ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3k18 |
|---|---|
| Clone Library Name | barley_pub |
>SGO1_KLULA (Q6CXI9) Shugoshin| Length = 594 Score = 36.6 bits (83), Expect = 0.072 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = +2 Query: 314 VNDDEVAGIAELKKKSSKSKRPTIKTLFESMDEDEPVHGSFLNMLPHKEGQP---SSHSS 484 +NDDEV + + ++KSS+ + I FE DED + LN LP E +P ++ +S Sbjct: 161 LNDDEVRPLRKRRRKSSRRESLFIPADFEFNDEDPELE---LNQLPITEDEPPPSTAATS 217 Query: 485 APPEQYQ 505 P E+ Q Sbjct: 218 VPEEESQ 224
>KAPB2_BOVIN (P24256) cAMP-dependent protein kinase, beta-2-catalytic subunit| (EC 2.7.11.11) (PKA C-beta-2) Length = 397 Score = 32.7 bits (73), Expect = 1.0 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 357 VEAPFIPKFRGSGDTSNFDDYEEEDIRVSITEKCG 391
>KAPCB_PIG (P05383) cAMP-dependent protein kinase, beta-catalytic subunit (EC| 2.7.11.11) (PKA C-beta) Length = 350 Score = 32.7 bits (73), Expect = 1.0 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 310 VEAPFIPKFRGSGDTSNFDDYEEEDIRVSITEKCG 344
>KAPB1_BOVIN (P05131) cAMP-dependent protein kinase, beta-1-catalytic subunit| (EC 2.7.11.11) (PKA C-beta-1) Length = 350 Score = 32.7 bits (73), Expect = 1.0 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 310 VEAPFIPKFRGSGDTSNFDDYEEEDIRVSITEKCG 344
>KAPCB_RAT (P68182) cAMP-dependent protein kinase, beta-catalytic subunit (EC| 2.7.11.11) (PKA C-beta) Length = 350 Score = 32.3 bits (72), Expect = 1.4 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 310 VEAPFIPKFRGSGDTSNFDDYEEEEIRVSITEKCG 344
>KAPCB_MOUSE (P68181) cAMP-dependent protein kinase, beta-catalytic subunit (EC| 2.7.11.11) (PKA C-beta) Length = 350 Score = 32.3 bits (72), Expect = 1.4 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 310 VEAPFIPKFRGSGDTSNFDDYEEEEIRVSITEKCG 344
>KAPCB_CRIGR (P68180) cAMP-dependent protein kinase, beta-catalytic subunit (EC| 2.7.11.11) (PKA C-beta) Length = 350 Score = 32.3 bits (72), Expect = 1.4 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 310 VEAPFIPKFRGSGDTSNFDDYEEEEIRVSITEKCG 344
>KAPC_DROME (P12370) cAMP-dependent protein kinase catalytic subunit (EC| 2.7.11.11) (PKA C) Length = 352 Score = 32.0 bits (71), Expect = 1.8 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSK 101 ++A FIP G DT NF+ +EE ++ S+ K Sbjct: 312 IEAPFIPRCKGPGDTSNFDDYEEEALRISSTEK 344
>KAPCA_CANFA (Q8MJ44) cAMP-dependent protein kinase, alpha-catalytic subunit (EC| 2.7.11.11) (PKA C-alpha) Length = 349 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 309 VEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCG 343
>KAPCA_SHEEP (Q9MZD9) cAMP-dependent protein kinase, alpha-catalytic subunit (EC| 2.7.11.11) (PKA C-alpha) Length = 350 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 310 VEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCG 344
>KAPCA_RAT (P27791) cAMP-dependent protein kinase, alpha-catalytic subunit (EC| 2.7.11.11) (PKA C-alpha) Length = 350 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 310 VEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCG 344
>KAPCA_PIG (P36887) cAMP-dependent protein kinase, alpha-catalytic subunit (EC| 2.7.11.11) (PKA C-alpha) Length = 350 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 310 VEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCG 344
>KAPCA_MOUSE (P05132) cAMP-dependent protein kinase, alpha-catalytic subunit (EC| 2.7.11.11) (PKA C-alpha) Length = 350 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 310 VEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCG 344
>KAPCA_HUMAN (P17612) cAMP-dependent protein kinase, alpha-catalytic subunit (EC| 2.7.11.11) (PKA C-alpha) Length = 350 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 310 VEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCG 344
>KAPCA_CRIGR (P25321) cAMP-dependent protein kinase, alpha-catalytic subunit (EC| 2.7.11.11) (PKA C-alpha) Length = 350 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 310 VEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCG 344
>KAPCA_BOVIN (P00517) cAMP-dependent protein kinase, alpha-catalytic subunit (EC| 2.7.11.11) (PKA C-alpha) Length = 350 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSKAG 107 ++A FIP+ G DT NF+ +EE +V + K G Sbjct: 310 VEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCG 344
>Y022_BUCBP (Q89B32) Hypothetical UPF0069 protein bbp_022| Length = 340 Score = 30.8 bits (68), Expect = 4.0 Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 9/101 (8%) Frame = +2 Query: 311 IVNDDEVAGIAELKKKSSKSKRPTIKTLFE---------SMDEDEPVHGSFLNMLPHKEG 463 I N DE+ LK + K ++ LF M +++P L +LPH + Sbjct: 22 ITNPDELLRTLNLKSNTKYFKNIQVQKLFSLRVPKTFVSRMKKNDPFDPLLLQILPHTKE 81 Query: 464 QPSSHSSAPPEQYQPST*IGYGRF*KVNHRKVKERKNNCCL 586 ++H+ + I G K N+R + K NC + Sbjct: 82 LKNNHNFVQDPLEETKNVIIPGLIRKYNNRILLLLKTNCAI 122
>KAPCB_HUMAN (P22694) cAMP-dependent protein kinase, beta-catalytic subunit (EC| 2.7.11.11) (PKA C-beta) Length = 350 Score = 30.4 bits (67), Expect = 5.2 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 3 MKAAFIPEVNGELDTQNFEKFEETGAQVQSSSK 101 ++A FIP+ G DT NF+ +EE +V + K Sbjct: 310 VEAPFIPKFRGSGDTSNFDDYEEEDIRVSITEK 342 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,070,613 Number of Sequences: 219361 Number of extensions: 2044679 Number of successful extensions: 5489 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 5276 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5488 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
