ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3h20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF239818.1| Zea mays protein kinase CK2 regulatory subunit CK2B3 mRNA, complete cds Length = 1380 Score = 252 bits (127), Expect = 9e-64 Identities = 166/179 (92%) Strand = Plus / Plus Query: 310 tccatccccaagggccgctgctccgaaggggagtcagagtcggacagtgaagcatcagat 369 ||||||||||||||||||||||||||||||||||| || || || ||||||||||| ||| Sbjct: 328 tccatccccaagggccgctgctccgaaggggagtctgattctgatagtgaagcatcggat 387 Query: 370 gttggtggctctgatggagaagatacctcatggatttcatggtattgcaacctaagaggg 429 ||| | ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 388 gttagcggctctgatggagaagacacctcatggatttcatggtattgcaacttaagaggg 447 Query: 430 aatgagttcttctgtgaagtcgatgatgattacattcaagatgacttcaatctttgtgg 488 ||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||| Sbjct: 448 aatgagttcttctgtgaagtcgacgatgattatattcaagacgacttcaacctttgtgg 506 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 175 ggaggggcggggctggaccggaagcgcatcagcgaagcgctcgataagcacctggagaag 234 |||||||| ||||||||||||||||| |||| ||| ||||| |||||||| || |||||| Sbjct: 184 ggaggggctgggctggaccggaagcggatcaacgacgcgctggataagcatctcgagaag 243 Query: 235 gcggccgcgtcgccctccacgtcgagaggctcggcggg 272 |||| ||||||||| ||||||||||| || |||||||| Sbjct: 244 gcggtcgcgtcgccgtccacgtcgagggggtcggcggg 281
>gb|AY104282.1| Zea mays PCO084367 mRNA sequence Length = 1387 Score = 252 bits (127), Expect = 9e-64 Identities = 166/179 (92%) Strand = Plus / Plus Query: 310 tccatccccaagggccgctgctccgaaggggagtcagagtcggacagtgaagcatcagat 369 ||||||||||||||||||||||||||||||||||| || || || ||||||||||| ||| Sbjct: 383 tccatccccaagggccgctgctccgaaggggagtctgattctgatagtgaagcatcggat 442 Query: 370 gttggtggctctgatggagaagatacctcatggatttcatggtattgcaacctaagaggg 429 ||| | ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 443 gttagcggctctgatggagaagacacctcatggatttcatggtattgcaacttaagaggg 502 Query: 430 aatgagttcttctgtgaagtcgatgatgattacattcaagatgacttcaatctttgtgg 488 ||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||| Sbjct: 503 aatgagttcttctgtgaagtcgacgatgattatattcaagacgacttcaacctttgtgg 561 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 175 ggaggggcggggctggaccggaagcgcatcagcgaagcgctcgataagcacctggagaag 234 |||||||| ||||||||||||||||| |||| ||| ||||| |||||||| || |||||| Sbjct: 239 ggaggggctgggctggaccggaagcggatcaacgacgcgctggataagcatctcgagaag 298 Query: 235 gcggccgcgtcgccctccacgtcgagaggctcggcggg 272 |||| ||||||||| ||||||||||| || |||||||| Sbjct: 299 gcggtcgcgtcgccgtccacgtcgagggggtcggcggg 336
>ref|NM_187345.1| Oryza sativa (japonica cultivar-group), mRNA Length = 867 Score = 182 bits (92), Expect = 7e-43 Identities = 164/188 (87%) Strand = Plus / Plus Query: 305 cgtcctccatccccaagggccgctgctccgaaggggagtcagagtcggacagtgaagcat 364 |||| ||||| |||||||| || ||||||||||||||||| || || || |||||||||| Sbjct: 209 cgtcgtccatgcccaagggacggtgctccgaaggggagtctgaatctgatagtgaagcat 268 Query: 365 cagatgttggtggctctgatggagaagatacctcatggatttcatggtattgcaacctaa 424 |||||||| |||| ||||| ||||| ||| |||||||||||||||||| |||| |||| Sbjct: 269 cagatgttagtggttctgacggagaggatcactcatggatttcatggtactgcagtctaa 328 Query: 425 gagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgacttcaatcttt 484 |||||||||| ||||||||||| || ||||||||||| || |||||||||||||| || | Sbjct: 329 gagggaatgaattcttctgtgaggttgatgatgattatatacaagatgacttcaacctct 388 Query: 485 gtgggctt 492 |||||||| Sbjct: 389 gtgggctt 396 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 181 gcggggctggaccggaagcgcatcagcgaagcgctcgataagcacctggagaaggcggcc 240 |||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||| | Sbjct: 52 gcggggctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtc 111 Query: 241 gcg 243 ||| Sbjct: 112 gcg 114 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 234 ggcggccgcgtcgccctccacgtcgagaggctcggcggg 272 |||||||||||||||||| |||||||| || |||||||| Sbjct: 123 ggcggccgcgtcgccctcgacgtcgagggggtcggcggg 161
>gb|AY224528.1| Oryza sativa (japonica cultivar-group) isolate 21042 possible protein kinase CK2 regulatory subunit mRNA, partial cds Length = 735 Score = 182 bits (92), Expect = 7e-43 Identities = 164/188 (87%) Strand = Plus / Plus Query: 305 cgtcctccatccccaagggccgctgctccgaaggggagtcagagtcggacagtgaagcat 364 |||| ||||| |||||||| || ||||||||||||||||| || || || |||||||||| Sbjct: 77 cgtcgtccatgcccaagggacggtgctccgaaggggagtctgaatctgatagtgaagcat 136 Query: 365 cagatgttggtggctctgatggagaagatacctcatggatttcatggtattgcaacctaa 424 |||||||| |||| ||||| ||||| ||| |||||||||||||||||| |||| |||| Sbjct: 137 cagatgttagtggttctgacggagaggatcactcatggatttcatggtactgcagtctaa 196 Query: 425 gagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgacttcaatcttt 484 |||||||||| ||||||||||| || ||||||||||| || |||||||||||||| || | Sbjct: 197 gagggaatgaattcttctgtgaggttgatgatgattatatacaagatgacttcaacctct 256 Query: 485 gtgggctt 492 |||||||| Sbjct: 257 gtgggctt 264
>dbj|AK121850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101L24, full insert sequence Length = 1630 Score = 182 bits (92), Expect = 7e-43 Identities = 164/188 (87%) Strand = Plus / Plus Query: 305 cgtcctccatccccaagggccgctgctccgaaggggagtcagagtcggacagtgaagcat 364 |||| ||||| |||||||| || ||||||||||||||||| || || || |||||||||| Sbjct: 364 cgtcgtccatgcccaagggacggtgctccgaaggggagtctgaatctgatagtgaagcat 423 Query: 365 cagatgttggtggctctgatggagaagatacctcatggatttcatggtattgcaacctaa 424 |||||||| |||| ||||| ||||| ||| |||||||||||||||||| |||| |||| Sbjct: 424 cagatgttagtggttctgacggagaggatcactcatggatttcatggtactgcagtctaa 483 Query: 425 gagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgacttcaatcttt 484 |||||||||| ||||||||||| || ||||||||||| || |||||||||||||| || | Sbjct: 484 gagggaatgaattcttctgtgaggttgatgatgattatatacaagatgacttcaacctct 543 Query: 485 gtgggctt 492 |||||||| Sbjct: 544 gtgggctt 551 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 181 gcggggctggaccggaagcgcatcagcgaagcgctcgataagcacctggagaaggcggcc 240 |||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||| | Sbjct: 207 gcggggctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtc 266 Query: 241 gcg 243 ||| Sbjct: 267 gcg 269 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 234 ggcggccgcgtcgccctccacgtcgagaggctcggcggg 272 |||||||||||||||||| |||||||| || |||||||| Sbjct: 278 ggcggccgcgtcgccctcgacgtcgagggggtcggcggg 316
