ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| baak4e12 | 694 | AV910346 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4e11 | 519 | AV910345 | not_full | emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 | 401 | full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 165 | -- | --- | - | -- | --- | - |
| baak4e10 | 505 | AV910344 | not_full | ref|NM_195031.1| Oryza sativa (japonica cultivar-group) putative enolase (2-phospho-D-glycerate hydroylase) (OSJNAb0015J03.9), mRNA Length = 1287 | 500 | not_full | ENO_ORYSA (Q42971) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) (OSE1) Length = 446 | 300 | -- | --- | - | -- | --- | - |
| baak4e09 | 372 | AV910343 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4e08 | 439 | AV832511 | not_full | ref|NM_187698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2049 | 48 | not_full | YB03_SCHPO (P87145) Hypothetical protein C25H2.03 in chromosome II Length = 811 | 11 | -- | --- | - | -- | --- | - |
| baak4e07 | 416 | AV910342 | not_full | ref|XM_478772.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1227 | 57 | not_full | RRFC_SPIOL (P82231) Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (RRF) (CpFrr) (RRFHCP) Length = 271 | 233 | -- | --- | - | -- | --- | - |
| baak4e06 | 444 | AV910341 | not_full | emb|X91347.1|HVUDPGPP H.vulgare mRNA for UDP-glucose pyrophosphorylase Length = 1783 | 67 | not_full | UGPA_HORVU (Q43772) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 473 | 25 | -- | --- | - | -- | --- | - |
| baak4e05 | 534 | AV910340 | not_full | emb|AJ249847.1|LMU249847 Lolium multiflorum mRNA for cysteine protease (see1 gene) Length = 1345 | 117 | not_full | ALEU_HORVU (P05167) Thiol protease aleurain precursor (EC 3.4.22.16) Length = 362 | 205 | -- | --- | - | -- | --- | - |
| baak4e04 | 452 | AV910339 | not_full | gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full insert mRNA sequence Length = 1878 | 112 | not_full | GLYN_FLAPR (P49358) Serine hydroxymethyltransferase 2, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) Length = 517 | 358 | -- | --- | - | -- | --- | - |
| baak4e03 | 640 | AV910338 | not_full | gb|BT019044.1| Zea mays clone Contig565.F mRNA sequence Length = 879 | 17 | not_full | PEL8_ARATH (Q9M8Z8) Probable pectate lyase 8 precursor (EC 4.2.2.2) Length = 416 | 10 | -- | --- | - | -- | --- | - |
| baak4e02 | 622 | AV832510 | not_full | gb|BT018864.1| Zea mays clone EL01N0561A06.d mRNA sequence Length = 1855 | 42 | not_full | HEY1_HUMAN (Q9Y5J3) Hairy/enhancer-of-split related with YRPW motif 1 (Hairy and enhancer of split related 1) (HESR-1) (Cardiovascular helix-loop-helix factor 2) (HES-related repressor protein 2) (HERP2) Length = 304 | 3 | -- | --- | - | -- | --- | - |
| baak4d07 | 565 | AV910337 | not_full | gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 | 45 | not_full | SLIT2_RAT (Q9WVC1) Slit homolog 2 protein precursor (Slit-2) (Fragment) Length = 766 | 1 | -- | --- | - | -- | --- | - |
| baak4c23 | 471 | AV910336 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4c22 | 517 | AV910335 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 15 | not_full | TL26_ARATH (P82538) Thylakoid lumenal 25.6 kDa protein, chloroplast precursor Length = 230 | 23 | -- | --- | - | -- | --- | - |
| baak4c21 | 470 | AV910334 | not_full | ref|XM_472744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 | 500 | not_full | G3PA_TOBAC (P09043) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) (Fragment) Length = 392 | 255 | -- | --- | - | -- | --- | - |
| baak4c20 | 429 | AV910333 | not_full | emb|Y12068.1|HVCYSPINH H.vulgare mRNA for cystein proteinase inhibitor Length = 599 | 129 | not_full | CYT2_ORYSA (P20907) Cysteine proteinase inhibitor 2 (Oryzacystatin-2) (Oryzacystatin II) Length = 108 | 18 | -- | --- | - | -- | --- | - |
| baak4c18 | 629 | AV910332 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4c17 | 552 | AV910331 | not_full | gb|AF479054.1| Triticum aestivum cytochrome reductase mRNA, partial cds Length = 348 | 77 | not_full | UCRQ_SOLTU (P46269) Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein) Length = 71 | 12 | -- | --- | - | -- | --- | - |
| baak4c16 | 36 | AV832509 | not_full | gb|AC150204.30| Medicago truncatula clone mth2-69i3, complete sequence Length = 115027 | 1 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| baak4c15 | 453 | AV910330 | not_full | emb|X07780.1|TAFBP Wheat mRNA for fructose-1,6-bisphosphatase (EC 3.1.3.11) Length = 1399 | 52 | not_full | F16P1_WHEAT (P09195) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) Length = 409 | 60 | -- | --- | - | -- | --- | - |
| baak4c13 | 385 | AV910329 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 34 | not_full | CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) Length = 324 | 45 | -- | --- | - | -- | --- | - |
| baak4c12 | 596 | AV910328 | not_full | gb|BT017789.1| Zea mays clone EL01N0504E06.c mRNA sequence Length = 1255 | 24 | not_full | KPYC_SOLTU (P22200) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) Length = 510 | 103 | -- | --- | - | -- | --- | - |
| baak4c11 | 413 | AV910327 | not_full | gb|AY103974.1| Zea mays PCO123560 mRNA sequence Length = 1889 | 36 | not_full | G3PB_ARATH (P25857) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) Length = 447 | 16 | -- | --- | - | -- | --- | - |
