ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3j20 |
|---|---|
| Clone Library Name | barley_pub |
>TSCC1_MOUSE (Q8K0G5) Protein TSSC1| Length = 386 Score = 139 bits (351), Expect(2) = 1e-34 Identities = 71/177 (40%), Positives = 107/177 (60%), Gaps = 7/177 (3%) Frame = +1 Query: 7 LEQLFALDDHTD-KIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADML 183 LE L LD+ + CV+W P+G K+IS+ D +I LW++ PS+ A + S + + Sbjct: 123 LELLCHLDNSAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSATLEGR 182 Query: 184 PNLR--GGAWDPH-NHNAVATITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQN 345 L+ G W PH N VAT +D++L WD RSM + IE+AH +RD+D+NP KQ Sbjct: 183 GQLKFTAGRWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQY 242 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 +A+ D+ ++ WD R + P+K L HSHW W+VR+N +D+L+L+ +DS V L Sbjct: 243 YLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVIL 299 Score = 26.6 bits (57), Expect(2) = 1e-34 Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 4/28 (14%) Frame = +2 Query: 578 RQEEPL----LNSYTDYEDSIYGIAWSS 649 + +EPL + +Y ++EDS+Y + W+S Sbjct: 329 KSKEPLQDNVIATYEEHEDSVYAVDWAS 356
>TSSC1_RAT (Q5PPK9) Protein TSSC1| Length = 386 Score = 139 bits (350), Expect(2) = 2e-34 Identities = 71/177 (40%), Positives = 107/177 (60%), Gaps = 7/177 (3%) Frame = +1 Query: 7 LEQLFALDDHTD-KIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADML 183 LE L LD+ + CV+W P+G K+IS+ D +I LW++ PS+ A + S + + Sbjct: 123 LELLCHLDNGAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSAALEGR 182 Query: 184 PNLR--GGAWDPH-NHNAVATITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQN 345 L+ G W PH N VAT +D++L WD RSM + IE+AH +RD+D+NP KQ Sbjct: 183 GQLKFTSGRWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQY 242 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 +A+ D+ ++ WD R + P+K L HSHW W+VR+N +D+L+L+ +DS V L Sbjct: 243 YLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVIL 299 Score = 26.6 bits (57), Expect(2) = 2e-34 Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 4/28 (14%) Frame = +2 Query: 578 RQEEPL----LNSYTDYEDSIYGIAWSS 649 + +EPL + +Y ++EDS+Y + W+S Sbjct: 329 KSKEPLQDNVIATYEEHEDSVYAVDWAS 356
>TSSC1_BRARE (Q5XJP1) Protein TSSC1| Length = 387 Score = 135 bits (341), Expect(2) = 5e-34 Identities = 68/177 (38%), Positives = 108/177 (61%), Gaps = 7/177 (3%) Frame = +1 Query: 7 LEQLFALDDHTD-KIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADML 183 LE L LD+ + CVLW P+G ++IS+ + ++ LW++ S+ A + S + + Sbjct: 123 LELLCHLDNSAHGSMACVLWEPMGDGKRVISLAENHVLLWDLQESSAKATISSSATLEGK 182 Query: 184 PNLR--GGAWDPH-NHNAVATITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQN 345 L+ G W PH N +AT D+++ WDLRSM + IE+AH +RD+D+NP KQ Sbjct: 183 GQLKFTAGKWSPHHNCTQLATANDTAIRGWDLRSMSQIYCIENAHGQLVRDLDFNPNKQY 242 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 +A+ D+ ++ WD+R + P+K L HSHW W+VR+N +D+L+L+A +DS V L Sbjct: 243 YLASCGDDCKVKFWDVRHISEPVKCLEEHSHWVWSVRYNHSHDQLLLTASSDSRVIL 299 Score = 28.5 bits (62), Expect(2) = 5e-34 Identities = 7/22 (31%), Positives = 18/22 (81%) Frame = +2 Query: 584 EEPLLNSYTDYEDSIYGIAWSS 649 ++ ++++Y ++EDS+Y + WS+ Sbjct: 336 QDSIISTYEEHEDSVYAVEWSA 357
