ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| basd3k18 | 679 | AV923079 | not_full | dbj|AB180740.1| Aegilops speltoides mRNA for WNdr1B-like protein kinase, complete cds Length = 2093 | 107 | not_full | SGO1_KLULA (Q6CXI9) Shugoshin Length = 594 | 18 | -- | --- | - | -- | --- | - |
| basd3k17 | 419 | AV923078 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 393 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 175 | -- | --- | - | -- | --- | - |
| basd3k14 | 613 | AV923077 | not_full | dbj|AK068892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G22, full insert sequence Length = 2157 | 71 | not_full | SMAP1_MOUSE (Q91VZ6) Stromal membrane-associated protein 1 Length = 440 | 80 | -- | --- | - | -- | --- | - |
| basd3k13 | 697 | AV923076 | not_full | emb|X96979.1|HVLTP7A2B H.vulgare mRNA for lipid transfer protein 7a2b Length = 755 | 233 | not_full | NLTP3_HORVU (Q43766) Nonspecific lipid-transfer protein 3 precursor (LTP 3) (CW20) (CW-20) (CW-19) Length = 118 | 80 | -- | --- | - | -- | --- | - |
| basd3k11 | 432 | AV923075 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd3k09 | 326 | AV923074 | not_full | emb|X96979.1|HVLTP7A2B H.vulgare mRNA for lipid transfer protein 7a2b Length = 755 | 47 | not_full | NLTP3_HORVU (Q43766) Nonspecific lipid-transfer protein 3 precursor (LTP 3) (CW20) (CW-20) (CW-19) Length = 118 | 103 | -- | --- | - | -- | --- | - |
| basd3k08 | 636 | AV923073 | not_full | ref|XM_464101.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3420 | 91 | not_full | MTA_STRPU (P04734) Metallothionein-A (MTA) Length = 64 | 6 | -- | --- | - | -- | --- | - |
| basd3k06 | 615 | AV923072 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_KLULA (Q6CQE5) Protein TAR1 Length = 109 | 5 | -- | --- | - | -- | --- | - |
| basd3k05 | 438 | AV836288 | not_full | dbj|AK065132.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P15, full insert sequence Length = 1185 | 48 | not_full | RWDD1_RAT (Q99ND9) RWD domain-containing protein 1 (Small androgen receptor-interacting protein) Length = 243 | 4 | -- | --- | - | -- | --- | - |
| basd3k04 | 523 | AV836287 | not_full | gb|BT009579.1| Triticum aestivum clone wre1n.pk0036.g10:fis, full insert mRNA sequence Length = 857 | 21 | not_full | SUV3_DROME (P20193) Protein suppressor of variegation 3-7 Length = 1250 | 6 | -- | --- | - | -- | --- | - |
| basd3k02 | 589 | AV923071 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 79 | not_full | ESM1_DROME (O97176) Enhancer of split M1 protein precursor (E(spl)m1) Length = 156 | 8 | -- | --- | - | -- | --- | - |
| basd3k01 | 631 | AV923070 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd3j24 | 659 | AV923069 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 432 | not_full | RBS2_ORYSA (P18566) Ribulose bisphosphate carboxylase small chain A, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit A) Length = 175 | 162 | -- | --- | - | -- | --- | - |
| basd3j23 | 626 | AV923068 | full | emb|X95257.1|HVXYLISOP H.vulgare mRNA for xylose isomerase Length = 1710 | 283 | not_full | XYLA_HORVU (Q40082) Xylose isomerase (EC 5.3.1.5) Length = 479 | 61 | -- | --- | - | -- | --- | - |
| basd3j22 | 571 | AV923067 | not_full | gb|BT017879.1| Zea mays clone EL01N0513H12.c mRNA sequence Length = 763 | 500 | not_full | UBE2I_XENLA (P63282) Ubiquitin-conjugating enzyme E2 I (EC 6.3.2.19) (Ubiquitin-protein ligase I) (Ubiquitin carrier protein I) (SUMO-1-protein ligase) (SUMO-1-conjugating enzyme) (Ubiquitin carrier protein 9) Length = 158 | 175 | -- | --- | - | -- | --- | - |
| basd3j21 | 538 | AV923066 | not_full | ref|XM_476648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 730 | 72 | not_full | RS12_HORVU (Q9XHS0) 40S ribosomal protein S12 Length = 143 | 80 | -- | --- | - | -- | --- | - |
| basd3j20 | 652 | AV836286 | not_full | ref|XM_483710.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1743 | 68 | not_full | TSCC1_MOUSE (Q8K0G5) Protein TSSC1 Length = 386 | 302 | -- | --- | - | -- | --- | - |
