ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4b05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 1322 bits (667), Expect = 0.0 Identities = 719/729 (98%), Gaps = 8/729 (1%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 955 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 1014 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1015 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 1074 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1075 accgacaatgtctgtgacgagtctgtcgtaaagatcgtcgacaccttcccaggacaatcc 1134 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1135 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 1194 Query: 242 ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1195 ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 1254 Query: 302 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1255 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 1314 Query: 362 caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1315 caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 1374 Query: 422 ctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1375 ctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctc 1434 Query: 482 catac-acacccaccatctcttgctgcat---aggaggtaaaggagcacagcaaggtact 537 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1435 catacaacacccaccatctcttgctgcataggaggaggtaaaggagcacagcaaggtact 1494 Query: 538 ttgcccg-tgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaag 596 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1495 ttgcccgatgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaag 1554 Query: 597 gagcgacg-acggcagctgcctttacaccttttaagcatgccacttttaatatctgatgt 655 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1555 gagcgacgaacggcagctgcctttacaccttttaagcatgccacttttaatatctgatgt 1614 Query: 656 tttacctac-ctaagtccgcatcgcatccaagcgattgctgggcatggttttgttaatat 714 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1615 tttacctacactaagtccgcatcgcatccaagcgattgctgggcat-gttttgttaatat 1673 Query: 715 atctctaaa 723 ||||||||| Sbjct: 1674 atctctaaa 1682
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 1066 bits (538), Expect = 0.0 Identities = 681/724 (94%), Gaps = 11/724 (1%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 25 gtcactggtaacgatttctcgacgttgtacgcccctctgatccgtgatggtcgtatggag 84 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 85 aagttctactgggctcccacccgcgacgaccgtatcggtgtctgcaagggtatcttccag 144 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 145 accgacaatgtcagcgacgagtccgtcgtcaagatcgtcgacaccttcccaggacaatcc 204 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 241 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 205 atcgactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtg 264 Query: 242 ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 301 ||||||||| ||||||||||||||||||| ||||||||||||||||||||| || ||| Sbjct: 265 acctctaccggtatcgagaacattggcaagaagctggtgaactcgcgggacggaccagtg 324 Query: 302 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 361 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 325 acctttgagcagccaaagatgacagtggagaagctgctagagtacgggcacatgctcgtc 384 Query: 362 caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 444 Query: 422 ctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctc 481 |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 445 ctgggtgatgctaaccaggatgcgatgaagactggtaccttctacggttagaacattctc 504 Query: 482 catacacacccaccatctcttgctgcat---aggaggtaaaggagcacagcaaggtactt 538 |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 505 catacacacccaccatctcttgctgcataggaggaggtaaaggggcacagcaaggtactt 564 Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| || |||| ||| ||||||||||| | ||||||||||| |||||||||||| |||| Sbjct: 565 tgcctgtaccggcaggatgcaccgaccagactgccaagaacttcgacccaacggcgagga 624 Query: 599 gcgacgacggcagctgcctttacaccttttaagcatgccacttttaatatctgatgtttt 658 | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 625 gtgacgacggcagctgcctttacaccttttaagcatgcca-atttaatatctgatgtttt 683 Query: 659 acc-----tacctaagt-ccgcatcgcatccaagcgattgctgggcatggttttgttaat 712 | | ||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 684 atcctttgtacctaagtaccgcatcgcatccaagcgattgctgggcat-gttttgttaat 742 Query: 713 atat 716 |||| Sbjct: 743 atat 746
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 1066 bits (538), Expect = 0.0 Identities = 681/724 (94%), Gaps = 11/724 (1%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 875 gtcactggtaacgatttctcgacgttgtacgcccctctgatccgtgatggtcgtatggag 934 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 935 aagttctactgggctcccacccgcgacgaccgtatcggtgtctgcaagggtatcttccag 994 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 995 accgacaatgtcagcgacgagtccgtcgtcaagatcgtcgacaccttcccaggacaatcc 1054 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 241 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1055 atcgactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtg 1114 Query: 242 ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 301 ||||||||| ||||||||||||||||||| ||||||||||||||||||||| || ||| Sbjct: 1115 acctctaccggtatcgagaacattggcaagaagctggtgaactcgcgggacggaccagtg 1174 Query: 302 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 361 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1175 acctttgagcagccaaagatgacagtggagaagctgctagagtacgggcacatgctcgtc 1234 Query: 362 caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1235 caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 1294 Query: 422 ctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctc 481 |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 1295 ctgggtgatgctaaccaggatgcgatgaagactggtaccttctacggttagaacattctc 1354 Query: 482 catacacacccaccatctcttgctgcat---aggaggtaaaggagcacagcaaggtactt 538 |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 1355 catacacacccaccatctcttgctgcataggaggaggtaaaggggcacagcaaggtactt 1414 Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| || |||| ||| ||||||||||| | ||||||||||| |||||||||||| |||| Sbjct: 1415 tgcctgtaccggcaggatgcaccgaccagactgccaagaacttcgacccaacggcgagga 1474 Query: 599 gcgacgacggcagctgcctttacaccttttaagcatgccacttttaatatctgatgtttt 658 | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1475 gtgacgacggcagctgcctttacaccttttaagcatgcca-atttaatatctgatgtttt 1533 Query: 659 acc-----tacctaagt-ccgcatcgcatccaagcgattgctgggcatggttttgttaat 712 | | ||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1534 atcctttgtacctaagtaccgcatcgcatccaagcgattgctgggcat-gttttgttaat 1592 Query: 713 atat 716 |||| Sbjct: 1593 atat 1596
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 912 bits (460), Expect = 0.0 Identities = 466/468 (99%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 759 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 819 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 820 accgacaatgtctgtgacgagtctgtcgtaaagatcgtcgacaccttcccaggacaatcc 879 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 939 Query: 242 ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 940 ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 999 Query: 302 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1000 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 1059 Query: 362 caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1060 caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 1119 Query: 422 ctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 469 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1120 ctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 1167 Score = 400 bits (202), Expect = e-108 Identities = 209/210 (99%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 514 ggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatgcc 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1165 ggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatgcc 1224 Query: 574 aagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaagca 633 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1225 aagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaagca 1284 Query: 634 tgccacttttaatatctgatgttttacctacctaagtccgcatcgcatccaagcgattgc 693 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1285 tgccacttttaatatctgatgttttacctacctaagtccgcatcgcatccaagcgattgc 1344 Query: 694 tgggcatggttttgttaatatatctctaaa 723 ||||||| |||||||||||||||||||||| Sbjct: 1345 tgggcat-gttttgttaatatatctctaaa 1373
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 821 bits (414), Expect = 0.0 Identities = 639/710 (90%), Gaps = 12/710 (1%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 886 gtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgtgacggtcgtatggag 945 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 946 aagttctactgggcgcccacccgcgaggaccgtatcggcgtctgcaagggtatcttccag 1005 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1006 accgacaacgtcagcgacgagtctgtcgtcaagatcgtcgacacnttcccaggacagtcc 1065 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 241 || ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1066 atcgacttcttcggtgctctgcgtgctcgggtgtacgacgttgaggtgcgcaagtgggtg 1125 Query: 242 ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 301 || |||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1126 tcgtccaccggaattgagaacatcggcaagaggctggtgaactcgcgggacggacccgtc 1185 Query: 302 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 361 |||||||||||||| |||||||| || |||||| |||| |||||||| |||||||| ||| Sbjct: 1186 accttcgagcagcccaagatgacggtggagaagttgctggagtacggccacatgcttgtc 1245 Query: 362 caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 421 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1246 caggagcaggacaatgtcaagcgtgtgcagcttgcggacacttacatgagccaggcagct 1305 Query: 422 ctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctc 481 ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 1306 ctgggtgatgcgaacaaggatgccatgaagactggttccttctacggttagaacactctt 1365 Query: 482 catacacacccaccatctcttgctgcat---aggaggtaaaggagcacagcaaggtactt 538 ||| ||||||||||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct: 1366 cat--acacccaccatctcttgctgcataggaggaggtaaaggagcacaacaaggcactt 1423 Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||| ||||||| |||||||||||| ||||||||| || |||| Sbjct: 1424 tgcctgtgccggaaggttgtaccgaccgggatgccaagaacttcgacccaaccgcgagga 1483 Query: 599 gcgacgacggcagctgcctttacaccttttaagcatgccacttttaata-tctgatgttt 657 |||||||||||||||||||||||||||||||||||||||||||| | || |||||||||| Sbjct: 1484 gcgacgacggcagctgcctttacaccttttaagcatgccactttaattattctgatgttt 1543 Query: 658 tac-----ctacctaag-tccgcatcgcatccaagcgattgctgggcatg 701 || |||||||| ||||||||||| ||||||| ||||||||||| Sbjct: 1544 cactctttgtacctaagcaccgcatcgcatacaagcgactgctgggcatg 1593
