ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3j03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependen... 353 1e-94
2gb|BT009245.1| Triticum aestivum clone wlk1.pk0018.d4:fis, full ... 309 2e-81
3gb|AY621539.1| Triticum aestivum glutamine-dependent asparagine ... 101 8e-19
4emb|Y10196.1|HSPEX Homo sapiens PHEX gene 40 2.4
5emb|CR932777.1| Human DNA sequence from clone XX-NCIH2171_7H20, ... 40 2.4
6gb|AC084880.12| Homo sapiens 12 BAC RP11-64B16 (Roswell Park Can... 40 2.4
7gb|AC092755.4| Homo sapiens chromosome 15 clone RP11-361D15 map ... 40 2.4
8gb|AC092754.4| Homo sapiens chromosome 15 clone RP11-112N19 map ... 40 2.4
9gb|U73024.1|U73024 Homo sapiens cosmid clone U54B12 from Xp22.1-... 40 2.4
10gb|AC005344.1| Homo sapiens 12 PAC RPCI1-53O8 (Roswell Park Canc... 40 2.4
11gb|AC153907.1| Mus musculus BAC RP23-205F6 (Roswell Park Cancer... 38 9.6
12gb|BC083261.1| Danio rerio zgc:101738, mRNA (cDNA clone MGC:1017... 38 9.6
13gb|AC116875.10| Mus musculus chromosome 8, clone RP24-426B21, co... 38 9.6
14gb|AF125314.2| Mus musculus chromosome X clones MP1-C03180, MP1-... 38 9.6
15gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP... 38 9.6
16gb|AC147047.2| Mus musculus BAC clone RP23-97D19 from chromosome... 38 9.6
17gb|AC130816.4| Mus musculus BAC clone RP23-52D16 from chromosome... 38 9.6
18emb|BX901910.12| Zebrafish DNA sequence from clone DKEY-14I8 in ... 38 9.6
19gb|AC146048.3| Pan troglodytes BAC clone RP43-44J1 from 7, compl... 38 9.6
20ref|XM_721182.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 38 9.6
21gb|AC123515.2| Oryza sativa (japonica cultivar-group) chromosome... 38 9.6
22emb|BX511066.9| Zebrafish DNA sequence from clone CH211-129P6 in... 38 9.6
23gb|AC158140.9| Mus musculus chromosome 8, clone RP24-267F22, com... 38 9.6
24gb|AC024649.10| Homo sapiens chromosome 8, clone RP11-618N15, co... 38 9.6
25gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete s... 38 9.6
26gb|AC164624.3| Mus musculus 10 BAC RP24-324P5 (Roswell Park Canc... 38 9.6
27gb|AC110810.3| Homo sapiens BAC clone RP11-776E1 from 4, complet... 38 9.6
28ref|NM_001006063.1| Danio rerio zgc:101738 (zgc:101738), mRNA 38 9.6
29dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.6
30dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.6
31gb|AC131904.4| Homo sapiens chromosome 8, clone CTD-2328O16, com... 38 9.6
32dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 38 9.6
33gb|U72560.1|ACU72560 Anodonta couperiana 16S mitochondrial ribos... 38 9.6
34gb|AC153816.4| Mus musculus BAC RP23-8N6 (Roswell Park Cancer I... 38 9.6
35dbj|AK116948.1| Ciona intestinalis cDNA, clone:cits008b19, full ... 38 9.6
36gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 9.6
37gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 9.6
38emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb... 38 9.6
39dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 38 9.6
40emb|AL591946.14| Mouse DNA sequence from clone RP23-290M7 on chr... 38 9.6
41emb|AL772294.6| Mouse DNA sequence from clone RP23-125F4 on chro... 38 9.6 
>gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine
            synthetase 1 mRNA, complete cds
          Length = 1973

 Score =  353 bits (178), Expect = 1e-94
 Identities = 178/178 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggttgcggcacctggtgtcgcaattgagagttgatggtgtcctgtcctgcttgccgtttc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1796 ggttgcggcacctggtgtcgcaattgagagttgatggtgtcctgtcctgcttgccgtttc 1855