>TSSC1_PONPY (Q5RE10) Protein TSSC1| Length = 414 Score = 135 bits (340), Expect(2) = 7e-34 Identities = 71/177 (40%), Positives = 104/177 (58%), Gaps = 7/177 (3%) Frame = +1 Query: 7 LEQLFALDDHTD-KIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADML 183 LE L LD+ + CV+W P+G K+IS+ D +I LW++ S+ A + S S + Sbjct: 150 LELLCHLDNTAHGNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGK 209 Query: 184 PNLR--GGAWDPH-NHNAVATITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQN 345 L+ G W PH N VAT D++L WD RSM + IE+AH +RD+D+NP KQ Sbjct: 210 GQLKFTSGRWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQY 269 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 +A+ D+ ++ WD R + P+K L HSHW W VR+N +D+L+L+ +DS V L Sbjct: 270 YLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVLTGSSDSRVIL 326 Score = 28.5 bits (62), Expect(2) = 7e-34 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 4/31 (12%) Frame = +2 Query: 569 SPTRQEEPL----LNSYTDYEDSIYGIAWSS 649 S + +EPL + +Y ++EDS+Y + WSS Sbjct: 354 SEEKSKEPLQDNVIATYEEHEDSVYAVDWSS 384
>TSSC1_HUMAN (Q53HC9) Protein TSSC1 (Tumor-suppressing subchromosomal| transferable fragment candidate gene 1 protein) (Tumor-suppressing STF cDNA 1 protein) Length = 387 Score = 135 bits (340), Expect(2) = 7e-34 Identities = 71/177 (40%), Positives = 104/177 (58%), Gaps = 7/177 (3%) Frame = +1 Query: 7 LEQLFALDDHTD-KIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADML 183 LE L LD+ + CV+W P+G K+IS+ D +I LW++ S+ A + S S + Sbjct: 123 LELLCHLDNTAHGNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGK 182 Query: 184 PNLR--GGAWDPH-NHNAVATITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQN 345 L+ G W PH N VAT D++L WD RSM + IE+AH +RD+D+NP KQ Sbjct: 183 GQLKFTSGRWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQY 242 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 +A+ D+ ++ WD R + P+K L HSHW W VR+N +D+L+L+ +DS V L Sbjct: 243 YLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVLTGSSDSRVIL 299 Score = 28.5 bits (62), Expect(2) = 7e-34 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 4/31 (12%) Frame = +2 Query: 569 SPTRQEEPL----LNSYTDYEDSIYGIAWSS 649 S + +EPL + +Y ++EDS+Y + WSS Sbjct: 327 SEEKSKEPLQDNVIATYEEHEDSVYAVDWSS 357
>TSSC1_XENLA (Q3KPT3) Protein TSSC1| Length = 387 Score = 133 bits (334), Expect(2) = 2e-33 Identities = 68/177 (38%), Positives = 104/177 (58%), Gaps = 7/177 (3%) Frame = +1 Query: 7 LEQLFALDDHTD-KIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADML 183 LE L LD + CV W PLG KL+S+ D + +W++ S+ + + S + + Sbjct: 123 LELLCHLDSTAHGNMACVTWEPLGDGKKLLSLADNYLLIWDLQESSTKSVLSSSATLEGK 182 Query: 184 PNLR--GGAWDPH-NHNAVATITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQN 345 LR G W PH N VAT D+++ WD+RSM++ IE+AH +RD+D+NP KQ Sbjct: 183 GQLRFTSGKWSPHHNCTQVATANDTAIRGWDIRSMRQIYCIENAHGQLVRDLDFNPNKQY 242 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 +A+ D+ ++ WD R + P+K L HSHW W+VR+N +D+L+L+ +DS V L Sbjct: 243 YLASCGDDCKVKFWDTRNIHEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVIL 299 Score = 29.3 bits (64), Expect(2) = 2e-33 Identities = 8/22 (36%), Positives = 17/22 (77%) Frame = +2 Query: 584 EEPLLNSYTDYEDSIYGIAWSS 649 ++ ++ +Y ++EDS+Y + WSS Sbjct: 336 QDSIIGTYEEHEDSVYAVEWSS 357
>TSSC1_MACFA (Q4R571) Protein TSSC1| Length = 387 Score = 133 bits (335), Expect(2) = 2e-33 Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 7/177 (3%) Frame = +1 Query: 7 LEQLFALDDHT-DKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADML 183 LE L LD+ + CV+W P+G K+IS+ D +I LW++ S+ A + S S Sbjct: 123 LELLCHLDNTAHSNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLGGK 182 Query: 184 PNLR--GGAWDPH-NHNAVATITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQN 345 L+ G W PH N VAT D++L WD R+M + IE+AH +RD+D+NP KQ Sbjct: 183 GQLKFTSGRWSPHHNCTQVATANDTTLRGWDTRTMSQIYCIENAHGQLVRDLDFNPNKQY 242 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 +A+ D+ ++ WD R + P+K L HSHW W VR+N +D+L+L+ +DS V L Sbjct: 243 YLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVLTGSSDSRVIL 299 Score = 28.5 bits (62), Expect(2) = 2e-33 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 4/31 (12%) Frame = +2 Query: 569 SPTRQEEPL----LNSYTDYEDSIYGIAWSS 649 S + +EPL + +Y ++EDS+Y + WSS Sbjct: 327 SEEKSKEPLQDNVIATYEEHEDSVYAVDWSS 357