| baak4c10 | 374 | AV910326 | not_full | gb|BT009171.1| Triticum aestivum clone wl1n.pk0105.h9:fis, full insert mRNA sequence Length = 1468 | 210 | not_full | GCST_SOLTU (P54260) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) Length = 406 | 70 | -- | --- | - | -- | --- | - |
| baak4c09 | 481 | AV910325 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4c08 | 213 | AV910324 | not_full | gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 | 14 | not_full | PCXB_ACIAD (P20372) Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) (3,4-PCD) Length = 241 | 3 | -- | --- | - | -- | --- | - |
| baak4c07 | 563 | AV910323 | not_full | gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 | 43 | not_full | SLIT2_RAT (Q9WVC1) Slit homolog 2 protein precursor (Slit-2) (Fragment) Length = 766 | 1 | -- | --- | - | -- | --- | - |
| baak4c06 | 146 | AV910322 | not_full | gb|U53153.1| Caenorhabditis elegans cosmid T19A5, complete sequence Length = 30722 | 33 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| baak4c05 | 511 | AV910321 | not_full | gb|BT009303.1| Triticum aestivum clone wlm1.pk0014.g10:fis, full insert mRNA sequence Length = 813 | 186 | not_full | ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein) (Zona occludens 1 protein) (Tight junction protein 1) Length = 1745 | 6 | -- | --- | - | -- | --- | - |
| baak4c04 | 582 | AV910320 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4c03 | 495 | AV910319 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4c02 | 526 | AV910318 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 408 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 166 | -- | --- | - | -- | --- | - |
| baak4c01 | 525 | AV910317 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4b24 | 664 | AV910316 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 432 | full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 164 | -- | --- | - | -- | --- | - |
| baak4b23 | 315 | AV910315 | not_full | ref|NM_190005.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2136 | 20 | not_full | VA43_VARV (P33855) Protein A43 Length = 195 | 9 | -- | --- | - | -- | --- | - |
| baak4b22 | 480 | AV910314 | not_full | gb|AY103557.1| Zea mays PCO070710 mRNA sequence Length = 1761 | 198 | not_full | ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) Length = 388 | 63 | -- | --- | - | -- | --- | - |
| baak4b20 | 246 | AV910313 | not_full | emb|X60158.1|HVPSAG H.vulgare PsaG mRNA Length = 724 | 38 | not_full | PSAG_HORVU (Q00327) Photosystem I reaction center subunit V, chloroplast precursor (PSI-G) (Photosystem I 9 kDa protein) Length = 143 | 13 | -- | --- | - | -- | --- | - |
| baak4b19 | 389 | AV910312 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 63 | not_full | CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) Length = 324 | 66 | -- | --- | - | -- | --- | - |
| baak4b18 | 553 | AV910311 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 393 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 169 | -- | --- | - | -- | --- | - |
| baak4b17 | 576 | AV910310 | not_full | gb|AY596553.1| Saccharum officinarum clone SCUTLR1058C02, complete sequence Length = 1732 | 87 | not_full | REFR_SWPVK (Q08517) Rifampicin resistance protein (62 kDa protein) Length = 551 | 7 | -- | --- | - | -- | --- | - |
| baak4b16 | 492 | AV910309 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 66 | not_full | XYLT_DROPS (Q5QQ53) Xylosyltransferase oxt (EC 2.4.2.26) (Peptide O-xylosyltransferase) Length = 880 | 20 | -- | --- | - | -- | --- | - |
| baak4b13 | 347 | AV910308 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4b12 | 653 | AV910307 | not_full | ref|NM_187739.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1692 | 89 | not_full | PPOC_ARATH (P55826) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO) Length = 537 | 19 | -- | --- | - | -- | --- | - |
| baak4b11 | 600 | AV910306 | not_full | dbj|AK067777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O03, full insert sequence Length = 3581 | 179 | not_full | ODO1_YEAST (P20967) 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1014 | 50 | -- | --- | - | -- | --- | - |
| baak4b10 | 443 | AV910305 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 397 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 162 | -- | --- | - | -- | --- | - |
| baak4b08 | 604 | AV910304 | not_full | emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 | 169 | not_full | RUBB_SECCE (Q43831) RuBisCO large subunit-binding protein subunit beta, chloroplast (60 kDa chaperonin subunit beta) (CPN-60 beta) (Fragment) Length = 499 | 414 | -- | --- | - | -- | --- | - |
| baak4b07 | 334 | AV910303 | not_full | ref|XM_450550.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1181 | 56 | not_full | AAPC_PENCL (Q40784) Putative apospory-associated protein C Length = 329 | 27 | -- | --- | - | -- | --- | - |
| baak4b06 | 567 | AV910302 | not_full | emb|X68655.1|HVCW18 H.vulgare Cw-18 mRNA Length = 732 | 500 | not_full | NLTP8_HORVU (Q43871) Nonspecific lipid-transfer protein Cw18 precursor (LTP Cw-18) (PKG2316) Length = 115 | 74 | -- | --- | - | -- | --- | - |
| baak4b05 | 723 | AV910301 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 129 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 31 | -- | --- | - | -- | --- | - |
| baak4b04 | 509 | AV910300 | not_full | gb|AY103602.1| Zea mays PCO093211 mRNA sequence Length = 1490 | 500 | not_full | G3PA_SINAL (P09672) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) (Fragment) Length = 233 | 259 | -- | --- | - | -- | --- | - |