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 153 bits (77), Expect = 6e-34 Identities = 137/157 (87%) Strand = Plus / Plus Query: 336 aggggagtcagagtcggacagtgaagcatcagatgttggtggctctgatggagaagatac 395 ||||||||| || || || |||||||||||||||||| |||| ||||| ||||| ||| Sbjct: 18467509 aggggagtctgaatctgatagtgaagcatcagatgttagtggttctgacggagaggatca 18467568 Query: 396 ctcatggatttcatggtattgcaacctaagagggaatgagttcttctgtgaagtcgatga 455 |||||||||||||||||| |||| |||||||||||||| ||||||||||| || ||||| Sbjct: 18467569 ctcatggatttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgatga 18467628 Query: 456 tgattacattcaagatgacttcaatctttgtgggctt 492 |||||| || |||||||||||||| || ||||||||| Sbjct: 18467629 tgattatatacaagatgacttcaacctctgtgggctt 18467665 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 181 gcggggctggaccggaagcgcatcagcgaagcgctcgataagcacctggagaaggcggcc 240 |||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||| | Sbjct: 18466017 gcggggctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtc 18466076 Query: 241 gcg 243 ||| Sbjct: 18466077 gcg 18466079 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 234 ggcggccgcgtcgccctccacgtcgagaggctcggcggg 272 |||||||||||||||||| |||||||| || |||||||| Sbjct: 18466088 ggcggccgcgtcgccctcgacgtcgagggggtcggcggg 18466126
>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_B11 Length = 102824 Score = 153 bits (77), Expect = 6e-34 Identities = 137/157 (87%) Strand = Plus / Plus Query: 336 aggggagtcagagtcggacagtgaagcatcagatgttggtggctctgatggagaagatac 395 ||||||||| || || || |||||||||||||||||| |||| ||||| ||||| ||| Sbjct: 59357 aggggagtctgaatctgatagtgaagcatcagatgttagtggttctgacggagaggatca 59416 Query: 396 ctcatggatttcatggtattgcaacctaagagggaatgagttcttctgtgaagtcgatga 455 |||||||||||||||||| |||| |||||||||||||| ||||||||||| || ||||| Sbjct: 59417 ctcatggatttcatggtactgcagtctaagagggaatgaattcttctgtgaggttgatga 59476 Query: 456 tgattacattcaagatgacttcaatctttgtgggctt 492 |||||| || |||||||||||||| || ||||||||| Sbjct: 59477 tgattatatacaagatgacttcaacctctgtgggctt 59513 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 181 gcggggctggaccggaagcgcatcagcgaagcgctcgataagcacctggagaaggcggcc 240 |||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||| | Sbjct: 57865 gcggggctggaccggaagcgaatcagcgacgcgctcgacaagcacctcgagaaggcggtc 57924 Query: 241 gcg 243 ||| Sbjct: 57925 gcg 57927 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 234 ggcggccgcgtcgccctccacgtcgagaggctcggcggg 272 |||||||||||||||||| |||||||| || |||||||| Sbjct: 57936 ggcggccgcgtcgccctcgacgtcgagggggtcggcggg 57974
>ref|NM_124079.2| Arabidopsis thaliana CKB1; protein kinase CK2 regulator AT5G47080 (CKB1) transcript variant AT5G47080.1 mRNA, complete cds Length = 1372 Score = 121 bits (61), Expect = 2e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 355 agtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatggtat 414 ||||||| ||||||||| |||| ||||||||||| || || |||||||| || |||| | Sbjct: 407 agtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttggttt 466 Query: 415 tgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgac 474 || || |||||||| || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 467 tgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagatgac 526 Query: 475 ttcaa 479 ||||| Sbjct: 527 ttcaa 531
>ref|NM_203167.1| Arabidopsis thaliana CKB1; protein kinase CK2 regulator AT5G47080 (CKB1) transcript variant AT5G47080.2 mRNA, complete cds Length = 1562 Score = 121 bits (61), Expect = 2e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 355 agtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatggtat 414 ||||||| ||||||||| |||| ||||||||||| || || |||||||| || |||| | Sbjct: 428 agtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttggttt 487 Query: 415 tgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgac 474 || || |||||||| || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 488 tgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagatgac 547 Query: 475 ttcaa 479 ||||| Sbjct: 548 ttcaa 552
>ref|NM_001036949.1| Arabidopsis thaliana CKB1; protein kinase CK2 regulator AT5G47080 (CKB1) transcript variant AT5G47080.3 mRNA, complete cds Length = 1595 Score = 121 bits (61), Expect = 2e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 355 agtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatggtat 414 ||||||| ||||||||| |||| ||||||||||| || || |||||||| || |||| | Sbjct: 461 agtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttggttt 520 Query: 415 tgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgac 474 || || |||||||| || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 521 tgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagatgac 580 Query: 475 ttcaa 479 ||||| Sbjct: 581 ttcaa 585