>TSSC1_XENTR (Q5M8I4) Protein TSSC1| Length = 387 Score = 132 bits (332), Expect(2) = 5e-33 Identities = 68/177 (38%), Positives = 105/177 (59%), Gaps = 7/177 (3%) Frame = +1 Query: 7 LEQLFALDDHTD-KIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADML 183 LE L LD+ + CV W PLG KL+S+ D + +W++ S+ + + S + + Sbjct: 123 LELLCHLDNTAHGNMACVTWEPLGDGKKLLSLADNYLMIWDLQESSTKSVLSSSVTLEGK 182 Query: 184 PNLR--GGAWDPH-NHNAVATITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQN 345 LR G W PH N VAT D+++ WD+RSM++ IE+AH +RD+D+NP KQ Sbjct: 183 GQLRFTSGKWSPHHNCTQVATANDTAIRGWDIRSMRQIYCIENAHGQLVRDLDFNPNKQY 242 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 +A+ D+ ++ WD R + P+K L HSHW W+VR+N +D+L+L+ +DS V L Sbjct: 243 YLASCGDDCKVKFWDTRNIHEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVIL 299 Score = 28.5 bits (62), Expect(2) = 5e-33 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 4/28 (14%) Frame = +2 Query: 578 RQEEPLLNS----YTDYEDSIYGIAWSS 649 + +EPL +S Y ++EDS+Y + WSS Sbjct: 330 KTKEPLQDSVIATYEEHEDSVYAVEWSS 357
>TSSC1_GECJA (Q6DUZ9) Protein TSSC1| Length = 387 Score = 129 bits (324), Expect(2) = 5e-32 Identities = 63/160 (39%), Positives = 97/160 (60%), Gaps = 6/160 (3%) Frame = +1 Query: 55 VLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR--GGAWDPH-NHN 225 VLW P+G KLIS+ D ++ LW++ S+ A + + + + L+ G W PH N Sbjct: 140 VLWEPMGDGKKLISLADNHLLLWDLQESSSKAVLSNSAALEGKGQLKFTSGRWSPHHNCT 199 Query: 226 AVATITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQNIIATAEDEFGIRLWDLR 396 VAT D+++ WD+R+M + IE AH +RD+D+NP KQ +A+ D+ ++ WD R Sbjct: 200 QVATANDTAIRGWDIRTMSQIYCIESAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTR 259 Query: 397 MLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 + P+K L HSHW W VR+N +D+L+L+A +DS V L Sbjct: 260 NVSDPVKTLEEHSHWVWNVRYNHSHDQLVLTASSDSRVIL 299 Score = 28.5 bits (62), Expect(2) = 5e-32 Identities = 8/22 (36%), Positives = 17/22 (77%) Frame = +2 Query: 584 EEPLLNSYTDYEDSIYGIAWSS 649 ++ ++ +Y ++EDS+Y + WSS Sbjct: 336 QDSIIATYEEHEDSVYAVEWSS 357
>RBBP7_BRARE (Q7ZTY4) Histone-binding protein RBBP7 (Retinoblastoma-binding| protein 7) (RBBP-7) Length = 426 Score = 72.8 bits (177), Expect = 8e-13 Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 13/179 (7%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHN 225 W P + L + DD I LW+I + K K++ G ++ ++ +W + + Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDV---SWHLLHES 241 Query: 226 AVATITDSS-LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRL 384 ++ D L WD RS K S++++ AH +V+ +NP + I+AT + + L Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL 300 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDSGPES 558 WDLR LK L H + V+ +P + ++ S+GTD +N+W L+K+G + S ++ Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 359 Score = 42.4 bits (98), Expect = 0.001 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 ++D HT ++ C+ + P + D+ + LW D N K+ S + D + ++ Sbjct: 268 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQ- 324 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 325 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 382 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
