ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baak4b16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 12 ggcggacggcgtggcggtggaggaggc 38 |||||||||||||| |||||||||||| Sbjct: 24778 ggcggacggcgtggaggtggaggaggc 24752
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 12 ggcggacggcgtggcggtggaggaggc 38 |||||||||||||| |||||||||||| Sbjct: 26379 ggcggacggcgtggaggtggaggaggc 26353
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 12 ggcggacggcgtggcggtggaggaggc 38 |||||||||||||| |||||||||||| Sbjct: 26379 ggcggacggcgtggaggtggaggaggc 26353
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 12 ggcggacggcgtggcggtggaggaggc 38 |||||||||||||| |||||||||||| Sbjct: 24778 ggcggacggcgtggaggtggaggaggc 24752
>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147503 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 12 ggcggacggcgtggcggtggaggaggc 38 |||||||||||||| |||||||||||| Sbjct: 26379 ggcggacggcgtggaggtggaggaggc 26353
>emb|BX000503.2|CNS08CDT Oryza sativa chromosome 12, . BAC OSJNBb0077A02 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131346 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 12 ggcggacggcgtggcggtggaggaggc 38 |||||||||||||| |||||||||||| Sbjct: 24778 ggcggacggcgtggaggtggaggaggc 24752
>emb|AL360157.12| Human DNA sequence from clone RP11-801I18 on chromosome 6q14.2-16.1 Contains part of a novel gene, complete sequence Length = 197431 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 327 gttctatttccatttccattct 348 |||||||||||||||||||||| Sbjct: 5819 gttctatttccatttccattct 5798 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 ttctatttccatttccattct 298 ||||||||||||||||||||| Sbjct: 5818 ttctatttccatttccattct 5798
>emb|AL355294.14| Human DNA sequence from clone RP11-379B8 on chromosome 6 Contains part of a novel gene, complete sequence Length = 101016 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 327 gttctatttccatttccattct 348 |||||||||||||||||||||| Sbjct: 85292 gttctatttccatttccattct 85271 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 ttctatttccatttccattct 298 ||||||||||||||||||||| Sbjct: 85291 ttctatttccatttccattct 85271
>gb|AC160126.2| Mus musculus BAC clone RP23-295C1 from chromosome 13, complete sequence Length = 212570 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 ctattgttaatccgtgttctatttc 336 ||||||||||||||| ||||||||| Sbjct: 83025 ctattgttaatccgtcttctatttc 83049
>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence Length = 218519 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 ttttctatttccatttccatt 296 ||||||||||||||||||||| Sbjct: 101280 ttttctatttccatttccatt 101260
>ref|XM_504874.1| Yarrowia lipolytica CLIB122, YALI0F01738g predicted mRNA Length = 2613 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gacggcgtggcggtggaggag 36 ||||||||||||||||||||| Sbjct: 92 gacggcgtggcggtggaggag 72
>dbj|AB228886.1| Aspergillus oryzae cDNA, contig sequence: AoEST5760 Length = 367 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 acggcgtggcggtggaggagg 37 ||||||||||||||||||||| Sbjct: 302 acggcgtggcggtggaggagg 322
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 acggcgtggcggtggaggagg 37 ||||||||||||||||||||| Sbjct: 1686542 acggcgtggcggtggaggagg 1686562
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 369 tatatagtagggagtatatgttgaa 393 ||||||||| ||||||||||||||| Sbjct: 21933589 tatatagtacggagtatatgttgaa 21933565
>dbj|AB017563.2| Homo sapiens IGSF4 gene, complete cds Length = 12595 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 aaataaccttttccaaaggaaactt 416 |||||||||| |||||||||||||| Sbjct: 2804 aaataaccttgtccaaaggaaactt 2780
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 369 tatatagtagggagtatatgttgaa 393 ||||||||| ||||||||||||||| Sbjct: 156074 tatatagtacggagtatatgttgaa 156050
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 cgtggcggtggaggaggcgca 41 ||||||||||||||||||||| Sbjct: 1347450 cgtggcggtggaggaggcgca 1347430
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 tggaggaggcgcaccgccgcg 49 ||||||||||||||||||||| Sbjct: 4609402 tggaggaggcgcaccgccgcg 4609382
>emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chromosome 13, complete sequence Length = 231247 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 ctattgttaatccgtgttctatttc 336 ||||||||||||||| ||||||||| Sbjct: 137599 ctattgttaatccgtcttctatttc 137623
