>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase
           (RUBISCO) gene, complete cds
          Length = 779

 Score =  196 bits (99), Expect = 2e-47
 Identities = 164/184 (89%), Gaps = 5/184 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   aagtgcaagttgaagtaaccgatatacatgctatgttagttcacattggttggtcggcag 63
           ||||||||||||||||||||||||||||||  |||||||| || ||| ||    |||| |
Sbjct: 585 aagtgcaagttgaagtaaccgatatacatgtcatgttagt-caaatttgt----cggcgg 639

                                                                       
Query: 64  ctctgctttctcaattttacttctcgttccaatcatatgtgaatatacgagcatatgtat 123
           ||||||||||||| ||||||||||||||| | ||||||||||||||| || |||||||||
Sbjct: 640 ctctgctttctcagttttacttctcgttctactcatatgtgaatatatgaacatatgtat 699

                                                                       
Query: 124 ttaagcacctaccaacgtaggccgagaaggatgcatatgagaatcatagcaccggctata 183
            |||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||
Sbjct: 700 gtaagcacctaccaatgtaggtcgaggaggatgcatatgagaattatagcaccggctata 759

               
Query: 184 cata 187
           ||||
Sbjct: 760 cata 763

>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5
          Length = 845

 Score =  133 bits (67), Expect = 2e-28
 Identities = 138/159 (86%), Gaps = 6/159 (3%)
 Strand = Plus / Plus

                                                                       
Query: 2   taaagtgcaagttgaagtaaccgatatacatgctatgttagttcacattggttggtcggc 61
           |||||||||||||||||||||| |||||||||| |||||||||||||    || ||||||
Sbjct: 593 taaagtgcaagttgaagtaacccatatacatgccatgttagttcaca----tttgtcggc 648

                                                                       
Query: 62  agctctgctttctcaattttacttctcgttccaatcatatgtgaatatacgagcatatgt 121
           ||||||||| ||||   ||||||||||| || |  |||||||||||||| ||||||||||
Sbjct: 649 agctctgctatctc-ggtttacttctcg-tctacccatatgtgaatatatgagcatatgt 706

                                                  
Query: 122 atttaagcacctaccaacgtaggccgagaaggatgcata 160
           || |||||||||||||| ||||| |||  ||||||||||
Sbjct: 707 atgtaagcacctaccaatgtaggtcgangaggatgcata 745

>gb|AY426991.1| Hordeum vulgare clone ABC311-506 sequence
          Length = 506

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 36 atgttagttcacattggttgg 56
          |||||||||||||||||||||
Sbjct: 21 atgttagttcacattggttgg 1

>ref|XM_477130.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 201

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ccaatcatatgtgaatatac 111
           ||||||||||||||||||||
Sbjct: 178 ccaatcatatgtgaatatac 197

>gb|AC102622.7| Mus musculus chromosome 3, clone RP23-434O10, complete sequence
          Length = 237899

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     gtaaagtgcaagttgaagta 20
             ||||||||||||||||||||
Sbjct: 96073 gtaaagtgcaagttgaagta 96054

>gb|AY426993.1| Hordeum vulgare clone ABC311-628 sequence
          Length = 628

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 37 tgttagttcacattggttgg 56
          ||||||||||||||||||||
Sbjct: 20 tgttagttcacattggttgg 1

>gb|AY426992.1| Hordeum vulgare clone ABC311-593 sequence
          Length = 593

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 37 tgttagttcacattggttgg 56
          ||||||||||||||||||||
Sbjct: 20 tgttagttcacattggttgg 1

>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     acatacttcgtttgcagctg 202
               ||||||||||||||||||||
Sbjct: 1947674 acatacttcgtttgcagctg 1947655

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 92      ccaatcatatgtgaatatac 111
               ||||||||||||||||||||
Sbjct: 6060600 ccaatcatatgtgaatatac 6060581

>emb|AL844604.4| Mouse DNA sequence from clone RP24-318C20 on chromosome 4, complete
             sequence
          Length = 173133

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    ctgctttctcaattttactt 85
             ||||||||||||||||||||
Sbjct: 67173 ctgctttctcaattttactt 67192

>emb|AL773520.3| Mouse DNA sequence from clone RP23-350F23 on chromosome 4, complete
             sequence
          Length = 214496

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    ctgctttctcaattttactt 85
             ||||||||||||||||||||
Sbjct: 45265 ctgctttctcaattttactt 45284

>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0008C11
          Length = 157205

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     ccaatcatatgtgaatatac 111
              ||||||||||||||||||||
Sbjct: 115770 ccaatcatatgtgaatatac 115751

>emb|AL683824.8| Mouse DNA sequence from clone RP23-90O18 on chromosome 3, complete
              sequence
          Length = 233589

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      gtaaagtgcaagttgaagta 20
              ||||||||||||||||||||
Sbjct: 183364 gtaaagtgcaagttgaagta 183383

>emb|AL627205.12| Mouse DNA sequence from clone RP23-41E14 on chromosome 11, complete
             sequence
          Length = 223794

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aagtgcaagttgaagtaacc 23
             ||||||||||||||||||||
Sbjct: 95894 aagtgcaagttgaagtaacc 95913


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,512,710
Number of Sequences: 3902068
Number of extensions: 1512710
Number of successful extensions: 99478
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99405
Number of HSP's gapped (non-prelim): 71
length of query: 213
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 191
effective length of database: 17,147,199,772
effective search space: 3275115156452
effective search space used: 3275115156452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)