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 656 bits (331), Expect = 0.0 Identities = 331/331 (100%) Strand = Plus / Plus Query: 185 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080 Query: 245 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7081 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 7140 Query: 305 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7141 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 7200 Query: 365 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7201 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 7260 Query: 425 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7261 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 7320 Query: 485 acacacccaccatctcttgctgcataggagg 515 ||||||||||||||||||||||||||||||| Sbjct: 7321 acacacccaccatctcttgctgcataggagg 7351 Score = 404 bits (204), Expect = e-109 Identities = 211/212 (99%), Gaps = 1/212 (0%) Strand = Plus / Plus Query: 512 gaggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatg 571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7523 gaggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatg 7582 Query: 572 ccaagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaag 631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7583 ccaagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaag 7642 Query: 632 catgccacttttaatatctgatgttttacctacctaagtccgcatcgcatccaagcgatt 691 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7643 catgccacttttaatatctgatgttttacctacctaagtccgcatcgcatccaagcgatt 7702 Query: 692 gctgggcatggttttgttaatatatctctaaa 723 ||||||||| |||||||||||||||||||||| Sbjct: 7703 gctgggcat-gttttgttaatatatctctaaa 7733 Score = 365 bits (184), Expect = 1e-97 Identities = 184/184 (100%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6697 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 6756 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6757 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 6816 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6817 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 6876 Query: 182 attg 185 |||| Sbjct: 6877 attg 6880 Score = 180 bits (91), Expect = 4e-42 Identities = 205/243 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||||||||| |||||||| ||||||||||| || || |||||| Sbjct: 3570 gtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatggag 3629 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||||| Sbjct: 3630 aagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaagggcatcttccgc 3689 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| | || || | | | || ||||||||||| || || ||| Sbjct: 3690 accgacaacgtcccggacgaggccgtggtgaggctggtggacaccttcccggggcagtcc 3749 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 241 || ||||| ||||| || ||||| || |||||||||||||| |||||||||||||||||| Sbjct: 3750 atcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtc 3809 Query: 242 ggc 244 ||| Sbjct: 3810 ggc 3812 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 305 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 364 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 3873 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 3932 Query: 365 gagcaggacaatgtcaagcgtgtgcagct 393 |||||||| || ||||||||||||||||| Sbjct: 3933 gagcaggagaacgtcaagcgtgtgcagct 3961
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 595 bits (300), Expect = e-167 Identities = 426/468 (91%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| || |||||||| ||||| || || || | ||| |||||||||||| Sbjct: 896 gtcaccggcaacgacttttcgacgctgtacgccccccttattcctgacggtcgtatggag 955 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||| |||||||| |||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 956 aagttttactgggcgcccacccgcgaggaccgtatcggcgtctgcaagggtatcttccag 1015 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1016 accgacaacgtcagcgacgagtctgtcgtcaagatcgtcgacaccttcccaggacagtcc 1075 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 241 || ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1076 atcgacttcttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtg 1135 Query: 242 ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 301 || |||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1136 tcgtccaccggaattgagaacatcggcaagaggctggtgaactcgcgggacggacccgtc 1195 Query: 302 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 361 |||||||||||||| |||||||| || |||||| |||| |||||||| |||||||| ||| Sbjct: 1196 accttcgagcagcccaagatgacggtggagaagttgctggagtacggccacatgcttgtc 1255 Query: 362 caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 421 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1256 caggagcaggacaatgtcaagcgtgtgcagcttgcggacacttacatgagccaggcagct 1315 Query: 422 ctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 469 ||||||||||| ||| ||||||| |||||||||||||||||||||||| Sbjct: 1316 ctgggtgatgcgaacaaggatgccatgaagactggttccttctacggt 1363 Score = 176 bits (89), Expect = 7e-41 Identities = 119/129 (92%) Strand = Plus / Plus Query: 514 ggtaaaggagcacagcaaggtactttgcccgtgccggaaggttgcaccgaccaaaatgcc 573 |||||||||||||| ||||| |||||||| |||||||||||||| ||||||| ||||| Sbjct: 1361 ggtaaaggagcacaacaaggcactttgcctgtgccggaaggttgtaccgaccgggatgcc 1420 Query: 574 aagaactacgacccaacggcaaggagcgacgacggcagctgcctttacaccttttaagca 633 ||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 1421 aagaacttcgacccaaccgcgaggagcgacgacggcagctgcctttacaccttttaagca 1480 Query: 634 tgccacttt 642 ||||||||| Sbjct: 1481 tgccacttt 1489
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase (rba1 gene) Length = 321 Score = 521 bits (263), Expect = e-144 Identities = 296/307 (96%) Strand = Plus / Plus Query: 185 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 244 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 2 gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacc 61 Query: 245 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 304 |||||||| ||||||||||||||||||| ||| ||||||||||||||||| || |||||| Sbjct: 62 tctaccggtatcgagaacattggcaagaagcttgtgaactcgcgggacggaccagtgacc 121 Query: 305 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 364 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 tttgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 181 Query: 365 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 241 Query: 425 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 484 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 242 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaacattctccat 301 Query: 485 acacacc 491 ||||||| Sbjct: 302 acacacc 308
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 212 bits (107), Expect = 1e-51 Identities = 206/239 (86%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 848 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 907 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 908 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 967 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 968 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1027 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1028 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1086 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 1426 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1485 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 1486 gcgacgacggcagctgcctttacaccttttaagca 1520 Score = 123 bits (62), Expect = 9e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1103 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1162 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1163 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 1222 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1223 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1282 Query: 437 caggatgcgatgaagactggttccttctacggtt 470 || || ||||||||||||||||||||||||| Sbjct: 1283 tccgacgccatgaagactggttccttctacggtt 1316
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 212 bits (107), Expect = 1e-51 Identities = 206/239 (86%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 843 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 902 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 903 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 962 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 963 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1022 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1023 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1081 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 1336 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1395 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 1396 gcgacgacggcagctgcctttacaccttttaagca 1430 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1098 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1157 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1158 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1217 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1218 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1277 Query: 437 caggatgcgatgaagactggttccttctacgg 468 || || ||||||||||||||||||||||| Sbjct: 1278 tccgacgccatgaagactggttccttctacgg 1309
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 212 bits (107), Expect = 1e-51 Identities = 206/239 (86%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 97 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 156 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 157 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 216 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 217 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 276 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 277 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 335 Score = 123 bits (62), Expect = 9e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 352 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 411 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 412 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 471 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 472 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 531 Query: 437 caggatgcgatgaagactggttccttctacggtt 470 || || ||||||||||||||||||||||||| Sbjct: 532 tccgacgccatgaagactggttccttctacggtt 565