                                                                        
Query: 61   tgataagaaataagatgtacctagtcttgccattagagtgatgcagacctaaggttgagt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1856 tgataagaaataagatgtacctagtcttgccattagagtgatgcagacctaaggttgagt 1915

                                                                      
Query: 121  gaagattgtgcattaatgtttctatagttcttatgaaatcagagaccggatgatttct 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1916 gaagattgtgcattaatgtttctatagttcttatgaaatcagagaccggatgatttct 1973
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>gb|BT009245.1| Triticum aestivum clone wlk1.pk0018.d4:fis, full insert mRNA sequence
          Length = 2064

 Score =  309 bits (156), Expect = 2e-81
 Identities = 178/184 (96%), Gaps = 1/184 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggttgcggcacctggtgtcgcaattgagagttgatggtgtcctgtcctgcttgccgtttc 60
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1780 ggttgcggcgcctggtgtcgcaattgagagttgatggtgtcctgtcctgcttgccgtttc 1839

                                                                        
Query: 61   tgataagaaataagatgtacctagtcttgccattagagtgatgcagacctaagg-ttgag 119
            |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||
Sbjct: 1840 tgataagaaataagatgtacctggtcttgccattagagtggtgcagacctaaggtttgag 1899

                                                                        
Query: 120  tgaagattgtgcattaatgtttctatagttcttatgaaatcagagaccggatgatttcta 179
            |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 1900 tgaagattgtgcattaatgtttctattgttcttatgaaatcggagaccggatgatttcta 1959

                
Query: 180  atcc 183
            ||||
Sbjct: 1960 atcc 1963
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>gb|AY621539.1| Triticum aestivum glutamine-dependent asparagine synthetase (ASN1)
            mRNA, complete cds
          Length = 1815

 Score =  101 bits (51), Expect = 8e-19
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                   
Query: 1    ggttgcggcacctggtgtcgcaattgagagttgatggtgtcctgtcctgcttgcc 55
            ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1746 ggttgcggcgcctggtgtcgcaattgagagttgatggtgtcctgtcctgcttgcc 1800
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>emb|Y10196.1|HSPEX Homo sapiens PHEX gene
          Length = 242825

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   gtgcattaatgtttctatag 147
             ||||||||||||||||||||
Sbjct: 22070 gtgcattaatgtttctatag 22051
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>emb|CR932777.1| Human DNA sequence from clone XX-NCIH2171_7H20, complete sequence
          Length = 115459

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   cagacctaaggttgagtgaa 123
             ||||||||||||||||||||
Sbjct: 16570 cagacctaaggttgagtgaa 16589
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>gb|AC084880.12| Homo sapiens 12 BAC RP11-64B16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 110001

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 139   tttctatagttcttatgaaatcag 162
             |||||||||||||||||| |||||
Sbjct: 64641 tttctatagttcttatgagatcag 64664
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>gb|AC092755.4| Homo sapiens chromosome 15 clone RP11-361D15 map 15q22, complete
             sequence
          Length = 187429

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    agagtgatgcagacctaagg 114
             ||||||||||||||||||||
Sbjct: 14184 agagtgatgcagacctaagg 14165
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>gb|AC092754.4| Homo sapiens chromosome 15 clone RP11-112N19 map 15q22, complete sequence
          Length = 173411

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     agagtgatgcagacctaagg 114
              ||||||||||||||||||||
Sbjct: 152386 agagtgatgcagacctaagg 152367
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>gb|U73024.1|U73024 Homo sapiens cosmid clone U54B12 from Xp22.1-22.2, complete sequence
          Length = 38476

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   gtgcattaatgtttctatag 147
             ||||||||||||||||||||
Sbjct: 31707 gtgcattaatgtttctatag 31688
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>gb|AC005344.1| Homo sapiens 12 PAC RPCI1-53O8 (Roswell Park Cancer Institute Human PAC
             library) complete sequence
          Length = 153836

