ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak4i11 |
|---|---|
| Clone Library Name | barley_pub |
>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC| 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) Length = 421 Score = 113 bits (282), Expect = 5e-25 Identities = 62/139 (44%), Positives = 90/139 (64%), Gaps = 1/139 (0%) Frame = -2 Query: 553 ARKNTHEDVKPLMLTNLNAFEIISFSTGFDLSGLFIQEECRKETRFTSDKPASAIISKLE 374 A N + + NLNAFEIIS STGFDLSGLF + E ++E RFTS++ AS I KL Sbjct: 288 AEGNASAEKEKKRCINLNAFEIISLSTGFDLSGLFEKGEEKEEMRFTSNREASEITEKLV 347 Query: 373 YVAKAMNLRVRKKDNGVVKMQTRKEGRNGAVQLDMEIFEITPSHHLIEMKQTGGDPLEYR 194 + K + ++VRKK++ + R + A ++ E+FEI PS+H++ +K++GGD EY+ Sbjct: 348 EIGKDLKMKVRKKEH-----EWRVKMSAEATVVEAEVFEIAPSYHMVVLKKSGGDTAEYK 402 Query: 193 ELL-EDIRPALKDIVWAWY 140 ++ E IRPAL D V AW+ Sbjct: 403 RVMKESIRPALIDFVLAWH 421
>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)| Length = 449 Score = 99.0 bits (245), Expect = 1e-20 Identities = 49/127 (38%), Positives = 81/127 (63%), Gaps = 1/127 (0%) Frame = -2 Query: 511 TNLNAFEIISFSTGFDLSGLF-IQEECRKETRFTSDKPASAIISKLEYVAKAMNLRVRKK 335 T++NAFE+IS + +L LF ++E ++ETRFTS P II+K+E AK + ++KK Sbjct: 316 TSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKK 375 Query: 334 DNGVVKMQTRKEGRNGAVQLDMEIFEITPSHHLIEMKQTGGDPLEYRELLEDIRPALKDI 155 N ++M+ K GR G + + E+F++ PS H++E+K+ GD LE+++ + LKD+ Sbjct: 376 -NYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDV 434 Query: 154 VWAWYGD 134 VW G+ Sbjct: 435 VWKCDGE 441
>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC| 2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein) Length = 446 Score = 73.9 bits (180), Expect = 4e-13 Identities = 44/134 (32%), Positives = 79/134 (58%), Gaps = 6/134 (4%) Frame = -2 Query: 532 DVKPLMLTNLNAFEIISFSTGFDLSGLFI--QEECRKETRFTSDKPASAIISKLEYVAKA 359 D PLM+ NAFE+I+ S G +LS LF Q+ +++TRF S + S II+ +E VA + Sbjct: 304 DEGPLMM---NAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANS 360 Query: 358 MNLRVRKKDNGVVKMQTRKEG----RNGAVQLDMEIFEITPSHHLIEMKQTGGDPLEYRE 191 M + ++ +TR EG + G + + +EI+E+ PS ++++++ G+ LEY + Sbjct: 361 MGFKSHTRN-----FKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHK 415 Query: 190 LLEDIRPALKDIVW 149 + + L++I+W Sbjct: 416 FYKKLCSKLENIIW 429
>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC| 2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related kinase 3.16) Length = 444 Score = 72.4 bits (176), Expect = 1e-12 Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 5/124 (4%) Frame = -2 Query: 511 TNLNAFEIISFSTGFDLSGLFIQEEC-RKETRFTSDKPASAIISKLEYVAKAMNLRVRKK 335 T +NAF++I S+ DLSG F QE + RFTS+ A ++ K+E M V+KK Sbjct: 316 TIINAFQLIGMSSFLDLSGFFEQENVSERRIRFTSNSSAKDLLEKIETAVTEMGFSVQKK 375 Query: 334 DNGVVKMQTRKEGRNGAVQLDM----EIFEITPSHHLIEMKQTGGDPLEYRELLEDIRPA 167 K++ ++E RN Q+ + E+FEI PS +++E++++ GD YR+L E + Sbjct: 376 H---AKLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQLYERL--- 429 Query: 166 LKDI 155 LKD+ Sbjct: 430 LKDV 433
>CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein kinase 11 (EC| 2.7.11.1) (SOS2-like protein kinase PKS5) (SOS-interacting protein 4) (SNF1-related kinase 3.22) Length = 435 Score = 58.5 bits (140), Expect = 2e-08 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 2/109 (1%) Frame = -2 Query: 508 NLNAFEIISFSTGFDLSGLF--IQEECRKETRFTSDKPASAIISKLEYVAKAMNLRVRKK 335 +LNAF++IS+S+G DLSGLF + RF S+K + ++E A+ NLR++KK Sbjct: 306 SLNAFDLISYSSGLDLSGLFAGCSNSSGESERFLSEKSPEMLAEEVEGFAREENLRMKKK 365 Query: 334 DNGVVKMQTRKEGRNGAVQLDMEIFEITPSHHLIEMKQTGGDPLEYREL 188 + EG+NG + + I + ++E ++ GGD Y+E+ Sbjct: 366 KEEEYGFE--MEGQNGKFGIGICISRLNDLLVVVEARRRGGDGDCYKEM 412
>ATU1_YEAST (P38360) Probable copper-transporting ATPase (EC 3.6.3.4)| (Cu(2+)-ATPase) Length = 1216 Score = 33.1 bits (74), Expect = 0.70 Identities = 14/62 (22%), Positives = 30/62 (48%) Frame = +2 Query: 74 RRTKTKYSRFQKXXXXXXVVISIPGPDYVLQRWPDVLQQLSVLQRITTCLFHLNEVVGRC 253 + T+ KY + VV+ D++ + WP + +L +++R ++ +V+G Sbjct: 470 KTTEFKYEQISNHGSTIDVVVPYAAKDFINEEWPQGVTELKIVERNIIRIYFDPKVIGAR 529 Query: 254 DL 259 DL Sbjct: 530 DL 531
>MTR1L_SHEEP (Q28558) Melatonin-related receptor (G protein-coupled receptor 50)| (H9) Length = 575 Score = 32.0 bits (71), Expect = 1.6 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 1/85 (1%) Frame = -1 Query: 368 REGDESQGKEEGQWRGK-DANEEGRKERCCSVRHGDLRDHTFPPPH*DETNRW*SAGVPR 192 RE E+Q + R + A+E+ C +V + P P +AG P Sbjct: 327 REMQEAQAHTHARARARTQAHEQDHAHACPAVEEIPMSVRNVPLPGHG------AAGQPE 380 Query: 191 AVGGHPASAEGHSLGLVWR*PPAAA 117 V GHP A GHS + R A+A Sbjct: 381 CVSGHPKPASGHSRSVSARRKSASA 405
>CHK1_YEAST (P38147) Serine/threonine-protein kinase CHK1 (EC 2.7.11.1)| (Checkpoint kinase 1) Length = 527 Score = 32.0 bits (71), Expect = 1.6 Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 16/115 (13%) Frame = -2 Query: 448 IQEECRKETRFTSDKPASAIISKLEYVAKAMNLRVRKK--------------DNGVVKMQ 311 +Q K T+F + +P ++ LE +RV+ DN + Sbjct: 409 LQFNPNKLTKFYTLQPMDVLLPILEKALNLSQIRVKPDLFANFERLCELLGYDNVFPLII 468 Query: 310 TRKEGRNGAVQL--DMEIFEITPSHHLIEMKQTGGDPLEYRELLEDIRPALKDIV 152 K NG QL + I +I + ++ GDPLE+R L + I +DI+ Sbjct: 469 NIKTKSNGGYQLCGSISIIKIEEELKSVGFERKTGDPLEWRRLFKKISTICRDII 523