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 212 bits (107), Expect = 1e-51 Identities = 206/239 (86%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 891 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 950 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 951 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 1010 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 1011 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1070 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1071 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1129 Score = 123 bits (62), Expect = 9e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1146 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1205 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1206 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1265 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1266 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1325 Query: 437 caggatgcgatgaagactggttccttctacggtt 470 || || ||||||||||||||||||||||||| Sbjct: 1326 tccgacgccatgaagactggttccttctacggtt 1359 Score = 117 bits (59), Expect = 5e-23 Identities = 87/95 (91%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||| | |||||||||||| |||| Sbjct: 1469 tgcctgtgccggaaggttgcaccgaccctgttgccaagaatt-cgacccaacggcgagga 1527 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 1528 gcgacgacggcagctgcctttacaccttttaagca 1562
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 212 bits (107), Expect = 1e-51 Identities = 206/239 (86%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 842 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 901 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 902 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 961 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 962 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1021 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1022 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1080 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 1420 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1479 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 1480 gcgacgacggcagctgcctttacaccttttaagca 1514 Score = 123 bits (62), Expect = 9e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1097 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1156 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1157 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1216 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1217 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1276 Query: 437 caggatgcgatgaagactggttccttctacggtt 470 || || ||||||||||||||||||||||||| Sbjct: 1277 tccgacgccatgaagactggttccttctacggtt 1310
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 212 bits (107), Expect = 1e-51 Identities = 206/239 (86%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 880 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 939 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 940 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 999 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 1000 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1059 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1060 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1118 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 1458 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1517 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 1518 gcgacgacggcagctgcctttacaccttttaagca 1552 Score = 123 bits (62), Expect = 9e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1135 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1194 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1195 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1254 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1255 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1314 Query: 437 caggatgcgatgaagactggttccttctacggtt 470 || || ||||||||||||||||||||||||| Sbjct: 1315 tccgacgccatgaagactggttccttctacggtt 1348
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 212 bits (107), Expect = 1e-51 Identities = 206/239 (86%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 879 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 938 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 939 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 998 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 999 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1058 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1059 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1117 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 1457 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1516 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 1517 gcgacgacggcagctgcctttacaccttttaagca 1551 Score = 123 bits (62), Expect = 9e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1134 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1193 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1194 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1253 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1254 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1313 Query: 437 caggatgcgatgaagactggttccttctacggtt 470 || || ||||||||||||||||||||||||| Sbjct: 1314 tccgacgccatgaagactggttccttctacggtt 1347
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 212 bits (107), Expect = 1e-51 Identities = 206/239 (86%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 663 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 722 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 723 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 782 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 783 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 842 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 843 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 901 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 1241 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1300 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 1301 gcgacgacggcagctgcctttacaccttttaagca 1335 Score = 123 bits (62), Expect = 9e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 918 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 977 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 978 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1037 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1038 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1097 Query: 437 caggatgcgatgaagactggttccttctacggtt 470 || || ||||||||||||||||||||||||| Sbjct: 1098 tccgacgccatgaagactggttccttctacggtt 1131
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 212 bits (107), Expect = 1e-51 Identities = 206/239 (86%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 884 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 943 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 944 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 1003 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 1004 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1063 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1064 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1122 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 1462 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1521 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 1522 gcgacgacggcagctgcctttacaccttttaagca 1556 Score = 123 bits (62), Expect = 9e-25 Identities = 176/214 (82%) Strand = Plus / Plus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1139 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1198 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1199 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1258 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1259 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1318 Query: 437 caggatgcgatgaagactggttccttctacggtt 470 || || ||||||||||||||||||||||||| Sbjct: 1319 tccgacgccatgaagactggttccttctacggtt 1352
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 212 bits (107), Expect = 1e-51 Identities = 206/239 (86%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 878 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 937 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 938 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 997 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 998 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1057 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 || || || ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1058 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1116 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 1371 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 1430 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 1431 gcgacgacggcagctgcctttacaccttttaagca 1465 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 1133 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1192 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 1193 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1252 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 1253 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1312 Query: 437 caggatgcgatgaagactggttccttctacgg 468 || || ||||||||||||||||||||||| Sbjct: 1313 tccgacgccatgaagactggttccttctacgg 1344
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 198 bits (100), Expect = 2e-47 Identities = 319/392 (81%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||||||||| ||||| || || ||||| || || || |||||| Sbjct: 851 gtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgggacggccgcatggag 910 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||||| Sbjct: 911 aagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaagggcatcttccgc 970 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| | || || | | | || ||||||||||| || || ||| Sbjct: 971 accgacaacgtccccgacgaggccgtggtgaggctggtggacaccttcccggggcagtcc 1030 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 241 || ||||| ||||| || ||||| || |||||||||||||| |||||||||||||||||| Sbjct: 1031 atcgacttcttcggcgcgctgcgggcgcgggtgtacgacgacgaggtgcgcaagtgggtc 1090 Query: 242 ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 301 ||| | ||| |||||||||| |||| |||| || ||||| |||| ||||| | Sbjct: 1091 ggcgagatcggcgtcgagaacatctccaagcggctcgtcaactccagggaggggccgccg 1150 Query: 302 accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 361 || ||||| ||||| |||||||| |||||||||| | |||||||| |||||||| ||| Sbjct: 1151 acgttcgaccagcccaagatgaccatcgagaagctcatggagtacggccacatgctggtc 1210 Query: 362 caggagcaggacaatgtcaagcgtgtgcagct 393 ||||||||||| || || ||||| |||||||| Sbjct: 1211 caggagcaggagaacgtgaagcgcgtgcagct 1242
