Clone Name | basd3j21 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_476648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 730 Score = 365 bits (184), Expect = 1e-97 Identities = 295/332 (88%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||||||||||||||| ||||| ||||| |||||||| ||||| || || | Sbjct: 182 tgaagaagtcaagtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggcca 241 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 | |||||||||||||||||| | ||||||||||||||||| |||||||| |||||||||| Sbjct: 242 tcgagaagcatgctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatg 301 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||| | || ||||| || ||||||||||||||||||||| | || ||||||||||||| Sbjct: 302 tcaagttggttaaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtg 361 Query: 182 ccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaa 241 | || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 362 ctaagactcttggcgagtgggcagggctttgcaagattgactctgagggcaaggcaagga 421 Query: 242 aggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttc 301 |||| ||||||||||| || |||||||| ||||||||||||||||| || ||||| ||| Sbjct: 422 aggttgtgggctgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggcctta 481 Query: 302 acatcgtgcaggaatacgtcaagtcgcactag 333 |||| |||||||| || ||||| ||||||||| Sbjct: 482 acatagtgcaggactatgtcaaatcgcactag 513
>dbj|AK121635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051C16, full insert sequence Length = 734 Score = 365 bits (184), Expect = 1e-97 Identities = 295/332 (88%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||||||||||||||| ||||| ||||| |||||||| ||||| || || | Sbjct: 186 tgaagaagtcaagtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggcca 245 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 | |||||||||||||||||| | ||||||||||||||||| |||||||| |||||||||| Sbjct: 246 tcgagaagcatgctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatg 305 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||| | || ||||| || ||||||||||||||||||||| | || ||||||||||||| Sbjct: 306 tcaagttggttaaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtg 365 Query: 182 ccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaa 241 | || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 366 ctaagactcttggcgagtgggcagggctttgcaagattgactctgagggcaaggcaagga 425 Query: 242 aggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttc 301 |||| ||||||||||| || |||||||| ||||||||||||||||| || ||||| ||| Sbjct: 426 aggttgtgggctgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggcctta 485 Query: 302 acatcgtgcaggaatacgtcaagtcgcactag 333 |||| |||||||| || ||||| ||||||||| Sbjct: 486 acatagtgcaggactatgtcaaatcgcactag 517
>dbj|AK058680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-A01, full insert sequence Length = 730 Score = 365 bits (184), Expect = 1e-97 Identities = 295/332 (88%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||||||||||||||| ||||| ||||| |||||||| ||||| || || | Sbjct: 182 tgaagaagtcaagtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggcca 241 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 | |||||||||||||||||| | ||||||||||||||||| |||||||| |||||||||| Sbjct: 242 tcgagaagcatgctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatg 301 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||| | || ||||| || ||||||||||||||||||||| | || ||||||||||||| Sbjct: 302 tcaagttggttaaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtg 361 Query: 182 ccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaa 241 | || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 362 ctaagactcttggcgagtgggcagggctttgcaagattgactctgagggcaaggcaagga 421 Query: 242 aggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttc 301 |||| ||||||||||| || |||||||| ||||||||||||||||| || ||||| ||| Sbjct: 422 aggttgtgggctgctcctgcgtcgttgtcaaggactatggtgaagagtctgagggcctta 481 Query: 302 acatcgtgcaggaatacgtcaagtcgcactag 333 |||| |||||||| || ||||| ||||||||| Sbjct: 482 acatagtgcaggactatgtcaaatcgcactag 513
>gb|AF067732.1|AF067732 Hordeum vulgare ribosomal protein S12 (rps12) mRNA, complete cds Length = 760 Score = 319 bits (161), Expect = 5e-84 Identities = 284/325 (87%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||||||||||||||||||||| ||||| |||||||| ||||| || | | Sbjct: 199 tgaagaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtcca 258 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 |||||||||||||||||||| | |||||||| ||||||||||| |||||||||||||| | Sbjct: 259 ttgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacg 318 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 |||||||||| |||||||| || ||||||||||| |||||| |||| || ||||| |||| Sbjct: 319 tgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtg 378 Query: 182 ccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaa 241 | |||||||| || |||||||| |||||||||||||| ||| |||||||||||||||| | Sbjct: 379 ctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagga 438 Query: 242 aggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttc 301 |||| || |||||||| || | ||||| ||||||||||||||||| || ||||| ||| Sbjct: 439 aggttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatccgagggcctta 498 Query: 302 acatcgtgcaggaatacgtcaagtc 326 ||||||||||| | || |||||||| Sbjct: 499 acatcgtgcagcagtatgtcaagtc 523
>gb|AY104036.1| Zea mays PCO068483 mRNA sequence Length = 845 Score = 317 bits (160), Expect = 2e-83 Identities = 289/332 (87%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||| ||||||||||||||||||| ||||| || ||||| ||||| ||||| | Sbjct: 250 tgaagaagtcaggtgctcatgatggccttgtgaagggtcttcgtgaggctgccaaagcca 309 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 | ||||||||||| |||||| |||| |||||||| ||||| ||||||||||||||||||| Sbjct: 310 tcgagaagcatgccgctcagctctgcgtgcttgccgaggactgcgaccagcctgattatg 369 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||||| || ||||| ||||| ||||||||||| || ||| |||| || |||||||| | Sbjct: 370 tcaagctggtgaaggctctctgcgctgagcacaatgtccacctggttactgtgcctagcg 429 Query: 182 ccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaa 241 ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 430 ccaaaactcttggagagtgggctgggctttgcaagatcgactctgagggcaaggcgagga 489 Query: 242 aggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttc 301 |||| || |||||||| ||||| ||||| |||||||| || ||||| || || || ||| Sbjct: 490 aggttgtaggctgctcctgtgttgttgtcaaggactacggcgaagaatctgaaggcctta 549 Query: 302 acatcgtgcaggaatacgtcaagtcgcactag 333 |||| |||||||| |||||||| ||||||||| Sbjct: 550 acatagtgcaggagtacgtcaaatcgcactag 581