>emb|BX832248.1|CNS0A285 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZH08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1837 Score = 121 bits (61), Expect = 2e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 355 agtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatggtat 414 ||||||| ||||||||| |||| ||||||||||| || || |||||||| || |||| | Sbjct: 578 agtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttggttt 637 Query: 415 tgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgac 474 || || |||||||| || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 638 tgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagatgac 697 Query: 475 ttcaa 479 ||||| Sbjct: 698 ttcaa 702
>emb|BX830065.1|CNS0A25O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1408 Score = 121 bits (61), Expect = 2e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 355 agtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatggtat 414 ||||||| |||||||||| || | ||||||||||| || || |||||||| || |||| | Sbjct: 401 agtgaagaatcagatgttagttgttctgatggagaggacacttcatggatatcttggttt 460 Query: 415 tgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgac 474 || || |||||||| || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 461 tgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagatgac 520 Query: 475 ttcaa 479 ||||| Sbjct: 521 ttcaa 525
>dbj|AB025609.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K14A3 Length = 34498 Score = 121 bits (61), Expect = 2e-24 Identities = 109/125 (87%) Strand = Plus / Minus Query: 355 agtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatggtat 414 ||||||| ||||||||| |||| ||||||||||| || || |||||||| || |||| | Sbjct: 8811 agtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttggttt 8752 Query: 415 tgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgac 474 || || |||||||| || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 8751 tgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagatgac 8692 Query: 475 ttcaa 479 ||||| Sbjct: 8691 ttcaa 8687
>gb|L22563.1|ATHCKIB Arabidopsis thaliana casein kinase II beta subunit CKB1 mRNA, complete cds Length = 1285 Score = 121 bits (61), Expect = 2e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 355 agtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatggtat 414 ||||||| ||||||||| |||| ||||||||||| || || |||||||| || |||| | Sbjct: 396 agtgaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttggttt 455 Query: 415 tgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgac 474 || || |||||||| || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 456 tgtaatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagatgac 515 Query: 475 ttcaa 479 ||||| Sbjct: 516 ttcaa 520
>emb|AJ438265.1|NTA438265 Nicotiana tabacum mRNA for protein kinase 2 beta chain (ck2B1 gene) Length = 1528 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 350 cggacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcat 409 |||||||||||| || |||||| |||| |||||||| || ||||| ||||||||||| | Sbjct: 477 cggacagtgaagagtctgatgttagtggttctgatggggatgatacttcatggatttctt 536 Query: 410 ggtattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaag 469 ||| ||| ||||| | || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 537 ggttttgtaacctgcgtggtaatgagttcttctgtgaagttgatgatgattacattcaag 596 Query: 470 atga 473 |||| Sbjct: 597 atga 600
>ref|NM_115889.3| Arabidopsis thaliana CKB3; protein kinase CK2 regulator AT3G60250 (CKB3) mRNA, complete cds Length = 1354 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgacttcaatctt 483 ||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 443 agagggaatgatttcttctgtgaagtcgatgaagattatattcaagatgatttcaatctt 502 Query: 484 tgtgg 488 ||||| Sbjct: 503 tgtgg 507
>emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome 3, BAC clone F27H5 Length = 88548 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgacttcaatctt 483 ||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 46585 agagggaatgatttcttctgtgaagtcgatgaagattatattcaagatgatttcaatctt 46526 Query: 484 tgtgg 488 ||||| Sbjct: 46525 tgtgg 46521
>emb|AJ488194.1|NTA488194 Nicotiana tabacum mRNA for protein kinase Ck2 regulatory subunit 2 (ck2beta2 gene) Length = 1542 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 |||||||||| || |||||| |||| |||||||| |||||||| ||||||||||| ||| Sbjct: 431 gacagtgaagagtctgatgttagtggttctgatggggaagatacatcatggatttcttgg 490 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | ||| ||||| | || ||||||||||| |||||||| ||||| || || ||||||||| Sbjct: 491 ttttgtaacctgcgtggaaatgagttcttttgtgaagttgatgacgaatatattcaagat 550 Query: 472 gacttcaatctttgtgg 488 || || ||||| ||||| Sbjct: 551 gattttaatctctgtgg 567
>gb|BT024908.1| Arabidopsis thaliana At3g60250 mRNA, complete cds Length = 831 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgacttcaatctt 483 ||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 292 agagggaatgatttcttctgtgaagtcgatgaagattatattcaagatgatttcaatctt 351 Query: 484 tgtgg 488 ||||| Sbjct: 352 tgtgg 356
>gb|AF263518.1|AF263518 Arabidopsis thaliana protein synthesis initiation factor 4G (EIF4G) gene, complete cds Length = 10989 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgacttcaatctt 483 ||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 9476 agagggaatgatttcttctgtgaagtcgatgaagattatattcaagatgatttcaatctt 9417 Query: 484 tgtgg 488 ||||| Sbjct: 9416 tgtgg 9412
>gb|AF068318.1|AF068318 Arabidopsis thaliana regulatory subunit of protein kinase CK2 (CKB3) mRNA, complete cds Length = 1080 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgacttcaatctt 483 ||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 433 agagggaatgatttcttctgtgaagtcgatgaagattatattcaagatgatttcaatctt 492 Query: 484 tgtgg 488 ||||| Sbjct: 493 tgtgg 497