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 180 bits (91), Expect = 4e-42 Identities = 205/243 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||||||||| |||||||| ||||||||||| || || |||||| Sbjct: 1001 gtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatggag 1060 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||||| Sbjct: 1061 aagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaagggcatcttccgc 1120 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| | || || | | | || ||||||||||| || || ||| Sbjct: 1121 accgacaacgtcccggacgaggccgtggtgaggctggtggacaccttcccggggcagtcc 1180 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 241 || ||||| ||||| || ||||| || |||||||||||||| |||||||||||||||||| Sbjct: 1181 atcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtc 1240 Query: 242 ggc 244 ||| Sbjct: 1241 ggc 1243 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 305 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 364 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 1304 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 1363 Query: 365 gagcaggacaatgtcaagcgtgtgcagct 393 |||||||| || ||||||||||||||||| Sbjct: 1364 gagcaggagaacgtcaagcgtgtgcagct 1392
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 170 bits (86), Expect = 4e-39 Identities = 158/182 (86%) Strand = Plus / Minus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 108869 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 108810 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 108809 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 108750 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 108749 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 108690 Query: 182 at 183 || Sbjct: 108689 at 108688 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 107252 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 107193 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 107192 gcgacgacggcagctgcctttacaccttttaagca 107158 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 108522 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 108463 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 108462 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 108403 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 108402 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 108343 Query: 437 caggatgcgatgaagactggttccttctacggttaga 473 || || |||||||||||||||||||||||||||| Sbjct: 108342 tccgacgccatgaagactggttccttctacggttaga 108306 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 56 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 115 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460 Query: 116 ttcc 119 |||| Sbjct: 112459 ttcc 112456 Score = 54.0 bits (27), Expect = 7e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 541 cccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagc 600 |||||||||| || |||||||||||| ||| ||||||||||| || || |||||| Sbjct: 112127 cccgtgccggcgggatgcaccgaccaacgcgccgccaactacgaccctaccgccaggagc 112068 Query: 601 gacgacggcagctgc 615 ||||||||||||||| Sbjct: 112067 gacgacggcagctgc 112053 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 191 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 108588 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 257 gagaacattggcaagaggctggtgaactc 285 |||||||| |||| ||||||||||||||| Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 170 bits (86), Expect = 4e-39 Identities = 158/182 (86%) Strand = Plus / Minus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 30746 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 30687 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 30686 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 30627 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 30626 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 30567 Query: 182 at 183 || Sbjct: 30566 at 30565 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 29133 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 29074 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 29073 gcgacgacggcagctgcctttacaccttttaagca 29039 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 30399 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 30340 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 30339 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 30280 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 30279 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 30220 Query: 437 caggatgcgatgaagactggttccttctacggttaga 473 || || |||||||||||||||||||||||||||| Sbjct: 30219 tccgacgccatgaagactggttccttctacggttaga 30183 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 56 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 115 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337 Query: 116 ttcc 119 |||| Sbjct: 34336 ttcc 34333 Score = 54.0 bits (27), Expect = 7e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 541 cccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagc 600 |||||||||| || |||||||||||| ||| ||||||||||| || || |||||| Sbjct: 34004 cccgtgccggcgggatgcaccgaccaacgcgccgccaactacgaccctaccgccaggagc 33945 Query: 601 gacgacggcagctgc 615 ||||||||||||||| Sbjct: 33944 gacgacggcagctgc 33930 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 191 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 30465 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 257 gagaacattggcaagaggctggtgaactc 285 |||||||| |||| ||||||||||||||| Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 170 bits (86), Expect = 4e-39 Identities = 158/182 (86%) Strand = Plus / Minus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 28304008 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 28303949 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 28303948 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 28303889 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 28303888 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 28303829 Query: 182 at 183 || Sbjct: 28303828 at 28303827 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 28302395 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 28302336 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 28302335 gcgacgacggcagctgcctttacaccttttaagca 28302301 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28303602 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 28303601 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28303542 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 28303541 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28303482 Query: 437 caggatgcgatgaagactggttccttctacggttaga 473 || || |||||||||||||||||||||||||||| Sbjct: 28303481 tccgacgccatgaagactggttccttctacggttaga 28303445 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 56 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 115 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599 Query: 116 ttcc 119 |||| Sbjct: 28307598 ttcc 28307595 Score = 54.0 bits (27), Expect = 7e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 541 cccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagc 600 |||||||||| || |||||||||||| ||| ||||||||||| || || |||||| Sbjct: 28307266 cccgtgccggcgggatgcaccgaccaacgcgccgccaactacgaccctaccgccaggagc 28307207 Query: 601 gacgacggcagctgc 615 ||||||||||||||| Sbjct: 28307206 gacgacggcagctgc 28307192 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 191 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 28303727 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 257 gagaacattggcaagaggctggtgaactc 285 |||||||| |||| ||||||||||||||| Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 170 bits (86), Expect = 4e-39 Identities = 158/182 (86%) Strand = Plus / Minus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || ||||||||| Sbjct: 28286457 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 28286398 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct: 28286397 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 28286338 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||| Sbjct: 28286337 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 28286278 Query: 182 at 183 || Sbjct: 28286277 at 28286276 Score = 133 bits (67), Expect = 9e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 28284844 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 28284785 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 ||||||||||||||||||||||||||||||||||| Sbjct: 28284784 gcgacgacggcagctgcctttacaccttttaagca 28284750 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 257 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 316 |||||||||||||||||||||||||||||| |||| || || | ||||||||||| Sbjct: 28286110 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28286051 Query: 317 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 376 |||||||| |||| ||||| | |||||||| ||||||| || |||||||||| || Sbjct: 28286050 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28285991 Query: 377 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 436 ||||||||||||||||| ||||| ||| ||||| |||| ||||| ||||| |||||| Sbjct: 28285990 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28285931 Query: 437 caggatgcgatgaagactggttccttctacggttaga 473 || || |||||||||||||||||||||||||||| Sbjct: 28285930 tccgacgccatgaagactggttccttctacggttaga 28285894 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 56 atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 115 ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| ||| Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28290048 Query: 116 ttcc 119 |||| Sbjct: 28290047 ttcc 28290044 Score = 54.0 bits (27), Expect = 7e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 541 cccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagc 600 |||||||||| || |||||||||||| ||| ||||||||||| || || |||||| Sbjct: 28289715 cccgtgccggcgggatgcaccgaccaacgcgccgccaactacgaccctaccgccaggagc 28289656 Query: 601 gacgacggcagctgc 615 ||||||||||||||| Sbjct: 28289655 gacgacggcagctgc 28289641 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 191 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 240 ||||| ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 28286176 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28286127 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 257 gagaacattggcaagaggctggtgaactc 285 |||||||| |||| ||||||||||||||| Sbjct: 28289940 gagaacatcggcaggaggctggtgaactc 28289912
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1024 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1083 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1084 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1024 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1083 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1084 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1053 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1112 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1113 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 935 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 994 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 995 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 850 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 909 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 910 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 960
