>PSAG_HORVU (Q00327) Photosystem I reaction center subunit V, chloroplast|
           precursor (PSI-G) (Photosystem I 9 kDa protein)
          Length = 143

 Score =  155 bits (392), Expect = 3e-38
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = +2

Query: 17  PSVVISLSTGLSLVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDP 196
           PSVVISLSTGLSLVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDP
Sbjct: 48  PSVVISLSTGLSLVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDP 107

Query: 197 VGFNLVDVLAWGSIGH 244
           VGFNLVDVLAWGSIGH
Sbjct: 108 VGFNLVDVLAWGSIGH 123

>PSAG_ARATH (Q9S7N7) Photosystem I reaction center subunit V, chloroplast|
           precursor (PSI-G)
          Length = 160

 Score =  138 bits (347), Expect = 4e-33
 Identities = 65/77 (84%), Positives = 73/77 (94%), Gaps = 1/77 (1%)
 Frame = +2

Query: 17  PSVVISLSTGLSLVMGRFVFFNFQRENVAKQ-VPEQNGKTHFEAGDERAKEFAGILKSND 193
           PS+VISLSTGLSL +GRFVFFNFQRENVAKQ +PEQNGKTHFEAGD+RAKE+  +LKSND
Sbjct: 64  PSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLLKSND 123

Query: 194 PVGFNLVDVLAWGSIGH 244
           P+GFN+VDVLAWGSIGH
Sbjct: 124 PIGFNIVDVLAWGSIGH 140

>PSAG_SPIOL (P12357) Photosystem I reaction center subunit V, chloroplast|
           precursor (PSI-G) (Photosystem I 9 kDa protein)
          Length = 167

 Score =  137 bits (345), Expect = 7e-33
 Identities = 64/76 (84%), Positives = 71/76 (93%)
 Frame = +2

Query: 17  PSVVISLSTGLSLVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDP 196
           PS+VISLSTGLSL +GRFVFFNFQREN+AKQVPEQNG +HFEAGD RAKE+  +LKSNDP
Sbjct: 73  PSLVISLSTGLSLFLGRFVFFNFQRENMAKQVPEQNGMSHFEAGDTRAKEYVSLLKSNDP 132

Query: 197 VGFNLVDVLAWGSIGH 244
           VGFN+VDVLAWGSIGH
Sbjct: 133 VGFNIVDVLAWGSIGH 148

>PSAG_TORRU (Q9SPM4) Photosystem I reaction center subunit V, chloroplast|
           precursor (PSI-G)
          Length = 112

 Score = 71.6 bits (174), Expect = 5e-13
 Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = +2

Query: 20  SVVISLSTGLSLVMGRFVFFNFQRENVAKQ-VPEQNGKTHFEAGDERAKEFAGILKSNDP 196
           S +IS ST   L +GRFVF  FQR  V++  +PEQNG           + +  +LK+NDP
Sbjct: 19  SFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTTRRVTAVRRRWWSMLKTNDP 78

Query: 197 VGFNLVDVLAWGSIGH 244
            GF LVDVLAWG++GH
Sbjct: 79  AGFTLVDVLAWGALGH 94

>PSAG_CHLRE (P14224) Photosystem I reaction center subunit V, chloroplast|
           precursor (PSI-G) (Light-harvesting complex I 10 kDa
           protein) (P35 protein)
          Length = 126

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
 Frame = +2

Query: 17  PSVVISLSTGLSLVMGRFVFFNFQRENV---AKQVPEQNGKTHFEAGDERAKEFAGILKS 187
           P +VIS ST   L +GRFVF  +QR      +   P+  G T+F+   + +  FA    +
Sbjct: 34  PQIVISGSTAAFLAIGRFVFLGYQRREANFDSTVGPKTTGATYFDDLQKNSTIFA----T 89

Query: 188 NDPVGFNLVDVLAWGSIGH 244
           NDP GFN++DV  WG++GH
Sbjct: 90  NDPAGFNIIDVAGWGALGH 108

>PSAG_PEA (P20120) Photosystem I reaction center subunit V (PSI-G)|
           (Photosystem I 9 kDa protein) (Fragment)
          Length = 39

 Score = 60.8 bits (146), Expect = 9e-10
 Identities = 31/36 (86%), Positives = 34/36 (94%), Gaps = 1/36 (2%)
 Frame = +2

