb|AC004574.1|AC004574 Drosophila melanogaster, chromosome 2L, r... 42 1.9
25ref|XM_611873.2| PREDICTED: Bos taurus similar to putative acyl-... 40 7.5
26emb|CR318600.13| Zebrafish DNA sequence from clone DKEY-37F13 in... 40 7.5
27ref|XM_759347.1| Theileria parva strain Muguga chromosome 4 hypo... 40 7.5
28gb|AC091900.3| Homo sapiens chromosome 5 clone RP11-158K14, comp... 40 7.5
29gb|AC093505.2| Homo sapiens chromosome 5 clone CTD-2010M15, comp... 40 7.5
30gb|AC010387.5| Homo sapiens chromosome 5 clone CTD-2074D8, compl... 40 7.5
31emb|BX255943.6| Zebrafish DNA sequence from clone CH211-246M13 i... 40 7.5
32dbj|AK036779.1| Mus musculus adult female vagina cDNA, RIKEN ful... 40 7.5
33gb|AC008604.5|AC008604 Homo sapiens chromosome 5 clone CTB-109F8... 40 7.5
34gb|BC093596.1| Rattus norvegicus proteolipid protein, mRNA (cDNA... 40 7.5
35ref|NM_030990.1| Rattus norvegicus proteolipid protein (Plp), mRNA 40 7.5
36gb|AC158686.2| Mus musculus 10 BAC RP24-74G10 (Roswell Park Canc... 40 7.5
37emb|BX664736.8| Mouse DNA sequence from clone RP23-156G14 on chr... 40 7.5
38gb|M11185.1|RATPLPX Rat brain myelin proteolipid protein (PLP) m... 40 7.5
39gb|M25888.1|RATPLPA Rat lipophilin mRNA, 3' end 40 7.5 
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete
              sequence
          Length = 132981

 Score =  141 bits (71), Expect = 3e-30
 Identities = 113/127 (88%)
 Strand = Plus / Minus

                                                                          
Query: 312    tcttggtgtagaatatccatcctataacatatgacagcgtcctccatcctctatatggct 371
              ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| | ||
Sbjct: 118153 tcttggtgtagaatatccatcctataacataagacaatgtcctccatcctctatacgcct 118094

                                                                          
Query: 372    tgggctttgatatcgtcgcgatgaagcccttcagcgcagcaccaagatcttgtgagtcaa 431
              ||||||| |||||||| || |||||||| ||||  ||||| ||||| ||||||| |||||
Sbjct: 118093 tgggcttagatatcgttgcaatgaagcctttcaatgcagctccaaggtcttgtgtgtcaa 118034

                     
Query: 432    aggatac 438
              |||||||
Sbjct: 118033 aggatac 118027



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                          
Query: 473    tcttcattgaatgaggcatgactggtgctctcctcgaaaaccaatgaatttgagaacctg 532
              |||||| |||||||||  ||||||||||  |||||  ||||||| |||||||||||| ||
Sbjct: 118001 tcttcactgaatgaggggtgactggtgcaatcctcataaaccaaagaatttgagaacttg 117942

                
Query: 533    tc 534
              ||
Sbjct: 117941 tc 117940



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     tcatctgattatttacaggc 113
              ||||||||||||||||||||
Sbjct: 118394 tcatctgattatttacaggc 118375
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  141 bits (71), Expect = 3e-30
 Identities = 113/127 (88%)
 Strand = Plus / Minus

                                                                            
Query: 312      tcttggtgtagaatatccatcctataacatatgacagcgtcctccatcctctatatggct 371
                ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| | ||
Sbjct: 18213168 tcttggtgtagaatatccatcctataacataagacaatgtcctccatcctctatacgcct 18213109

                                                                            
Query: 372      tgggctttgatatcgtcgcgatgaagcccttcagcgcagcaccaagatcttgtgagtcaa 431
                ||||||| |||||||| || |||||||| ||||  ||||| ||||| ||||||| |||||
Sbjct: 18213108 tgggcttagatatcgttgcaatgaagcctttcaatgcagctccaaggtcttgtgtgtcaa 18213049

                       
Query: 432      aggatac 438
                |||||||
Sbjct: 18213048 aggatac 18213042



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                            
Query: 274      tcatttcccgggtttcttcctcttctgagcggccatcctcttggtgtagaatatccatcc 333
                ||||||||| |||||| | || ||| ||||  | ||||| ||||||||||||||||| ||
Sbjct: 34299293 tcatttcccaggtttcgttcttttcagagcaacaatcctattggtgtagaatatccaccc 34299352