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 14264 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 14205 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 14204 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 14154
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 938 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 997 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 998 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 927 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 986 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 987 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1037
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 935 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 994 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 995 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 938 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 997 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 998 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1053 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 1112 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 1113 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 3019 ggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggagaagttc 3078 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 3079 tactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 3129
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||| ||||| || | |||||||| || ||||||||||||||||||||| Sbjct: 968 gtcactggtaacgacttctccaccttgtacgctccccttatccgtgatggtcgtatggag 1027 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 1028 aagttctactgggctcccacccgtgaggaccgtatcggtgttgccaccggtatcttcagg 1087 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 ||||||||||| ||| || || |||||| |||||||||||||||| || ||||| Sbjct: 1088 accgacaatgttcctgaggaccacgttgtcaagctcgtcgacaccttccctggccaatct 1147 Query: 182 attgactttttcggtgc 198 ||||| || |||||||| Sbjct: 1148 attgatttcttcggtgc 1164
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 145 bits (73), Expect = 2e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| || |||||||| || || |||||||| |||||||||||| Sbjct: 838 gtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatggag 897 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||| | || ||||| |||| ||||||| ||||||||| | Sbjct: 898 aagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttcagg 957 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 ||||||| ||| | ||| |||| ||||| |||||||||||||||| || |||||| Sbjct: 958 tccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaatcc 1017 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 238 |||||||| |||||||| ||| | || |||| |||||||| |||||| | |||||| Sbjct: 1018 attgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 1074 Score = 103 bits (52), Expect = 8e-19 Identities = 166/204 (81%) Strand = Plus / Plus Query: 269 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 328 ||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| | Sbjct: 1105 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1164 Query: 329 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 388 || |||||||| |||||||| | ||||| || ||||| ||||| || || ||| | ||| Sbjct: 1165 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1224 Query: 389 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 448 ||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1225 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1284 Query: 449 aagactggttccttctacggttag 472 |||||||| |||||||| |||||| Sbjct: 1285 aagactggatccttctatggttag 1308 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 550 gaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgacggc 609 |||||||| ||||||| ||||||| |||| |||||| ||||| ||||||||||| ||| Sbjct: 1377 gaaggttgtaccgaccggaatgccaccaacttcgacccgacggccaggagcgacgatggc 1436 Query: 610 agctgcctttacac 623 |||||||| ||||| Sbjct: 1437 agctgcctgtacac 1450
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 145 bits (73), Expect = 2e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| || |||||||| || || |||||||| |||||||||||| Sbjct: 701 gtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatggag 760 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||| | || ||||| |||| ||||||| ||||||||| | Sbjct: 761 aagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttcagg 820 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 ||||||| ||| | ||| |||| ||||| |||||||||||||||| || |||||| Sbjct: 821 tccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaatcc 880 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 238 |||||||| |||||||| ||| | || |||| |||||||| |||||| | |||||| Sbjct: 881 attgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 937 Score = 97.6 bits (49), Expect = 5e-17 Identities = 160/197 (81%) Strand = Plus / Plus Query: 269 aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 328 ||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| | Sbjct: 968 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1027 Query: 329 gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 388 || |||||||| |||||||| | ||||| || ||||| ||||| || || ||| | ||| Sbjct: 1028 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1087 Query: 389 cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 448 ||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1088 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1147 Query: 449 aagactggttccttcta 465 |||||||| |||||||| Sbjct: 1148 aagactggatccttcta 1164 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 550 gaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgacggc 609 |||||||| ||||||| ||||||| |||| |||||| ||||| ||||||||||| ||| Sbjct: 1202 gaaggttgtaccgaccggaatgccaccaacttcgacccgacggccaggagcgacgatggc 1261 Query: 610 agctgcctttacac 623 |||||||| ||||| Sbjct: 1262 agctgcctgtacac 1275
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 145 bits (73), Expect = 2e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| || |||||||| || || |||||||| |||||||||||| Sbjct: 537 gtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatggag 596 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||| | || ||||| |||| ||||||| ||||||||| | Sbjct: 597 aagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttcagg 656 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 ||||||| ||| | ||| |||| ||||| |||||||||||||||| || |||||| Sbjct: 657 tccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaatcc 716 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 238 |||||||| |||||||| ||| | || |||| |||||||| |||||| | |||||| Sbjct: 717 attgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 773 Score = 125 bits (63), Expect = 2e-25 Identities = 171/207 (82%) Strand = Plus / Plus Query: 266 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 325 |||||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| Sbjct: 801 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 860 Query: 326 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 385 | || |||||||| |||||||| ||||||| || ||||||||||| || || ||| | Sbjct: 861 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 920 Query: 386 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 445 |||||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||| Sbjct: 921 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 980 Query: 446 atgaagactggttccttctacggttag 472 || |||||||| |||||||| |||||| Sbjct: 981 atcaagactggatccttctatggttag 1007 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 550 gaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgacggc 609 |||||||| ||||||| ||||||| |||| |||||| ||||| ||||||||||| ||| Sbjct: 1076 gaaggttgtaccgaccggaatgccaccaacttcgacccgacggccaggagcgacgatggc 1135 Query: 610 agctgcctttacac 623 |||||||| ||||| Sbjct: 1136 agctgcctgtacac 1149
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 145 bits (73), Expect = 2e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| || |||||||| || || |||||||| |||||||||||| Sbjct: 731 gtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatggag 790 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||||||||||||||||||| | || ||||| |||| ||||||| ||||||||| | Sbjct: 791 aagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttcagg 850 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 ||||||| ||| | ||| |||| ||||| |||||||||||||||| || |||||| Sbjct: 851 tccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaatcc 910 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 238 |||||||| |||||||| ||| | || |||| |||||||| |||||| | |||||| Sbjct: 911 attgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 967 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 266 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 325 |||||||||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| Sbjct: 995 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 1054 Query: 326 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 385 | || |||||||| |||||||| ||||||| || ||||||||||| || || ||| | Sbjct: 1055 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 1114 Query: 386 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 445 |||||||| || |||| ||| ||||| |||||||||| ||||| || || ||||| ||| Sbjct: 1115 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 1174 Query: 446 atgaagactggttccttcta 465 || |||||||| |||||||| Sbjct: 1175 atcaagactggatccttcta 1194 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 550 gaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaaggagcgacgacggc 609 |||||||| ||||||| ||||||| |||| |||||| ||||| ||||||||||| ||| Sbjct: 1232 gaaggttgtaccgaccggaatgccaccaacttcgacccgacggccaggagcgacgatggc 1291 Query: 610 agctgcctttacac 623 |||||||| ||||| Sbjct: 1292 agctgcctgtacac 1305
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 131 bits (66), Expect = 4e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || | |||||||| || ||||||||||||||||||||||||||| Sbjct: 2716 ggtaacgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttc 2775 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctg 105 |||||||||||||||||||| |||||||| |||||||| Sbjct: 2776 tactgggctcccacccgtgaggaccgtattggtgtctg 2813
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 131 bits (66), Expect = 4e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || | |||||||| || ||||||||||||||||||||||||||| Sbjct: 1088 ggtaacgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttc 1147 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctg 105 |||||||||||||||||||| |||||||| |||||||| Sbjct: 1148 tactgggctcccacccgtgaggaccgtattggtgtctg 1185 Score = 44.1 bits (22), Expect = 0.63 Identities = 58/70 (82%) Strand = Plus / Plus Query: 156 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 215 |||| ||| ||||||| |||||||| || ||||||||||| || || | ||||| || | Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcggagcgttgagggctcgtgtat 1295 Query: 216 acgacgatga 225 |||||||||| Sbjct: 1296 acgacgatga 1305