>gb|AY109069.1| Zea mays PCO128954 mRNA sequence Length = 755 Score = 309 bits (156), Expect = 5e-81 Identities = 288/332 (86%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||||||||||||||| ||||| ||||| || || || ||||| || || | Sbjct: 220 tgaagaagtcaagtgctcatgatggacttgtgaagggtcttcgcgaggctgccaaggcca 279 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 |||||||||||||||||||| | || || ||||||||||| || |||||||| ||||||| Sbjct: 280 ttgagaagcatgctgctcagctttgcgttcttgctgaggactgtgaccagccagattatg 339 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||||| || ||||| ||||||||||| ||||| |||||| | ||||| || ||| || Sbjct: 340 tcaagctggtgaaggcgctctgtgctgaacacaatgttcaccttgtcactgttcctgctg 399 Query: 182 ccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaa 241 | || |||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 400 ctaagactcttggcgagtgggctgggctttgcaagattgactccgagggcaaggcaagga 459 Query: 242 aggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttc 301 |||| || |||||||| ||||||||||| |||||||| |||||||| || ||||| ||| Sbjct: 460 aggttgtaggctgctcctgtgtcgttgtcaaggactacggtgaagaatctgagggcctta 519 Query: 302 acatcgtgcaggaatacgtcaagtcgcactag 333 |||| |||||||| || ||||||||||||||| Sbjct: 520 acatagtgcaggagtatgtcaagtcgcactag 551
>ref|XM_477173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 751 Score = 293 bits (148), Expect = 3e-76 Identities = 286/332 (86%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||| ||||||||||| || || ||||| |||||||| || || || || | Sbjct: 205 tgaagaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggcca 264 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 ||||||||||||| |||||| | || |||||||||||||| || |||||||||||||||| Sbjct: 265 ttgagaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatg 324 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||| | |||||||||||||| ||||||||||| |||||| | || ||||||||||||| Sbjct: 325 tcaagttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtg 384 Query: 182 ccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaa 241 | |||||||||||||||||||| ||||||||||||||||| |||||||||||||| || | Sbjct: 385 ctaaaactcttggcgagtgggcagggctttgcaagattgattctgagggcaaggcgagga 444 Query: 242 aggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttc 301 |||| || |||||||| || |||||||| ||||||| |||||||| || ||||| || Sbjct: 445 aggtcgtaggctgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctca 504 Query: 302 acatcgtgcaggaatacgtcaagtcgcactag 333 |||| || ||||| || |||||||| |||||| Sbjct: 505 acatagtccaggactatgtcaagtcccactag 536
>gb|BT018309.1| Zea mays clone EL01T0206H08.c mRNA sequence Length = 608 Score = 293 bits (148), Expect = 3e-76 Identities = 286/332 (86%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 |||||||||| ||||||||||||||||||| ||||| || ||||| ||||| ||||| | Sbjct: 170 tgaagaagtcgggtgctcatgatggccttgttaagggtcttcgtgaggctgccaaagcaa 229 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 |||||||||||||||||||| | || |||||||| ||||| || |||||||||||||||| Sbjct: 230 ttgagaagcatgctgctcagctttgcgtgcttgcggaggactgtgaccagcctgattatg 289 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||||| || ||||| || || ||||||||||||||||| |||| || |||||||| | Sbjct: 290 tcaagctggtgaaggctctttgctctgagcacaacgttcacctggttactgtgcctagcg 349 Query: 182 ccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaa 241 | |||||||||||||| ||| ||||||||||||||||||| |||||||||||||| || | Sbjct: 350 ctaaaactcttggcgaatggtctgggctttgcaagattgattctgagggcaaggcgagga 409 Query: 242 aggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttc 301 |||| ||||| ||||| ||||| || || ||||||||||| ||||| || ||||| ||| Sbjct: 410 aggttgtgggttgctcctgtgttgtcgtcaaggactatggcgaagaatctgagggcctta 469 Query: 302 acatcgtgcaggaatacgtcaagtcgcactag 333 |||| || ||||| ||||||||||| |||||| Sbjct: 470 acatagttcaggagtacgtcaagtcacactag 501
>gb|BT017926.1| Zea mays clone EL01N0519G01.c mRNA sequence Length = 580 Score = 293 bits (148), Expect = 3e-76 Identities = 286/332 (86%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 |||||||||||||||||||||| || ||||| ||||| |||||||| ||||| || || | Sbjct: 20 tgaagaagtcaagtgctcatgacggacttgtgaagggtctccgtgaggctgccaaggcca 79 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 | |||||||| || |||||| | || |||||||||||||| || |||||||| ||||| | Sbjct: 80 tcgagaagcacgccgctcagctttgcgtgcttgctgaggactgtgaccagccagattacg 139 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||||| || ||||||||||| ||||||||||| |||||| ||||||| || ||| | Sbjct: 140 tcaagctggtgaaggcactctgcgctgagcacaatgttcacctggtcactgttcctgccg 199 Query: 182 ccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaa 241 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 200 ctaagactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagga 259 Query: 242 aggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttc 301 |||| || |||||||| || ||||| || |||||||| |||||||| || ||||| ||| Sbjct: 260 aggttgtaggctgctcctgcgtcgtcgtcaaggactacggtgaagaatctgagggcctta 319 Query: 302 acatcgtgcaggaatacgtcaagtcgcactag 333 |||| |||||||| || ||||||||||||||| Sbjct: 320 acatagtgcaggagtatgtcaagtcgcactag 351
>gb|BT017581.1| Zea mays clone EL01N0429E05.c mRNA sequence Length = 747 Score = 293 bits (148), Expect = 3e-76 Identities = 286/332 (86%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||| | | | ||||||||||||| ||||| || ||||| ||||| ||||| | Sbjct: 157 tgaagaagtcagggggtgatgatggccttgtgaagggtcttcgtgaggctgccaaagcca 216 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 | ||||||||||| |||||| |||| |||||||| ||||| ||||||||||||||||||| Sbjct: 217 tcgagaagcatgccgctcagctctgcgtgcttgccgaggactgcgaccagcctgattatg 276 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||||| || ||||| ||||| ||||||||||| || ||| |||| || |||||||| | Sbjct: 277 tcaagctggtgaaggctctctgcgctgagcacaatgtccacctggttactgtgcctagcg 336 Query: 182 ccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaa 241 ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 337 ccaaaactcttggagagtgggctgggctttgcaagatcgactctgagggcaaggcgagga 396 Query: 242 aggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttc 301 |||| || |||||||| ||||| ||||| |||||||| || ||||| || || || ||| Sbjct: 397 aggttgtaggctgctcctgtgttgttgtcaaggactacggcgaagaatctgaaggcctta 456 Query: 302 acatcgtgcaggaatacgtcaagtcgcactag 333 |||| |||||||| |||||||| ||||||||| Sbjct: 457 acatagtgcaggagtacgtcaaatcgcactag 488
