ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3i01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476058.1| Oryza sativa (japonica cultivar-group), predic... 266 8e-68
2gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome... 266 8e-68
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 266 8e-68
4dbj|AK071804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 8e-68
5ref|XM_550384.1| Oryza sativa (japonica cultivar-group), mRNA 96 2e-16
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
7dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
8dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
9dbj|AK103147.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
10ref|XM_468174.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
11gb|AY224451.1| Oryza sativa (japonica cultivar-group) isolate 23... 72 2e-09
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
13dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
14dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
15dbj|AK066424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
16gb|AY109133.1| Zea mays PCO130972 mRNA sequence 52 0.002
17gb|AC105216.3| Homo sapiens chromosome 18, clone RP11-382C11, co... 44 0.52
18gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, co... 44 0.52
19emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20... 42 2.1
20emb|AL772265.5| Mouse DNA sequence from clone RP23-2D7 on chromo... 42 2.1
21gb|AC120375.11| Mus musculus chromosome 14, clone RP24-123H11, c... 40 8.2
22gb|U40802.2| Caenorhabditis elegans cosmid ZC477, complete sequence 40 8.2
23gb|AC125539.4| Mus musculus BAC clone RP23-150M18 from 15, compl... 40 8.2
24gb|AC113598.8| Mus musculus chromosome 14, clone RP23-476N23, co... 40 8.2
25gb|AC091523.23| Mus musculus strain C57BL/6J clone rp23-77a8 map... 40 8.2
26gb|AC123571.8| Medicago truncatula clone mth1-14n3, complete seq... 40 8.2
27emb|Z68323.2|HSN13G6 Human DNA sequence from clone LL22NC03-13G6... 40 8.2
28emb|AL442065.11| Human DNA sequence from clone RP11-541M23 on ch... 40 8.2
29gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, comp... 40 8.2
30emb|CR932960.3| Medicago truncatula chromosome 5 clone mth4-7a5,... 40 8.2
31emb|BX511155.25| Zebrafish DNA sequence from clone DKEY-56D18 in... 40 8.2
32emb|BX323573.7| Zebrafish DNA sequence from clone DKEYP-98F5, co... 40 8.2
33dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 40 8.2
34emb|AL954188.10| Zebrafish DNA sequence from clone DKEY-27J17, c... 40 8.2
35gb|AC098584.2| Homo sapiens BAC clone RP11-10L11 from 4, complet... 40 8.2
36emb|BX510327.10| Zebrafish DNA sequence from clone CH211-253J24 ... 40 8.2
37emb|BX072550.6| Zebrafish DNA sequence from clone DKEY-24P1 in l... 40 8.2
38emb|AJ251561.1|ANI251561 Aspergillus nidulans mstA gene for MSTA... 40 8.2
39gb|AC119177.11| Mus musculus chromosome 15, clone RP24-559L16, c... 40 8.2
40dbj|AP001835.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.2 
>ref|XM_476058.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1224

 Score =  266 bits (134), Expect = 8e-68
 Identities = 245/282 (86%)
 Strand = Plus / Plus

                                                                       
Query: 182 gacaactactgcatctaactctcaaagtgctcctctagcaagaagagatgctaatcgtgc 241
           |||| ||||| ||||||||||||| | || |||||||||||||||||||| |||||||| 
Sbjct: 198 gacatctactccatctaactctcagaatggtcctctagcaagaagagatgataatcgtgg 257

                                                                       
Query: 242 tcgtcgacagcaaagtccgttgaattctagttgctggatctccattgagcttgttgtaac 301
           |||||| ||||  ||||| ||||||||| |||||||||||||  ||||||| ||||||| 
Sbjct: 258 tcgtcgtcagcctagtcccttgaattctggttgctggatctcagttgagctagttgtaaa 317

                                                                       
Query: 302 agttagccagattatagcggccatttgtgttctgtcattgtcaaggaaggaacatccaca 361
            ||||||||||| ||||| || ||||||||||||||| | |||||||| || ||||||||
Sbjct: 318 tgttagccagatcatagcagctatttgtgttctgtcagtatcaaggaatgagcatccaca 377