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||| |||||||| | ||||||||||| |||||||||||||||||||| Sbjct: 913 gtcactggtaacgacttctcgacattgtacgctcctcttatccgtgatggtcgtatggaa 972 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 || |||||||||||||| ||| | || |||||||| ||||||||||||||||| ||| | Sbjct: 973 aaattctactgggctcctaccagggaagaccgtattggtgtctgcaagggtattttcagg 1032 Query: 122 accgacaatgt 132 || |||||||| Sbjct: 1033 actgacaatgt 1043 Score = 44.1 bits (22), Expect = 0.63 Identities = 43/50 (86%) Strand = Plus / Plus Query: 395 gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgc 444 ||||||| |||||||| |||| || || |||||||||||||||||||| Sbjct: 1306 gctgacaagtacatgagtgaggctgcccttggtgatgctaaccaggatgc 1355
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 125 bits (63), Expect = 2e-25 Identities = 186/227 (81%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||||||||| || || ||||| || || || |||||| Sbjct: 457 gtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatggag 516 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||||| Sbjct: 517 aagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatcttccgc 576 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||| ||| || ||| |||||| || | |||||||||||||| || || ||| Sbjct: 577 accgacggcgtcgacgaggagcacgtcgtccagctggtcgacaccttccctggccagtcc 636 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 228 || ||||| ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 637 atcgacttcttcggcgcgctgcgtgcccgggtctacgacgacgaggt 683 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 305 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 364 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 760 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 819 Query: 365 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 424 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 820 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 879 Query: 425 ggtgatgctaaccaggatgcgatgaagactggttccttct 464 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 880 ggtgaagccaacgaggacgccatgaagactggctccttct 919
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 123 bits (62), Expect = 9e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||||||||||||||| || | ||||||||||| |||||||| |||||||||||| Sbjct: 929 gtcaccggtaacgatttctcaacattgtacgctcctctcatccgtgacggtcgtatggag 988 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgca 107 ||||||||||||||||||||||| || || ||||| || ||||||| Sbjct: 989 aagttctactgggctcccacccgcgaagatcgtattggagtctgca 1034 Score = 56.0 bits (28), Expect = 2e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 305 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 364 ||||||||||| |||||||| |||| ||||| || |||||||| ||||||| ||||| Sbjct: 1232 ttcgagcagccgaagatgactatcgaaaagctcctcgagtacggaaacatgcttgtccaa 1291 Query: 365 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 424 ||||| || ||||| ||| | || || | ||||| | ||| ||||| |||| ||||| Sbjct: 1292 gagcaagagaatgtgaagagagttcaattggctgataagtacttgagcgaggctgctctt 1351 Query: 425 ggtgatgctaac 436 |||||||||||| Sbjct: 1352 ggtgatgctaac 1363 Score = 44.1 bits (22), Expect = 0.63 Identities = 64/78 (82%) Strand = Plus / Plus Query: 161 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 220 |||||||||||||| ||||| ||||| || || ||||| || | ||| |||| |||||| Sbjct: 1088 gacaccttcccaggccaatctattgatttctttggtgccttgagggctagggtttacgac 1147 Query: 221 gatgaggtgcgcaagtgg 238 ||||| ||| | |||||| Sbjct: 1148 gatgaagtgaggaagtgg 1165
>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small isoform precursor, mRNA, partial cds; nuclear gene for chloroplast product Length = 93 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 5 tgcctgtgccggaaggttgcaccgaccctgttgccaagaacttcgacccaacggcgagga 64 Query: 599 gcgacgacggcagctgcctttacaccttt 627 ||||||||||||||||||||||||||||| Sbjct: 65 gcgacgacggcagctgcctttacaccttt 93
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 117 bits (59), Expect = 5e-23 Identities = 185/227 (81%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||||||||| || || ||||| || || || |||||| Sbjct: 852 gtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatggag 911 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||||| Sbjct: 912 aagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatcttccgc 971 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||| ||| || ||| |||||| || | |||||||||||||| || || ||| Sbjct: 972 accgacggcgtcgacgaggagcacgtcgtccagctggtcgacaccttccctggccagtcc 1031 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 228 || || || ||||| || |||||||| ||||| |||||||| ||||| Sbjct: 1032 atcgatttcttcggcgcgctgcgtgcccgggtctacgacgacgaggt 1078 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 305 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 364 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214 Query: 365 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 424 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274 Query: 425 ggtgatgctaaccaggatgcgatgaagactggttccttct 464 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 109 bits (55), Expect = 1e-20 Identities = 112/131 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||||||||||||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 913 gtcaccggtaacgatttctcgacgctgtacgcgccgctcatccgtgacggtcgtatggag 972 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 ||||| |||||||| |||||| | || || | |||||||| |||| ||||| ||| | Sbjct: 973 aagttttactgggcacccaccagggaagataggatcggtgtttgcacaggtattttcagg 1032 Query: 122 accgacaatgt 132 ||||||||||| Sbjct: 1033 accgacaatgt 1043 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 161 gacaccttcccaggacaatccattgactttttcggtgctctg 202 ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgctctg 1113
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 107 bits (54), Expect = 5e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||||||||| |||||||| || || || |||||||| ||||||||||||||||||||| Sbjct: 351 gtcaccggtaatgatttctcaacactttatgctcctctcatccgtgatggtcgtatggag 410 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgca 107 ||||||||||||||||| || | || || ||||| |||||||||| Sbjct: 411 aagttctactgggctcctactagagaagatcgtattggtgtctgca 456 Score = 48.1 bits (24), Expect = 0.041 Identities = 75/92 (81%) Strand = Plus / Plus Query: 149 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 208 |||||||| || ||||||||||| || |||||||| || || |||||||| || | ||| Sbjct: 498 gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgcattgagggct 557 Query: 209 cgggtgtacgacgatgaggtgcgcaagtgggt 240 | |||||||| ||||| ||| | |||||||| Sbjct: 558 agagtgtacgatgatgaagtgaggaagtgggt 589
>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase activase (Rca) gene, partial sequence Length = 648 Score = 107 bits (54), Expect = 5e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 32 gctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgac 91 |||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 147 gctcctctcatccgtgatggtcgtatggagaaattctactgggcacccactcgtgaggac 206 Query: 92 cgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 133 ||||| ||||| |||| ||||||||| ||| ||||||||| Sbjct: 207 cgtattggtgtttgcactggtatcttcaggactgacaatgtc 248
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 107 bits (54), Expect = 5e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||||||||| || || ||||| || || || |||||| Sbjct: 852 gtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatggag 911 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||||| Sbjct: 912 aagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatcttcc 969 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 305 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 364 ||||||||||| ||||| || |||||||||| | |||||||| |||||||| || | Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214 Query: 365 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 424 |||||||| || ||||||||||||||||||||||||| ||| | | | |||| ||||| Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274 Query: 425 ggtgatgctaaccaggatgcgatgaagactggttccttct 464 ||||| || ||| |||| || ||||||||||| ||||||| Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||||||||| || || || |||||||| ||||||||||||||||||||| Sbjct: 918 gtcactggtaacgatttctcaacactttatgctcctctcatccgtgatggtcgtatggag 977 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||| || || | || ||||| || ||||| |||||||| || |||| | Sbjct: 978 aagttctactgggcaccaacaagggaagaccgcattggtgtttgcaagggaattttccgg 1037 Query: 122 accga 126 ||||| Sbjct: 1038 accga 1042
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 103 bits (52), Expect = 8e-19 Identities = 184/228 (80%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 235 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 294 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||| ||||| || || | || || | || ||||| ||||||||||| ||| | Sbjct: 295 aagttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcagg 354 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| || ||| || |||| || ||||| ||||| |||||||| |||||||| Sbjct: 355 accgacaacgtgcctgaggaagctgttgtaaagattgtcgataccttccctggacaatct 414 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 229 |||||||| || ||||||||| | || || || ||||| ||||||||| Sbjct: 415 attgacttctttggtgctctgagggcacgagtatacgatgatgaggtg 462
>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic sequence Length = 234 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||| |||||| ||||||||||| |||||||||||| |||| Sbjct: 41 tgcctgtgccggaaggttgacccgaccctgttgccaagaacttcgacccaacggcgagga 100 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 |||||||||||||||||||||| | |||||||||| Sbjct: 101 gcgacgacggcagctgcctttaaaacttttaagca 135
>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence Length = 253 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||||||||| |||||||| || | || ||||| || ||||||||||||||||||||| Sbjct: 38 gtcaccggtaatgatttctccaccttgtatgctccccttatccgtgatggtcgtatggag 97 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgca 107 || ||||||||||| || ||||| ||||| ||||| |||||||||| Sbjct: 98 aaattctactgggcaccaacccgcgacgatcgtattggtgtctgca 143
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| Sbjct: 412 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 471 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 472 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 473 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| Sbjct: 418 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 477 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 478 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 535
