ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd3k18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB180740.1| Aegilops speltoides mRNA for WNdr1B-like protein kinase, complete cds Length = 2093 Score = 690 bits (348), Expect = 0.0 Identities = 403/416 (96%), Gaps = 4/416 (0%) Strand = Plus / Plus Query: 255 agatgcttccatccaaggatgcaaattttgttggatacacgtacaagaactttgaaattg 314 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1517 agatgcttccatccaaggatgcaaattttgttgggtacacgtacaagaactttgaaattg 1576 Query: 315 tgaatgacgatgaagttgcagggattgccgagctgaagaaaaagagttccaaatcaaaac 374 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1577 tgaatgacgatgaagttgccgggattgccgagctgaagaaaaagagttccaaatcaaaac 1636 Query: 375 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcatgggagtt 434 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 1637 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcacggcagtt 1696 Query: 435 tcttaaatatgttgccccacaaggagggacaaccttcttctcactcaagcgccccaccag 494 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1697 tcttaaatatgttgccccataaggagggacaaccttcttctcactcaagcgccccaccag 1756 Query: 495 aacaataccaaccttcgacgtaaataggatatgggaggttttaaaaagtaaaccacagaa 554 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1757 aacaataccaacc-tcgacgtaaataggatat-ggaggttttaaaaagtaaaccacagaa 1814 Query: 555 aagtaaaagagaggaaaaacaactgttgccttttggtctttggtgttaccccgtccaact 614 ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| || Sbjct: 1815 aagtaaaagagaggaaaaaaaactgttgccttttggtc-ttggtgttaccccgtccagct 1873 Query: 615 tttgtaaattctaaccgatgcttccttttttagtgaattcgttaaaacaaaatcca 670 ||||||||| ||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 1874 tttgtaaatcctaaccgatgctttc-tttttagtgaattcgttaaaacaaaatcca 1928 Score = 232 bits (117), Expect = 1e-57 Identities = 117/117 (100%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 1461 Query: 63 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 1518
>dbj|AB180741.1| Aegilops tauschii mRNA for WNdr1D-like protein kinase, complete cds Length = 2094 Score = 684 bits (345), Expect = 0.0 Identities = 407/421 (96%), Gaps = 5/421 (1%) Strand = Plus / Plus Query: 255 agatgcttccatccaaggatgcaaattttgttggatacacgtacaagaactttgaaattg 314 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1517 agatgcttccatccaaggatgcaaattttgttggatacacctacaagaactttgaaattg 1576 Query: 315 tgaatgacgatgaagttgcagggattgccgagctgaagaaaaagagttccaaatcaaaac 374 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1577 tgaatgacgatgaagttgccgggattgccgagctgaagaaaaagagttccaaatcaaaac 1636 Query: 375 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcatgggagtt 434 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 1637 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcacggcagtt 1696 Query: 435 tcttaaatatgttgccccacaaggagggacaaccttcttctcactcaagcgccccaccag 494 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1697 tcttaaatatgttgccccataaggagggacaaccttcttctcactcaagcgccccaccag 1756 Query: 495 aacaataccaaccttcgacgtaaataggatatgggaggttttaaaaagtaaaccacagaa 554 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1757 aacaataccaacc-tcgacgtaaataggatat-ggaggttttaaaaagtaaaccacagaa 1814 Query: 555 aagtaaaagagagg-aaaaacaactgttgccttttggtctttggtgttaccccgtccaac 613 |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||| | Sbjct: 1815 aagtaaaagagaggaaaaaaaaactgttgccttttggtc-ttggtgttaccccgtccagc 1873 Query: 614 ttttgtaaattctaaccgatgcttccttttttagtgaattcgttaaaacaaaatccaccc 673 |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1874 ttttgtaaatcctaaccgatgctttc-tttttagtgaattcgttaaaacaaaatccaccc 1932 Query: 674 c 674 | Sbjct: 1933 c 1933 Score = 232 bits (117), Expect = 1e-57 Identities = 117/117 (100%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 1461 Query: 63 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 1518
>dbj|AB179753.1| Triticum aestivum WNdr1D mRNA for protein kinase, complete cds Length = 2094 Score = 684 bits (345), Expect = 0.0 Identities = 407/421 (96%), Gaps = 5/421 (1%) Strand = Plus / Plus Query: 255 agatgcttccatccaaggatgcaaattttgttggatacacgtacaagaactttgaaattg 314 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1517 agatgcttccatccaaggatgcaaattttgttggatacacctacaagaactttgaaattg 1576 Query: 315 tgaatgacgatgaagttgcagggattgccgagctgaagaaaaagagttccaaatcaaaac 374 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1577 tgaatgacgatgaagttgccgggattgccgagctgaagaaaaagagttccaaatcaaaac 1636 Query: 375 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcatgggagtt 434 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 1637 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcacggcagtt 1696 Query: 435 tcttaaatatgttgccccacaaggagggacaaccttcttctcactcaagcgccccaccag 494 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1697 tcttaaatatgttgccccataaggagggacaaccttcttctcactcaagcgccccaccag 1756 Query: 495 aacaataccaaccttcgacgtaaataggatatgggaggttttaaaaagtaaaccacagaa 554 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1757 aacaataccaacc-tcgacgtaaataggatat-ggaggttttaaaaagtaaaccacagaa 1814 Query: 555 aagtaaaagagagg-aaaaacaactgttgccttttggtctttggtgttaccccgtccaac 613 |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||| | Sbjct: 1815 aagtaaaagagaggaaaaaaaaactgttgccttttggtc-ttggtgttaccccgtccagc 1873 Query: 614 ttttgtaaattctaaccgatgcttccttttttagtgaattcgttaaaacaaaatccaccc 673 |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1874 ttttgtaaatcctaaccgatgctttc-tttttagtgaattcgttaaaacaaaatccaccc 1932 Query: 674 c 674 | Sbjct: 1933 c 1933 Score = 232 bits (117), Expect = 1e-57 Identities = 117/117 (100%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 1461 Query: 63 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 1518