                                                                       
Query: 362 ttctccattgtttgagtgggtcattggttataccgtaggttgtgttgctactcttcctct 421
            ||||| || ||||||||||||||||||||||| |||||||||  ||| || || |||| 
Sbjct: 378 ctctccgttatttgagtgggtcattggttatacagtaggttgtactgccacgctgcctca 437

                                                     
Query: 422 tctctactggcgctatctccatcgcaaccgcccaacaactgg 463
           ||| ||||||||||||||||||||||||| |||||| |||||
Sbjct: 438 tctttactggcgctatctccatcgcaacctcccaaccactgg 479



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                        
Query: 18 gaaacagacaatcaccctttactgatagaccacatggaaaatactg 63
          |||||||| |||  |||||||||   ||||||||||||||||||||
Sbjct: 40 gaaacagataatttccctttacttgcagaccacatggaaaatactg 85
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>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
             complete sequence
          Length = 145070

 Score =  266 bits (134), Expect = 8e-68
 Identities = 245/282 (86%)
 Strand = Plus / Plus

                                                                         
Query: 182   gacaactactgcatctaactctcaaagtgctcctctagcaagaagagatgctaatcgtgc 241
             |||| ||||| ||||||||||||| | || |||||||||||||||||||| |||||||| 
Sbjct: 23921 gacatctactccatctaactctcagaatggtcctctagcaagaagagatgataatcgtgg 23980

                                                                         
Query: 242   tcgtcgacagcaaagtccgttgaattctagttgctggatctccattgagcttgttgtaac 301
             |||||| ||||  ||||| ||||||||| |||||||||||||  ||||||| ||||||| 
Sbjct: 23981 tcgtcgtcagcctagtcccttgaattctggttgctggatctcagttgagctagttgtaaa 24040

                                                                         
Query: 302   agttagccagattatagcggccatttgtgttctgtcattgtcaaggaaggaacatccaca 361
              ||||||||||| ||||| || ||||||||||||||| | |||||||| || ||||||||
Sbjct: 24041 tgttagccagatcatagcagctatttgtgttctgtcagtatcaaggaatgagcatccaca 24100

                                                                         
Query: 362   ttctccattgtttgagtgggtcattggttataccgtaggttgtgttgctactcttcctct 421
              ||||| || ||||||||||||||||||||||| |||||||||  ||| || || |||| 
Sbjct: 24101 ctctccgttatttgagtgggtcattggttatacagtaggttgtactgccacgctgcctca 24160

                                                       
Query: 422   tctctactggcgctatctccatcgcaaccgcccaacaactgg 463
             ||| ||||||||||||||||||||||||| |||||| |||||
Sbjct: 24161 tctttactggcgctatctccatcgcaacctcccaaccactgg 24202



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 18    gaaacagacaatcaccctttactgatagaccacatggaaaatactg 63
             |||||||| |||  |||||||||   ||||||||||||||||||||
Sbjct: 23763 gaaacagataatttccctttacttgcagaccacatggaaaatactg 23808
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  266 bits (134), Expect = 8e-68
 Identities = 245/282 (86%)
 Strand = Plus / Plus

                                                                           
Query: 182     gacaactactgcatctaactctcaaagtgctcctctagcaagaagagatgctaatcgtgc 241
               |||| ||||| ||||||||||||| | || |||||||||||||||||||| |||||||| 
Sbjct: 4654578 gacatctactccatctaactctcagaatggtcctctagcaagaagagatgataatcgtgg 4654637

                                                                           
Query: 242     tcgtcgacagcaaagtccgttgaattctagttgctggatctccattgagcttgttgtaac 301
               |||||| ||||  ||||| ||||||||| |||||||||||||  ||||||| ||||||| 
Sbjct: 4654638 tcgtcgtcagcctagtcccttgaattctggttgctggatctcagttgagctagttgtaaa 4654697