>ref|NM_130032.2| Arabidopsis thaliana protein kinase CK2 regulator AT2G44680 transcript variant AT2G44680.1 mRNA, complete cds Length = 1369 Score = 93.7 bits (47), Expect = 5e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 350 cggacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcat 409 |||| ||||||| ||||||||| |||| || || || || |||||||| ||||| |||| Sbjct: 427 cggatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcat 486 Query: 410 ggtattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaag 469 ||| ||| || | |||||||||||||| ||||||||||| ||||| ||||| || |||| Sbjct: 487 ggttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaag 546 Query: 470 atgacttcaatctttgtgg 488 |||| |||||||| ||||| Sbjct: 547 atgatttcaatctctgtgg 565
>ref|NM_180090.1| Arabidopsis thaliana protein kinase CK2 regulator AT2G44680 transcript variant AT2G44680.2 mRNA, complete cds Length = 1392 Score = 93.7 bits (47), Expect = 5e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 350 cggacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcat 409 |||| ||||||| ||||||||| |||| || || || || |||||||| ||||| |||| Sbjct: 427 cggatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcat 486 Query: 410 ggtattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaag 469 ||| ||| || | |||||||||||||| ||||||||||| ||||| ||||| || |||| Sbjct: 487 ggttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaag 546 Query: 470 atgacttcaatctttgtgg 488 |||| |||||||| ||||| Sbjct: 547 atgatttcaatctctgtgg 565
>gb|AY093344.1| Arabidopsis thaliana putative casein kinase II beta subunit (At2g44680) mRNA, complete cds Length = 920 Score = 93.7 bits (47), Expect = 5e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 350 cggacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcat 409 |||| ||||||| ||||||||| |||| || || || || |||||||| ||||| |||| Sbjct: 236 cggatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcat 295 Query: 410 ggtattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaag 469 ||| ||| || | |||||||||||||| ||||||||||| ||||| ||||| || |||| Sbjct: 296 ggttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaag 355 Query: 470 atgacttcaatctttgtgg 488 |||| |||||||| ||||| Sbjct: 356 atgatttcaatctctgtgg 374
>gb|AC003672.3| Arabidopsis thaliana chromosome 2 clone F16B22 map m336, complete sequence Length = 109375 Score = 93.7 bits (47), Expect = 5e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 350 cggacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcat 409 |||| ||||||| ||||||||| |||| || || || || |||||||| ||||| |||| Sbjct: 48346 cggatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcat 48287 Query: 410 ggtattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaag 469 ||| ||| || | |||||||||||||| ||||||||||| ||||| ||||| || |||| Sbjct: 48286 ggttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaag 48227 Query: 470 atgacttcaatctttgtgg 488 |||| |||||||| ||||| Sbjct: 48226 atgatttcaatctctgtgg 48208
>gb|AY062585.1| Arabidopsis thaliana putative casein kinase II beta subunit (At2g44680; F16B22.17) mRNA, complete cds Length = 1300 Score = 93.7 bits (47), Expect = 5e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 350 cggacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcat 409 |||| ||||||| ||||||||| |||| || || || || |||||||| ||||| |||| Sbjct: 427 cggatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcat 486 Query: 410 ggtattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaag 469 ||| ||| || | |||||||||||||| ||||||||||| ||||| ||||| || |||| Sbjct: 487 ggttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaag 546 Query: 470 atgacttcaatctttgtgg 488 |||| |||||||| ||||| Sbjct: 547 atgatttcaatctctgtgg 565
>gb|AY060523.1| Arabidopsis thaliana At2g44680/F16B22.17 mRNA, complete cds Length = 849 Score = 93.7 bits (47), Expect = 5e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 350 cggacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcat 409 |||| ||||||| ||||||||| |||| || || || || |||||||| ||||| |||| Sbjct: 236 cggatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcat 295 Query: 410 ggtattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaag 469 ||| ||| || | |||||||||||||| ||||||||||| ||||| ||||| || |||| Sbjct: 296 ggttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaag 355 Query: 470 atgacttcaatctttgtgg 488 |||| |||||||| ||||| Sbjct: 356 atgatttcaatctctgtgg 374
>gb|AY052265.1| Arabidopsis thaliana At2g44680/F16B22.17 mRNA, complete cds Length = 1297 Score = 93.7 bits (47), Expect = 5e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 350 cggacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcat 409 |||| ||||||| ||||||||| |||| || || || || |||||||| ||||| |||| Sbjct: 424 cggatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcat 483 Query: 410 ggtattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaag 469 ||| ||| || | |||||||||||||| ||||||||||| ||||| ||||| || |||| Sbjct: 484 ggttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaag 543 Query: 470 atgacttcaatctttgtgg 488 |||| |||||||| ||||| Sbjct: 544 atgatttcaatctctgtgg 562
>gb|AY088075.1| Arabidopsis thaliana clone 40953 mRNA, complete sequence Length = 1304 Score = 93.7 bits (47), Expect = 5e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 350 cggacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcat 409 |||| ||||||| ||||||||| |||| || || || || |||||||| ||||| |||| Sbjct: 427 cggatagtgaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcat 486 Query: 410 ggtattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaag 469 ||| ||| || | |||||||||||||| ||||||||||| ||||| ||||| || |||| Sbjct: 487 ggttttgtaatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaag 546 Query: 470 atgacttcaatctttgtgg 488 |||| |||||||| ||||| Sbjct: 547 atgatttcaatctctgtgg 565