                                               
Query: 334      tataacatatgacagcgtcctccatcctcta 364
                || |||||| ||||  ||||||||| |||||
Sbjct: 34299353 tagaacataagacaatgtcctccattctcta 34299383



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                            
Query: 473      tcttcattgaatgaggcatgactggtgctctcctcgaaaaccaatgaatttgagaacctg 532
                |||||| |||||||||  ||||||||||  |||||  ||||||| |||||||||||| ||
Sbjct: 18213016 tcttcactgaatgaggggtgactggtgcaatcctcataaaccaaagaatttgagaacttg 18212957

                  
Query: 533      tc 534
                ||
Sbjct: 18212956 tc 18212955



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 94       tcatctgattatttacaggc 113
                ||||||||||||||||||||
Sbjct: 18213409 tcatctgattatttacaggc 18213390
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  141 bits (71), Expect = 3e-30
 Identities = 113/127 (88%)
 Strand = Plus / Minus

                                                                            
Query: 312      tcttggtgtagaatatccatcctataacatatgacagcgtcctccatcctctatatggct 371
                ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| | ||
Sbjct: 18206709 tcttggtgtagaatatccatcctataacataagacaatgtcctccatcctctatacgcct 18206650

                                                                            
Query: 372      tgggctttgatatcgtcgcgatgaagcccttcagcgcagcaccaagatcttgtgagtcaa 431
                ||||||| |||||||| || |||||||| ||||  ||||| ||||| ||||||| |||||
Sbjct: 18206649 tgggcttagatatcgttgcaatgaagcctttcaatgcagctccaaggtcttgtgtgtcaa 18206590

                       
Query: 432      aggatac 438
                |||||||
Sbjct: 18206589 aggatac 18206583



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                            
Query: 274      tcatttcccgggtttcttcctcttctgagcggccatcctcttggtgtagaatatccatcc 333
                ||||||||| |||||| | || ||| ||||  | ||||| ||||||||||||||||| ||
Sbjct: 34389765 tcatttcccaggtttcgttcttttcagagcaacaatcctattggtgtagaatatccaccc 34389824

                                               
Query: 334      tataacatatgacagcgtcctccatcctcta 364
                || |||||| ||||  ||||||||| |||||
Sbjct: 34389825 tagaacataagacaatgtcctccattctcta 34389855



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                            
Query: 473      tcttcattgaatgaggcatgactggtgctctcctcgaaaaccaatgaatttgagaacctg 532
                |||||| |||||||||  ||||||||||  |||||  ||||||| |||||||||||| ||
Sbjct: 18206557 tcttcactgaatgaggggtgactggtgcaatcctcataaaccaaagaatttgagaacttg 18206498

                  
Query: 533      tc 534
                ||
Sbjct: 18206497 tc 18206496



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 94       tcatctgattatttacaggc 113
                ||||||||||||||||||||
Sbjct: 18206950 tcatctgattatttacaggc 18206931
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>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete
             sequence
          Length = 143205

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                         
Query: 274   tcatttcccgggtttcttcctcttctgagcggccatcctcttggtgtagaatatccatcc 333
             ||||||||| |||||| | || ||| ||||  | ||||| ||||||||||||||||| ||
Sbjct: 35705 tcatttcccaggtttcgttcttttcagagcaacaatcctattggtgtagaatatccaccc 35646

                                            
Query: 334   tataacatatgacagcgtcctccatcctcta 364
             || |||||| ||||  ||||||||| |||||
Sbjct: 35645 tagaacataagacaatgtcctccattctcta 35615
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>gb|AC133456.11| Mus musculus chromosome 5, clone RP24-465G18, complete sequence
          Length = 162210

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 415   aagatcttgtgagtcaaaggat 436
             ||||||||||||||||||||||
Sbjct: 31760 aagatcttgtgagtcaaaggat 31781
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>ref|NM_009491.1| Mus musculus vomeronasal 2, receptor, 16 (V2r16), mRNA
          Length = 3896

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 415  aagatcttgtgagtcaaaggat 436
            ||||||||||||||||||||||
Sbjct: 3415 aagatcttgtgagtcaaaggat 3394
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>gb|AF011426.1|AF011426 Mus musculus putative pheromone receptor (VR16) mRNA, complete cds
          Length = 3896

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 415  aagatcttgtgagtcaaaggat 436
            ||||||||||||||||||||||
Sbjct: 3415 aagatcttgtgagtcaaaggat 3394
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 275     catttcccgggtttcttcctc 295
               |||||||||||||||||||||
Sbjct: 3216209 catttcccgggtttcttcctc 3216229
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>gb|AC105898.2| Drosophila melanogaster clone BACR25P15, complete sequence
          Length = 169913