                                                                           
Query: 302     agttagccagattatagcggccatttgtgttctgtcattgtcaaggaaggaacatccaca 361
                ||||||||||| ||||| || ||||||||||||||| | |||||||| || ||||||||
Sbjct: 4654698 tgttagccagatcatagcagctatttgtgttctgtcagtatcaaggaatgagcatccaca 4654757

                                                                           
Query: 362     ttctccattgtttgagtgggtcattggttataccgtaggttgtgttgctactcttcctct 421
                ||||| || ||||||||||||||||||||||| |||||||||  ||| || || |||| 
Sbjct: 4654758 ctctccgttatttgagtgggtcattggttatacagtaggttgtactgccacgctgcctca 4654817

                                                         
Query: 422     tctctactggcgctatctccatcgcaaccgcccaacaactgg 463
               ||| ||||||||||||||||||||||||| |||||| |||||
Sbjct: 4654818 tctttactggcgctatctccatcgcaacctcccaaccactgg 4654859



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                             
Query: 18      gaaacagacaatcaccctttactgatagaccacatggaaaatactg 63
               |||||||| |||  |||||||||   ||||||||||||||||||||
Sbjct: 4654420 gaaacagataatttccctttacttgcagaccacatggaaaatactg 4654465
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>dbj|AK071804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110J02, full
           insert sequence
          Length = 1869

 Score =  266 bits (134), Expect = 8e-68
 Identities = 245/282 (86%)
 Strand = Plus / Plus

                                                                       
Query: 182 gacaactactgcatctaactctcaaagtgctcctctagcaagaagagatgctaatcgtgc 241
           |||| ||||| ||||||||||||| | || |||||||||||||||||||| |||||||| 
Sbjct: 658 gacatctactccatctaactctcagaatggtcctctagcaagaagagatgataatcgtgg 717

                                                                       
Query: 242 tcgtcgacagcaaagtccgttgaattctagttgctggatctccattgagcttgttgtaac 301
           |||||| ||||  ||||| ||||||||| |||||||||||||  ||||||| ||||||| 
Sbjct: 718 tcgtcgtcagcctagtcccttgaattctggttgctggatctcagttgagctagttgtaaa 777

                                                                       
Query: 302 agttagccagattatagcggccatttgtgttctgtcattgtcaaggaaggaacatccaca 361
            ||||||||||| ||||| || ||||||||||||||| | |||||||| || ||||||||
Sbjct: 778 tgttagccagatcatagcagctatttgtgttctgtcagtatcaaggaatgagcatccaca 837

                                                                       
Query: 362 ttctccattgtttgagtgggtcattggttataccgtaggttgtgttgctactcttcctct 421
            ||||| || ||||||||||||||||||||||| |||||||||  ||| || || |||| 
Sbjct: 838 ctctccgttatttgagtgggtcattggttatacagtaggttgtactgccacgctgcctca 897

                                                     
Query: 422 tctctactggcgctatctccatcgcaaccgcccaacaactgg 463
           ||| ||||||||||||||||||||||||| |||||| |||||
Sbjct: 898 tctttactggcgctatctccatcgcaacctcccaaccactgg 939



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 18  gaaacagacaatcaccctttactgatagaccacatggaaaatactg 63
           |||||||| |||  |||||||||   ||||||||||||||||||||
Sbjct: 500 gaaacagataatttccctttacttgcagaccacatggaaaatactg 545
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>ref|XM_550384.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2107

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                       
Query: 261 ttgaattctagttgctggatctccattgagcttgttgtaacagttagccagattatagcg 320
           ||||||||| | | ||||||||| ||||||||| ||||||   | |||||||||||||| 
Sbjct: 570 ttgaattctggcttctggatctcaattgagcttattgtaagtttaagccagattatagca 629

                                                                       
Query: 321 gccatttgtgttctgtcattgtcaaggaaggaacatccacattctccattgtttgagtgg 380
           || |||  ||| |||||| | |||||||| || ||||| ||| |||| |||  | |||||
Sbjct: 630 gctattactgtcctgtcagtatcaaggaacgagcatcctcatgctcctttggctcagtgg 689