>dbj|AK121720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080B09, full insert sequence Length = 754 Score = 293 bits (148), Expect = 3e-76 Identities = 286/332 (86%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||| ||||||||||| || || ||||| |||||||| || || || || | Sbjct: 202 tgaagaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggcca 261 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 ||||||||||||| |||||| | || |||||||||||||| || |||||||||||||||| Sbjct: 262 ttgagaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatg 321 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||| | |||||||||||||| ||||||||||| |||||| | || ||||||||||||| Sbjct: 322 tcaagttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtg 381 Query: 182 ccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaa 241 | |||||||||||||||||||| ||||||||||||||||| |||||||||||||| || | Sbjct: 382 ctaaaactcttggcgagtgggcagggctttgcaagattgattctgagggcaaggcgagga 441 Query: 242 aggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttc 301 |||| || |||||||| || |||||||| ||||||| |||||||| || ||||| || Sbjct: 442 aggtcgtaggctgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctca 501 Query: 302 acatcgtgcaggaatacgtcaagtcgcactag 333 |||| || ||||| || |||||||| |||||| Sbjct: 502 acatagtccaggactatgtcaagtcccactag 533
>dbj|AK059090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B10, full insert sequence Length = 751 Score = 293 bits (148), Expect = 3e-76 Identities = 286/332 (86%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||| ||||||||||| || || ||||| |||||||| || || || || | Sbjct: 205 tgaagaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggcca 264 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 ||||||||||||| |||||| | || |||||||||||||| || |||||||||||||||| Sbjct: 265 ttgagaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatg 324 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||| | |||||||||||||| ||||||||||| |||||| | || ||||||||||||| Sbjct: 325 tcaagttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtg 384 Query: 182 ccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaa 241 | |||||||||||||||||||| ||||||||||||||||| |||||||||||||| || | Sbjct: 385 ctaaaactcttggcgagtgggcagggctttgcaagattgattctgagggcaaggcgagga 444 Query: 242 aggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagattcggagggtcttc 301 |||| || |||||||| || |||||||| ||||||| |||||||| || ||||| || Sbjct: 445 aggtcgtaggctgctcctgcgtcgttgtcaaggacttcggtgaagagtcagagggcctca 504 Query: 302 acatcgtgcaggaatacgtcaagtcgcactag 333 |||| || ||||| || |||||||| |||||| Sbjct: 505 acatagtccaggactatgtcaagtcccactag 536
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 218 bits (110), Expect = 1e-53 Identities = 179/202 (88%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||||||||||||||| ||||| ||||| |||||||| ||||| || || | Sbjct: 2647193 tgaagaagtcaagtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggcca 2647252 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 | |||||||||||||||||| | ||||||||||||||||| |||||||| |||||||||| Sbjct: 2647253 tcgagaagcatgctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatg 2647312 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||| | || ||||| || ||||||||||||||||||||| | || ||||||||||||| Sbjct: 2647313 tcaagttggttaaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtg 2647372 Query: 182 ccaaaactcttggcgagtgggc 203 | || ||||||||||||||||| Sbjct: 2647373 ctaagactcttggcgagtgggc 2647394 Score = 202 bits (102), Expect = 8e-49 Identities = 177/202 (87%) Strand = Plus / Minus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||| ||||||||||| || || ||||| |||||||| || || || || | Sbjct: 7266213 tgaagaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggcca 7266154 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 ||||||||||||| |||||| | || |||||||||||||| || |||||||||||||||| Sbjct: 7266153 ttgagaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatg 7266094 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||| | |||||||||||||| ||||||||||| |||||| | || ||||||||||||| Sbjct: 7266093 tcaagttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtg 7266034 Query: 182 ccaaaactcttggcgagtgggc 203 | |||||||||||||||||||| Sbjct: 7266033 ctaaaactcttggcgagtgggc 7266012 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 207 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 266 ||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| Sbjct: 2648042 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 2648101 Query: 267 tgtgaagg 274 ||| |||| Sbjct: 2648102 tgtcaagg 2648109 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 207 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 266 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 7265747 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 7265688 Query: 267 tgtgaagg 274 ||| |||| Sbjct: 7265687 tgtcaagg 7265680 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 272 aggactatggtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcact 331 |||||||||||||||| || ||||| ||| |||| |||||||| || ||||| ||||||| Sbjct: 2648197 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcact 2648256 Query: 332 ag 333 || Sbjct: 2648257 ag 2648258