Query: 17  PSVVISLSTGLSLVMGRFVFFNFQRENVAKQ-VPEQ 121
           PS+VISLSTGLSL +GRFVFFNFQRENVAKQ +PEQ
Sbjct: 4   PSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 39

>PSAK_CHLRE (P14225) Photosystem I reaction center subunit psaK, chloroplast|
           precursor (Photosystem I subunit X) (PSI-K)
           (Light-harvesting complex I 8.4 kDa protein) (P37
           protein)
          Length = 113

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = +2

Query: 158 AKEFAGILKSNDPVGFNLVDVLAWGSIGH 244
           +K  AG++ SNDP GF +VDVLA G+ GH
Sbjct: 70  SKNSAGVI-SNDPAGFTIVDVLAMGAAGH 97

>PSAK_MEDSA (Q9ZT05) Photosystem I reaction center subunit psaK, chloroplast|
           precursor (Photosystem I subunit X) (PSI-K)
          Length = 129

 Score = 34.3 bits (77), Expect = 0.088
 Identities = 26/75 (34%), Positives = 35/75 (46%)
 Frame = +2

Query: 20  SVVISLSTGLSLVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDPV 199
           +V++  ST L L  GRF              P  N K    AG +     +G L++ DP 
Sbjct: 54  NVIMVASTTLMLFAGRFGL-----------APSANRKA--TAGLKLETRDSG-LQTGDPA 99

Query: 200 GFNLVDVLAWGSIGH 244
           GF L D LA G++GH
Sbjct: 100 GFTLADTLACGTVGH 114

>PSAK_ARATH (Q9SUI5) Photosystem I reaction center subunit psaK, chloroplast|
           precursor (Photosystem I subunit X) (PSI-K)
          Length = 130

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 25/75 (33%), Positives = 34/75 (45%)
 Frame = +2

Query: 20  SVVISLSTGLSLVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDPV 199
           ++++  ST L L  GRF              P  N K    AG       +G L++ DP 
Sbjct: 54  NLIMVTSTTLMLFAGRFGL-----------APSANRKA--TAGLRLEARDSG-LQTGDPA 99

Query: 200 GFNLVDVLAWGSIGH 244
           GF L D LA G++GH
Sbjct: 100 GFTLADTLACGTVGH 114

>PSAK_HORVU (P36886) Photosystem I reaction center subunit psaK, chloroplast|
           precursor (Photosystem I subunit X) (PSI-K)
           (Light-harvesting complex I 7 kDa protein)
          Length = 131

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 179 LKSNDPVGFNLVDVLAWGSIGH 244
           L++ DP GF L D LA G++GH
Sbjct: 89  LQTGDPAGFTLADTLACGAVGH 110

>DNAJ_HYDTH (Q75VW3) Chaperone protein dnaJ|
          Length = 356

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 92  ENVAKQVPEQNGKTHFEAGDERAKEFAGILKSND 193
           EN +++  E N   H  + +ER KE+  ILKS D
Sbjct: 40  ENASEKFKEINEAYHILSDEERRKEYDRILKSGD 73

>ERG6_CANGA (Q6FRZ7) Sterol 24-C-methyltransferase (EC 2.1.1.41)|
           (Delta(24)-sterol C-methyltransferase)
          Length = 372

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = +2

Query: 41  TGLSLVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDV 220
           TGL+ ++ +    N QRE V+K +   +GKT  EA D R +++     S   V  +  + 
Sbjct: 26  TGLTALLSKNR--NAQREAVSKYLRHWDGKTDKEAEDRRLEDYNEATHSYYNVVTDFYE- 82

Query: 221 LAWGSIGH 244
             WGS  H
Sbjct: 83  YGWGSSFH 90

>TNNT1_BOVIN (Q8MKH6) Troponin T, slow skeletal muscle (TnTs) (Slow skeletal|
          muscle troponin T) (sTnT)
          Length = 262

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 79 EEDEAAHHERQPRAEADHHRRLPARP 2
          EE+E A  E +P AE +  R  P+RP
Sbjct: 20 EEEEEAPEEPEPAAEPEEERPKPSRP 45


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,411,277
Number of Sequences: 219361
Number of extensions: 386365
Number of successful extensions: 1902
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1899
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)