                                                   
Query: 381 gtcattggttataccgtaggttgtgttgctactcttcctc 420
            | |||||||||||  ||||||||||||||||||||||||
Sbjct: 690 cttattggttatacgataggttgtgttgctactcttcctc 729
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                           
Query: 261     ttgaattctagttgctggatctccattgagcttgttgtaacagttagccagattatagcg 320
               ||||||||| | | ||||||||| ||||||||| ||||||   | |||||||||||||| 
Sbjct: 4091690 ttgaattctggcttctggatctcaattgagcttattgtaagtttaagccagattatagca 4091749

                                                                           
Query: 321     gccatttgtgttctgtcattgtcaaggaaggaacatccacattctccattgtttgagtgg 380
               || |||  ||| |||||| | |||||||| || ||||| ||| |||| |||  | |||||
Sbjct: 4091750 gctattactgtcctgtcagtatcaaggaacgagcatcctcatgctcctttggctcagtgg 4091809

                                                       
Query: 381     gtcattggttataccgtaggttgtgttgctactcttcctc 420
                | |||||||||||  ||||||||||||||||||||||||
Sbjct: 4091810 cttattggttatacgataggttgtgttgctactcttcctc 4091849
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>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0509B06
          Length = 104515

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                         
Query: 261   ttgaattctagttgctggatctccattgagcttgttgtaacagttagccagattatagcg 320
             ||||||||| | | ||||||||| ||||||||| ||||||   | |||||||||||||| 
Sbjct: 58433 ttgaattctggcttctggatctcaattgagcttattgtaagtttaagccagattatagca 58492

                                                                         
Query: 321   gccatttgtgttctgtcattgtcaaggaaggaacatccacattctccattgtttgagtgg 380
             || |||  ||| |||||| | |||||||| || ||||| ||| |||| |||  | |||||
Sbjct: 58493 gctattactgtcctgtcagtatcaaggaacgagcatcctcatgctcctttggctcagtgg 58552

                                                     
Query: 381   gtcattggttataccgtaggttgtgttgctactcttcctc 420
              | |||||||||||  ||||||||||||||||||||||||
Sbjct: 58553 cttattggttatacgataggttgtgttgctactcttcctc 58592
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>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0406H10
          Length = 156419

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                         
Query: 261   ttgaattctagttgctggatctccattgagcttgttgtaacagttagccagattatagcg 320
             ||||||||| | | ||||||||| ||||||||| ||||||   | |||||||||||||| 
Sbjct: 38661 ttgaattctggcttctggatctcaattgagcttattgtaagtttaagccagattatagca 38720

                                                                         
Query: 321   gccatttgtgttctgtcattgtcaaggaaggaacatccacattctccattgtttgagtgg 380
             || |||  ||| |||||| | |||||||| || ||||| ||| |||| |||  | |||||
Sbjct: 38721 gctattactgtcctgtcagtatcaaggaacgagcatcctcatgctcctttggctcagtgg 38780

                                                     
Query: 381   gtcattggttataccgtaggttgtgttgctactcttcctc 420
              | |||||||||||  ||||||||||||||||||||||||
Sbjct: 38781 cttattggttatacgataggttgtgttgctactcttcctc 38820
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>dbj|AK103147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120I17, full
           insert sequence
          Length = 2106

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                       
Query: 261 ttgaattctagttgctggatctccattgagcttgttgtaacagttagccagattatagcg 320
           ||||||||| | | ||||||||| ||||||||| ||||||   | |||||||||||||| 
Sbjct: 570 ttgaattctggcttctggatctcaattgagcttattgtaagtttaagccagattatagca 629

                                                                       
Query: 321 gccatttgtgttctgtcattgtcaaggaaggaacatccacattctccattgtttgagtgg 380
           || |||  ||| |||||| | |||||||| || ||||| ||| |||| |||  | |||||
Sbjct: 630 gctattactgtcctgtcagtatcaaggaacgagcatcctcatgctcctttggctcagtgg 689