>ref|NM_117872.2| Arabidopsis thaliana CKB2; protein kinase CK2 regulator AT4G17640 (CKB2) mRNA, complete cds Length = 1374 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 ||||| |||| |||||| || |||| ||||||||||| || ||||| ||||| || ||| Sbjct: 479 gacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttgg 538 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||||||| | ||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 539 ttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggat 598 Query: 472 gactt 476 ||||| Sbjct: 599 gactt 603
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8 Length = 207674 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 ||||| |||| |||||| || |||| ||||||||||| || ||||| ||||| || ||| Sbjct: 190784 gacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttgg 190843 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||||||| | ||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 190844 ttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggat 190903 Query: 472 gactt 476 ||||| Sbjct: 190904 gactt 190908
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46 Length = 198788 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 ||||| |||| |||||| || |||| ||||||||||| || ||||| ||||| || ||| Sbjct: 180149 gacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttgg 180208 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||||||| | ||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 180209 ttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggat 180268 Query: 472 gactt 476 ||||| Sbjct: 180269 gactt 180273
>emb|BX827683.1|CNS0A2YU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZB06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1166 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 ||||| |||| |||||| || |||| ||||||||||| || ||||| ||||| || ||| Sbjct: 271 gacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttgg 330 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||||||| | ||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 331 ttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggat 390 Query: 472 gactt 476 ||||| Sbjct: 391 gactt 395
>gb|BT005279.1| Arabidopsis thaliana At4g17640 mRNA, complete cds Length = 849 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 ||||| |||| |||||| || |||| ||||||||||| || ||||| ||||| || ||| Sbjct: 238 gacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttgg 297 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||||||| | ||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 298 ttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggat 357 Query: 472 gactt 476 ||||| Sbjct: 358 gactt 362
>gb|AY085899.1| Arabidopsis thaliana clone 19505 mRNA, complete sequence Length = 1329 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 ||||| |||| |||||| || |||| ||||||||||| || ||||| ||||| || ||| Sbjct: 479 gacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttgg 538 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||||||| | ||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 539 ttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggat 598 Query: 472 gactt 476 ||||| Sbjct: 599 gactt 603
>dbj|AK119067.1| Arabidopsis thaliana At4g17640 mRNA for putative casein kinase II beta chain CKB2, complete cds, clone: RAFL21-41-H19 Length = 1212 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 ||||| |||| |||||| || |||| ||||||||||| || ||||| ||||| || ||| Sbjct: 318 gacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttgg 377 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||||||| | ||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 378 ttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggat 437 Query: 472 gactt 476 ||||| Sbjct: 438 gactt 442
>gb|U03984.1|ATU03984 Arabidopsis thaliana casein kinase II beta subunit CKB2 mRNA, complete cds Length = 1229 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 ||||| |||| |||||| || |||| ||||||||||| || ||||| ||||| || ||| Sbjct: 371 gacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtggatatcttgg 430 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||||||| | ||||| ||||||||||||||||| |||||||||||||| || ||| Sbjct: 431 ttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgattacatccaggat 490 Query: 472 gactt 476 ||||| Sbjct: 491 gactt 495
>emb|BX822193.1|CNS0A6ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1318 Score = 83.8 bits (42), Expect = 5e-13 Identities = 61/66 (92%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgtgaagt-cgatgatgattacattcaagatgacttcaatct 482 ||||||||||| |||||||||||||| |||||| ||||| ||||||||||| |||||||| Sbjct: 444 agagggaatgatttcttctgtgaagttcgatgaagattatattcaagatgatttcaatct 503 Query: 483 ttgtgg 488 |||||| Sbjct: 504 ttgtgg 509
>emb|BX831794.1|CNS0A14B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH2ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1529 Score = 81.8 bits (41), Expect = 2e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 355 agtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatggtat 414 ||||||| ||||||||| || | | ||||||||| || || |||||||| | |||| | Sbjct: 429 agtgaagaatcagatgtgagttgttttgatggagaggagacttcatggatattttggttt 488 Query: 415 tgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagatgac 474 || || |||||||| || |||||||| ||| |||| ||||||||||||||| |||||||| Sbjct: 489 tgtaatctaagaggaaacgagttcttttgttaagttgatgatgattacatttaagatgac 548 Query: 475 ttcaa 479 ||||| Sbjct: 549 ttcaa 553