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 218 bits (110), Expect = 1e-53 Identities = 179/202 (88%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||||||||||||||| ||||| ||||| |||||||| ||||| || || | Sbjct: 72911 tgaagaagtcaagtgctcatgatgggcttgtgaagggtctccgtgaggctgccaaggcca 72970 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 | |||||||||||||||||| | ||||||||||||||||| |||||||| |||||||||| Sbjct: 72971 tcgagaagcatgctgctcagctttgtgtgcttgctgaggactgcgaccaacctgattatg 73030 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||| | || ||||| || ||||||||||||||||||||| | || ||||||||||||| Sbjct: 73031 tcaagttggttaaggctctgtgtgctgagcacaacgttcaccttgttaccgtgcctagtg 73090 Query: 182 ccaaaactcttggcgagtgggc 203 | || ||||||||||||||||| Sbjct: 73091 ctaagactcttggcgagtgggc 73112 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 207 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 266 ||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| Sbjct: 73760 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 73819 Query: 267 tgtgaagg 274 ||| |||| Sbjct: 73820 tgtcaagg 73827 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 272 aggactatggtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcact 331 |||||||||||||||| || ||||| ||| |||| |||||||| || ||||| ||||||| Sbjct: 73915 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcact 73974 Query: 332 ag 333 || Sbjct: 73975 ag 73976
>ref|XM_477174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2015 Score = 202 bits (102), Expect = 8e-49 Identities = 177/202 (87%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||| ||||||||||| || || ||||| |||||||| || || || || | Sbjct: 1134 tgaagaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggcca 1193 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 ||||||||||||| |||||| | || |||||||||||||| || |||||||||||||||| Sbjct: 1194 ttgagaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatg 1253 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||| | |||||||||||||| ||||||||||| |||||| | || ||||||||||||| Sbjct: 1254 tcaagttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtg 1313 Query: 182 ccaaaactcttggcgagtgggc 203 | |||||||||||||||||||| Sbjct: 1314 ctaaaactcttggcgagtgggc 1335 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 207 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 266 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 267 tgtgaagg 274 ||| |||| Sbjct: 1660 tgtcaagg 1667
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 202 bits (102), Expect = 8e-49 Identities = 177/202 (87%) Strand = Plus / Minus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||| ||||||||||| || || ||||| |||||||| || || || || | Sbjct: 106697 tgaagaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggcca 106638 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 ||||||||||||| |||||| | || |||||||||||||| || |||||||||||||||| Sbjct: 106637 ttgagaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatg 106578 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||| | |||||||||||||| ||||||||||| |||||| | || ||||||||||||| Sbjct: 106577 tcaagttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtg 106518 Query: 182 ccaaaactcttggcgagtgggc 203 | |||||||||||||||||||| Sbjct: 106517 ctaaaactcttggcgagtgggc 106496 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 207 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 266 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 106231 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 106172 Query: 267 tgtgaagg 274 ||| |||| Sbjct: 106171 tgtcaagg 106164
>dbj|AK071026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K20, full insert sequence Length = 2015 Score = 202 bits (102), Expect = 8e-49 Identities = 177/202 (87%) Strand = Plus / Plus Query: 2 tgaagaagtcaagtgctcatgatggccttgtcaagggactccgtgaagctgcaaaagcga 61 ||||||||||||| ||||||||||| || || ||||| |||||||| || || || || | Sbjct: 1134 tgaagaagtcaagcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggcca 1193 Query: 62 ttgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattatg 121 ||||||||||||| |||||| | || |||||||||||||| || |||||||||||||||| Sbjct: 1194 ttgagaagcatgccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatg 1253 Query: 122 tgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagtg 181 | ||| | |||||||||||||| ||||||||||| |||||| | || ||||||||||||| Sbjct: 1254 tcaagttggtcaaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtg 1313 Query: 182 ccaaaactcttggcgagtgggc 203 | |||||||||||||||||||| Sbjct: 1314 ctaaaactcttggcgagtgggc 1335 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 207 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 266 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 267 tgtgaagg 274 ||| |||| Sbjct: 1660 tgtcaagg 1667
>emb|BX819283.1|CNS0A9Q1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZH09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 702 Score = 123 bits (62), Expect = 6e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 61 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 120 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 220 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 279 Query: 121 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 180 ||||||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 280 gtgaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 339 Query: 181 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 240 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 340 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 399 Query: 241 aaggtggtgggctgctcatgtgtcgt 266 ||||| || || ||||||||| |||| Sbjct: 400 aaggttgttggatgctcatgtctcgt 425
>ref|NM_179850.1| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.3 mRNA, complete cds Length = 694 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 61 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 120 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 239 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 298 Query: 121 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 180 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 299 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 358 Query: 181 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 240 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 359 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 418 Query: 241 aaggtggtgggctgctcatgtgtcgt 266 ||||| || || ||||||||| |||| Sbjct: 419 aaggttgttggatgctcatgtctcgt 444
