ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4b07 |
|---|---|
| Clone Library Name | barley_pub |
>AAPC_PENCL (Q40784) Putative apospory-associated protein C| Length = 329 Score = 52.8 bits (125), Expect = 2e-07 Identities = 26/54 (48%), Positives = 34/54 (62%) Frame = +3 Query: 171 GLPKISLKSPHGSEAEIYLFGACVTSWKVPSGKDLLFVRPDAVFNGQKPISGGI 332 GL K+ L+ AEIYL+G VTSWK +G++LLF+ A+F K I GGI Sbjct: 32 GLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGI 85
>YMY9_YEAST (Q03161) Hypothetical UPF0010 protein YMR099c| Length = 297 Score = 31.6 bits (70), Expect = 0.52 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +3 Query: 207 SEAEIYLFGACVTSWKVPSGKDLLFVRPDAVFNGQKPISGGI 332 + I +GA V SWK+ S ++ L++ A +G KP+ GGI Sbjct: 20 TSVHILKYGATVYSWKLKS-EEQLWLSTAAKLDGSKPVRGGI 60
>PDM2_DROVI (Q24705) POU domain protein 2 (didymous protein) (Pdm-2) (dPOU-28)| (dOct2) (miti-mere) (Fragment) Length = 471 Score = 30.8 bits (68), Expect = 0.88 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = -1 Query: 217 SASLPCGDLRLILGRPPLPSETATPVAYTFCPALAMATTPNRLWRRAEVEEAAAKGPGTV 38 S LP L + PL S + +PVA + P A T PN L +A P T Sbjct: 156 SEQLPTRHYSTPLSKSPLRSPSLSPVARSMEPQQAQRTPPNSLAAAGLGLSSAVLTPNTP 215 Query: 37 SVQE 26 S+Q+ Sbjct: 216 SMQQ 219
>ZN335_HUMAN (Q9H4Z2) Zinc finger protein 335| Length = 1342 Score = 30.4 bits (67), Expect = 1.1 Identities = 25/100 (25%), Positives = 35/100 (35%) Frame = -1 Query: 310 WPLNTASGLTKSRSFPLGTFQDVTHAPNR*ISASLPCGDLRLILGRPPLPSETATPVAYT 131 WPL GL + P + ++ ++S P L L PP P AT + Sbjct: 959 WPLLQCGGLPRDGPEPPSPAKTHCVGDSQSSASSPPATSKALGLAVPPSPPSAATAASKK 1018 Query: 130 FCPALAMATTPNRLWRRAEVEEAAAKGPGTVSVQEAAISA 11 F + P R E + A GPG + SA Sbjct: 1019 FSCKICAEAFPGR--AEMESHKRAHAGPGAFKCPDCPFSA 1056
>VTDB_BOVIN (Q3MHN5) Vitamin D-binding protein precursor (DBP) (Group-specific| component) (Gc-globulin) (VDB) Length = 474 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -1 Query: 277 SRSFPLGTFQDVTHAPNR*ISASLPC 200 SR FP GTF+ ++H N +S ++ C Sbjct: 49 SRKFPSGTFEQISHLVNEVVSLTVTC 74
>ACSA_RHOCA (O68040) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) Length = 656 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 151 PSPRATAACPRSASNPRTGVRLRFIYLEHALRLGRFPVERTCSLSD 288 P P AT P SA+NP GV+ + + A+R+G E +SD Sbjct: 430 PLPGATPTKPGSATNPFFGVKPVVLDPQTAVRIGEVECEGVLCISD 475
>SIRT1_HUMAN (Q96EB6) NAD-dependent deacetylase sirtuin-1 (EC 3.5.1.-) (hSIRT1)| (hSIR2) (SIR2-like protein 1) Length = 747 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/46 (41%), Positives = 19/46 (41%) Frame = -1 Query: 157 ETATPVAYTFCPALAMATTPNRLWRRAEVEEAAAKGPGTVSVQEAA 20 E P A CP A A LWR AE E AAA G AA Sbjct: 57 EREVPAAARGCPGAAAAA----LWREAEAEAAAAGGEQEAQATAAA 98
>TOM40_XENLA (Q7ZTM6) Probable mitochondrial import receptor subunit TOM40| homolog (Translocase of outer membrane 40 kDa subunit homolog) Length = 336 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = -1 Query: 178 GRPPLPSETATPVAYTFCPALAMATTPNRLWRRAEVEEAAAKGPGT 41 G PP+P + P +T P + TP+ + E +E PGT Sbjct: 16 GSPPVPGLVSVPPGFTMPPVAGLTPTPD----KKEPQEERLPNPGT 57
>TOM40_XENTR (Q6P825) Probable mitochondrial import receptor subunit TOM40| homolog (Translocase of outer membrane 40 kDa subunit homolog) Length = 336 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = -1 Query: 178 GRPPLPSETATPVAYTFCPALAMATTPNRLWRRAEVEEAAAKGPGT 41 G PP P + P +T P + TP+ + E +E PGT Sbjct: 16 GSPPAPGLVSVPPGFTMPPVAGLTPTPD----KKETQEDRLPNPGT 57