                                                   
Query: 381 gtcattggttataccgtaggttgtgttgctactcttcctc 420
            | |||||||||||  ||||||||||||||||||||||||
Sbjct: 690 cttattggttatacgataggttgtgttgctactcttcctc 729
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>ref|XM_468174.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1384

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                       
Query: 342 tcaaggaaggaacatccacattctccattgtttgagtgggtcattggttataccgtaggt 401
           ||||| ||||||||||| ||  ||||||| |||||||||||||| |||||||| || |||
Sbjct: 448 tcaagaaaggaacatccgcaagctccattatttgagtgggtcataggttatacagttggt 507

                                               
Query: 402 tgtgttgctactcttcctcttctctactggcgctat 437
           ||| ||||||| || || | ||| || |||||||||
Sbjct: 508 tgttttgctacactaccccatctttattggcgctat 543
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>gb|AY224451.1| Oryza sativa (japonica cultivar-group) isolate 23264 putative ATP
           synthetase alpha chain mRNA, complete cds
          Length = 597

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                       
Query: 342 tcaaggaaggaacatccacattctccattgtttgagtgggtcattggttataccgtaggt 401
           ||||| ||||||||||| ||  ||||||| |||||||||||||| |||||||| || |||
Sbjct: 331 tcaagaaaggaacatccgcaagctccattatttgagtgggtcataggttatacagttggt 390

                                               
Query: 402 tgtgttgctactcttcctcttctctactggcgctat 437
           ||| ||||||| || || | ||| || |||||||||
Sbjct: 391 tgttttgctacactaccccatctttattggcgctat 426
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                            
Query: 342      tcaaggaaggaacatccacattctccattgtttgagtgggtcattggttataccgtaggt 401
                ||||| ||||||||||| ||  ||||||| |||||||||||||| |||||||| || |||
Sbjct: 33478208 tcaagaaaggaacatccgcaagctccattatttgagtgggtcataggttatacagttggt 33478267

                                                    
Query: 402      tgtgttgctactcttcctcttctctactggcgctat 437
                ||| ||||||| || || | ||| || |||||||||
Sbjct: 33478268 tgttttgctacactaccccatctttattggcgctat 33478303
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>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0054K20
          Length = 153584

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                         
Query: 342   tcaaggaaggaacatccacattctccattgtttgagtgggtcattggttataccgtaggt 401
             ||||| ||||||||||| ||  ||||||| |||||||||||||| |||||||| || |||
Sbjct: 53083 tcaagaaaggaacatccgcaagctccattatttgagtgggtcataggttatacagttggt 53142

                                                 
Query: 402   tgtgttgctactcttcctcttctctactggcgctat 437
             ||| ||||||| || || | ||| || |||||||||
Sbjct: 53143 tgttttgctacactaccccatctttattggcgctat 53178
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>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1316_E06
          Length = 110197

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                          
Query: 342    tcaaggaaggaacatccacattctccattgtttgagtgggtcattggttataccgtaggt 401
              ||||| ||||||||||| ||  ||||||| |||||||||||||| |||||||| || |||
Sbjct: 108827 tcaagaaaggaacatccgcaagctccattatttgagtgggtcataggttatacagttggt 108886

                                                  
Query: 402    tgtgttgctactcttcctcttctctactggcgctat 437
              ||| ||||||| || || | ||| || |||||||||
Sbjct: 108887 tgttttgctacactaccccatctttattggcgctat 108922
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>dbj|AK066424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061F22, full
           insert sequence
          Length = 1504

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                       
Query: 342 tcaaggaaggaacatccacattctccattgtttgagtgggtcattggttataccgtaggt 401
           ||||| ||||||||||| ||  ||||||| |||||||||||||| |||||||| || |||
Sbjct: 448 tcaagaaaggaacatccgcaagctccattatttgagtgggtcataggttatacagttggt 507