>ref|NM_128766.4| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.1 mRNA, complete cds Length = 759 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 61 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 120 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 121 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 180 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 181 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 240 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 241 aaggtggtgggctgctcatgtgtcgt 266 ||||| || || ||||||||| |||| Sbjct: 457 aaggttgttggatgctcatgtctcgt 482
>ref|NM_179849.2| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.2 mRNA, complete cds Length = 723 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 61 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 120 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 121 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 180 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 181 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 240 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 241 aaggtggtgggctgctcatgtgtcgt 266 ||||| || || ||||||||| |||| Sbjct: 421 aaggttgttggatgctcatgtctcgt 446
>gb|AY133636.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 435 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 61 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 120 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 163 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 222 Query: 121 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 180 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 223 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 282 Query: 181 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 240 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 283 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 342 Query: 241 aaggtggtgggctgctcatgtgtcgt 266 ||||| || || ||||||||| |||| Sbjct: 343 aaggttgttggatgctcatgtctcgt 368
>gb|AY050324.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 696 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 61 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 120 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 121 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 180 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 181 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 240 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 241 aaggtggtgggctgctcatgtgtcgt 266 ||||| || || ||||||||| |||| Sbjct: 421 aaggttgttggatgctcatgtctcgt 446
>gb|AY085161.1| Arabidopsis thaliana clone 13453 mRNA, complete sequence Length = 732 Score = 115 bits (58), Expect = 2e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 61 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 120 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 121 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 180 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 181 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 240 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 241 aaggtggtgggctgctcatgtgtcgt 266 ||||| || || ||||||||| |||| Sbjct: 457 aaggttgttggatgctcatgtctcgt 482
>ref|NM_101461.3| Arabidopsis thaliana structural constituent of ribosome AT1G15930 transcript variant AT1G15930.1 mRNA, complete cds Length = 861 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 94 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 153 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 379 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 438 Query: 154 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 213 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 439 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 498 Query: 214 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 273 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 499 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 558 Query: 274 gact 277 |||| Sbjct: 559 gact 562
>ref|NM_179342.1| Arabidopsis thaliana structural constituent of ribosome AT1G15930 transcript variant AT1G15930.2 mRNA, complete cds Length = 758 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 94 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 153 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 276 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 335 Query: 154 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 213 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 336 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 395 Query: 214 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 273 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 396 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 455 Query: 274 gact 277 |||| Sbjct: 456 gact 459
>gb|AY054130.1| Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 435 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 94 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 153 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 196 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 255 Query: 154 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 213 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 256 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 315 Query: 214 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 273 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 316 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 375 Query: 274 gact 277 |||| Sbjct: 376 gact 379
>gb|AF380626.1|AF380626 Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 692 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 94 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 153 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 276 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 335 Query: 154 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 213 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 336 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 395 Query: 214 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 273 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 396 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 455 Query: 274 gact 277 |||| Sbjct: 456 gact 459