>TRI2_STRCO (Q9RKB9) Putative tricorn protease homolog 2 (EC 3.4.21.-)| Length = 1171 Score = 28.9 bits (63), Expect = 3.3 Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 3/34 (8%) Frame = +1 Query: 76 QPVATGDSGWLPWP---ARGRRCTRPAWPSPRAT 168 +PVA G WL WP A G PA PS R T Sbjct: 664 EPVAGGGLVWLRWPISGALGETFANPADPSERPT 697
>N4BP2_HUMAN (Q86UW6) NEDD4-binding protein 2 (EC 3.-.-.-) (N4BP2)| (BCL-3-binding protein) Length = 1770 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = -1 Query: 142 VAYTFCPALAMATTPNRLWRRAEVEEAAAKGPGTVSVQEAAISASCR 2 V YTF P++ T+P ++WR + G VQE +S R Sbjct: 393 VNYTFPPSVISHTSPTKVWRNKD-------GTSAYQVQETPVSQVVR 432
>HISX_PROAC (Q6A8L5) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 439 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 Query: 173 AAVALGDGHAGRVHLLPRAGHGNH 102 A V+LGD AG H+LP AG H Sbjct: 364 APVSLGDYSAGSTHVLPTAGAACH 387
>FBXL6_HUMAN (Q8N531) F-box/LRR-repeat protein 6 (F-box and leucine-rich repeat| protein 6) (F-box protein FBL6) (FBL6A) Length = 539 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/58 (24%), Positives = 24/58 (41%) Frame = -1 Query: 181 LGRPPLPSETATPVAYTFCPALAMATTPNRLWRRAEVEEAAAKGPGTVSVQEAAISAS 8 + R +P + CP L + N +W A GPG S++E +++S Sbjct: 309 INRNSIPLQLPVEALQKGCPQLQVLRLLNLMWLPKPPGRGVAPGPGFPSLEELCLASS 366
>PFLE_ECOLI (P75794) Putative pyruvate formate-lyase 3-activating enzyme (EC| 1.97.1.4) (PFL-activating enzyme 3) (Formate-C-acetyltransferase-activating enzyme 3) Length = 308 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Frame = -3 Query: 290 WSDKEQVLSTGNLPRRNACSK*INLSLTPVRGFEADLGQAAV----ALGDGHAGRVHLLP 123 W+D NL + A K I + + ++GF AD A + H G +H LP Sbjct: 202 WTDGNAARVLDNLKKLAAAGKKIIIRVPLIQGFNADETSVKAITDFAADELHVGEIHFLP 261
>SYK1_METMA (Q8PWA0) Lysyl-tRNA synthetase 1 (EC 6.1.1.6) (Lysine--tRNA ligase| 1) (LysRS 1) Length = 537 Score = 28.1 bits (61), Expect = 5.7 Identities = 18/48 (37%), Positives = 22/48 (45%) Frame = -3 Query: 251 PRRNACSK*INLSLTPVRGFEADLGQAAVALGDGHAGRVHLLPRAGHG 108 PR N C K ++ T V GF+ D GH+G V P AG G Sbjct: 171 PRCNECGK---ITTTKVTGFDPDAETVDYVCACGHSGTV---PMAGGG 212
>H103_CHICK (P08285) Histone H1.03| Length = 223 Score = 28.1 bits (61), Expect = 5.7 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 12/79 (15%) Frame = +1 Query: 79 PVATGDSGWLPWPAR------------GRRCTRPAWPSPRATAACPRSASNPRTGVRLRF 222 PVA D P PA+ G + +PA PS SAS R G+ L Sbjct: 5 PVAAPDVAAAPTPAKAAPAKKPKKAAGGAKARKPAGPSVTELITKAVSASKERKGLSL-- 62 Query: 223 IYLEHALRLGRFPVERTCS 279 L+ AL G + VE++ S Sbjct: 63 AALKKALAAGGYDVEKSNS 81
>TPP1_MOUSE (O89023) Tripeptidyl-peptidase 1 precursor (EC 3.4.14.9)| (Tripeptidyl-peptidase I) (TPP-I) (Tripeptidyl aminopeptidase) (Lysosomal pepstatin insensitive protease) (LPIC) Length = 562 Score = 27.7 bits (60), Expect = 7.4 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +1 Query: 85 ATGDSGWLPWPARGRRCTRPAWP--SPRATAACPRSASNP 198 A+GD+G W GR RP++P SP T S NP Sbjct: 356 ASGDTGAGCWSVSGRHKFRPSFPASSPYVTTVGGTSFKNP 395