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gacggcgtggcggtggaggag 36 ||||||||||||||||||||| Sbjct: 272783 gacggcgtggcggtggaggag 272763
>dbj|AP005020.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-486A21, complete sequences Length = 57000 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 aaataaccttttccaaaggaaactt 416 |||||||||| |||||||||||||| Sbjct: 13987 aaataaccttgtccaaaggaaactt 14011
>ref|NM_190713.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 gcgcaccgccgcgtcctcgg 56 |||||||||||||||||||| Sbjct: 630 gcgcaccgccgcgtcctcgg 611
>gb|AC009739.4| Drosophila melanogaster clone BACR26B18, complete sequence Length = 173641 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 162999 tttctatttccatttccatt 163018
>gb|AC113901.7| Rattus norvegicus 2 BAC CH230-328F5 (Children's Hospital Oakland Research Institute) complete sequence Length = 157435 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 152168 tttctatttccatttccatt 152187
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ggcgcaccgccgcgtcctcg 55 |||||||||||||||||||| Sbjct: 2261093 ggcgcaccgccgcgtcctcg 2261112
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 520978 tttctatttccatttccatt 520997
>ref|XM_664838.1| Plasmodium berghei strain ANKA hypothetical protein (PB100789.00.0) partial mRNA Length = 243 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 215 tttctatttccatttccatt 196
>gb|AC158113.7| Mus musculus chromosome 7, clone RP23-227N6, complete sequence Length = 159400 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 tccattttctatttccatttccat 295 ||||||||| |||||||||||||| Sbjct: 28230 tccattttccatttccatttccat 28253
>emb|BX248084.5| Human DNA sequence from clone DASS-5D2 on chromosome 6, complete sequence Length = 66068 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ttctatttccatttccattc 347 |||||||||||||||||||| Sbjct: 40019 ttctatttccatttccattc 40038 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ttctatttccatttccattc 297 |||||||||||||||||||| Sbjct: 40019 ttctatttccatttccattc 40038
>emb|AL935156.4| Human DNA sequence from clone DAQB-153A4 on chromosome 6 Contains the OR2G1P pseudogene for olfactory receptor, family 2, subfamily G, member 1, the OR2H4P pseudogene for olfactory receptor, family 2, subfamily H, member 4, the OR2J4P pseudogene for olfactory receptor, family 2, subfamily J, member 4, the OR2J2 gene for olfactory receptor, family 2, subfamily J, member 2 and 2 CpG islands, complete sequence Length = 95360 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ttctatttccatttccattc 347 |||||||||||||||||||| Sbjct: 92697 ttctatttccatttccattc 92716 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ttctatttccatttccattc 297 |||||||||||||||||||| Sbjct: 92697 ttctatttccatttccattc 92716
>emb|AL645937.6| Human DNA sequence from clone XXbac-171B11 on chromosome 6 contains the OR2J3 and OR2J2 genes for olfactory receptor, family 2, subfamily J, members 2 and 3, the OR2J1P, OR2N1P, OR2J4P, OR2H4P and OR2G1P pseudogenes for olfactory receptor, family 2, subfamily J, members 1 and 4, subfamily G, member 1, subfamily H, member 4 and subfamily N, member 1 and two CpG islands, complete sequence Length = 147667 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ttctatttccatttccattc 347 |||||||||||||||||||| Sbjct: 137114 ttctatttccatttccattc 137133 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ttctatttccatttccattc 297 |||||||||||||||||||| Sbjct: 137114 ttctatttccatttccattc 137133
>emb|AL662857.3| Human DNA sequence from clone XXbac-147D4 on chromosome 6 contains the OR5U1 gene for olfactory receptor, family 5, subfamily U, member 1, the OR2H4P, OR2G1P, OR2U1P, OR2U2P, OR2B4P pseudogenes for olfactory receptor, family 2, subfamily H, member 4, subfamily G, member 1, subfamily U, member 1, subfamily U, member 2, subfamily B, member 4 and a DEAD/H (Asp-Glu-Ala-Asp) box polypeptide 6 (DDX6) (RNA helicase, 54 kD) pseudogene, complete sequence Length = 136687 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ttctatttccatttccattc 347 |||||||||||||||||||| Sbjct: 26233 ttctatttccatttccattc 26252 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ttctatttccatttccattc 297 |||||||||||||||||||| Sbjct: 26233 ttctatttccatttccattc 26252