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 473 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 473 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 473 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 473 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| Sbjct: 416 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 475 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 476 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 533
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||||||||| || || || |||||||| |||||||| |||||||||||| Sbjct: 728 gtcactggtaacgatttctccacactgtatgctcctctcatccgtgacggtcgtatggag 787 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 || || |||||||| || || | ||||||||||||||||| ||||| ||||| ||| | Sbjct: 788 aaattttactgggcaccaactagggacgaccgtatcggtgtttgcaaaggtattttcagg 847 Query: 122 accgac 127 |||||| Sbjct: 848 accgac 853 Score = 48.1 bits (24), Expect = 0.041 Identities = 54/64 (84%) Strand = Plus / Plus Query: 156 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 215 |||||||||||||||| || |||||||| || || |||||||| || | |||||||| | Sbjct: 882 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 941 Query: 216 acga 219 |||| Sbjct: 942 acga 945
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 97.6 bits (49), Expect = 5e-17 Identities = 178/221 (80%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || || || || || || ||||| Sbjct: 398 gtcaccggcaacgacttctccacgctgtacgcgccgctcattcgcgacgggcgcatggac 457 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 458 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttccgc 517 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||| ||| |||||| |||||| || |||||||| ||||||| || || ||| Sbjct: 518 accgacggcgtccccgacgagcacgtcgtccagctcgtcgacgccttcccgggccagtcc 577 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacga 222 || ||||| ||||| || || || || |||||||||||||| Sbjct: 578 atcgacttcttcggcgccctccgcgcccgggtgtacgacga 618
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 97.6 bits (49), Expect = 5e-17 Identities = 178/221 (80%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| Sbjct: 406 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 465 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||||| Sbjct: 466 aagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaagggcatcttccgc 525 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||| ||| |||||| |||||| || |||||||| ||||||| || || ||| Sbjct: 526 accgacggcgtccccgacgagcacgtcgtccagctcgtcgacgccttcccgggccagtcc 585 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacga 222 || ||||| ||||| || || || || |||||||||||||| Sbjct: 586 atcgacttcttcggcgccctccgcgcccgggtgtacgacga 626
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| ||||| || |||||||| | ||||||||||| || |||||||||||||||||| Sbjct: 756 gtcacaggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggag 815 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 || ||||||||||| |||||| | || ||||| || |||||||||| ||||||||| Sbjct: 816 aaattctactgggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 872
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| ||||| || |||||||| | ||||||||||| || |||||||||||||||||| Sbjct: 929 gtcacaggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggag 988 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 118 || ||||||||||| |||||| | || ||||| || |||||||||| ||||||||| Sbjct: 989 aaattctactgggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 1045
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||||||||| || || || |||||||| |||||||| |||||||||||| Sbjct: 727 gtcactggtaacgatttctccacactgtatgctcctctcatccgtgacggtcgtatggag 786 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 || || |||||||| || || | ||||||||| ||||||| ||||| ||||| ||| | Sbjct: 787 aaattttactgggcaccaactagggacgaccgtgtcggtgtttgcaaaggtattttcagg 846 Query: 122 accgac 127 |||||| Sbjct: 847 accgac 852 Score = 48.1 bits (24), Expect = 0.041 Identities = 54/64 (84%) Strand = Plus / Plus Query: 156 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 215 |||||||||||||||| || |||||||| || || |||||||| || | |||||||| | Sbjct: 881 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 940 Query: 216 acga 219 |||| Sbjct: 941 acga 944
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| Sbjct: 416 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 475 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 476 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 533
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 473 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| Sbjct: 412 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 471 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 472 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| Sbjct: 412 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 471 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 472 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 473 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| Sbjct: 418 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 477 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 119 |||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 478 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 535
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||||||||| |||||||| ||||| || |||||||| || |||||||| ||||||||| Sbjct: 922 gtcaccggtaatgatttctcaacgctgtatgctcctctcattcgtgatgggcgtatggag 981 Query: 62 aagttctactgggc 75 |||||||||||||| Sbjct: 982 aagttctactgggc 995
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 87.7 bits (44), Expect = 5e-14 Identities = 182/228 (79%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 879 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 938 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||||| ||||| || || | || || | || ||||| ||||||||||| ||| | Sbjct: 939 aagttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcagg 998 Query: 122 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 181 |||||||| || ||| || | || | ||||| ||||| |||||||| |||||||| Sbjct: 999 accgacaacgtgcctgaggaagccgttataaagattgtcgataccttccctggacaatct 1058 Query: 182 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 229 |||||||| || ||||||||| | || || || ||||| ||||||||| Sbjct: 1059 attgacttctttggtgctctgagggcacgagtatacgatgatgaggtg 1106
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||| ||||| || | || || ||||| ||||||||||| ||||||||| Sbjct: 913 gtcactggtaacgacttctcaacattgtatgcccctcttatccgtgatggccgtatggag 972 Query: 62 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaa 108 || ||||||||||| |||||| | || |||||||| ||||||||||| Sbjct: 973 aaattctactgggcacccaccagggaggaccgtattggtgtctgcaa 1019 Score = 40.1 bits (20), Expect = 9.9 Identities = 68/84 (80%) Strand = Plus / Plus Query: 352 catgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgag 411 |||||| |||||||||||||| || |||||| | || || | ||||||| |||||| Sbjct: 1263 catgcttgtccaggagcaggagaacgtcaagagagttcaattagctgacaaatacatgtc 1322 Query: 412 ccaggcagctctgggtgatgctaa 435 | |||| ||||| ||||||||||| Sbjct: 1323 cgaggctgctcttggtgatgctaa 1346
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||||||||| || | || ||||| || ||||||||||||||||||||| Sbjct: 149 gtcactggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatggag 208 Query: 62 aagttctactgggc 75 |||||||||||||| Sbjct: 209 aagttctactgggc 222 Score = 44.1 bits (22), Expect = 0.63 Identities = 43/50 (86%) Strand = Plus / Plus Query: 149 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 198 |||||||| || || | |||||| |||||||| || |||||||||||||| Sbjct: 296 gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 83.8 bits (42), Expect = 7e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || || ||||| || || |||||||| || || |||||||||| | Sbjct: 1748 ggtaacgatttctccaccctgtacgcccccctcatccgtgacggccgcatggagaagtac 1807 Query: 68 tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 121 |||||| ||||||||||| ||||| ||||| ||||||| ||| ||||||||| Sbjct: 1808 tactggaaccccacccgtgaggaccgcatcggcgtctgcatgggaatcttccag 1861 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 365 gagcaggacaatgtcaagcgtgtgcagct 393 |||||||| ||||||||||| |||||||| Sbjct: 2105 gagcaggagaatgtcaagcgcgtgcagct 2133
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||| ||||| || | || |||||||| ||||||||||||||||||||| Sbjct: 890 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 949 Query: 62 aagttctactgggc 75 |||||||||||||| Sbjct: 950 aagttctactgggc 963
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||||||||| || | || ||||| || ||||||||||||||||||||| Sbjct: 909 gtcactggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatggag 968 Query: 62 aagttctactgggc 75 |||||||||||||| Sbjct: 969 aagttctactgggc 982
>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase Length = 2472 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 332 aagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcag 391 |||||||||||||| || ||||||| |||||||||||||||||||| ||| | || || Sbjct: 3 aagctgctagagtatggaaacatgcttgtccaggagcaggacaatgtgaagagagttcaa 62 Query: 392 cttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgat 447 || || ||||| ||| ||||||| |||||||| || ||||| ||| ||||| |||| Sbjct: 63 ctggcagacacgtacttgagccaagcagctcttggagatgcaaacgaggattcgat 118
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 77.8 bits (39), Expect = 5e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| |||||| |||| ||||||||||| | || Sbjct: 4541319 tgcctgtgccggaaggttgcaccgaccctgttgccaacaactttgacccaacggcgatga 4541378 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 || ||||| ||| ||||||||||||||| |||||| Sbjct: 4541379 gcaacgacagcatctgcctttacaccttctaagca 4541413
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0638A12 Length = 140731 Score = 77.8 bits (39), Expect = 5e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 539 tgcccgtgccggaaggttgcaccgaccaaaatgccaagaactacgacccaacggcaagga 598 |||| |||||||||||||||||||||| |||||| |||| ||||||||||| | || Sbjct: 84693 tgcctgtgccggaaggttgcaccgaccctgttgccaacaactttgacccaacggcgatga 84752 Query: 599 gcgacgacggcagctgcctttacaccttttaagca 633 || ||||| ||| ||||||||||||||| |||||| Sbjct: 84753 gcaacgacagcatctgcctttacaccttctaagca 84787
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| |||||||||||||| || | || || ||||| ||||||||||||||||||||| Sbjct: 926 gtcactggtaacgatttctccacattgtatgcacctcttatccgtgatggtcgtatggag 985 Query: 62 aagttctactgggc 75 || ||||||||||| Sbjct: 986 aaattctactgggc 999 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 149 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 202 |||||||||||||| | |||||| |||||||| ||||| || |||||||||||| Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgctctg 1126