                                               
Query: 402 tgtgttgctactcttcctcttctctactggcgctat 437
           ||| ||||||| || || | ||| || |||||||||
Sbjct: 508 tgttttgctacactaccccatctttattggcgctat 543
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>gb|AY109133.1| Zea mays PCO130972 mRNA sequence
          Length = 1326

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 86/106 (81%)
 Strand = Plus / Plus

                                                                        
Query: 304  ttagccagattatagcggccatttgtgttctgtcattgtcaaggaaggaacatccacatt 363
            ||||||||||| | || ||||||  |||||| |   ||||||| |||||||| |||||  
Sbjct: 940  ttagccagattgttgctgccattgttgttctttgtgtgtcaagaaaggaacacccacaag 999

                                                          
Query: 364  ctccattgtttgagtgggtcattggttataccgtaggttgtgttgc 409
            |||||||  ||||||||||||| ||||| || || |||||| ||||
Sbjct: 1000 ctccattacttgagtgggtcataggttacactgttggttgttttgc 1045
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>gb|AC105216.3| Homo sapiens chromosome 18, clone RP11-382C11, complete sequence
          Length = 154590

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 3      atagaagcagacagtgaaacag 24
              ||||||||||||||||||||||
Sbjct: 140540 atagaagcagacagtgaaacag 140519
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>gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, complete sequence
          Length = 173602

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 3      atagaagcagacagtgaaacag 24
              ||||||||||||||||||||||
Sbjct: 154380 atagaagcagacagtgaaacag 154401
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>emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20 on chromosome 22q12.3-13.1
              Contains the 3' part of the CACNA1I gene for
              voltage-dependent calcium channel, alpha 1I subunit, ESTs,
              STSs, GSSs and a putative CpG island, complete sequence
          Length = 213721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1      gaatagaagcagacagtgaaa 21
              |||||||||||||||||||||
Sbjct: 101907 gaatagaagcagacagtgaaa 101887
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>emb|AL772265.5| Mouse DNA sequence from clone RP23-2D7 on chromosome 2, complete
             sequence
          Length = 212009

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    gacagcccaagggatgatgtt 104
             |||||||||||||||||||||
Sbjct: 96483 gacagcccaagggatgatgtt 96463
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>gb|AC120375.11| Mus musculus chromosome 14, clone RP24-123H11, complete sequence
          Length = 158760

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    ttctgtcattgtcaaggaag 350
              ||||||||||||||||||||
Sbjct: 103294 ttctgtcattgtcaaggaag 103275
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>gb|U40802.2| Caenorhabditis elegans cosmid ZC477, complete sequence
          Length = 31787

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     agaagcagacagtgaaacag 24
             ||||||||||||||||||||
Sbjct: 14401 agaagcagacagtgaaacag 14420
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>gb|AC125539.4| Mus musculus BAC clone RP23-150M18 from 15, complete sequence
          Length = 204453

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    ctcttcctcttctctactgg 431
              ||||||||||||||||||||
Sbjct: 175701 ctcttcctcttctctactgg 175720
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>gb|AC113598.8| Mus musculus chromosome 14, clone RP23-476N23, complete sequence
          Length = 214461

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    ttctgtcattgtcaaggaag 350
              ||||||||||||||||||||
Sbjct: 204159 ttctgtcattgtcaaggaag 204178
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>gb|AC091523.23| Mus musculus strain C57BL/6J clone rp23-77a8 map 1, complete sequence
          Length = 235509

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 467    ggaaccagcaagtcagaact 486
              ||||||||||||||||||||
Sbjct: 173668 ggaaccagcaagtcagaact 173687
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>gb|AC123571.8| Medicago truncatula clone mth1-14n3, complete sequence
          Length = 84556

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   gttgtgttgctactcttcct 419
             ||||||||||||||||||||
Sbjct: 62374 gttgtgttgctactcttcct 62393
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>emb|Z68323.2|HSN13G6 Human DNA sequence from clone LL22NC03-13G6 on chromosome 22, complete
             sequence
          Length = 31004