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 251    caaccgcaggcaaatggaaat 271
              |||||||||||||||||||||
Sbjct: 134448 caaccgcaggcaaatggaaat 134428
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>gb|AE017336.2| Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence
          Length = 181677

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 259    ggcaaatggaaatcatcattt 279
              |||||||||||||||||||||
Sbjct: 141394 ggcaaatggaaatcatcattt 141374
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>gb|AE014313.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section
            10 of 11 of the complete sequence
          Length = 250029

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 125  tgataaaacgggagaacacca 145
            |||||||||||||||||||||
Sbjct: 5398 tgataaaacgggagaacacca 5378
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>gb|AF065404.1| Bacillus anthracis virulence plasmid PX01, complete sequence
          Length = 181654

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 259    ggcaaatggaaatcatcattt 279
              |||||||||||||||||||||
Sbjct: 137840 ggcaaatggaaatcatcattt 137860
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>emb|AL606503.10| Human DNA sequence from clone RP11-63B15 on chromosome 1, complete
            sequence
          Length = 143104

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 26   agcttaatctgattatttacaggtg 50
            |||||||||||| ||||||||||||
Sbjct: 5743 agcttaatctgaatatttacaggtg 5719
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>emb|AL512288.19| Human DNA sequence from clone RP11-460I13 on chromosome 1 Contains
            the gene for acid sphingomyelinase-like phosphodiesterase
            (ASML3B), the gene for a novel protein (FLJ10307), two
            novel genes, the 3' end of the EYA3 gene for eyes absent
            homolog 3 (Drosophila) and an interferon-induced
            transmembrane protein pseudogene, complete sequence
          Length = 113117

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 166  aaaaatgttctaacagataac 186
            |||||||||||||||||||||
Sbjct: 9044 aaaaatgttctaacagataac 9024
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>emb|AL359751.12| Human DNA sequence from clone RP11-166E2 on chromosome 13 Contains the
             gene for LG30 and the DAOA gene for D-amino acid oxidase
             activator (LG72), complete sequence
          Length = 117068

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 125   tgataaaacgggagaacacca 145
             |||||||||||||||||||||
Sbjct: 72496 tgataaaacgggagaacacca 72476
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>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 142     accagcaagatcagagcgcaa 162
               |||||||||||||||||||||
Sbjct: 1259150 accagcaagatcagagcgcaa 1259130
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>gb|AY122134.1| Drosophila melanogaster GH27779 full insert cDNA
          Length = 3668

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 251  caaccgcaggcaaatggaaat 271
            |||||||||||||||||||||
Sbjct: 3360 caaccgcaggcaaatggaaat 3380
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>gb|AE011190.1| Bacillus anthracis str. A2012 plasmid pXO1, complete sequence
          Length = 181677

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 259    ggcaaatggaaatcatcattt 279
              |||||||||||||||||||||
Sbjct: 141394 ggcaaatggaaatcatcattt 141374
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>ref|NM_164444.1| Drosophila melanogaster CG31663-RA (CG31663), mRNA
          Length = 3650

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 251  caaccgcaggcaaatggaaat 271
            |||||||||||||||||||||
Sbjct: 3360 caaccgcaggcaaatggaaat 3380
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>gb|AC105899.1| Drosophila melanogaster, chromosome 2L, region 22C-22C, BAC clone
              BACR11F10, complete sequence
          Length = 175115

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 251    caaccgcaggcaaatggaaat 271
              |||||||||||||||||||||
Sbjct: 123710 caaccgcaggcaaatggaaat 123730
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>gb|AC008320.4|AC008320 Drosophila melanogaster, chromosome 2L, region 22A-22B, BAC clone
             BACR18A24, complete sequence
          Length = 160551

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 251   caaccgcaggcaaatggaaat 271
             |||||||||||||||||||||
Sbjct: 51419 caaccgcaggcaaatggaaat 51399
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>gb|AC108039.4| Homo sapiens BAC clone RP11-210C5 from 2, complete sequence
          Length = 168612

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 283   gggtttcttcctcttctgagc 303
             |||||||||||||||||||||
Sbjct: 57843 gggtttcttcctcttctgagc 57863
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>gb|AE003585.5| Drosophila melanogaster chromosome 2L, section 6 of 83 of the complete
              sequence
          Length = 343161

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 251    caaccgcaggcaaatggaaat 271
              |||||||||||||||||||||
Sbjct: 317531 caaccgcaggcaaatggaaat 317511
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>gb|AC004574.1|AC004574 Drosophila melanogaster, chromosome 2L, region 22B1-22B2, P1 clone
             DS05717, complete sequence
          Length = 82912