>RBBP7_XENTR (Q6P315) Histone-binding protein RBBP7 (Retinoblastoma-binding| protein 7) (RBBP-7) Length = 425 Score = 72.4 bits (176), Expect = 1e-12 Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 13/170 (7%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHNAVATITDSS 252 L + DD + LW+I K KV+ G + ++ ++ AW + + ++ D Sbjct: 193 LSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDV---AWHLLHESLFGSVADDQ 249 Query: 253 -LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLRMLKHP 411 L WD RS K S++++ AH +V+ +NP + I+AT + + LWDLR LK Sbjct: 250 KLMIWDTRSNTTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK 308 Query: 412 LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDSGPES 558 L H + V +P + ++ S+GTD +N+W L+K+G + S ++ Sbjct: 309 LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 358 Score = 42.4 bits (98), Expect = 0.001 Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 ++D HT ++ C+ + P + D+ + LW D N K+ S + D + + Sbjct: 267 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVH- 323 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 324 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 382 NPNEPWVICSVSEDNIMQIWQM 403
>RBBP7_XENLA (Q8AVH1) Histone-binding protein RBBP7 (Retinoblastoma-binding| protein 7) (RBBP-7) Length = 425 Score = 72.4 bits (176), Expect = 1e-12 Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 13/170 (7%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHNAVATITDSS 252 L + DD + LW+I K KV+ G + ++ ++ AW + + ++ D Sbjct: 193 LSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDV---AWHLLHESLFGSVADDQ 249 Query: 253 -LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLRMLKHP 411 L WD RS K S++++ AH +V+ +NP + I+AT + + LWDLR LK Sbjct: 250 KLMIWDTRSNTTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK 308 Query: 412 LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDSGPES 558 L H + V +P + ++ S+GTD +N+W L+K+G + S ++ Sbjct: 309 LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 358 Score = 42.4 bits (98), Expect = 0.001 Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 ++D HT ++ C+ + P + D+ + LW D N K+ S + D + + Sbjct: 267 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVH- 323 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 324 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 382 NPNEPWVICSVSEDNIMQIWQM 403
>RBBP4_BRARE (Q6P3H7) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) Length = 423 Score = 72.0 bits (175), Expect = 1e-12 Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 13/175 (7%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHN 225 W P + L + DD I LW+I K K++ G ++ ++ +W + + Sbjct: 184 WNPNLRSCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDV---SWHLLHES 240 Query: 226 AVATITDSS-LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRL 384 ++ D L WD RS K S+A++ AH +V+ +NP + I+AT + + L Sbjct: 241 LFGSVADDQKLMIWDTRSNNTSKPSHAVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL 299 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 WDLR LK L H + V+ +P + ++ S+GTD +N+W L+K+G + S Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354 Score = 42.7 bits (99), Expect = 0.001 Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 A+D HT ++ C+ + P + D+ + LW D N K+ S + D + ++ Sbjct: 267 AVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQ- 323 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 324 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 382 NPNEPWVICSVSEDNIMQVWQM 403 Score = 30.0 bits (66), Expect = 6.2 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 11/76 (14%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLP-----------GHSHWTWAVRHNPEY 471 Y P+ IIAT + ++D KHP K P GH + + NP Sbjct: 131 YMPQNPCIIATKTPTSDVLVFDYT--KHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNL 188 Query: 472 DELILSAGTDSAVNLW 519 +LSA D + LW Sbjct: 189 RSCLLSASDDHTICLW 204