>emb|BX815848.1|CNS0ABMM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 94 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 153 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 252 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 311 Query: 154 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 213 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 312 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 371 Query: 214 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 273 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 372 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 431 Query: 274 gact 277 |||| Sbjct: 432 gact 435
>emb|BX818653.1|CNS0AB7K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 687 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 94 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 153 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 241 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 300 Query: 154 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 213 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 301 gaagtcaggttgctaacagtaccaagtgccaagacccttggcgaatgggctggtctctgc 360 Query: 214 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 273 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 361 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 420 Query: 274 gact 277 |||| Sbjct: 421 gact 424
>gb|AY084613.1| Arabidopsis thaliana clone 11328 mRNA, complete sequence Length = 782 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 94 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 153 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 379 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 438 Query: 154 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 213 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 439 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 498 Query: 214 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 273 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 499 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 558 Query: 274 gact 277 |||| Sbjct: 559 gact 562
>emb|BX813855.1|CNS0AEMV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 635 Score = 93.7 bits (47), Expect = 6e-16 Identities = 140/171 (81%) Strand = Plus / Plus Query: 107 accagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttgg 166 |||||||||||||||| |||||||| ||||| ||||||||||| ||| | || ||| Sbjct: 268 accagcctgattatgtcaagcttgtgaaggctctctgtgctgatcacgaagtcaggttgc 327 Query: 167 tcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctg 226 | || || || |||||||| || |||||||| |||||||| || ||||||||||| |||| Sbjct: 328 taacagttccaagtgccaagacccttggcgaatgggctggtctctgcaagattgattctg 387 Query: 227 agggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggact 277 |||| || || || ||||| || || ||||||||| | ||||| ||||||| Sbjct: 388 agggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaaggact 438
>gb|AF154659.1| Nicotiana tabacum clone PR50 mRNA sequence Length = 708 Score = 91.7 bits (46), Expect = 2e-15 Identities = 229/290 (78%) Strand = Plus / Minus Query: 37 ggactccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgct 96 ||||||| ||||| ||| || | |||||||||||||||||| ||| | |||||||| || Sbjct: 503 ggactccatgaaggtgctaaggtgattgagaagcatgctgcgcagctttgtgtgctagca 444 Query: 97 gaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaac 156 ||||| ||||||||||| || ||||| ||||| ||||| || || |||||||| ||||| Sbjct: 443 gaggactgcgaccagccagactatgtcaagctggtcaaagctctttgtgctgatcacaat 384 Query: 157 gttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaag 216 || ||| | || || || | ||| |||||||||||||| |||||||| | ||||| Sbjct: 383 gtcagtttgattacagttcccaatgcaaaaactcttggcgaatgggctggtttatgcaaa 324 Query: 217 attgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggac 276 ||||| ||||| || || ||||| || || || || || ||||| || |||||||| Sbjct: 323 attgattctgaagggaaagcaaggaaagttgttggttgtggctgtgttgtcgtgaaggat 264 Query: 277 tatggtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtc 326 ||||| ||||| | |||||||| || ||||| ||||| ||||| ||||| Sbjct: 263 tatggggaagagactgagggtctccatatcgtccaggagtacgtgaagtc 214
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 45 tgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattg 104 ||||| |||||||| |||||||||||||||||| ||| | ||||| || ||||| ||||| Sbjct: 44266 tgaaggtgcaaaagtgattgagaagcatgctgcacagctttgtgttctagctgaagattg 44207 Query: 105 cgaccagcctgattatgt 122 ||||| ||||||||||| Sbjct: 44206 tgaccaacctgattatgt 44189
>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence Length = 112428 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 55 aaagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcct 114 |||| ||| |||||||||||||| ||| ||||||| |||||||||||||| ||||| ||| Sbjct: 54505 aaagtgatcgagaagcatgctgcacagctctgtgttcttgctgaggattgtgaccaacct 54446 Query: 115 gatta 119 ||||| Sbjct: 54445 gatta 54441
>gb|AC153003.14| Medicago truncatula clone mth2-96o5, complete sequence Length = 93881 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 85 tgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgt 144 ||||| ||||| || ||||| ||||||||||| ||||| || ||||||||||| || ||| Sbjct: 18467 tgtgttcttgcagaagattgtgaccagcctgactatgttaaacttgtcaaggctctttgt 18408 Query: 145 gctgagcacaa 155 ||||||||||| Sbjct: 18407 gctgagcacaa 18397
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete sequence Length = 103194 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 207 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 266 ||||||||||||||| ||||||||||| ||||| ||||| || || ||||||||| |||| Sbjct: 49936 gctttgcaagattgattctgagggcaatgcaaggaaggttgttggatgctcatgtctcgt 49995 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 61 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 120 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 49702 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 49761 Query: 121 gtgaagcttgt 131 || |||||||| Sbjct: 49762 gtcaagcttgt 49772