>dbj|AB179755.1| Triticum aestivum WNdr1A mRNA for protein kinase, complete cds Length = 2093 Score = 666 bits (336), Expect = 0.0 Identities = 400/416 (96%), Gaps = 4/416 (0%) Strand = Plus / Plus Query: 255 agatgcttccatccaaggatgcaaattttgttggatacacgtacaagaactttgaaattg 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1517 agatgcttccatccaaggatgcaaattttgttggatacacgtacaagaactttgaaattg 1576 Query: 315 tgaatgacgatgaagttgcagggattgccgagctgaagaaaaagagttccaaatcaaaac 374 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1577 tgaatgacgatgaagttgccgggattgccgagctgaagaaaaagagttccaaatcaaaac 1636 Query: 375 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcatgggagtt 434 |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 1637 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcacggcggtt 1696 Query: 435 tcttaaatatgttgccccacaaggagggacaaccttcttctcactcaagcgccccaccag 494 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1697 tcttaaatatgttgccccataaggagggacaaccttcttctcactcaagcgccccaccag 1756 Query: 495 aacaataccaaccttcgacgtaaataggatatgggaggttttaaaaagtaaaccacagaa 554 ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 1757 aacaataccaacc-tcgacgtaaataggatat-ggaggttttgaaaagtaaaccacagaa 1814 Query: 555 aagtaaaagagaggaaaaacaactgttgccttttggtctttggtgttaccccgtccaact 614 ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| || Sbjct: 1815 aagtaaaagagaggaaaaaaaactgttgccttttggtc-ttggtgttaccccgtccagct 1873 Query: 615 tttgtaaattctaaccgatgcttccttttttagtgaattcgttaaaacaaaatcca 670 ||||||||| ||||||||||||| | ||||||||||||| |||||||||| ||||| Sbjct: 1874 tttgtaaatcctaaccgatgctttc-tttttagtgaatttgttaaaacaacatcca 1928 Score = 232 bits (117), Expect = 1e-57 Identities = 117/117 (100%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 1461 Query: 63 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 1518
>dbj|AB180739.1| Triticum baeoticum mRNA for WNdr1A-like protein kinase, complete cds Length = 2093 Score = 660 bits (333), Expect = 0.0 Identities = 402/417 (96%), Gaps = 6/417 (1%) Strand = Plus / Plus Query: 255 agatgcttccatccaaggatgcaaattttgttggatacacgtacaagaactttgaaattg 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1517 agatgcttccatccaaggatgcaaattttgttggatacacgtacaagaactttgaaattg 1576 Query: 315 tgaatgacgatgaagttgcagggattgccgagctgaagaaaaagagttccaaatcaaaac 374 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1577 tgaatgacgatgaagttgccgggattgccgagctgaagaaaaagagttccaaatcaaaac 1636 Query: 375 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcatgggagtt 434 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 1637 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcacggcagtt 1696 Query: 435 tcttaaatatgttgccccacaaggagggacaaccttcttctcactcaagcgccccaccag 494 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1697 tcttaaatatgttgccccataaggagggacaaccttcttctcactcaagcgccccaccag 1756 Query: 495 aacaataccaaccttcgacgtaaataggatatgggaggttttaaaaagtaaaccacagaa 554 ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 1757 aacaataccaacc-tcgacgtaaataggatat-ggaggttttgaaaagtaaaccacagaa 1814 Query: 555 aagtaaaagagaggaaaaacaactgttgccttttggtctttggtg-ttaccccgtccaac 613 ||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| | Sbjct: 1815 aagtaaaagagaggaaaaa-aactgttgccttttggtc-ttggtgtttaccccgtccagc 1872 Query: 614 ttttgtaaattctaaccgatgcttccttttttagtgaattcgttaaaacaaaatcca 670 |||||||||| ||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct: 1873 ttttgtaaatcctaaccgatgctttc-tttttagtgaatttgttaaaacaaaatcca 1928 Score = 232 bits (117), Expect = 1e-57 Identities = 117/117 (100%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 1461 Query: 63 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 1518
>dbj|AB179754.1| Triticum aestivum WNdr1B mRNA for protein kinase, complete cds Length = 2094 Score = 656 bits (331), Expect = 0.0 Identities = 401/418 (95%), Gaps = 6/418 (1%) Strand = Plus / Plus Query: 255 agatgcttccatccaaggatgcaaattttgttggatacacgtacaagaactttgaaattg 314 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1517 agatgcttccatccaaggatgcaaattttgttgggtacacgtacaagaactttgaaattg 1576 Query: 315 tgaatgacgatgaagttgcagggattgccgagctgaagaaaaagagttccaaatcaaaac 374 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 1577 tgaatgacgatgaagttgccgggattgccgagctgaagaaaaagagctccaaatcaaaac 1636 Query: 375 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcatgggagtt 434 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 1637 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcacggcagtt 1696 Query: 435 tcttaaatatgttgccccacaaggagggacaaccttcttctcactcaagcgccccaccag 494 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1697 tcttaaatatgttgccccataaggagggacaaccttcttctcactcaagcgccccaccag 1756 Query: 495 aacaataccaaccttcgacgtaaataggatatgggaggttttaaaaagtaaaccacagaa 554 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1757 aacaataccaacc-tcgacgtaaataggatat-ggaggttttaaaaagtaaaccacagaa 1814 Query: 555 aagtaaaagagagg--aaaaacaactgttgccttttggtctttggtgttaccccgtccaa 612 |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 1815 aagtaaaagagaggaaaaaaaaaactgttgccttttggtc-ttggtgttaccccgtccag 1873 Query: 613 cttttgtaaattctaaccgatgcttccttttttagtgaattcgttaaaacaaaatcca 670 ||||||||||| ||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct: 1874 cttttgtaaatcctaaccgatgctttc-tttttagtgaatttgttaaaacaaaatcca 1930 Score = 232 bits (117), Expect = 1e-57 Identities = 117/117 (100%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 1461 Query: 63 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 1518
>dbj|AK101120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025I17, full insert sequence Length = 2350 Score = 293 bits (148), Expect = 4e-76 Identities = 270/308 (87%), Gaps = 2/308 (0%) Strand = Plus / Plus Query: 255 agatgcttccatccaaggatgcaaattttgttggatacacgtacaagaactttgaaattg 314 |||||||||| |||||||||||||| |||||||| || || || ||||| |||||||||| Sbjct: 1775 agatgcttccgtccaaggatgcaaactttgttggctatacatataagaattttgaaattg 1834 Query: 315 tgaatgacgatgaagttgcagggattgccgagctgaagaaaaagagttccaaatcaaaac 374 | ||||| ||||| |||||||| ||||| ||| ||||||| ||||||||||| ||||| | Sbjct: 1835 taaatgatgatgaggttgcaggaattgctgagttgaagaagaagagttccaagtcaaagc 1894 Query: 375 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcatgggagtt 434 ||||||| ||||||||||| ||||||||||||||||||||||| ||||| || || |||| Sbjct: 1895 ggccaactatcaagacattatttgagagcatggatgaagatgagcctgttcaaggaagtt 1954 Query: 435 tcttaaatatgttgccccacaaggagggacaaccttcttctcactcaagcgccccaccag 494 ||||||||||||||||||| |||||||| |||||||| |||||||| | | ||||||| Sbjct: 1955 tcttaaatatgttgccccataaggaggggcaaccttcatctcactccaccattccaccag 2014 Query: 495 aacaataccaaccttcgacgtaaataggatatgggaggttttaaaaagtaaaccacagaa 554 ||||||||||||| ||||| ||||||||||| ||||||||| ||||||||| |||||| Sbjct: 2015 aacaataccaacc-tcgacataaataggata-aggaggttttcaaaagtaaaacacagat 2072 Query: 555 aagtaaaa 562 || ||||| Sbjct: 2073 aattaaaa 2080 Score = 168 bits (85), Expect = 2e-38 Identities = 109/117 (93%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1660 atgaaagctgctttcataccagaagttaacagcgagttggatactcagaattttgagaaa 1719 Query: 63 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 119 ||||||||||| ||||||||| |||| |||||||||||| | ||||||||||||||| Sbjct: 1720 tttgaggagaccggagcacaaattcaaagttcatctaagtcaggtccatggagaaag 1776 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 604 cccgtccaacttttgtaaattctaaccgatgctt 637 ||||||||| ||||||||||||||||||||||| Sbjct: 2114 cccgtccaagctttgtaaattctaaccgatgctt 2147