>RBBP7_CHICK (Q9I8G9) Histone-binding protein RBBP7 (Retinoblastoma-binding| protein 7) (RBBP-7) (Retinoblastoma-binding protein p46) Length = 424 Score = 72.0 bits (175), Expect = 1e-12 Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 13/170 (7%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHNAVATITDSS 252 L + DD + LW+I K K++ G + ++ ++ AW + + ++ D Sbjct: 192 LSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV---AWHLLHESLFGSVADDQ 248 Query: 253 -LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLRMLKHP 411 L WD RS K S++++ AH +V+ +NP + I+AT + + LWDLR LK Sbjct: 249 KLMIWDTRSNTTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK 307 Query: 412 LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDSGPES 558 L H + V +P + ++ S+GTD +N+W L+K+G + S ++ Sbjct: 308 LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 357 Score = 42.4 bits (98), Expect = 0.001 Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 ++D HT ++ C+ + P + D+ + LW D N K+ S + D + + Sbjct: 266 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVH- 322 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 323 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 380 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 381 NPNEPWVICSVSEDNIMQIWQM 402
>RBP4B_XENLA (Q6INH0) Histone-binding protein RBBP4-B (Retinoblastoma-binding| protein 4-B) (RBBP-4-B) (Retinoblastoma-binding protein p48-B) Length = 424 Score = 71.6 bits (174), Expect = 2e-12 Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 13/175 (7%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHN 225 W P + L + DD I LW+I K KV+ G ++ ++ +W + + Sbjct: 184 WNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDV---SWHLLHES 240 Query: 226 AVATITDSS-LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRL 384 ++ D L WD RS K S++++ AH +V+ +NP + I+AT + + L Sbjct: 241 LFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL 299 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 WDLR LK L H + V+ +P + ++ S+GTD +N+W L+K+G + S Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 ++D HT ++ C+ + P + D+ + LW D N K+ S + D + ++ Sbjct: 267 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQ- 323 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 324 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 382 NPNEPWVICSVSEDNIMQVWQM 403 Score = 29.6 bits (65), Expect = 8.1 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 11/76 (14%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLP-----------GHSHWTWAVRHNPEY 471 Y P+ IIAT + ++D KHP K P GH + + NP Sbjct: 131 YMPQNPCIIATKTPSCDVLVFDYT--KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNL 188 Query: 472 DELILSAGTDSAVNLW 519 +LSA D + LW Sbjct: 189 SGNLLSASDDHTICLW 204
>RBP4A_XENLA (O93377) Histone-binding protein RBBP4-A (Retinoblastoma-binding| protein 4-A) (RBBP-4-A) (Retinoblastoma-binding protein p48-A) Length = 424 Score = 71.6 bits (174), Expect = 2e-12 Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 13/175 (7%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHN 225 W P + L + DD I LW+I K KV+ G ++ ++ +W + + Sbjct: 184 WNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDV---SWHLLHES 240 Query: 226 AVATITDSS-LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRL 384 ++ D L WD RS K S++++ AH +V+ +NP + I+AT + + L Sbjct: 241 LFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL 299 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 WDLR LK L H + V+ +P + ++ S+GTD +N+W L+K+G + S Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 ++D HT ++ C+ + P + D+ + LW D N K+ S + D + ++ Sbjct: 267 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQ- 323 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 324 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 382 NPNEPWVICSVSEDNIMQVWQM 403