>TR19L_MACFA (Q9N092) Tumor necrosis factor receptor superfamily member 19L| precursor (Receptor expressed in lymphoid tissues) Length = 430 Score = 27.7 bits (60), Expect = 7.4 Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 16/81 (19%) Frame = +1 Query: 130 RCTRPAWP----SPRATAAC-------PRSASNPRTGVRLR-----FIYLEHALRLGRFP 261 RC++ WP SP A AA P P+ G + I R+ R P Sbjct: 297 RCSQKKWPEVLLSPEAVAATTSAPSFLPNPTRVPKAGAKAGRQGEITILSVGRFRVARIP 356 Query: 262 VERTCSLSDQMLCSTARNPSA 324 +RT S+ ++ T PSA Sbjct: 357 EQRTGSMVSEVKTITEAGPSA 377
>HISX_MYCLE (Q9CC57) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 449 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 Query: 173 AAVALGDGHAGRVHLLPRAGHGNH 102 A V+LGD AG H+LP AG H Sbjct: 374 APVSLGDYCAGSNHVLPTAGFARH 397
>YFBB_ECOLI (P37355) Acyl-CoA thioester hydrolase yfbB (EC 3.1.2.-)| Length = 252 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -3 Query: 164 ALGDGHAGRVHLLPRAGHGNHPESP 90 AL A H++PRAGH H E+P Sbjct: 215 ALAAELAADCHVIPRAGHNAHRENP 239
>TPP1_RAT (Q9EQV6) Tripeptidyl-peptidase 1 precursor (EC 3.4.14.9)| (Tripeptidyl-peptidase I) (TPP-I) (Tripeptidyl aminopeptidase) Length = 563 Score = 27.7 bits (60), Expect = 7.4 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +1 Query: 85 ATGDSGWLPWPARGRRCTRPAWP--SPRATAACPRSASNP 198 A+GD+G W GR RP++P SP T S NP Sbjct: 357 ASGDTGAGCWSVSGRHKFRPSFPASSPYVTTVGGTSFKNP 396
>ISY1_HUMAN (Q9ULR0) Pre-mRNA-splicing factor ISY1 homolog| Length = 331 Score = 27.3 bits (59), Expect = 9.7 Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 4/33 (12%) Frame = +1 Query: 127 RRCTRPAW----PSPRATAACPRSASNPRTGVR 213 R TRPA PSPRAT A P S P T R Sbjct: 286 RSGTRPARSGSAPSPRATTAVPMGPSLPTTSPR 318
>RL1_HHV11 (O12396) Neurovirulence factor RL1 (Neurovirulence factor ICP34.5)| Length = 248 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +1 Query: 121 RGRRCTRPAWPSPRATAACPRSASNPRTGVRLRF 222 R RR P P AT A P + + P T R+RF Sbjct: 147 RLRRAGGEGAPEPPATPATPATPATPATPARVRF 180
>ICP34_HHV11 (P36313) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 248 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +1 Query: 121 RGRRCTRPAWPSPRATAACPRSASNPRTGVRLRF 222 R RR P P AT A P + + P T R+RF Sbjct: 147 RLRRAGGEGAPEPPATPATPATPATPATPARVRF 180
>SEL9_CAEEL (O17528) Suppressor/enhancer of lin-12 protein 9 precursor| Length = 203 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -1 Query: 136 YTFCPALAMAT-TPNRLWRRAEVEEAAAKGPGTVSVQEAAISA 11 YT+C M+T TP + E+ E + PG + Q+AA +A Sbjct: 88 YTYCFGNKMSTMTPKAVMFTVEITEPHQQAPGAAANQDAADNA 130
>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 27.3 bits (59), Expect = 9.7 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +3 Query: 123 GQKVYATGVAVSEGNGGLPK----ISLKSPHGSEAEIYLFGACVTSWKVPSGKDLLFVRP 290 G K +A V + +G+GGL + K S+ ++ F T+ + PSG +++RP Sbjct: 19 GGKFHAEYVWI-DGDGGLRSKTTTVDQKVTDISQLRVWDFDGSSTN-QAPSGNSDVYLRP 76 Query: 291 DAVFNGQKPISGG 329 A+F + P GG Sbjct: 77 SAIF--KDPFRGG 87
>GP123_HUMAN (Q86SQ6) Probable G-protein coupled receptor 123| Length = 1280 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -1 Query: 220 ISASLPCGDLRLILGRPPLPSETATPVAYTFCPALAM 110 ++A +P DL+ +L P P E PV Y C A+ + Sbjct: 714 LAACIPTQDLKTVLSLPRYPGEFLHPVVYA-CTAVML 749 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,677,165 Number of Sequences: 219361 Number of extensions: 1019641 Number of successful extensions: 3230 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3228 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