>gb|AF239816.1| Zea mays protein kinase CK2 regulatory subunit CK2B1 mRNA, complete cds Length = 1310 Score = 79.8 bits (40), Expect = 8e-12 Identities = 115/140 (82%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 ||||| |||| ||||||||| |||| |||||||| |||||||| || |||||||||||| Sbjct: 418 gacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatgg 477 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | || | | ||| || ||||| || |||||||| || |||||||| ||||| |||||| Sbjct: 478 ttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagat 537 Query: 472 gacttcaatctttgtgggct 491 || ||||| || |||||||| Sbjct: 538 gatttcaacctctgtgggct 557
>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence Length = 109548 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Plus Query: 350 cggacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcat 409 |||||||||||| || |||||| |||| || || || || ||||| || ||||| || | Sbjct: 86241 cggacagtgaagagtctgatgttagtggttccgacggtgatgatacatcttggatctcgt 86300 Query: 410 ggtattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaag 469 ||| |||||| | ||||| ||||| ||||| ||||| || || ||||||||||| |||| Sbjct: 86301 ggttttgcaatttgagaggaaatgaattcttttgtgaggttgacgatgattacatccaag 86360 Query: 470 atgacttcaatctttgtgg 488 ||||||||||||| ||||| Sbjct: 86361 atgacttcaatctgtgtgg 86379
>gb|AC183495.1| Brassica oleracea Contig A, complete sequence Length = 356505 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 394 acctcatggatttcatggtattgcaacctaagagggaatgagttcttctgtgaagtcgat 453 ||||||||||| || |||| ||||| || || ||||| ||||||||| |||| || ||| Sbjct: 295420 acctcatggatatcttggttctgcaatcttagggggaacgagttcttcggtgaggttgat 295361 Query: 454 gatgattacattcaagatgacttcaa 479 ||||||||||| |||||||||||||| Sbjct: 295360 gatgattacatccaagatgacttcaa 295335
>ref|NM_197780.1| Oryza sativa (japonica cultivar-group) putative casein kinase II beta subunit (OSJNBa0027P10.8), mRNA Length = 1229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 |||||||||| |||||||| |||| ||||| ||||| || || || |||||||||||| Sbjct: 390 gacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcatgg 449 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||| | | || ||||||||||||||||| ||||||||||||| || || ||| Sbjct: 450 ttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacaggat 509 Query: 472 gacttcaatctttgtgg 488 || ||||| |||||||| Sbjct: 510 gatttcaacctttgtgg 526 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 188 tggaccggaagcgcatcagcgaagcgctcgataagcacctgga 230 |||||||||||||||||| || | |||||| ||||||||||| Sbjct: 211 tggaccggaagcgcatcaaggacgtgctcgagaagcacctgga 253
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 |||||||||| |||||||| |||| ||||| ||||| || || || |||||||||||| Sbjct: 107208 gacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcatgg 107267 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||| | | || ||||||||||||||||| ||||||||||||| || || ||| Sbjct: 107268 ttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacaggat 107327 Query: 472 gacttcaatctttgtgg 488 || ||||| |||||||| Sbjct: 107328 gatttcaacctttgtgg 107344 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 188 tggaccggaagcgcatcagcgaagcgctcgataagcacctgga 230 |||||||||||||||||| || | |||||| ||||||||||| Sbjct: 104300 tggaccggaagcgcatcaaggacgtgctcgagaagcacctgga 104342
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 |||||||||| |||||||| |||| ||||| ||||| || || || |||||||||||| Sbjct: 21792525 gacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcatgg 21792584 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||| | | || ||||||||||||||||| ||||||||||||| || || ||| Sbjct: 21792585 ttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacaggat 21792644 Query: 472 gacttcaatctttgtgg 488 || ||||| |||||||| Sbjct: 21792645 gatttcaacctttgtgg 21792661 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 188 tggaccggaagcgcatcagcgaagcgctcgataagcacctgga 230 |||||||||||||||||| || | |||||| ||||||||||| Sbjct: 21789617 tggaccggaagcgcatcaaggacgtgctcgagaagcacctgga 21789659
>dbj|AK111555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051E04, full insert sequence Length = 1228 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 |||||||||| |||||||| |||| ||||| ||||| || || || |||||||||||| Sbjct: 378 gacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcatgg 437 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||| | | || ||||||||||||||||| ||||||||||||| || || ||| Sbjct: 438 ttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacaggat 497 Query: 472 gacttcaatctttgtgg 488 || ||||| |||||||| Sbjct: 498 gatttcaacctttgtgg 514 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 188 tggaccggaagcgcatcagcgaagcgctcgataagcacctgga 230 |||||||||||||||||| || | |||||| ||||||||||| Sbjct: 202 tggaccggaagcgcatcaaggacgtgctcgagaagcacctgga 244
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 352 gacagtgaagcatcagatgttggtggctctgatggagaagatacctcatggatttcatgg 411 |||||||||| |||||||| |||| ||||| ||||| || || || |||||||||||| Sbjct: 21804188 gacagtgaagattcagatgtcagtggttctgagggagaggacacatcttggatttcatgg 21804247 Query: 412 tattgcaacctaagagggaatgagttcttctgtgaagtcgatgatgattacattcaagat 471 | |||| | | || ||||||||||||||||| ||||||||||||| || || ||| Sbjct: 21804248 ttctgcagtttgcgcggcaatgagttcttctgtgagatcgatgatgattatatacaggat 21804307 Query: 472 gacttcaatctttgtgg 488 || ||||| |||||||| Sbjct: 21804308 gatttcaacctttgtgg 21804324 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 188 tggaccggaagcgcatcagcgaagcgctcgataagcacctgga 230 |||||||||||||||||| || | |||||| ||||||||||| Sbjct: 21801280 tggaccggaagcgcatcaaggacgtgctcgagaagcacctgga 21801322
>gb|DQ413196.1| Acyrthosiphon pisum isolate WHAP0017 putative casein kinase II beta subunit mRNA, complete cds Length = 663 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 425 gagggaatgagttcttctgtgaagtcgatgatgattacattcaaga 470 |||| ||||| || ||||||||||||||||| |||||||||||||| Sbjct: 50 gaggaaatgaatttttctgtgaagtcgatgaagattacattcaaga 95