>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete sequence Length = 80442 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 94 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctga 149 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 7536 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctga 7591 Score = 40.1 bits (20), Expect = 7.3 Identities = 53/64 (82%) Strand = Plus / Plus Query: 211 tgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtg 270 ||||||||||| |||||||| || || || ||||| || || ||||||||| | ||||| Sbjct: 7774 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 7833 Query: 271 aagg 274 |||| Sbjct: 7834 aagg 7837
>gb|BT012865.1| Lycopersicon esculentum clone 113957F, mRNA sequence Length = 749 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 175 cctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaa 233 |||| |||||| || ||||| || |||||||| || ||||||||||||||||| ||||| Sbjct: 337 cctaatgccaagacacttggtgaatgggctggtctgtgcaagattgactctgaaggcaa 395
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 232 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 274 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 32277172 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 32277214 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 15 tgctcatgatggccttgtcaagggactccgtga 47 ||||||||||| |||||||||||| |||||||| Sbjct: 32274991 tgctcatgatgaccttgtcaagggtctccgtga 32275023 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 160 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 207 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 32276897 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 32276944
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 232 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 274 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 10939 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 10981 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 15 tgctcatgatggccttgtcaagggactccgtga 47 ||||||||||| |||||||||||| |||||||| Sbjct: 8760 tgctcatgatgaccttgtcaagggtctccgtga 8792 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 160 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 207 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 10664 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 10711
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 232 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 274 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 128844 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 128886 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 15 tgctcatgatggccttgtcaagggactccgtga 47 ||||||||||| |||||||||||| |||||||| Sbjct: 126665 tgctcatgatgaccttgtcaagggtctccgtga 126697 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 160 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 207 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 128569 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 128616
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 232 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 274 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 32367682 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 32367724 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 15 tgctcatgatggccttgtcaagggactccgtga 47 ||||||||||| |||||||||||| |||||||| Sbjct: 32365503 tgctcatgatgaccttgtcaagggtctccgtga 32365535 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 160 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 207 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 32367407 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 32367454
>gb|AY245452.1| Dermacentor variabilis 40S ribosomal protein S12 mRNA, complete cds Length = 607 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 190 cttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtg 249 |||||||||||||| || || |||||||| ||| || |||||||| || || ||||| Sbjct: 319 cttggcgagtgggccggcctctgcaagatcgacaaggaaggcaaggcgaggaaagtggtc 378 Query: 250 ggctgctcatgtgtcgttgtgaaggacta 278 |||||| |||||||| ||||||||||| Sbjct: 379 ggctgcagttgtgtcgtggtgaaggacta 407
>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206425 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 218 ttgactctgagggcaaggcaagaaagg 244 |||||||||||| |||||||||||||| Sbjct: 166816 ttgactctgaggccaaggcaagaaagg 166842
>gb|AC155325.5| Mus musculus 10 BAC RP24-86C24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171402 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 218 ttgactctgagggcaaggcaagaaagg 244 |||||||||||| |||||||||||||| Sbjct: 149471 ttgactctgaggccaaggcaagaaagg 149497
>dbj|AK147335.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1014L18 product:Very KIND protein (Fragment), full insert sequence Length = 7300 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 ttgactctgagggcaaggcaag 239 |||||||||||||||||||||| Sbjct: 2626 ttgactctgagggcaaggcaag 2605
>dbj|AK147693.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1108L06 product:Very KIND protein (Fragment), full insert sequence Length = 6954 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 ttgactctgagggcaaggcaag 239 |||||||||||||||||||||| Sbjct: 2279 ttgactctgagggcaaggcaag 2258
>dbj|AK147672.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1106C24 product:Very KIND protein (Fragment), full insert sequence Length = 7026 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 ttgactctgagggcaaggcaag 239 |||||||||||||||||||||| Sbjct: 2352 ttgactctgagggcaaggcaag 2331
>dbj|AK046817.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830014K08 product:Very KIND protein (Fragment) homolog [Mus musculus], full insert sequence Length = 3667 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 ttgactctgagggcaaggcaag 239 |||||||||||||||||||||| Sbjct: 2362 ttgactctgagggcaaggcaag 2341