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   cagacctaaggttgagtgaa 123
             ||||||||||||||||||||
Sbjct: 21704 cagacctaaggttgagtgaa 21723
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>gb|AC153907.1| Mus musculus  BAC RP23-205F6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 196286

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 56    gtttctgataagaaataag 74
             |||||||||||||||||||
Sbjct: 47556 gtttctgataagaaataag 47538
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>gb|BC083261.1| Danio rerio zgc:101738, mRNA (cDNA clone MGC:101738 IMAGE:7229053),
           complete cds
          Length = 1509

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 123 agattgtgcattaatgttt 141
           |||||||||||||||||||
Sbjct: 518 agattgtgcattaatgttt 500
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>gb|AC116875.10| Mus musculus chromosome 8, clone RP24-426B21, complete sequence
          Length = 188938

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 72     aagatgtacctagtcttgc 90
              |||||||||||||||||||
Sbjct: 187876 aagatgtacctagtcttgc 187894
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>gb|AF125314.2| Mus musculus chromosome X clones MP1-C03180, MP1-C22301, CT7-374D15,
              proximal part, complete sequence
          Length = 300285

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 72     aagatgtacctagtcttgc 90
              |||||||||||||||||||
Sbjct: 240634 aagatgtacctagtcttgc 240616
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>gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP21-382F2, RP21-118B24,
             Map qA7.1, complete sequences
          Length = 393632

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    aagatgtacctagtcttgc 90
             |||||||||||||||||||
Sbjct: 31662 aagatgtacctagtcttgc 31644
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>gb|AC147047.2| Mus musculus BAC clone RP23-97D19 from chromosome 6, complete sequence
          Length = 239653

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 56     gtttctgataagaaataag 74
              |||||||||||||||||||
Sbjct: 237500 gtttctgataagaaataag 237482
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>gb|AC130816.4| Mus musculus BAC clone RP23-52D16 from chromosome 6, complete sequence
          Length = 111111

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 56    gtttctgataagaaataag 74
             |||||||||||||||||||
Sbjct: 31188 gtttctgataagaaataag 31206
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>emb|BX901910.12| Zebrafish DNA sequence from clone DKEY-14I8 in linkage group 7,
             complete sequence
          Length = 131855

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 123   agattgtgcattaatgttt 141
             |||||||||||||||||||
Sbjct: 12430 agattgtgcattaatgttt 12412
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>gb|AC146048.3| Pan troglodytes BAC clone RP43-44J1 from 7, complete sequence
          Length = 135620

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 56     gtttctgataagaaataag 74
              |||||||||||||||||||
Sbjct: 102693 gtttctgataagaaataag 102711
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>ref|XM_721182.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00684)
            partial mRNA
          Length = 14419

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 131  cattaatgtttctatagtt 149
            |||||||||||||||||||
Sbjct: 5339 cattaatgtttctatagtt 5321
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>gb|AC123515.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0033E08, complete sequence
          Length = 149241

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    ataagaaataagatgtacc 81
             |||||||||||||||||||
Sbjct: 16501 ataagaaataagatgtacc 16519
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>emb|BX511066.9| Zebrafish DNA sequence from clone CH211-129P6 in linkage group 14,
              complete sequence
          Length = 165835

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 129    tgcattaatgtttctatag 147
              |||||||||||||||||||
Sbjct: 110210 tgcattaatgtttctatag 110228
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>gb|AC158140.9| Mus musculus chromosome 8, clone RP24-267F22, complete sequence
          Length = 169796

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 72     aagatgtacctagtcttgc 90
              |||||||||||||||||||
Sbjct: 135478 aagatgtacctagtcttgc 135460
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>gb|AC024649.10| Homo sapiens chromosome 8, clone RP11-618N15, complete sequence
          Length = 148282

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 56    gtttctgataagaaataag 74
             |||||||||||||||||||
Sbjct: 40209 gtttctgataagaaataag 40227
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>gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete sequence
          Length = 119208