| basd3j18 | 584 | AV923065 | not_full | gb|AF021939.1|AF021939 Hordeum vulgare catalase 2 (CAT2) gene, partial cds Length = 1326 | 175 | not_full | CATA2_HORVU (P55308) Catalase isozyme 2 (EC 1.11.1.6) Length = 494 | 133 | -- | --- | - | -- | --- | - |
| basd3j17 | 456 | AV923064 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | RPOA_PRRS1 (Q9YN02) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes: Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP | 10 | -- | --- | - | -- | --- | - |
| basd3j15 | 142 | AV923063 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | Y1003_ARCFU (O29259) Hypothetical protein AF1003 Length = 211 | 1 | -- | --- | - | -- | --- | - |
| basd3j14 | 612 | AV923062 | not_full | dbj|AK071098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081C09, full insert sequence Length = 1505 | 107 | not_full | MARH4_HUMAN (Q9P2E8) Membrane-associated RING finger protein 4 (Membrane-associated RING-CH protein IV) (MARCH-IV) (RING finger protein 174) Length = 410 | 29 | -- | --- | - | -- | --- | - |
| basd3j12 | 615 | AV923061 | full | ref|XM_475314.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1032 | 168 | not_full | F16P2_SACHY (Q43139) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) Length = 343 | 56 | -- | --- | - | -- | --- | - |
| basd3j10 | 420 | AV923060 | not_full | gb|BT009075.1| Triticum aestivum clone wip1c.pk004.o24:fis, full insert mRNA sequence Length = 1777 | 50 | not_full | ADA3_YEAST (P32494) Transcriptional adapter 3 (NGG1 protein) Length = 702 | 5 | -- | --- | - | -- | --- | - |
| basd3j08 | 675 | AV923059 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| basd3j05 | 452 | AV923058 | not_full | emb|Z11889.1|MITTARRNG T.aestivum mitochondrion rrn26 gene for rRNA large subunit (26S) Length = 7242 | 500 | not_full | M030_ARATH (P93276) Hypothetical mitochondrial protein AtMg00030 (ORF107a) Length = 107 | 8 | -- | --- | - | -- | --- | - |
| basd3j04 | 463 | AV923057 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| basd3j03 | 193 | AV923056 | not_full | gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine synthetase 1 mRNA, complete cds Length = 1973 | 41 | not_full | GPA5_CAEEL (Q20701) Guanine nucleotide-binding protein alpha-5 subunit Length = 385 | 3 | -- | --- | - | -- | --- | - |
| basd3i24 | 617 | AV923055 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 262 | not_full | TSHR_HUMAN (P16473) Thyrotropin receptor precursor (TSH-R) (Thyroid-stimulating hormone receptor) Length = 764 | 1 | -- | --- | - | -- | --- | - |
| basd3i23 | 610 | AV923054 | full | emb|AJ238745.1|HVU238745 Hordeum vulgare mRNA for glutathione peroxidase-like protein GPX54Hv Length = 915 | 231 | full | GPX4_CITSI (Q06652) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) (Salt-associated protein) Length = 167 | 111 | -- | --- | - | -- | --- | - |
| basd3i22 | 614 | AV923053 | not_full | ref|NM_191150.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1008 | 69 | not_full | IAA6_ORYSA (Q8LQ74) Auxin-responsive protein IAA6 (Indoleacetic acid-induced protein 6) Length = 335 | 5 | -- | --- | - | -- | --- | - |
| basd3i21 | 520 | AV923052 | not_full | gb|AY106210.1| Zea mays PCO090267 mRNA sequence Length = 586 | 56 | full | NIPM_HUMAN (O43920) NADH-ubiquinone oxidoreductase 15 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-15 kDa) (CI-15 kDa) Length = 105 | 3 | -- | --- | - | -- | --- | - |
| basd3i20 | 669 | AV923051 | not_full | emb|X96979.1|HVLTP7A2B H.vulgare mRNA for lipid transfer protein 7a2b Length = 755 | 282 | not_full | NLTP3_HORVU (Q43766) Nonspecific lipid-transfer protein 3 precursor (LTP 3) (CW20) (CW-20) (CW-19) Length = 118 | 80 | -- | --- | - | -- | --- | - |
| basd3i19 | 548 | AV923050 | full | gb|U49505.1|HVU49505 Hordeum vulgare profilin (Hvpro1) mRNA, complete cds Length = 780 | 500 | not_full | PROF1_HORVU (P52184) Profilin-1 Length = 131 | 107 | -- | --- | - | -- | --- | - |
| basd3i17 | 619 | AV923049 | not_full | emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 | 414 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 164 | -- | --- | - | -- | --- | - |