>ref|XM_475692.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1671 Score = 268 bits (135), Expect = 2e-68 Identities = 235/267 (88%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 255 agatgcttccatccaaggatgcaaattttgttggatacacgtacaagaactttgaaattg 314 |||||||||| |||||||||||||| |||||||| || || || ||||| |||||||||| Sbjct: 1406 agatgcttccgtccaaggatgcaaactttgttggctatacatataagaattttgaaattg 1465 Query: 315 tgaatgacgatgaagttgcagggattgccgagctgaagaaaaagagttccaaatcaaaac 374 | ||||| ||||| |||||||| ||||| ||| ||||||| ||||||||||| ||||| | Sbjct: 1466 taaatgatgatgaggttgcaggaattgctgagttgaagaagaagagttccaagtcaaagc 1525 Query: 375 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcatgggagtt 434 ||||||| ||||||||||| ||||||||||||||||||||||| ||||| || || |||| Sbjct: 1526 ggccaactatcaagacattatttgagagcatggatgaagatgagcctgttcaaggaagtt 1585 Query: 435 tcttaaatatgttgccccacaaggagggacaaccttcttctcactcaagcgccccaccag 494 ||||||||||||||||||| |||||||| |||||||| |||||||| | | ||||||| Sbjct: 1586 tcttaaatatgttgccccataaggaggggcaaccttcatctcactccaccattccaccag 1645 Query: 495 aacaataccaaccttcgacgtaaatag 521 ||||||||||||| ||||| ||||||| Sbjct: 1646 aacaataccaacc-tcgacataaatag 1671 Score = 168 bits (85), Expect = 2e-38 Identities = 109/117 (93%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1291 atgaaagctgctttcataccagaagttaacagcgagttggatactcagaattttgagaaa 1350 Query: 63 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 119 ||||||||||| ||||||||| |||| |||||||||||| | ||||||||||||||| Sbjct: 1351 tttgaggagaccggagcacaaattcaaagttcatctaagtcaggtccatggagaaag 1407
>gb|AY104378.1| Zea mays PCO098391 mRNA sequence Length = 1699 Score = 246 bits (124), Expect = 8e-62 Identities = 238/274 (86%), Gaps = 4/274 (1%) Strand = Plus / Plus Query: 255 agatgcttccatccaaggatgcaaattttgttggatacacgtacaagaactttgaaattg 314 |||||||||||||||| |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 1206 agatgcttccatccaaagatgcaaactttgttgggtatacgtacaagaactttgaaattg 1265 Query: 315 tgaatgacgatgaagttgcagggattgccgagctgaagaaaaagagttccaaatcaaaac 374 ||||||| |||||||| ||||| ||||| ||| |||||||||||||||||||| |||| | Sbjct: 1266 tgaatgatgatgaagtggcaggaattgcagagttgaagaaaaagagttccaaaccaaagc 1325 Query: 375 ggccaaccatcaagacattgtttgagagcatggatgaagatgaacctgtgcatgggagtt 434 | ||||||||||||||| |||||||||| ||||| | ||| || ||||| || ||||||| Sbjct: 1326 gaccaaccatcaagacaatgtttgagaggatggacggagaggagcctgttcaagggagtt 1385 Query: 435 tcttaaatatgttgccccacaaggagggacaaccttcttctcactcaagcgccccaccag 494 |||||| ||||||||||| |||||| |||||||| || ||||| |||| |||| | Sbjct: 1386 tcttaagtatgttgcccc---cggagggccaaccttcgtcccactccagcgttccacagg 1442 Query: 495 aacaataccaaccttcgacgtaaataggatatgg 528 || |||||||||| ||| |||||||||||||||| Sbjct: 1443 aaaaataccaacc-tcgccgtaaataggatatgg 1475 Score = 121 bits (61), Expect = 3e-24 Identities = 103/117 (88%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 1091 atgaaagctgctttcataccagaagttaatggagagttggatactcagaattttgagaat 1150 Query: 63 tttgaggagactggagcacaagttcagagttcatctaaggcgggtccatggagaaag 119 || ||||||| |||| | ||| |||| |||||||| ||| | || || ||||||||| Sbjct: 1151 ttcgaggagattggaactcaaattcaaagttcatccaagtcaggcccttggagaaag 1207
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 153 bits (77), Expect = 9e-34 Identities = 145/165 (87%), Gaps = 2/165 (1%) Strand = Plus / Minus Query: 398 gagagcatggatgaagatgaacctgtgcatgggagtttcttaaatatgttgccccacaag 457 |||||||||||||||||||| ||||| || || ||||||||||||||||||||||| ||| Sbjct: 74659 gagagcatggatgaagatgagcctgttcaaggaagtttcttaaatatgttgccccataag 74600 Query: 458 gagggacaaccttcttctcactcaagcgccccaccagaacaataccaaccttcgacgtaa 517 ||||| |||||||| |||||||| | | |||||||||||||||||||| ||||| ||| Sbjct: 74599 gaggggcaaccttcatctcactccaccattccaccagaacaataccaacc-tcgacataa 74541 Query: 518 ataggatatgggaggttttaaaaagtaaaccacagaaaagtaaaa 562 |||||||| ||||||||| ||||||||| |||||| || ||||| Sbjct: 74540 ataggata-aggaggttttcaaaagtaaaacacagataattaaaa 74497 Score = 113 bits (57), Expect = 8e-22 Identities = 66/69 (95%) Strand = Plus / Minus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 75807 atgaaagctgctttcataccagaagttaacagcgagttggatactcagaattttgagaaa 75748 Query: 63 tttgaggag 71 ||||||||| Sbjct: 75747 tttgaggag 75739 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 248 tttttccagatgcttccatccaaggatgcaaattttgttggatacacgtacaagaacttt 307 ||||| ||||||||||| |||||||||||||| |||||||| || || || ||||| ||| Sbjct: 75009 tttttgcagatgcttccgtccaaggatgcaaactttgttggctatacatataagaatttt 74950 Query: 308 gaaattgtgaatgacgatgaagttgcagggattg 341 |||||||| ||||| ||||| |||||||| |||| Sbjct: 74949 gaaattgtaaatgatgatgaggttgcaggaattg 74916 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Minus Query: 70 agactggagcacaagttcagagttcatctaaggcgggtccatggagaaaggtatgcctga 129 |||| ||||||||| |||| |||||||||||| | |||||||||||||||||||| ||| Sbjct: 75454 agaccggagcacaaattcaaagttcatctaagtcaggtccatggagaaaggtatgtgtga 75395 Query: 130 attcaacatgaaatgc 145 |||| |||||||||| Sbjct: 75394 cttcaccatgaaatgc 75379 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 348 tgaagaaaaagagttccaaatcaaaacggccaaccatcaagacattgtttg 398 ||||||| ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 74798 tgaagaagaagagttccaagtcaaagcggccaactatcaagacattatttg 74748 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 604 cccgtccaacttttgtaaattctaaccgatgctt 637 ||||||||| ||||||||||||||||||||||| Sbjct: 74463 cccgtccaagctttgtaaattctaaccgatgctt 74430