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 550   aagctggttttgtaactgaaacaa 573
             |||||| |||||||||||||||||
Sbjct: 19085 aagctgcttttgtaactgaaacaa 19062
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>emb|AL442065.11| Human DNA sequence from clone RP11-541M23 on chromosome 1 Contains
            part of the RYR2 gene for ryanodine receptor 2 (cardiac)
            and a CpG island, complete sequence
          Length = 104563

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 562  taactgaaacaaatggagtc 581
            ||||||||||||||||||||
Sbjct: 7792 taactgaaacaaatggagtc 7773
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>gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, complete sequence
          Length = 214509

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 467   ggaaccagcaagtcagaact 486
             ||||||||||||||||||||
Sbjct: 12156 ggaaccagcaagtcagaact 12175
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>emb|CR932960.3| Medicago truncatula chromosome 5 clone mth4-7a5, COMPLETE SEQUENCE
          Length = 199033

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 503   acctgagtccaattctcaca 522
             ||||||||||||||||||||
Sbjct: 72192 acctgagtccaattctcaca 72211
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>emb|BX511155.25| Zebrafish DNA sequence from clone DKEY-56D18 in linkage group 19,
              complete sequence
          Length = 205235

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    ttgctggatctccattgagc 291
              ||||||||||||||||||||
Sbjct: 144181 ttgctggatctccattgagc 144200
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>emb|BX323573.7| Zebrafish DNA sequence from clone DKEYP-98F5, complete sequence
          Length = 181694

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 51    atggaaaatactgctcatcgtgagattg 78
             ||||||||||||||||||| | ||||||
Sbjct: 53210 atggaaaatactgctcatcataagattg 53183
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>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    gacagtgaaacagacaatca 31
             ||||||||||||||||||||
Sbjct: 59702 gacagtgaaacagacaatca 59683
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>emb|AL954188.10| Zebrafish DNA sequence from clone DKEY-27J17, complete sequence
          Length = 210971

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 51     atggaaaatactgctcatcgtgagattg 78
              ||||||||||||||||||| | ||||||
Sbjct: 185743 atggaaaatactgctcatcataagattg 185716
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>gb|AC098584.2| Homo sapiens BAC clone RP11-10L11 from 4, complete sequence
          Length = 159206

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   tcaaagtgctcctctagcaa 222
             ||||||||||||||||||||
Sbjct: 71064 tcaaagtgctcctctagcaa 71083
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>emb|BX510327.10| Zebrafish DNA sequence from clone CH211-253J24 in linkage group 20,
              complete sequence
          Length = 200187

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 4      tagaagcagacagtgaaacagaca 27
              ||||||||||||| ||||||||||
Sbjct: 164974 tagaagcagacagggaaacagaca 164951
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>emb|BX072550.6| Zebrafish DNA sequence from clone DKEY-24P1 in linkage group 15, complete
              sequence
          Length = 229061

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 551    agctggttttgtaactgaaa 570
              ||||||||||||||||||||
Sbjct: 190821 agctggttttgtaactgaaa 190802
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>emb|AJ251561.1|ANI251561 Aspergillus nidulans mstA gene for MSTA protein, exons 1-6
          Length = 3420

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 58   atactgctcatcgtgagatt 77
            ||||||||||||||||||||
Sbjct: 3328 atactgctcatcgtgagatt 3309
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>gb|AC119177.11| Mus musculus chromosome 15, clone RP24-559L16, complete sequence
          Length = 246547

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 412   ctcttcctcttctctactgg 431
             ||||||||||||||||||||
Sbjct: 57543 ctcttcctcttctctactgg 57562
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>dbj|AP001835.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-668M17, complete
              sequences
          Length = 204939

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 403    gtgttgctactcttcctctt 422
              ||||||||||||||||||||
Sbjct: 123938 gtgttgctactcttcctctt 123919


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,063,317
Number of Sequences: 3902068
Number of extensions: 5063317
Number of successful extensions: 91648
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91492
Number of HSP's gapped (non-prelim): 156
length of query: 601
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 578
effective length of database: 17,143,297,704
effective search space: 9908826072912
effective search space used: 9908826072912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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