>ref|NM_177261.3| Mus musculus kinase non-catalytic C-lobe domain (KIND) containing 1 (Kndc1), mRNA Length = 7175 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 ttgactctgagggcaaggcaag 239 |||||||||||||||||||||| Sbjct: 2483 ttgactctgagggcaaggcaag 2462
>gb|AC107822.18| Mus musculus chromosome 7, clone RP23-182C11, complete sequence Length = 220443 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 ttgactctgagggcaaggcaag 239 |||||||||||||||||||||| Sbjct: 125647 ttgactctgagggcaaggcaag 125626
>emb|AJ580324.2|MMU580324 Mus musculus mRNA for Very KIND protein (VKIND gene) Length = 5229 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 ttgactctgagggcaaggcaag 239 |||||||||||||||||||||| Sbjct: 2134 ttgactctgagggcaaggcaag 2113
>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194006 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tgcaaaagcgattgagaagca 71 ||||||||||||||||||||| Sbjct: 81627 tgcaaaagcgattgagaagca 81607
>gb|AC093371.6| Genomic sequence for Mus musculus, clone RP23-36P10, complete sequence Length = 177872 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 caaggcaagaaaggtggtggg 251 ||||||||||||||||||||| Sbjct: 146770 caaggcaagaaaggtggtggg 146790
>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete sequence Length = 315108 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tgcaaaagcgattgagaagca 71 ||||||||||||||||||||| Sbjct: 150268 tgcaaaagcgattgagaagca 150288
>gb|AC130658.36| Mus musculus chromosome 1, clone RP23-309D5, complete sequence Length = 184094 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 gtgggctgggctttgcaaga 217 |||||||||||||||||||| Sbjct: 28659 gtgggctgggctttgcaaga 28678
>gb|AC093819.4| Homo sapiens BAC clone RP11-368D18 from 4, complete sequence Length = 168474 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcatgtctgaaacctgttag 412 |||||||||||||||||||| Sbjct: 126950 tcatgtctgaaacctgttag 126931
>gb|AC126933.3| Mus musculus BAC clone RP24-117M7 from chromosome 1, complete sequence Length = 170885 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 gactctgagggcaaggcaagaaag 243 ||||||||||| |||||||||||| Sbjct: 129232 gactctgaggggaaggcaagaaag 129255
>gb|AC124383.3| Mus musculus BAC clone RP24-411E14 from chromosome 18, complete sequence Length = 175177 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 gagggcaaggcaagaaaggt 245 |||||||||||||||||||| Sbjct: 16688 gagggcaaggcaagaaaggt 16707
>gb|AC024859.1| Caenorhabditis elegans cosmid Y71H2AM, complete sequence Length = 143786 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tatggtgaagattcggaggg 296 |||||||||||||||||||| Sbjct: 21060 tatggtgaagattcggaggg 21079
>emb|AL080314.29|HSDJ60O19 Human DNA sequence from clone RP1-60O19 on chromosome 6q16.2-21 Contains two novel genes (including FLJ22314), complete sequence Length = 161355 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cctagtgccaaaactcttgg 194 |||||||||||||||||||| Sbjct: 73353 cctagtgccaaaactcttgg 73372
>gb|AC165083.2| Mus musculus BAC clone RP23-411I6 from chromosome 18, complete sequence Length = 208109 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 gagggcaaggcaagaaaggt 245 |||||||||||||||||||| Sbjct: 156537 gagggcaaggcaagaaaggt 156556
>gb|AC126751.2| Homo sapiens chromosome 5 clone CTD-2224K20, complete sequence Length = 120658 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 tgaaacctgttagcctatgaacat 423 ||||| |||||||||||||||||| Sbjct: 55332 tgaaaactgttagcctatgaacat 55355
>gb|AC113402.2| Homo sapiens chromosome 5 clone RP11-454P21, complete sequence Length = 90271 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 tgaaacctgttagcctatgaacat 423 ||||| |||||||||||||||||| Sbjct: 64523 tgaaaactgttagcctatgaacat 64546
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gcttgctgaggattgcgacc 109 |||||||||||||||||||| Sbjct: 756170 gcttgctgaggattgcgacc 756151
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 gtgcaggaatacgtcaagtcgcac 330 |||||||| ||||||||||||||| Sbjct: 3718687 gtgcaggactacgtcaagtcgcac 3718664
>ref|NM_065204.2| Caenorhabditis elegans Y71H2AM.10 (Y71H2AM.10) mRNA, complete cds Length = 2739 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tatggtgaagattcggaggg 296 |||||||||||||||||||| Sbjct: 963 tatggtgaagattcggaggg 944
>ref|XM_233076.2| PREDICTED: Rattus norvegicus similar to ribosomal protein S12 (LOC313283), mRNA Length = 424 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aggcactctgtgctgagcac 153 |||||||||||||||||||| Sbjct: 208 aggcactctgtgctgagcac 227
>emb|BX248325.7| Zebrafish DNA sequence from clone CH211-233I11 in linkage group 9, complete sequence Length = 157207 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 435 gttttgttgaatcagagtttcgtt 458 |||||| ||||||||||||||||| Sbjct: 93499 gttttgatgaatcagagtttcgtt 93522
>gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, complete sequence Length = 218935 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 gactctgagggcaaggcaagaaag 243 ||||||||||| |||||||||||| Sbjct: 35225 gactctgaggggaaggcaagaaag 35248
>gb|U94500.1|TNU94500 Tilapia nilotica ribosomal protein S12 mRNA, complete cds Length = 468 Score = 40.1 bits (20), Expect = 7.3 Identities = 74/92 (80%) Strand = Plus / Plus Query: 190 cttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtg 249 ||||| ||||||| ||| || |||||||| ||| |||||| || || | ||||||||| Sbjct: 288 cttggtgagtgggttggtctgtgcaagatcgaccgtgagggtaaaccacgcaaggtggtg 347 Query: 250 ggctgctcatgtgtcgttgtgaaggactatgg 281 |||||| || |||||||| ||||| ||||| Sbjct: 348 ggctgcagctgcgtcgttgttaaggattatgg 379 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,988,039 Number of Sequences: 3902068 Number of extensions: 3988039 Number of successful extensions: 67169 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66946 Number of HSP's gapped (non-prelim): 222 length of query: 538 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 515 effective length of database: 17,143,297,704 effective search space: 8828798317560 effective search space used: 8828798317560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)