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 153 bits (77), Expect = 9e-34 Identities = 145/165 (87%), Gaps = 2/165 (1%) Strand = Plus / Minus Query: 398 gagagcatggatgaagatgaacctgtgcatgggagtttcttaaatatgttgccccacaag 457 |||||||||||||||||||| ||||| || || ||||||||||||||||||||||| ||| Sbjct: 25132004 gagagcatggatgaagatgagcctgttcaaggaagtttcttaaatatgttgccccataag 25131945 Query: 458 gagggacaaccttcttctcactcaagcgccccaccagaacaataccaaccttcgacgtaa 517 ||||| |||||||| |||||||| | | |||||||||||||||||||| ||||| ||| Sbjct: 25131944 gaggggcaaccttcatctcactccaccattccaccagaacaataccaacc-tcgacataa 25131886 Query: 518 ataggatatgggaggttttaaaaagtaaaccacagaaaagtaaaa 562 |||||||| ||||||||| ||||||||| |||||| || ||||| Sbjct: 25131885 ataggata-aggaggttttcaaaagtaaaacacagataattaaaa 25131842 Score = 113 bits (57), Expect = 8e-22 Identities = 66/69 (95%) Strand = Plus / Minus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 25133152 atgaaagctgctttcataccagaagttaacagcgagttggatactcagaattttgagaaa 25133093 Query: 63 tttgaggag 71 ||||||||| Sbjct: 25133092 tttgaggag 25133084 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 248 tttttccagatgcttccatccaaggatgcaaattttgttggatacacgtacaagaacttt 307 ||||| ||||||||||| |||||||||||||| |||||||| || || || ||||| ||| Sbjct: 25132354 tttttgcagatgcttccgtccaaggatgcaaactttgttggctatacatataagaatttt 25132295 Query: 308 gaaattgtgaatgacgatgaagttgcagggattg 341 |||||||| ||||| ||||| |||||||| |||| Sbjct: 25132294 gaaattgtaaatgatgatgaggttgcaggaattg 25132261 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Minus Query: 70 agactggagcacaagttcagagttcatctaaggcgggtccatggagaaaggtatgcctga 129 |||| ||||||||| |||| |||||||||||| | |||||||||||||||||||| ||| Sbjct: 25132799 agaccggagcacaaattcaaagttcatctaagtcaggtccatggagaaaggtatgtgtga 25132740 Query: 130 attcaacatgaaatgc 145 |||| |||||||||| Sbjct: 25132739 cttcaccatgaaatgc 25132724 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 348 tgaagaaaaagagttccaaatcaaaacggccaaccatcaagacattgtttg 398 ||||||| ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 25132143 tgaagaagaagagttccaagtcaaagcggccaactatcaagacattatttg 25132093 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 604 cccgtccaacttttgtaaattctaaccgatgctt 637 ||||||||| ||||||||||||||||||||||| Sbjct: 25131808 cccgtccaagctttgtaaattctaaccgatgctt 25131775
>gb|BT013356.1| Lycopersicon esculentum clone 135339R, mRNA sequence Length = 2426 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 ||||||||||| || || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 1660 atgaaagctgcatttattccagaagttaatggcgagttggatactcagaattttgagaag 1719 Query: 63 tttga 67 ||||| Sbjct: 1720 tttga 1724 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 290 tacacgtacaagaactttgaaattgtgaatga 321 ||||| ||||| |||||||| ||||||||||| Sbjct: 1810 tacacttacaaaaactttgagattgtgaatga 1841
>ref|NM_196997.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBa0026O12.14), mRNA Length = 1587 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 278 aattttgttggatacacgtacaagaactttgaaattgtgaatga 321 |||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 1411 aattttgtgggctacacgtacaagaacttcgaacttgtgaatga 1454 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 36 gagttggatactcagaactttgagaaatttga 67 ||||| ||||||||||| |||||||| ||||| Sbjct: 1306 gagttagatactcagaattttgagaagtttga 1337
>emb|Z30329.2|MCPRTKINA M.crystallinum mRNA for protein kinase MK6 Length = 2202 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 278 aattttgttggatacacgtacaagaactttgaaattgtgaatgacgatgaagttgcaggg 337 |||||||| || ||||||||||| || || |||||||| ||||| || ||||| |||| Sbjct: 1578 aattttgtcggctacacgtacaaaaatttcgaaattgtaaatgattatcaagttccaggc 1637 Query: 338 attgccgagctgaagaaaaa 357 ||||| || ||||||||||| Sbjct: 1638 attgctgaactgaagaaaaa 1657 Score = 42.1 bits (21), Expect = 2.3 Identities = 51/61 (83%) Strand = Plus / Plus Query: 7 aagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaatttg 66 ||||||||||||| || || ||||| | ||||| || || |||||||||||||| |||| Sbjct: 1444 aagctgctttcattcctgaggttaacgatgagttagacacgcagaactttgagaagtttg 1503 Query: 67 a 67 | Sbjct: 1504 a 1504
>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 278 aattttgttggatacacgtacaagaactttgaaattgtgaatga 321 |||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 151845 aattttgtgggctacacgtacaagaacttcgaacttgtgaatga 151802 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 36 gagttggatactcagaactttgagaaatttga 67 ||||| ||||||||||| |||||||| ||||| Sbjct: 152274 gagttagatactcagaattttgagaagtttga 152243
>gb|AC078893.10| Oryza sativa chromosome 10 BAC OSJNBb0044B19 genomic sequence, complete sequence Length = 81784 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 278 aattttgttggatacacgtacaagaactttgaaattgtgaatga 321 |||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 27166 aattttgtgggctacacgtacaagaacttcgaacttgtgaatga 27123 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 36 gagttggatactcagaactttgagaaatttga 67 ||||| ||||||||||| |||||||| ||||| Sbjct: 27595 gagttagatactcagaattttgagaagtttga 27564
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 278 aattttgttggatacacgtacaagaactttgaaattgtgaatga 321 |||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 17220434 aattttgtgggctacacgtacaagaacttcgaacttgtgaatga 17220477 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 36 gagttggatactcagaactttgagaaatttga 67 ||||| ||||||||||| |||||||| ||||| Sbjct: 17220005 gagttagatactcagaattttgagaagtttga 17220036
>dbj|AK107522.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-F10, full insert sequence Length = 1423 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 278 aattttgttggatacacgtacaagaactttgaaattgtgaatga 321 |||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 1314 aattttgtgggctacacgtacaagaacttcgaacttgtgaatga 1271
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 278 aattttgttggatacacgtacaagaactttgaaattgtgaatga 321 |||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 17229474 aattttgtgggctacacgtacaagaacttcgaacttgtgaatga 17229517 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 36 gagttggatactcagaactttgagaaatttga 67 ||||| ||||||||||| |||||||| ||||| Sbjct: 17229045 gagttagatactcagaattttgagaagtttga 17229076
>gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosome 9, complete sequence Length = 176549 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 536 taaaaagtaaaccacagaaaagtaaaa 562 ||||||||||||||||||||||||||| Sbjct: 48046 taaaaagtaaaccacagaaaagtaaaa 48020
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 9 gctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaatttgag 68 |||||||| || || || ||||||| ||||||||| || || || ||||||||||||||| Sbjct: 11188409 gctgcttttattcctgaggttaatgacgagttggacacacaaaattttgagaaatttgag 11188468 Query: 69 gag 71 ||| Sbjct: 11188469 gag 11188471