>gb|AF376834.1| Vespertilio murinus cytochrome b (cytb) gene, complete cds; mitochondrial gene for mitochondrial product Length = 1140 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tccattttctatttccattt 291 |||||||||||||||||||| Sbjct: 542 tccattttctatttccattt 561
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tggaggaggcgcaccgccgc 48 |||||||||||||||||||| Sbjct: 162099 tggaggaggcgcaccgccgc 162080
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ggcgcaccgccgcgtcctcg 55 |||||||||||||||||||| Sbjct: 422465 ggcgcaccgccgcgtcctcg 422484
>emb|AL590607.1|SPCPB1C11 S.pombe chromosome III BAC pB1C11 Length = 13933 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 2120 tttctatttccatttccatt 2139
>emb|CR753509.3| Human DNA sequence from clone DADB-246O10 on chromosome 6, complete sequence Length = 127540 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ttctatttccatttccattc 347 |||||||||||||||||||| Sbjct: 11152 ttctatttccatttccattc 11171 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ttctatttccatttccattc 297 |||||||||||||||||||| Sbjct: 11152 ttctatttccatttccattc 11171
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cggcgtggcggtggaggagg 37 |||||||||||||||||||| Sbjct: 170198 cggcgtggcggtggaggagg 170217
>gb|AC023718.4| Drosophila melanogaster X BAC RP98-7P15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164415 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 136376 tttctatttccatttccatt 136357
>gb|AF243891.1| Xenentodon cancila isolate N26 cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 541 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tccattttctatttccattt 291 |||||||||||||||||||| Sbjct: 419 tccattttctatttccattt 438
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cggcgtggcggtggaggagg 37 |||||||||||||||||||| Sbjct: 4673617 cggcgtggcggtggaggagg 4673598
>gb|AF382877.1|AF382877 Glossophaga leachi specimen-voucher TK20567 cytochrome b gene, complete cds; mitochondrial gene for mitochondrial product Length = 1140 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tccattttctatttccattt 291 |||||||||||||||||||| Sbjct: 542 tccattttctatttccattt 561
>gb|DQ311170.1| Bombyx mori EN protein binding/engrailed nuclear homeoprotein-regulated protein mRNA, complete cds Length = 2207 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 gtggcggtggaggaggcgca 41 |||||||||||||||||||| Sbjct: 1302 gtggcggtggaggaggcgca 1283
>gb|AC159243.2| Mus musculus BAC clone RP24-274F15 from chromosome 12, complete sequence Length = 163575 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gttctatttccatttccatt 346 |||||||||||||||||||| Sbjct: 29079 gttctatttccatttccatt 29060
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ggcgcaccgccgcgtcctcg 55 |||||||||||||||||||| Sbjct: 1565927 ggcgcaccgccgcgtcctcg 1565908
>gb|AC139197.10| Mus musculus chromosome 15, clone RP24-119N11, complete sequence Length = 172693 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 agccttcctgaatggaccagcact 196 |||||||||||||||| ||||||| Sbjct: 146350 agccttcctgaatggatcagcact 146327
>gb|AC172742.2| Medicago truncatula chromosome 7 BAC clone mth2-16i6, complete sequence Length = 112680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 tgttctatttccatttccat 345 |||||||||||||||||||| Sbjct: 25712 tgttctatttccatttccat 25731
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 520976 tttctatttccatttccatt 520995
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 gcgcaccgccgcgtcctcgg 56 |||||||||||||||||||| Sbjct: 37302762 gcgcaccgccgcgtcctcgg 37302781
>gb|AC008258.4|AC008258 Drosophila melanogaster, chromosome 2R, region 43C-43C, BAC clone BACR04G20, complete sequence Length = 184079 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 3788 tttctatttccatttccatt 3807
>emb|BX908738.4| Human DNA sequence from clone DAMA-148L19 on chromosome 6, complete sequence Length = 94877 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ttctatttccatttccattc 347 |||||||||||||||||||| Sbjct: 25334 ttctatttccatttccattc 25353 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ttctatttccatttccattc 297 |||||||||||||||||||| Sbjct: 25334 ttctatttccatttccattc 25353