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/100 (85%), Gaps = 4/100 (4%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||||||||| || | |||| |||||| |||| |||||| ||||||||||||||| Sbjct: 919 ggtaacgatttctccaccttatacggtcctctcatccttgatggacgtatggagaagttc 978 Query: 68 t--actgggctcccacccgtgacgaccgtatcggtgtctg 105 | ||||| || |||||||| ||||||||||||||||| Sbjct: 979 ttgactgg--cccgacccgtgaagaccgtatcggtgtctg 1016
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| || ||||||||||| | || || ||||| || ||||| |||||||||||||| Sbjct: 343 gtcacaggaaacgatttctcagcactatatgctccccttatccgcgatggtcgtatggaa 402 Query: 62 aagttctactgggctcc 78 ||||||||||||||||| Sbjct: 403 aagttctactgggctcc 419
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 161 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 220 ||||||||||| || || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 2721 Query: 221 ga 222 || Sbjct: 2722 ga 2723
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 161 gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 220 ||||||||||| || || ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 972 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 1031 Query: 221 ga 222 || Sbjct: 1032 ga 1033
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 8 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 67 |||||||| ||||| ||| | || || ||||| || ||||||||||| ||||| || ||| Sbjct: 930 ggtaacgacttctcaacgttatatgcacctctcattcgtgatggtcggatggataaattc 989 Query: 68 tactgggctcccacccgtgacgaccgtat 96 ||||||||||| || ||||| || ||||| Sbjct: 990 tactgggctccaactcgtgaagatcgtat 1018 Score = 52.0 bits (26), Expect = 0.003 Identities = 68/82 (82%) Strand = Plus / Plus Query: 158 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 217 |||||||||||||||||||| || || ||||| || |||||| || | ||||| || || Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctttgagagctcgagtttat 1139 Query: 218 gacgatgaggtgcgcaagtggg 239 |||||||| ||| | ||||||| Sbjct: 1140 gacgatgaagtgagaaagtggg 1161
>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 62 aagttctactgg 73 |||||||||||| Sbjct: 959 aagttctactgg 970
>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1299 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924 Query: 62 aagttctactgg 73 |||||||||||| Sbjct: 925 aagttctactgg 936
>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958 Query: 62 aagttctactgg 73 |||||||||||| Sbjct: 959 aagttctactgg 970
>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932 Query: 62 aagttctactgg 73 |||||||||||| Sbjct: 933 aagttctactgg 944
>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete cds, clone: RAFL21-28-D21 Length = 1447 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945 Query: 62 aagttctactgg 73 |||||||||||| Sbjct: 946 aagttctactgg 957
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 2 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 61 ||||| || ||||||||||| || || || ||||| ||||||||||| || | |||||| Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627 Query: 62 aagttctactgg 73 |||||||||||| Sbjct: 97626 aagttctactgg 97615
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 39 tgatccgtgatggtcgtatggagaagttctactgg 73 |||| |||||||| ||||||||||||||||||||| Sbjct: 644 tgattcgtgatgggcgtatggagaagttctactgg 678
>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 11 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 70 ||||||||||| || || || ||||| ||||||||||| || | ||||||||||||||| Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995 Query: 71 tgg 73 ||| Sbjct: 996 tgg 998
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 48.1 bits (24), Expect = 0.041 Identities = 39/44 (88%) Strand = Plus / Minus Query: 32 gctcctctgatccgtgatggtcgtatggagaagttctactgggc 75 |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 103868 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 103825
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 48.1 bits (24), Expect = 0.041 Identities = 39/44 (88%) Strand = Plus / Minus Query: 32 gctcctctgatccgtgatggtcgtatggagaagttctactgggc 75 |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 82893 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 82850
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 44 cgtgatggtcgtatggagaagttctactgggctcccacccgtgacga 90 |||||||| |||||||| || ||||||||||| || || |||||||| Sbjct: 6938 cgtgatggacgtatggaaaaattctactgggcacctactcgtgacga 6892
>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence Length = 119249 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 410 agccaggcagctctgggtgatg 431 |||||||||||||||||||||| Sbjct: 51254 agccaggcagctctgggtgatg 51275
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 caagatcgtcgacaccttccc 171 ||||||||||||||||||||| Sbjct: 3673 caagatcgtcgacaccttccc 3653
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 637 cacttttaatatctgatgttt 657 ||||||||||||||||||||| Sbjct: 3040420 cacttttaatatctgatgttt 3040440
>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 593 Score = 42.1 bits (21), Expect = 2.5 Identities = 61/73 (83%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 2 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 60 ||||| || ||||||||||| || || || |||| | ||||||||||| || | ||||| Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195 Query: 61 gaagttctactgg 73 ||||||||||||| Sbjct: 196 gaagttctactgg 208
>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence Length = 75381 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 489 acccaccatctcttgctgcat 509 ||||||||||||||||||||| Sbjct: 63550 acccaccatctcttgctgcat 63530
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 637 cacttttaatatctgatgttt 657 ||||||||||||||||||||| Sbjct: 3040365 cacttttaatatctgatgttt 3040385
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159711 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 637 cacttttaatatctgatgttt 657 ||||||||||||||||||||| Sbjct: 114423 cacttttaatatctgatgttt 114403
>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence Length = 98713 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ggtgtctgcaagggtatcttccag 121 |||||||||||||||||| ||||| Sbjct: 67265 ggtgtctgcaagggtatcatccag 67288
>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel alpha subunit mRNA, partial cds Length = 3448 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 tgagccaggcagctctgggtgatg 431 ||||||||||||||||||| |||| Sbjct: 1565 tgagccaggcagctctgggcgatg 1542
>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA Length = 531 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 agcgtgtgcagcttgctgac 400 |||||||||||||||||||| Sbjct: 223 agcgtgtgcagcttgctgac 242
>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B Length = 1010 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 agtgacgagtctgtcgtcaa 153 |||||||||||||||||||| Sbjct: 308 agtgacgagtctgtcgtcaa 289
>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence Length = 177402 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 633 atgccacttttaatatctga 652 |||||||||||||||||||| Sbjct: 141077 atgccacttttaatatctga 141058
>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence Length = 163782 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 633 atgccacttttaatatctga 652 |||||||||||||||||||| Sbjct: 142583 atgccacttttaatatctga 142564
>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence Length = 204813 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 633 atgccacttttaatatctga 652 |||||||||||||||||||| Sbjct: 95911 atgccacttttaatatctga 95930
>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA, complete cds Length = 3459 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 tgagccaggcagctctgggtgatg 431 ||||||||||||||||||| |||| Sbjct: 1619 tgagccaggcagctctgggcgatg 1596
>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence Length = 161308 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 caggagcaggacaatgtcaa 381 |||||||||||||||||||| Sbjct: 126419 caggagcaggacaatgtcaa 126438
>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (KCNMA1), mRNA Length = 6183 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 tgagccaggcagctctgggtgatg 431 ||||||||||||||||||| |||| Sbjct: 1935 tgagccaggcagctctgggcgatg 1912
>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, section 128 of 469 of the complete genome Length = 11388 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 597 gagcgacgacggcagctgcctttacacc 624 |||||||||||||||| |||| |||||| Sbjct: 5133 gagcgacgacggcagcagcctgtacacc 5160
>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds, alternatively spliced Length = 3430 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 tgagccaggcagctctgggtgatg 431 ||||||||||||||||||| |||| Sbjct: 1659 tgagccaggcagctctgggcgatg 1636
>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds, alternatively spliced Length = 4490 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 tgagccaggcagctctgggtgatg 431 ||||||||||||||||||| |||| Sbjct: 2026 tgagccaggcagctctgggcgatg 2003
>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds, alternatively spliced Length = 6183 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 tgagccaggcagctctgggtgatg 431 ||||||||||||||||||| |||| Sbjct: 1935 tgagccaggcagctctgggcgatg 1912
>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15, complete sequence Length = 134752 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 tacaccttttaagcatgcca 638 |||||||||||||||||||| Sbjct: 78254 tacaccttttaagcatgcca 78235
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgtgacgaccgtatcggtgt 102 |||||||||||||||||||| Sbjct: 3056327 cgtgacgaccgtatcggtgt 3056308
>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence Length = 125424 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 caggagcaggacaatgtcaa 381 |||||||||||||||||||| Sbjct: 106979 caggagcaggacaatgtcaa 106960
>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit (KCNMA1), mRNA Length = 3459 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 tgagccaggcagctctgggtgatg 431 ||||||||||||||||||| |||| Sbjct: 1619 tgagccaggcagctctgggcgatg 1596
>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete sequence Length = 230848 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 630 agcatgccacttttaatatctgat 653 |||||| ||||||||||||||||| Sbjct: 127852 agcatggcacttttaatatctgat 127875 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,814,442 Number of Sequences: 3902068 Number of extensions: 4814442 Number of successful extensions: 84906 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84405 Number of HSP's gapped (non-prelim): 431 length of query: 723 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 700 effective length of database: 17,143,297,704 effective search space: 12000308392800 effective search space used: 12000308392800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