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 9 gctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaatttgag 68 |||||||| || || || ||||||| ||||||||| || || || ||||||||||||||| Sbjct: 11188080 gctgcttttattcctgaggttaatgacgagttggacacacaaaattttgagaaatttgag 11188139 Query: 69 gag 71 ||| Sbjct: 11188140 gag 11188142
>emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 108805 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 9 gctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaatttgag 68 |||||||| || || || ||||||| ||||||||| || || || ||||||||||||||| Sbjct: 68249 gctgcttttattcctgaggttaatgacgagttggacacacaaaattttgagaaatttgag 68190 Query: 69 gag 71 ||| Sbjct: 68189 gag 68187
>gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete sequence Length = 87839 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 248 tttttccagatgcttccatccaaggatgcaaattttgttggatacacgtacaagaacttt 307 ||||| ||||||||| |||| || ||| || |||||||| || || |||||||||||| Sbjct: 67167 tttttgcagatgctttcatctaaagatattaactttgttggctatacatacaagaacttt 67226 Query: 308 gaaattgtgaatga 321 |||||||| ||||| Sbjct: 67227 gaaattgtaaatga 67240 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/65 (83%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 ||||||||||| || || || || || |||| |||||||||||||| || |||||||| Sbjct: 66107 atgaaagctgcatttattcctgaggtcaatgatgagttggatactcaaaattttgagaag 66166 Query: 63 tttga 67 ||||| Sbjct: 66167 tttga 66171
>ref|NM_179049.1| Arabidopsis thaliana ATP binding / protein kinase AT4G14350 transcript variant AT4G14350.2 mRNA, complete cds Length = 2423 Score = 50.1 bits (25), Expect = 0.010 Identities = 61/73 (83%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 ||||||||||| || || || ||||||||| |||||||| || || || ||||||||| Sbjct: 1689 atgaaagctgcctttattccccaagttaatgatgagttggacacccaaaattttgagaaa 1748 Query: 63 tttgaggagactg 75 ||||| ||||||| Sbjct: 1749 tttgaagagactg 1761
>ref|NM_117512.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase AT4G14350 transcript variant AT4G14350.1 mRNA, complete cds Length = 2327 Score = 50.1 bits (25), Expect = 0.010 Identities = 61/73 (83%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 ||||||||||| || || || ||||||||| |||||||| || || || ||||||||| Sbjct: 1593 atgaaagctgcctttattccccaagttaatgatgagttggacacccaaaattttgagaaa 1652 Query: 63 tttgaggagactg 75 ||||| ||||||| Sbjct: 1653 tttgaagagactg 1665
>gb|BT000628.1| Arabidopsis thaliana protein kinase (At4g14350/dl3215c) mRNA, complete cds Length = 1656 Score = 50.1 bits (25), Expect = 0.010 Identities = 61/73 (83%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 ||||||||||| || || || ||||||||| |||||||| || || || ||||||||| Sbjct: 1285 atgaaagctgcctttattccccaagttaatgatgagttggacacccaaaattttgagaaa 1344 Query: 63 tttgaggagactg 75 ||||| ||||||| Sbjct: 1345 tttgaagagactg 1357
>gb|AY128279.1| Arabidopsis thaliana AT4g14350/dl3215c mRNA, complete cds Length = 2422 Score = 50.1 bits (25), Expect = 0.010 Identities = 61/73 (83%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 ||||||||||| || || || ||||||||| |||||||| || || || ||||||||| Sbjct: 1688 atgaaagctgcctttattccccaagttaatgatgagttggacacccaaaattttgagaaa 1747 Query: 63 tttgaggagactg 75 ||||| ||||||| Sbjct: 1748 tttgaagagactg 1760
>dbj|AP004949.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45F11, TM0122, complete sequence Length = 90864 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 290 tacacgtacaagaactttgaaattgtgaatga 321 ||||| ||||||||||||||||| |||||||| Sbjct: 89945 tacacatacaagaactttgaaatcgtgaatga 89976 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 |||||||||||||| || || || || |||| || || |||||||| || |||||||| Sbjct: 79600 atgaaagctgcttttattcctgaggtcaatgatgaattagatactcaaaattttgagaag 79659 Query: 63 tttgaggag 71 ||||||||| Sbjct: 79660 tttgaggag 79668
>ref|NM_119462.2| Arabidopsis thaliana kinase AT4G33080 transcript variant AT4G33080.1 mRNA, complete cds Length = 1560 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 267 ccaaggatgcaaattttgttggatacacgtacaagaactttga 309 |||||||| || ||||||||| ||||| |||||||||||||| Sbjct: 1367 ccaaggatttaagttttgttggctacacatacaagaactttga 1409
>ref|NM_001036703.1| Arabidopsis thaliana kinase AT4G33080 transcript variant AT4G33080.2 mRNA, complete cds Length = 1979 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 267 ccaaggatgcaaattttgttggatacacgtacaagaactttga 309 |||||||| || ||||||||| ||||| |||||||||||||| Sbjct: 1746 ccaaggatttaagttttgttggctacacatacaagaactttga 1788
>gb|BT008882.1| Arabidopsis thaliana At4g33080 mRNA, complete cds Length = 1560 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 267 ccaaggatgcaaattttgttggatacacgtacaagaactttga 309 |||||||| || ||||||||| ||||| |||||||||||||| Sbjct: 1367 ccaaggatttaagttttgttggctacacatacaagaactttga 1409
>emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 78 Length = 198669 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 267 ccaaggatgcaaattttgttggatacacgtacaagaactttga 309 |||||||| || ||||||||| ||||| |||||||||||||| Sbjct: 185501 ccaaggatttaagttttgttggctacacatacaagaactttga 185543
>emb|AL035525.1|ATF4I10 Arabidopsis thaliana DNA chromosome 4, BAC clone F4I10 (ESSA project) Length = 111876 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 267 ccaaggatgcaaattttgttggatacacgtacaagaactttga 309 |||||||| || ||||||||| ||||| |||||||||||||| Sbjct: 38040 ccaaggatttaagttttgttggctacacatacaagaactttga 38082
>gb|AC104042.5| Homo sapiens chromosome 11, clone CTD-2119L1, complete sequence Length = 109477 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 543 taaaccacagaaaagtaaaagag 565 ||||||||||||||||||||||| Sbjct: 53134 taaaccacagaaaagtaaaagag 53156
>gb|BT002500.1| Arabidopsis thaliana putative protein kinase (At4g33080) mRNA, complete cds Length = 2106 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 267 ccaaggatgcaaattttgttggatacacgtacaagaactttga 309 |||||||| || ||||||||| ||||| |||||||||||||| Sbjct: 1499 ccaaggatttaagttttgttggctacacatacaagaactttga 1541
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome Length = 1838554 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 agctgctttcataccagaagttaat 32 ||||||||||||||| ||||||||| Sbjct: 1473540 agctgctttcatacccgaagttaat 1473564