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ggaggaggcgcaccgccgcg 49 |||||||||||||||||||| Sbjct: 367042 ggaggaggcgcaccgccgcg 367023
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 gcgcaccgccgcgtcctcgg 56 |||||||||||||||||||| Sbjct: 14796 gcgcaccgccgcgtcctcgg 14815
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 gcgcaccgccgcgtcctcgg 56 |||||||||||||||||||| Sbjct: 139751 gcgcaccgccgcgtcctcgg 139770
>emb|AJ224970.1|SSI224970 Spermatozopsis similis mRNA for 90 kD basal apparatus-protein Length = 2767 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ggaggaggcgcaccgccgcg 49 |||||||||||||||||||| Sbjct: 1175 ggaggaggcgcaccgccgcg 1194
>dbj|AK105529.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G08, full insert sequence Length = 1804 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 gcgcaccgccgcgtcctcgg 56 |||||||||||||||||||| Sbjct: 812 gcgcaccgccgcgtcctcgg 793
>gb|AE003841.5| Drosophila melanogaster chromosome 2R, section 9 of 73 of the complete sequence Length = 266427 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 160052 tttctatttccatttccatt 160071
>gb|AE003486.2| Drosophila melanogaster chromosome X, section 38 of 74 of the complete sequence Length = 328128 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 133604 tttctatttccatttccatt 133585
>gb|AC005452.1|AC005452 Drosophila melanogaster, chromosome 2R, region 43B2-43C2, P1 clone DS07185, complete sequence Length = 79333 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 32514 tttctatttccatttccatt 32495
>emb|AL050339.7|HSJ974I11 Human DNA sequence from clone RP5-974I11 on chromosome 6p21.32-22.2 Contains olfactory receptor 2G1, 2U1, 2U2 and 2B4 pseudogenes OR2G1P, OR2U1P, OR2U2P and OR2B4P, STSs and GSSs, complete sequence Length = 68105 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ttctatttccatttccattc 347 |||||||||||||||||||| Sbjct: 11432 ttctatttccatttccattc 11451 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ttctatttccatttccattc 297 |||||||||||||||||||| Sbjct: 11432 ttctatttccatttccattc 11451
>emb|AL845267.2| Mouse DNA sequence from clone RP23-426D2 on chromosome 2, complete sequence Length = 216597 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ctatttccatttccattctg 349 |||||||||||||||||||| Sbjct: 82705 ctatttccatttccattctg 82724 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ctatttccatttccattctg 299 |||||||||||||||||||| Sbjct: 82705 ctatttccatttccattctg 82724
>gb|AF471083.1| Phyllorhynchus decurtatus cytochrome b (cytb) gene, complete cds; mitochondrial Length = 1117 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 gttgtgatttgtaaagtgat 466 |||||||||||||||||||| Sbjct: 116 gttgtgatttgtaaagtgat 97
>dbj|AP006668.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT16B20, TM0367, complete sequence Length = 112717 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ccgtccatccattttctatt 284 |||||||||||||||||||| Sbjct: 33733 ccgtccatccattttctatt 33752
>emb|AL731790.10| Mouse DNA sequence from clone RP23-104P2 on chromosome 2, complete sequence Length = 214765 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 126407 tttctatttccatttccatt 126426
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tttctatttccatttccatt 296 |||||||||||||||||||| Sbjct: 94940 tttctatttccatttccatt 94921
>emb|AL121657.4|CNS01DS7 BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 41M14 of library CITB_978_SKB from chromosome 2 of Homo sapiens (Human) Length = 151949 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 cttttccaaaggaaactttt 418 |||||||||||||||||||| Sbjct: 96695 cttttccaaaggaaactttt 96714 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,341,266 Number of Sequences: 3902068 Number of extensions: 4341266 Number of successful extensions: 113919 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112951 Number of HSP's gapped (non-prelim): 966 length of query: 492 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 470 effective length of database: 17,147,199,772 effective search space: 8059183892840 effective search space used: 8059183892840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
