>PCXB_ACIAD (P20372) Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)|
           (3,4-PCD)
          Length = 241

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 27  IHAMLVHIGWSAALLSQFYFSFQSYVNIRAYVFKHLPT*AEKDA 158
           IH  L+  GW+  L+SQFYF   + ++    + K +P+  ++ A
Sbjct: 162 IHFSLIADGWAQRLISQFYFEGDTLID-SCPILKTIPSEQQRRA 204

>VEF_GVPU (P41723) Viral-enhancing factor (VEF) (Enhancin) (104 kDa|
           glycoprotein) (Synergistic factor)
          Length = 901

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
 Frame = +3

Query: 12  VEVTDIHAMLVHIGWSAA---LLSQFYFSFQS-YVNIRAYVFKHLPT*AEKDAYENHSTG 179
           +EV   H  +  + W      ++++ YF     ++ +  YVF   P    K  Y   S+G
Sbjct: 80  MEVEHAHESVPFVDWPVGERNIMAEVYFEIDGPHIPLPVYVFNTRPVEHFKSEYRQSSSG 139

Query: 180 YTY 188
           Y +
Sbjct: 140 YCF 142

>YD183_YEAST (P48569) Hypothetical 37.0 kDa protein in RPL41A-INH1 intergenic|
           region
          Length = 320

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 12/20 (60%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
 Frame = +3

Query: 78  FYFSFQSYVNIRAYV-FKHL 134
           FY S+++YVNI+AY+  KHL
Sbjct: 218 FYLSYRAYVNIKAYLGAKHL 237


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,098,379
Number of Sequences: 219361
Number of extensions: 493907
Number of successful extensions: 999
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 80,573,946
effective HSP length: 46
effective length of database: 70,483,340
effective search space used: 1691600160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)