>gb|AE006605.1| Streptococcus pyogenes M1 GAS, section 134 of 167 of the complete genome Length = 11167 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 agctgctttcataccagaagttaat 32 ||||||||||||||| ||||||||| Sbjct: 9931 agctgctttcatacccgaagttaat 9955
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 agctgctttcataccagaagttaat 32 ||||||||||||||| ||||||||| Sbjct: 1681939 agctgctttcatacccgaagttaat 1681963
>emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 in linkage group 3, complete sequence Length = 194437 Score = 42.1 bits (21), Expect = 2.3 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 147 gcatgcatgtgtttgc-aacgtgcatttg 174 |||||||||||||||| |||||||||||| Sbjct: 26528 gcatgcatgtgtttgcgaacgtgcatttg 26500
>gb|AC146747.7| Medicago truncatula clone mth2-14h5, complete sequence Length = 129204 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 553 aaaagtaaaagagaggaaaaa 573 ||||||||||||||||||||| Sbjct: 86894 aaaagtaaaagagaggaaaaa 86874
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 agctgctttcataccagaagttaat 32 ||||||||||||||| ||||||||| Sbjct: 1502341 agctgctttcatacccgaagttaat 1502365
>emb|BX248386.35| Zebrafish DNA sequence from clone CH211-231M12, complete sequence Length = 148681 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 ttccatccaaggatgcaaatt 281 ||||||||||||||||||||| Sbjct: 91309 ttccatccaaggatgcaaatt 91329
>emb|AL356967.23| Human DNA sequence from clone RP11-427E4 on chromosome 6 Contains a novel pseudogene, complete sequence Length = 163869 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 548 cacagaaaagtaaaagagagg 568 ||||||||||||||||||||| Sbjct: 150575 cacagaaaagtaaaagagagg 150595
>emb|AL139340.12| Human DNA sequence from clone RP11-7F3 on chromosome 10, complete sequence Length = 187316 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 ttgtgaatgacgatgaagttg 332 ||||||||||||||||||||| Sbjct: 172543 ttgtgaatgacgatgaagttg 172523
>gb|AC139206.5| Mus musculus chromosome 1, clone RP23-82P18, complete sequence Length = 304494 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 taaaccacagaaaagtaaaag 563 ||||||||||||||||||||| Sbjct: 232755 taaaccacagaaaagtaaaag 232775
>gb|AE014268.1| Streptococcus agalactiae 2603V/R section 78 of 100 of the complete genome Length = 20872 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 agctgctttcataccagaagttaat 32 ||||||||||||||| ||||||||| Sbjct: 6297 agctgctttcatacccgaagttaat 6321
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/65 (83%) Strand = Plus / Minus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 ||||||||||| || || || ||||||||| |||||||| || || || ||||||||| Sbjct: 15685 atgaaagctgcctttattccccaagttaatgatgagttggacacccaaaattttgagaaa 15626 Query: 63 tttga 67 ||||| Sbjct: 15625 tttga 15621
>emb|AL766852.1|SAG766852 Streptococcus agalactiae NEM316 complete genome, segment 10 Length = 174050 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 agctgctttcataccagaagttaat 32 ||||||||||||||| ||||||||| Sbjct: 157426 agctgctttcatacccgaagttaat 157450
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/65 (83%) Strand = Plus / Minus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 ||||||||||| || || || ||||||||| |||||||| || || || ||||||||| Sbjct: 155125 atgaaagctgcctttattccccaagttaatgatgagttggacacccaaaattttgagaaa 155066 Query: 63 tttga 67 ||||| Sbjct: 155065 tttga 155061
>emb|BX322552.6| Zebrafish DNA sequence from clone DKEY-62E6 in linkage group 6, complete sequence Length = 230846 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 atgcttccatccaaggatgcaaatt 281 |||||||||||||| |||||||||| Sbjct: 74611 atgcttccatccaaagatgcaaatt 74635
>gb|AC090799.2| Homo sapiens chromosome 11, clone RP11-242N18, complete sequence Length = 155803 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 533 ttttaaaaagtaaaccacagaaaag 557 |||||||||| |||||||||||||| Sbjct: 10897 ttttaaaaagaaaaccacagaaaag 10873
>gb|AC021749.6| Homo sapiens chromosome 11, clone RP11-810F22, complete sequence Length = 193997 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 533 ttttaaaaagtaaaccacagaaaag 557 |||||||||| |||||||||||||| Sbjct: 184118 ttttaaaaagaaaaccacagaaaag 184094
>emb|CR624294.1| full-length cDNA clone CS0DF011YJ20 of Fetal brain of Homo sapiens (human) Length = 1741 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 556 agtaaaagagaggaaaaacaa 576 ||||||||||||||||||||| Sbjct: 1702 agtaaaagagaggaaaaacaa 1722
>gb|AC079262.28| Homo sapiens 12 BAC RP11-560H17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 208686 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 aaaccacagaaaagtaaaaga 564 ||||||||||||||||||||| Sbjct: 52455 aaaccacagaaaagtaaaaga 52435
>gb|AC079317.25| Homo sapiens 12 BAC RP11-4K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147862 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 aaaccacagaaaagtaaaaga 564 ||||||||||||||||||||| Sbjct: 41918 aaaccacagaaaagtaaaaga 41898
>gb|AC104066.3| Homo sapiens BAC clone RP11-177B4 from 4, complete sequence Length = 128474 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 556 agtaaaagagaggaaaaacaa 576 ||||||||||||||||||||| Sbjct: 30416 agtaaaagagaggaaaaacaa 30436
>gb|AF322857.1|AF322857 Danio rerio transcription factor Stat3 (stat3) gene, exons 13 through 24 and partial cds Length = 44033 Score = 42.1 bits (21), Expect = 2.3 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 147 gcatgcatgtgtttgc-aacgtgcatttg 174 |||||||||||||||| |||||||||||| Sbjct: 1073 gcatgcatgtgtttgcgaacgtgcatttg 1101
>emb|BX004814.8| Zebrafish DNA sequence from clone CH211-103I6 in linkage group 1, complete sequence Length = 171710 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 atgcttccatccaaggatgcaaatt 281 |||||||||||||| |||||||||| Sbjct: 43889 atgcttccatccaaagatgcaaatt 43913
>emb|BX537168.4| Zebrafish DNA sequence from clone DKEY-105O6 in linkage group 4, complete sequence Length = 200744 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 atgcttccatccaaggatgcaaatt 281 |||||||||||||| |||||||||| Sbjct: 183533 atgcttccatccaaagatgcaaatt 183557
>gb|AC002563.1|AC002563 Human PAC clone 127H14 from 12q, complete sequence Length = 136436 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 aaaccacagaaaagtaaaaga 564 ||||||||||||||||||||| Sbjct: 103751 aaaccacagaaaagtaaaaga 103731