>gb|BT018447.1| Zea mays clone EL01N0406A01.d mRNA sequence Length = 1140 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 188 tggaccggaagcgcatcagcgaagcgctcgataagcacctggaga 232 |||||||||||||||||| || |||||||| ||||||||||||| Sbjct: 195 tggaccggaagcgcatcaaggacgcgctcgagaagcacctggaga 239
>gb|AF239817.1| Zea mays protein kinase CK2 regulatory subunit CK2B2 mRNA, complete cds Length = 1090 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 188 tggaccggaagcgcatcagcgaagcgctcgataagcacctggaga 232 |||||||||||||||||| || |||||||| ||||||||||||| Sbjct: 120 tggaccggaagcgcatcaaggacgcgctcgagaagcacctggaga 164
>gb|AY106937.1| Zea mays PCO146174 mRNA sequence Length = 1310 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 188 tggaccggaagcgcatcagcgaagcgctcgataagcacctggaga 232 |||||||||||||||||| || |||||||| ||||||||||||| Sbjct: 283 tggaccggaagcgcatcaaggacgcgctcgagaagcacctggaga 327
>gb|AF360544.1| Ciona intestinalis protein kinase Ck2-beta (CK2B) mRNA, complete cds Length = 648 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattca 467 ||||||||||||||||||||||| || || || ||||| ||||| Sbjct: 49 agagggaatgagttcttctgtgaggtggacgaggattatattca 92
>ref|NM_001032419.1| Ciona intestinalis protein kinase Ck2-beta (CK2B), mRNA Length = 939 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattca 467 ||||||||||||||||||||||| || || || ||||| ||||| Sbjct: 115 agagggaatgagttcttctgtgaggtggacgaggattatattca 158
>dbj|AB210337.1| Ciona intestinalis mRNA for casein kinase II b, complete cds, clone: cinc034k20 Length = 939 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattca 467 ||||||||||||||||||||||| || || || ||||| ||||| Sbjct: 115 agagggaatgagttcttctgtgaggtggacgaggattatattca 158
>dbj|AK174866.1| Ciona intestinalis cDNA, clone:cinc034k20, full insert sequence Length = 940 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattca 467 ||||||||||||||||||||||| || || || ||||| ||||| Sbjct: 116 agagggaatgagttcttctgtgaggtggacgaggattatattca 159
>ref|XM_797012.1| PREDICTED: Strongylocentrotus purpuratus similar to casein kinase 2, beta subunit, transcript variant 4 (LOC579320), mRNA Length = 1897 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattcaaga 470 ||||| ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct: 49 agaggaaatgagttcttttgtgaggtggatgaagattacatccaaga 95
>ref|XM_797006.1| PREDICTED: Strongylocentrotus purpuratus similar to casein kinase 2, beta subunit, transcript variant 3 (LOC579320), mRNA Length = 1930 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattcaaga 470 ||||| ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct: 49 agaggaaatgagttcttttgtgaggtggatgaagattacatccaaga 95
>ref|XM_796997.1| PREDICTED: Strongylocentrotus purpuratus similar to casein kinase 2, beta subunit, transcript variant 2 (LOC579320), mRNA Length = 1906 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattcaaga 470 ||||| ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct: 49 agaggaaatgagttcttttgtgaggtggatgaagattacatccaaga 95
>ref|XM_775603.1| PREDICTED: Strongylocentrotus purpuratus similar to casein kinase 2, beta subunit, transcript variant 1 (LOC579320), mRNA Length = 1906 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgtgaagtcgatgatgattacattcaaga 470 ||||| ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct: 49 agaggaaatgagttcttttgtgaggtggatgaagattacatccaaga 95
>gb|AY067139.1| Schmidtea mediterranea clone H.53.6c(T3) unknown mRNA sequence Length = 617 Score = 46.1 bits (23), Expect = 0.11 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 422 taagagggaatgag-ttcttctgtgaagtcgatgatgattacattcaagat 471 |||||||||||||| || || |||||||| ||||| ||||| ||||||||| Sbjct: 91 taagagggaatgagttttttttgtgaagtagatgaagattatattcaagat 141
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 ggccggaggggcggggctggaccgg 195 |||||||| |||||||||||||||| Sbjct: 2898793 ggccggagtggcggggctggaccgg 2898769 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 ggccggaggggcggggctggaccgg 195 |||||||| |||||||||||||||| Sbjct: 2894194 ggccggagtggcggggctggaccgg 2894170 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 ggccggaggggcggggctggaccgg 195 |||||||| |||||||||||||||| Sbjct: 2881796 ggccggagtggcggggctggaccgg 2881772
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cccctcgcctgggctctcgtc 50 ||||||||||||||||||||| Sbjct: 7875215 cccctcgcctgggctctcgtc 7875235
>gb|AC157678.2| Xenopus tropicalis clone ISB1-130B13, complete sequence Length = 143383 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 agagggaatgagttcttctgt 444 ||||||||||||||||||||| Sbjct: 125337 agagggaatgagttcttctgt 125357
>gb|AC018696.4| Homo sapiens BAC clone RP11-575H3 from 2, complete sequence Length = 194995 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 tcgatgatgattacattcaag 469 ||||||||||||||||||||| Sbjct: 191279 tcgatgatgattacattcaag 191259 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 tcgatgatgattacattcaag 469 ||||||||||||||||||||| Sbjct: 184662 tcgatgatgattacattcaag 184642 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 tcgatgatgattacattcaag 469 ||||||||||||||||||||| Sbjct: 178797 tcgatgatgattacattcaag 178777
>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1066G12 Length = 136263 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cccctcgcctgggctctcgtc 50 ||||||||||||||||||||| Sbjct: 70161 cccctcgcctgggctctcgtc 70181
>gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complete sequence Length = 167731 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 cttccctcccgtgctcctccc 32 ||||||||||||||||||||| Sbjct: 36944 cttccctcccgtgctcctccc 36924