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 128   gtgcattaatgtttctata 146
             |||||||||||||||||||
Sbjct: 72981 gtgcattaatgtttctata 72963
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>gb|AC164624.3| Mus musculus 10 BAC RP24-324P5 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 199853

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 139    tttctatagttcttatgaa 157
              |||||||||||||||||||
Sbjct: 186260 tttctatagttcttatgaa 186242
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>gb|AC110810.3| Homo sapiens BAC clone RP11-776E1 from 4, complete sequence
          Length = 24598

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 56    gtttctgataagaaataagatgt 78
             ||||||| |||||||||||||||
Sbjct: 10720 gtttctgttaagaaataagatgt 10742
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>ref|NM_001006063.1| Danio rerio zgc:101738 (zgc:101738), mRNA
          Length = 1509

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 123 agattgtgcattaatgttt 141
           |||||||||||||||||||
Sbjct: 518 agattgtgcattaatgttt 500
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 134     taatgtttctatagttctt 152
               |||||||||||||||||||
Sbjct: 1774697 taatgtttctatagttctt 1774679
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 63      ataagaaataagatgtacc 81
               |||||||||||||||||||
Sbjct: 5680944 ataagaaataagatgtacc 5680962
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>gb|AC131904.4| Homo sapiens chromosome 8, clone CTD-2328O16, complete sequence
          Length = 116803

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 56     gtttctgataagaaataag 74
              |||||||||||||||||||
Sbjct: 101307 gtttctgataagaaataag 101325
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 3       ttgcggcacctggtgtcgc 21
               |||||||||||||||||||
Sbjct: 3061762 ttgcggcacctggtgtcgc 3061744
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>gb|U72560.1|ACU72560 Anodonta couperiana 16S mitochondrial ribosomal RNA,
          mitochondrial gene
          Length = 398

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 72 aagatgtacctagtcttgccatt 94
          ||||||| |||||||||||||||
Sbjct: 90 aagatgttcctagtcttgccatt 68
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>gb|AC153816.4| Mus musculus  BAC RP23-8N6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 217283

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 139   tttctatagttcttatgaa 157
             |||||||||||||||||||
Sbjct: 58084 tttctatagttcttatgaa 58066
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>dbj|AK116948.1| Ciona intestinalis cDNA, clone:cits008b19, full insert sequence
          Length = 1953

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 14   ggtgtcgcaattgagagtt 32
            |||||||||||||||||||
Sbjct: 1863 ggtgtcgcaattgagagtt 1845
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 63      ataagaaataagatgtacc 81
               |||||||||||||||||||
Sbjct: 5747421 ataagaaataagatgtacc 5747439
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 134     taatgtttctatagttctt 152
               |||||||||||||||||||
Sbjct: 1774675 taatgtttctatagttctt 1774657
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>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132026

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 134   taatgtttctatagttctt 152
             |||||||||||||||||||
Sbjct: 65785 taatgtttctatagttctt 65803
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 40      tcctgtcctgcttgccgtt 58
               |||||||||||||||||||
Sbjct: 3952676 tcctgtcctgcttgccgtt 3952658
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>emb|AL591946.14| Mouse DNA sequence from clone RP23-290M7 on chromosome 15, complete
              sequence
          Length = 188892

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 107    acctaaggttgagtgaaga 125
              |||||||||||||||||||
Sbjct: 186398 acctaaggttgagtgaaga 186416
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>emb|AL772294.6| Mouse DNA sequence from clone RP23-125F4 on chromosome X, complete
              sequence
          Length = 144678

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 72     aagatgtacctagtcttgc 90
              |||||||||||||||||||
Sbjct: 108939 aagatgtacctagtcttgc 108921


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,497,416
Number of Sequences: 3902068
Number of extensions: 1497416
Number of successful extensions: 100336
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100126
Number of HSP's gapped (non-prelim): 209
length of query: 193
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 171
effective length of database: 17,147,199,772
effective search space: 2932171161012
effective search space used: 2932171161012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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