>dbj|AB115547.1| Lotus japonicus mRNA for Ser/Thr protein kinase, complete cds, clone:LNZ001 Length = 2151 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/65 (83%) Strand = Plus / Plus Query: 3 atgaaagctgctttcataccagaagttaatggcgagttggatactcagaactttgagaaa 62 |||||||||||||| ||||| || || |||| || || |||||||| || |||||||| Sbjct: 1419 atgaaagctgcttttatacctgaggtcaatgatgaattagatactcaaaattttgagaag 1478 Query: 63 tttga 67 ||||| Sbjct: 1479 tttga 1483
>ref|NM_100273.1| Arabidopsis thaliana kinase AT1G03920 mRNA, complete cds Length = 2005 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 277 aaattttgttggatacacgtacaagaactttgaaat 312 ||||||||| || ||||| ||||| ||||||||||| Sbjct: 1625 aaattttgtcggctacacatacaaaaactttgaaat 1660
>ref|NM_001029909.1| Rattus norvegicus CPG2 protein (CPG2), mRNA Length = 27681 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaggagactggagcacaag 84 |||||||||||||||||||| Sbjct: 26306 tgaggagactggagcacaag 26325
>gb|BC054456.1| Mus musculus synaptic nuclear envelope 1, mRNA (cDNA clone MGC:62825 IMAGE:6492523), complete cds Length = 3459 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaggagactggagcacaag 84 |||||||||||||||||||| Sbjct: 1784 tgaggagactggagcacaag 1803
>gb|AC147049.2| Pan troglodytes BAC clone RP43-131M1 from 3, complete sequence Length = 185806 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 aaaagtaaaagagaggaaaa 572 |||||||||||||||||||| Sbjct: 72265 aaaagtaaaagagaggaaaa 72246
>gb|AC161829.5| Mus musculus 10 BAC RP23-304K21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196522 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaggagactggagcacaag 84 |||||||||||||||||||| Sbjct: 182193 tgaggagactggagcacaag 182212
>gb|AC131740.3| Mus musculus BAC clone RP23-85D12 from chromosome 2, complete sequence Length = 158830 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 agaaatttgaggagactgga 77 |||||||||||||||||||| Sbjct: 44940 agaaatttgaggagactgga 44959
>ref|XM_533783.2| PREDICTED: Canis familiaris similar to Rho guanine nucleotide exchange factor 3 (Exchange factor found in platelets and leukemic and neuronal tissues) (XPLN) (LOC476579), mRNA Length = 3117 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 cagatgcttccatccaagga 273 |||||||||||||||||||| Sbjct: 1468 cagatgcttccatccaagga 1487
>gb|AC133182.3| Mus musculus BAC clone RP24-181H19 from chromosome 18, complete sequence Length = 163378 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 agctgctttcataccagaag 27 |||||||||||||||||||| Sbjct: 7385 agctgctttcataccagaag 7404
>gb|AC073275.8| Homo sapiens BAC clone RP11-651K8 from 7, complete sequence Length = 111873 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 aaaagtaaaagagaggaaaa 572 |||||||||||||||||||| Sbjct: 39491 aaaagtaaaagagaggaaaa 39510
>emb|AL445932.12| Human DNA sequence from clone RP11-533L1 on chromosome 6 Contains the 5' end of a novel gene, complete sequence Length = 163650 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 553 aaaagtaaaagagaggaaaaacaa 576 ||||| |||||||||||||||||| Sbjct: 76837 aaaagaaaaagagaggaaaaacaa 76814
>gb|AC125790.2| Homo sapiens chromosome 5 clone CTD-2263N8, complete sequence Length = 106412 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 246 tgtttttccagatgcttccatccaagga 273 |||||||||||||| |||||||||||| Sbjct: 52850 tgtttttccagatggctccatccaagga 52877
>emb|AL109947.19|HSJ919F19 Human DNA sequence from clone RP5-919F19 on chromosome 6q16.3-22.1 Contains the PPIL6 gene for peptidylprolyl isomerase (cyclophilin)-like 6 protein, the SMPD2 gene for sphingomyelin phosphodiesterase 2 neutral membrane (neutral sphingomyelinase), the MICAL1 gene for microtubule associated monoxygenase, calponin and LIM domain containing 1, the ZNF450 gene for zinc finger protein 450 and three CpG islands, complete sequence Length = 128960 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 agatgaacctgtgcatgggagttt 435 ||||||||||||| |||||||||| Sbjct: 51187 agatgaacctgtgtatgggagttt 51164
>emb|Z30330.1|SOPRTKINA S.oleracea mRNA for protein kinase Length = 2355 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 20 accagaagttaatggcgagttggatactcagaactt 55 |||| |||||||||| || |||||||||||||||| Sbjct: 1538 accacaagttaatggggaactggatactcagaactt 1573
>gb|AC125787.2| Homo sapiens chromosome 5 clone CTD-2137I20, complete sequence Length = 117180 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 tgtttttccagatgcttccatccaagga 273 |||||||||||||| |||||||||||| Sbjct: 109076 tgtttttccagatggctccatccaagga 109049
>emb|BX842655.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 10/11 Length = 349965 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tgcttccatccaaggatgca 277 |||||||||||||||||||| Sbjct: 308621 tgcttccatccaaggatgca 308602
>gb|BC036514.1| Homo sapiens microtubule associated monoxygenase, calponin and LIM domain containing 1, mRNA (cDNA clone IMAGE:5269890), complete cds Length = 4132 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 agatgaacctgtgcatgggagttt 435 ||||||||||||| |||||||||| Sbjct: 1337 agatgaacctgtgtatgggagttt 1360
>gb|AC124907.3| Equus caballus clone CH241-409I22, complete sequence Length = 202157 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 549 acagaaaagtaaaagagaggaaaa 572 ||||||||| |||||||||||||| Sbjct: 92867 acagaaaaggaaaagagaggaaaa 92890
>emb|AL672240.13| Mouse DNA sequence from clone RP23-27I16 on chromosome 11, complete sequence Length = 224603 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 aaagtaaaagagaggaaaaa 573 |||||||||||||||||||| Sbjct: 89103 aaagtaaaagagaggaaaaa 89084
>emb|BX649501.24| Zebrafish DNA sequence from clone DKEY-123F20 in linkage group 5, complete sequence Length = 194220 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ttttgtttttccagatgctt 262 |||||||||||||||||||| Sbjct: 19134 ttttgtttttccagatgctt 19115
>emb|BX572627.5| Zebrafish DNA sequence from clone CH211-222M21 in linkage group 9, complete sequence Length = 209758 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 564 agaggaaaaacaactgttgccttt 587 |||||||||||||||| ||||||| Sbjct: 84935 agaggaaaaacaactgatgccttt 84912
>gb|AF452647.1|AF452647 Rattus norvegicus nesprin-1 mRNA, complete cds Length = 9779 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaggagactggagcacaag 84 |||||||||||||||||||| Sbjct: 7666 tgaggagactggagcacaag 7685