>RBBP4_XENTR (Q5M7K4) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) Length = 424 Score = 71.6 bits (174), Expect = 2e-12 Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 13/175 (7%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHN 225 W P + L + DD I LW+I K KV+ G ++ ++ +W + + Sbjct: 184 WNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDV---SWHLLHES 240 Query: 226 AVATITDSS-LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRL 384 ++ D L WD RS K S++++ AH +V+ +NP + I+AT + + L Sbjct: 241 LFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL 299 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 WDLR LK L H + V+ +P + ++ S+GTD +N+W L+K+G + S Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 ++D HT ++ C+ + P + D+ + LW D N K+ S + D + ++ Sbjct: 267 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQ- 323 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 324 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 382 NPNEPWVICSVSEDNIMQVWQM 403 Score = 29.6 bits (65), Expect = 8.1 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 11/76 (14%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLP-----------GHSHWTWAVRHNPEY 471 Y P+ IIAT + ++D KHP K P GH + + NP Sbjct: 131 YMPQNPCIIATKTPSSDVLVFDYT--KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNL 188 Query: 472 DELILSAGTDSAVNLW 519 +LSA D + LW Sbjct: 189 SGNLLSASDDHTICLW 204
>RBBP7_RAT (Q71UF4) Histone-binding protein RBBP7 (Retinoblastoma-binding| protein 7) (RBBP-7) Length = 425 Score = 71.2 bits (173), Expect = 2e-12 Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 12/169 (7%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHNAVATITDSS 252 L + DD + LW+I+ K K++ G + ++ ++ AW + + ++ D Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV---AWHLLHESLFGSVADDQ 249 Query: 253 -LHFWDLRSMKRSNA--IEHAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLRMLKHPL 414 L WD RS S + AH +V+ +NP + I+AT + + LWDLR LK L Sbjct: 250 KLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 309 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDSGPES 558 H + V +P + ++ S+GTD +N+W L+K+G + S ++ Sbjct: 310 HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 358 Score = 40.8 bits (94), Expect = 0.004 Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 17/140 (12%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 +D HT ++ C+ + P + D+ + LW++ ++ K+ + Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKLKLHTFESHKDEIFQVH 323 Query: 205 WDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDYNP 333 W PHN +A+ TD L+ WDL + + E A I D +NP Sbjct: 324 WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383 Query: 334 KKQNIIATAEDEFGIRLWDL 393 + +I + ++ +++W + Sbjct: 384 NEPWVICSVSEDNIMQIWQM 403
>RBBP7_MOUSE (Q60973) Histone-binding protein RBBP7 (Retinoblastoma-binding| protein 7) (RBBP-7) (Retinoblastoma-binding protein p46) (Histone acetyltransferase type B subunit 2) Length = 425 Score = 71.2 bits (173), Expect = 2e-12 Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 12/169 (7%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHNAVATITDSS 252 L + DD + LW+I+ K K++ G + ++ ++ AW + + ++ D Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV---AWHLLHESLFGSVADDQ 249 Query: 253 -LHFWDLRSMKRSNA--IEHAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLRMLKHPL 414 L WD RS S + AH +V+ +NP + I+AT + + LWDLR LK L Sbjct: 250 KLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 309 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDSGPES 558 H + V +P + ++ S+GTD +N+W L+K+G + S ++ Sbjct: 310 HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 