>AKP8L_MOUSE (Q9R0L7) A-kinase anchor protein 8-like (AKAP8-like protein)| (Neighbor of A-kinase-anchoring protein 95) (Neighbor of AKAP95) Length = 642 Score = 31.2 bits (69), Expect = 2.7 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = -1 Query: 386 LEAGIRREGDESQGKEEGQWRGKDANEEG 300 +E G R +G++ +GKE+G+ GK+ E+G Sbjct: 323 MEKGSRVDGEDEEGKEDGREEGKEDPEKG 351
>AKP8L_HUMAN (Q9ULX6) A-kinase anchor protein 8-like (AKAP8-like protein)| (Neighbor of A-kinase anchoring protein 95) (Neighbor of AKAP95) (Homologous to AKAP95 protein) (HA95) (Helicase A-binding protein 95) (HAP95) Length = 646 Score = 30.8 bits (68), Expect = 3.5 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = -1 Query: 386 LEAGIRREGDESQGKEEGQWRGKDANEEG 300 +E G R +G++ +GKE+G+ GK+ E+G Sbjct: 322 VEKGSRVDGEDEEGKEDGREEGKEDPEKG 350
>FAHD1_MOUSE (Q8R0F8) Fumarylacetoacetate hydrolase domain-containing protein 1| (EC 3.-.-.-) Length = 227 Score = 30.8 bits (68), Expect = 3.5 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 7/77 (9%) Frame = -2 Query: 490 IISFSTGFDLSGLFIQEECRKE-------TRFTSDKPASAIISKLEYVAKAMNLRVRKKD 332 + ++ D++ +QEEC+K+ FTS P SA + K E + LR+ K Sbjct: 97 VAGYALCLDMTARDVQEECKKKGLPWTLAKSFTSSCPVSAFVPK-EKIPDPHALRLWLKV 155 Query: 331 NGVVKMQTRKEGRNGAV 281 NG + R+EG+ ++ Sbjct: 156 NG----ELRQEGKTSSM 168
>KIN1_YEAST (P13185) Protein kinase KIN1 (EC 2.7.11.1)| Length = 1064 Score = 30.4 bits (67), Expect = 4.6 Identities = 32/120 (26%), Positives = 45/120 (37%), Gaps = 1/120 (0%) Frame = -2 Query: 487 ISFSTGFDLSGLFIQEECRKETRFTSDKPASAIISKLEYVAKAMNLRVRKKDNGVVKMQT 308 I F L G F + TS KP + K+ +V + MN+ ++ G V MQ Sbjct: 883 IDFPRSLFLKGFF-------SVQTTSSKPLPIVRYKIMFVLRKMNIEFKEVKGGFVCMQ- 934 Query: 307 RKEGRNGAVQLDMEIFEITP-SHHLIEMKQTGGDPLEYRELLEDIRPALKDIVWAWYGDD 131 R N A + + I P SHH +Q L + K + YGDD Sbjct: 935 RFSSNNVAAKREGTPRSIMPLSHHESIRRQGSNKYSPSSPLTTNSIHQRKTSITETYGDD 994
>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel| [Contains: Glutamic acid-rich protein (GARP); Cyclic-nucleotide-gated cation channel 4 (CNG channel 4) (CNG-4) (Cyclic nucleotide-gated cation channel modulatory subunit)] Length = 1394 Score = 30.4 bits (67), Expect = 4.6 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 383 EAGIRREGDESQGKEEGQWRGKDANEEGRKE 291 E G +E +E + KEE + RGK+ E G KE Sbjct: 411 EEGGEKEDEEGREKEEEEGRGKEEEEGGEKE 441
>FULI_ACHFU (P35905) Fulicin precursor [Contains: Fulicin; Fucilin gene-related| peptide 1 (FGRP-1); Fucilin gene-related peptide 2 (FGRP-2); Fucilin gene-related peptide 3 (FGRP-3); Fucilin gene-related peptide 4 (FGRP-4); Fucilin gene-related peptide 5 ( Length = 357 Score = 30.0 bits (66), Expect = 6.0 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +1 Query: 127 GGHLHTRPRLCPSALAGCPPTALGTPADHH 216 G HLH+RP P L P A +PAD + Sbjct: 25 GNHLHSRPERSPIVLFSDAPHAAASPADEN 54