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 251   caaccgcaggcaaatggaaat 271
             |||||||||||||||||||||
Sbjct: 61025 caaccgcaggcaaatggaaat 61005
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>ref|XM_611873.2| PREDICTED: Bos taurus similar to putative acyl-CoA dehydrogenase
            (LOC532717), mRNA
          Length = 1243

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 477  cattgaatgaggcatgactg 496
            ||||||||||||||||||||
Sbjct: 1224 cattgaatgaggcatgactg 1243
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>emb|CR318600.13| Zebrafish DNA sequence from clone DKEY-37F13 in linkage group 7, complete
              sequence
          Length = 257374

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    tcacattttttaactaatca 252
              ||||||||||||||||||||
Sbjct: 207806 tcacattttttaactaatca 207825
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>ref|XM_759347.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
           (TP04_0803) partial mRNA
          Length = 1451

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 313 cttggtgtagaatatccatc 332
           ||||||||||||||||||||
Sbjct: 701 cttggtgtagaatatccatc 682
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>gb|AC091900.3| Homo sapiens chromosome 5 clone RP11-158K14, complete sequence
          Length = 180679

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   gataaccaaccactcatttg 200
             ||||||||||||||||||||
Sbjct: 17226 gataaccaaccactcatttg 17245
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>gb|AC093505.2| Homo sapiens chromosome 5 clone CTD-2010M15, complete sequence
          Length = 131489

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    gataaccaaccactcatttg 200
              ||||||||||||||||||||
Sbjct: 128101 gataaccaaccactcatttg 128120
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>gb|AC010387.5| Homo sapiens chromosome 5 clone CTD-2074D8, complete sequence
          Length = 173414

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 213    ttttcctgcacttctatatctcac 236
              ||||||||||||||||| ||||||
Sbjct: 104139 ttttcctgcacttctatctctcac 104116
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>emb|BX255943.6| Zebrafish DNA sequence from clone CH211-246M13 in linkage group 2,
             complete sequence
          Length = 155032

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    cttaatctgattatttacag 47
             ||||||||||||||||||||
Sbjct: 73270 cttaatctgattatttacag 73251
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>dbj|AK036779.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
            library, clone:9930007M10 product:unclassifiable, full
            insert sequence
          Length = 3915

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  tcacattttttaactaatca 252
            ||||||||||||||||||||
Sbjct: 2791 tcacattttttaactaatca 2772
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>gb|AC008604.5|AC008604 Homo sapiens chromosome 5 clone CTB-109F8, complete sequence
          Length = 108976

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   gataaccaaccactcatttg 200
             ||||||||||||||||||||
Sbjct: 21887 gataaccaaccactcatttg 21868
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>gb|BC093596.1| Rattus norvegicus proteolipid protein, mRNA (cDNA clone MGC:105415
            IMAGE:7314758), complete cds
          Length = 2960

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  taacagataaccaaccactc 195
            ||||||||||||||||||||
Sbjct: 2698 taacagataaccaaccactc 2717
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>ref|NM_030990.1| Rattus norvegicus proteolipid protein (Plp), mRNA
          Length = 3019

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  taacagataaccaaccactc 195
            ||||||||||||||||||||
Sbjct: 2813 taacagataaccaaccactc 2832
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>gb|AC158686.2| Mus musculus 10 BAC RP24-74G10 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 217129

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   tcacattttttaactaatca 252
             ||||||||||||||||||||
Sbjct: 93670 tcacattttttaactaatca 93651
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>emb|BX664736.8| Mouse DNA sequence from clone RP23-156G14 on chromosome X, complete
             sequence
          Length = 61268

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   aaaaatgttctaacagataa 185
             ||||||||||||||||||||
Sbjct: 12115 aaaaatgttctaacagataa 12134
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>gb|M11185.1|RATPLPX Rat brain myelin proteolipid protein (PLP) mRNA, complete cds
          Length = 3019

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  taacagataaccaaccactc 195
            ||||||||||||||||||||
Sbjct: 2813 taacagataaccaaccactc 2832
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>gb|M25888.1|RATPLPA Rat lipophilin mRNA, 3' end
          Length = 2585

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  taacagataaccaaccactc 195
            ||||||||||||||||||||
Sbjct: 2377 taacagataaccaaccactc 2396


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,292,852
Number of Sequences: 3902068
Number of extensions: 5292852
Number of successful extensions: 110432
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110231
Number of HSP's gapped (non-prelim): 201
length of query: 551
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 528
effective length of database: 17,143,297,704
effective search space: 9051661187712
effective search space used: 9051661187712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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