>gb|AC046174.6| Homo sapiens chromosome 8, clone RP11-621B3, complete sequence Length = 161619 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 aaaagtaaaccacagaaaag 557 |||||||||||||||||||| Sbjct: 60355 aaaagtaaaccacagaaaag 60374
>gb|AC096317.6| Rattus norvegicus 1 BAC CH230-148F9 (Children's Hospital Oakland Research Institute) complete sequence Length = 211459 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 taaaccacagaaaagtaaaa 562 |||||||||||||||||||| Sbjct: 170945 taaaccacagaaaagtaaaa 170964
>gb|BC041779.1| Mus musculus synaptic nuclear envelope 1, mRNA (cDNA clone IMAGE:4482229), partial cds Length = 3713 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaggagactggagcacaag 84 |||||||||||||||||||| Sbjct: 1381 tgaggagactggagcacaag 1400
>gb|AC156393.12| Mus musculus 10 BAC RP24-315E6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 164936 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaggagactggagcacaag 84 |||||||||||||||||||| Sbjct: 38755 tgaggagactggagcacaag 38774
>gb|AC158639.8| Mus musculus 10 BAC RP24-73H17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199191 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tgaggagactggagcacaag 84 |||||||||||||||||||| Sbjct: 167165 tgaggagactggagcacaag 167146
>emb|BX511132.4| Zebrafish DNA sequence from clone RP71-57D19 in linkage group 3, complete sequence Length = 162087 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gaagaaaaagagttccaaat 368 |||||||||||||||||||| Sbjct: 78552 gaagaaaaagagttccaaat 78571
>dbj|AK036828.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930016I04 product:synaptic nuclear envelope 1, full insert sequence Length = 4152 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaggagactggagcacaag 84 |||||||||||||||||||| Sbjct: 1840 tgaggagactggagcacaag 1859
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 639 cttttttagtgaattcgtta 658 |||||||||||||||||||| Sbjct: 8988195 cttttttagtgaattcgtta 8988176
>gb|AC097370.10| Homo sapiens chromosome 17, clone CTD-2513A7, complete sequence Length = 158207 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 gaacctgtgcatgggagttt 435 |||||||||||||||||||| Sbjct: 131343 gaacctgtgcatgggagttt 131324
>gb|AF281870.1|AF281870 Mus musculus Syne-1B mRNA, partial cds Length = 6226 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaggagactggagcacaag 84 |||||||||||||||||||| Sbjct: 4741 tgaggagactggagcacaag 4760
>gb|AF281869.1|AF281869 Mus musculus Syne-1A mRNA, complete cds Length = 3185 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaggagactggagcacaag 84 |||||||||||||||||||| Sbjct: 1700 tgaggagactggagcacaag 1719
>gb|AY088957.1| Arabidopsis thaliana clone 110932 mRNA, complete sequence Length = 2001 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 277 aaattttgttggatacacgtacaagaactttgaaat 312 ||||||||| || ||||| ||||| ||||||||||| Sbjct: 1621 aaattttgtcggctacacatacaaaaactttgaaat 1656
>emb|BX088561.9| Zebrafish DNA sequence from clone DKEY-257G8 in linkage group 2, complete sequence Length = 190419 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 taaaataataatgcagtggg 199 |||||||||||||||||||| Sbjct: 100588 taaaataataatgcagtggg 100569
>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1178F07 Length = 144454 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 639 cttttttagtgaattcgtta 658 |||||||||||||||||||| Sbjct: 28641 cttttttagtgaattcgtta 28622
>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0060K08 Length = 159626 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 639 cttttttagtgaattcgtta 658 |||||||||||||||||||| Sbjct: 60804 cttttttagtgaattcgtta 60785
>dbj|AK160384.1| Homo sapiens mRNA for FLJ00407 protein Length = 4329 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 agatgaacctgtgcatgggagttt 435 ||||||||||||| |||||||||| Sbjct: 1409 agatgaacctgtgtatgggagttt 1432
>gb|AC113281.15| Mus musculus chromosome 5, clone RP23-393G8, complete sequence Length = 197920 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 actaagattttgtttttccagatg 259 ||||||||||||||||||| |||| Sbjct: 110014 actaagattttgtttttcctgatg 109991
>gb|AC111031.8| Mus musculus chromosome 18, clone RP23-447L21, complete sequence Length = 177570 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 agctgctttcataccagaag 27 |||||||||||||||||||| Sbjct: 96133 agctgctttcataccagaag 96114
>gb|AC106334.8| Rattus norvegicus BAC CH230-185M3 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 206745 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 taaaccacagaaaagtaaaa 562 |||||||||||||||||||| Sbjct: 132384 taaaccacagaaaagtaaaa 132365
>ref|NM_022027.1| Mus musculus synaptic nuclear envelope 1 (Syne1), transcript variant 2, mRNA Length = 3185 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaggagactggagcacaag 84 |||||||||||||||||||| Sbjct: 1700 tgaggagactggagcacaag 1719
>dbj|AP005228.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-119P12, complete sequence Length = 186978 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 agtaaaagagaggaaaaaca 575 |||||||||||||||||||| Sbjct: 91848 agtaaaagagaggaaaaaca 91829
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 549 acagaaaagtaaaagagaggaaaa 572 ||||||||| |||||||||||||| Sbjct: 601061 acagaaaaggaaaagagaggaaaa 601084
>emb|AL928847.17| Mouse DNA sequence from clone RP24-386K1 on chromosome 2, complete sequence Length = 42866 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 agaaatttgaggagactgga 77 |||||||||||||||||||| Sbjct: 33731 agaaatttgaggagactgga 33750
>gb|AC003027.1| Arabidopsis thaliana chromosome I BAC F21M11 genomic sequence, complete sequence Length = 119914 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 277 aaattttgttggatacacgtacaagaactttgaaat 312 ||||||||| || ||||| ||||| ||||||||||| Sbjct: 53050 aaattttgtcggctacacatacaaaaactttgaaat 53015 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,176,987 Number of Sequences: 3902068 Number of extensions: 9176987 Number of successful extensions: 183942 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 183196 Number of HSP's gapped (non-prelim): 715 length of query: 679 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 656 effective length of database: 17,143,297,704 effective search space: 11246003293824 effective search space used: 11246003293824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