>CI076_HUMAN (Q9H9A7) Protein C9orf76| Length = 625 Score = 30.0 bits (66), Expect = 6.0 Identities = 11/27 (40%), Positives = 20/27 (74%) Frame = -2 Query: 232 EMKQTGGDPLEYRELLEDIRPALKDIV 152 EMKQ+ DPL+Y++ LE ++ +D++ Sbjct: 560 EMKQSKKDPLQYQKFLEGLQKCQRDLI 586
>CI076_MOUSE (Q9D4G9) Protein C9orf76 homolog| Length = 616 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Frame = -2 Query: 292 NGAVQLDME-IFEITPS---HHLIEMKQTGGDPLEYRELLEDIRPALKDIV 152 +G LD++ I EI S + + EMKQ DPL+Y+ LE ++ +D++ Sbjct: 527 DGTAYLDVDFIDEILTSMIGYSVPEMKQLRKDPLKYKTFLEGLQKCQRDLI 577
>SYL_LISIN (Q92AZ9) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 803 Score = 30.0 bits (66), Expect = 6.0 Identities = 22/67 (32%), Positives = 32/67 (47%) Frame = -2 Query: 622 LAVKERTPSENVTTNAPPTAGVRARKNTHEDVKPLMLTNLNAFEIISFSTGFDLSGLFIQ 443 L +E T +E VTT+A K H VK T N +E + F+TG +FI Sbjct: 633 LVTEEGTLAEKVTTDA----NANLEKAYHHMVK----TVTNHYENLRFNTGISQLMIFIN 684 Query: 442 EECRKET 422 E +++T Sbjct: 685 EAYKRDT 691
>SYL_LISMO (Q8Y6M4) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 803 Score = 29.6 bits (65), Expect = 7.8 Identities = 22/67 (32%), Positives = 32/67 (47%) Frame = -2 Query: 622 LAVKERTPSENVTTNAPPTAGVRARKNTHEDVKPLMLTNLNAFEIISFSTGFDLSGLFIQ 443 L +E T +E VTT+A K H VK T N +E + F+TG +FI Sbjct: 633 LVTEEGTLAEKVTTDA----NANLEKAYHHMVK----TVTNHYENLRFNTGISQLMIFIN 684 Query: 442 EECRKET 422 E +++T Sbjct: 685 EAYKQDT 691
>SYL_LISMF (Q71Z07) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 803 Score = 29.6 bits (65), Expect = 7.8 Identities = 22/67 (32%), Positives = 32/67 (47%) Frame = -2 Query: 622 LAVKERTPSENVTTNAPPTAGVRARKNTHEDVKPLMLTNLNAFEIISFSTGFDLSGLFIQ 443 L +E T +E VTT+A K H VK T N +E + F+TG +FI Sbjct: 633 LVTEEGTLAEKVTTDA----NANLEKAYHHMVK----TVTNHYENLRFNTGISQLMIFIN 684 Query: 442 EECRKET 422 E +++T Sbjct: 685 EAYKQDT 691
>CSTN2_MOUSE (Q9ER65) Calsyntenin-2 precursor| Length = 966 Score = 29.6 bits (65), Expect = 7.8 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Frame = -1 Query: 365 EGDESQGKEEGQWR---GKDANEEGRKERCCSVRHGDLRDHTFPPPH*DETNRW*SAGV 198 EG+E + EEG G D +EE +E VRHG + P E + W +AGV Sbjct: 907 EGEEEEEAEEGSSSSSSGSDDSEEEEEEGMGRVRHGQSGTSSQSP----ERSTWNTAGV 961 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,044,616 Number of Sequences: 219361 Number of extensions: 1909422 Number of successful extensions: 5825 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 5547 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5811 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