>gb|BC039262.1| Homo sapiens cDNA clone IMAGE:5303168 Length = 1875 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cacgtcgagaggctcggcgg 271 |||||||||||||||||||| Sbjct: 1002 cacgtcgagaggctcggcgg 983
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cagatgttggtggctctgat 384 |||||||||||||||||||| Sbjct: 2029863 cagatgttggtggctctgat 2029844
>gb|DQ377805.1|DQ377804S2 Squirrelpox virus 1296/99, partial genome Length = 37108 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 acctggagaaggcggccgcg 243 |||||||||||||||||||| Sbjct: 7453 acctggagaaggcggccgcg 7434
>gb|AY813927.1| Schistosoma japonicum SJCHGC01319 protein mRNA, complete cds Length = 879 Score = 40.1 bits (20), Expect = 6.7 Identities = 62/76 (81%) Strand = Plus / Plus Query: 396 ctcatggatttcatggtattgcaacctaagagggaatgagttcttctgtgaagtcgatga 455 ||||||||| || |||| |||| |||| | || ||||||||||| |||||||| | || Sbjct: 122 ctcatggatatcgtggttttgcggcctacgtggaaatgagttcttttgtgaagtgcaaga 181 Query: 456 tgattacattcaagat 471 || |||||||||||| Sbjct: 182 agactacattcaagat 197
>gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chromosome 7, complete sequence Length = 180545 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ggaggggcggggctggaccg 194 |||||||||||||||||||| Sbjct: 152005 ggaggggcggggctggaccg 151986
>gb|AC073846.6| Homo sapiens BAC clone RP11-622P13 from 7, complete sequence Length = 123004 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ggaggggcggggctggaccg 194 |||||||||||||||||||| Sbjct: 59447 ggaggggcggggctggaccg 59428
>emb|AL162754.2|NMA3Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 3/7 Length = 311321 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cgtcgtcgtcagcggcgaca 152 |||||||||||||||||||| Sbjct: 121249 cgtcgtcgtcagcggcgaca 121230
>gb|AC127701.2| Homo sapiens BAC clone RP11-79F18 from UL, complete sequence Length = 161405 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 tcgatgatgattacattcaa 468 |||||||||||||||||||| Sbjct: 100204 tcgatgatgattacattcaa 100223
>gb|AY102721.1| Petunia x hybrida fertility restorer-like protein (rf-PPR592) gene, complete cds; nuclear gene for mitochondrial product Length = 4016 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 acttcaatctttgtgggctt 492 |||||||||||||||||||| Sbjct: 1019 acttcaatctttgtgggctt 1038
>gb|AC027694.8| Homo sapiens chromosome 17, clone CTD1-2246P4, complete sequence Length = 102202 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 gctccgaaggggagtcagag 348 |||||||||||||||||||| Sbjct: 60379 gctccgaaggggagtcagag 60398
>gb|AC149092.6| Pan troglodytes BAC clone CH251-553I6 from chromosome 7, complete sequence Length = 194702 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 tcgatgatgattacattcaa 468 |||||||||||||||||||| Sbjct: 19648 tcgatgatgattacattcaa 19667
>gb|AC161019.3| Pan troglodytes BAC clone CH251-7O2 from chromosome 7, complete sequence Length = 165769 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 tcgatgatgattacattcaa 468 |||||||||||||||||||| Sbjct: 115842 tcgatgatgattacattcaa 115823
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cgtcgtcgtcagcggcgaca 152 |||||||||||||||||||| Sbjct: 653222 cgtcgtcgtcagcggcgaca 653203
>gb|AC129915.6| Homo sapiens chromosome 8, clone CTD-3212A4, complete sequence Length = 162359 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gctgacgcggcagcagcatt 121 |||||||||||||||||||| Sbjct: 90015 gctgacgcggcagcagcatt 90034
>gb|AC019340.6| Homo sapiens BAC clone RP11-715L17 from 7, complete sequence Length = 190137 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 tcgatgatgattacattcaa 468 |||||||||||||||||||| Sbjct: 73807 tcgatgatgattacattcaa 73788
>ref|NM_175885.3| Homo sapiens hypothetical protein MGC33846 (MGC33846), mRNA Length = 1875 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cacgtcgagaggctcggcgg 271 |||||||||||||||||||| Sbjct: 1002 cacgtcgagaggctcggcgg 983
>emb|BX247944.6| Zebrafish DNA sequence from clone CH211-227L2 in linkage group 24, complete sequence Length = 155665 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 tcagatgttggtggctctga 383 |||||||||||||||||||| Sbjct: 102042 tcagatgttggtggctctga 102023
>emb|AJ338283.1|HSA338283 Homo sapiens genomic sequence surrounding NotI site, clone NB6-643R Length = 831 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cacgtcgagaggctcggcgg 271 |||||||||||||||||||| Sbjct: 403 cacgtcgagaggctcggcgg 384
>gb|AC148935.6| Pan troglodytes BAC clone CH251-485J2 from chromosome 7, complete sequence Length = 215177 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 tcgatgatgattacattcaa 468 |||||||||||||||||||| Sbjct: 31903 tcgatgatgattacattcaa 31922
>dbj|AP002796.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-742N3, complete sequences Length = 93845 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 cacgtcgagaggctcggcgg 271 |||||||||||||||||||| Sbjct: 49971 cacgtcgagaggctcggcgg 49990
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcgtcgtcgtcagcggcgac 151 |||||||||||||||||||| Sbjct: 3172035 tcgtcgtcgtcagcggcgac 3172054 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,335,410 Number of Sequences: 3902068 Number of extensions: 3335410 Number of successful extensions: 66045 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 65211 Number of HSP's gapped (non-prelim): 834 length of query: 492 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 470 effective length of database: 17,147,199,772 effective search space: 8059183892840 effective search space used: 8059183892840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