| basd3i15 | 487 | AV923048 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA protein 1) Length = 124 | 3 | -- | --- | - | -- | --- | - |
| basd3i14 | 645 | AV923047 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_KLULA (Q6CQE5) Protein TAR1 Length = 109 | 4 | -- | --- | - | -- | --- | - |
| basd3i06 | 604 | AV923046 | not_full | dbj|AK070062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042K05, full insert sequence Length = 1981 | 80 | not_full | KSG4_ARATH (Q9FVS6) Shaggy-related protein kinase delta (EC 2.7.11.1) (ASK-delta) Length = 420 | 16 | -- | --- | - | -- | --- | - |
| basd3i05 | 565 | AV923045 | not_full | dbj|AK065550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025M24, full insert sequence Length = 1941 | 130 | not_full | ATG8_PHYIN (Q8H715) Autophagy-related protein 8 precursor (Autophagy-related ubiquitin-like modifier ATG8) Length = 116 | 48 | -- | --- | - | -- | --- | - |
| basd3i03 | 603 | AV923044 | not_full | gb|BT008914.1| Triticum aestivum clone wpa1c.pk002.f9:fis, full insert mRNA sequence Length = 1493 | 132 | not_full | DNJH2_ALLPO (P42824) DnaJ protein homolog 2 Length = 418 | 299 | -- | --- | - | -- | --- | - |
| basd3i02 | 576 | AV923043 | not_full | emb|X16000.1|HVGLN2 Hordeum vulgare mRNA for glutamine synthetase precursor (EC 6.3.1.2) Length = 1549 | 264 | not_full | GLNA2_HORVU (P13564) Glutamine synthetase leaf isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Chloroplast GS2) Length = 434 | 114 | -- | --- | - | -- | --- | - |
| basd3i01 | 601 | AV836285 | not_full | ref|XM_476058.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 | 40 | not_full | SNF12_YEAST (P53628) Transcription regulatory protein SNF12 (SWI/SNF complex component SWP73) Length = 566 | 11 | -- | --- | - | -- | --- | - |
| basd3h24 | 435 | AV923042 | not_full | ref|XM_472416.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 429 | 62 | not_full | MYCN_MARMO (Q61976) N-myc proto-oncogene protein (N-myc1) Length = 460 | 24 | -- | --- | - | -- | --- | - |
| basd3h23 | 603 | AV923041 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 33 | not_full | TAF1_DROME (P51123) Transcription initiation factor TFIID subunit 1 (EC 2.7.11.1) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230) (TAFII250) (TBP-associated factor 230 kDa) (p230) Length = 2129 | 84 | -- | --- | - | -- | --- | - |
| basd3h22 | 578 | AV923040 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| basd3h21 | 553 | AV923039 | not_full | gb|AC107627.3| Homo sapiens chromosome 1 clone RP1-281L18, complete sequence Length = 90509 | 49 | not_full | DPO3_LACLA (Q9CDT7) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII) Length = 1638 | 9 | -- | --- | - | -- | --- | - |
| basd3h20 | 492 | AV923038 | not_full | gb|AF239818.1| Zea mays protein kinase CK2 regulatory subunit CK2B3 mRNA, complete cds Length = 1380 | 87 | not_full | CSK2E_ARATH (O80507) Putative casein kinase II subunit beta-4 (CK II beta-4) Length = 283 | 52 | -- | --- | - | -- | --- | - |
| basd3h19 | 580 | AV836284 | not_full | gb|AC136149.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0060B06, complete sequence Length = 162568 | 160 | not_full | COX2_APILI (P20375) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II) Length = 225 | 9 | -- | --- | - | -- | --- | - |
| basd3h18 | 590 | AV923037 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA protein 1) Length = 124 | 2 | -- | --- | - | -- | --- | - |
| basd3h17 | 468 | AV923036 | not_full | gb|AF079588.1|AF079588 Sorghum bicolor 1-aminocyclopropane-1-carboxylate oxidase (ACO1) mRNA, complete cds Length = 1444 | 161 | not_full | ACCO_MUSAC (Q9FR99) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 306 | 98 | -- | --- | - | -- | --- | - |
| basd3h16 | 661 | AV923035 | not_full | gb|AY108613.1| Zea mays PCO091786 mRNA sequence Length = 597 | 500 | not_full | VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B) Length = 588 | 12 | -- | --- | - | -- | --- | - |