358 Score = 40.8 bits (94), Expect = 0.004 Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 17/140 (12%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 +D HT ++ C+ + P + D+ + LW++ ++ K+ + Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKLKLHTFESHKDEIFQVH 323 Query: 205 WDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDYNP 333 W PHN +A+ TD L+ WDL + + E A I D +NP Sbjct: 324 WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383 Query: 334 KKQNIIATAEDEFGIRLWDL 393 + +I + ++ +++W + Sbjct: 384 NEPWVICSVSEDNIMQIWQM 403
>RBBP7_MACFA (Q4R304) Histone-binding protein RBBP7 (Retinoblastoma-binding| protein 7) (RBBP-7) Length = 425 Score = 71.2 bits (173), Expect = 2e-12 Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 12/169 (7%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHNAVATITDSS 252 L + DD + LW+I+ K K++ G + ++ ++ AW + + ++ D Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV---AWHLLHESLFGSVADDQ 249 Query: 253 -LHFWDLRSMKRSNA--IEHAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLRMLKHPL 414 L WD RS S + AH +V+ +NP + I+AT + + LWDLR LK L Sbjct: 250 KLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 309 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDSGPES 558 H + V +P + ++ S+GTD +N+W L+K+G + S ++ Sbjct: 310 HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 358 Score = 40.8 bits (94), Expect = 0.004 Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 17/140 (12%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 +D HT ++ C+ + P + D+ + LW++ ++ K+ + Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKLKLHTFESHKDEIFQVH 323 Query: 205 WDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDYNP 333 W PHN +A+ TD L+ WDL + + E A I D +NP Sbjct: 324 WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383 Query: 334 KKQNIIATAEDEFGIRLWDL 393 + +I + ++ +++W + Sbjct: 384 NEPWVICSVSEDNIMQIWQM 403
>RBBP7_HUMAN (Q16576) Histone-binding protein RBBP7 (Retinoblastoma-binding| protein 7) (RBBP-7) (Retinoblastoma-binding protein p46) (Histone acetyltransferase type B subunit 2) Length = 425 Score = 71.2 bits (173), Expect = 2e-12 Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 12/169 (7%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHNAVATITDSS 252 L + DD + LW+I+ K K++ G + ++ ++ AW + + ++ D Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV---AWHLLHESLFGSVADDQ 249 Query: 253 -LHFWDLRSMKRSNA--IEHAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLRMLKHPL 414 L WD RS S + AH +V+ +NP + I+AT + + LWDLR LK L Sbjct: 250 KLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 309 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDSGPES 558 H + V +P + ++ S+GTD +N+W L+K+G + S ++ Sbjct: 310 HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 358 Score = 40.8 bits (94), Expect = 0.004 Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 17/140 (12%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 +D HT ++ C+ + P + D+ + LW++ ++ K+ + Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKLKLHTFESHKDEIFQVH 323 Query: 205 WDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDYNP 333 W PHN +A+ TD L+ WDL + + E A I D +NP Sbjct: 324 WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383 Query: 334 KKQNIIATAEDEFGIRLWDL 393 + +I + ++ +++W + Sbjct: 384 NEPWVICSVSEDNIMQIWQM 403
>RBBP7_BOVIN (Q3SWX8) Histone-binding protein RBBP7 (Retinoblastoma-binding| protein 7) (RBBP-7) Length = 425 Score = 71.2 bits (173), Expect = 2e-12 Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 12/169 (7%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHNAVATITDSS 252 L + DD + LW+I+ K K++ G + ++ ++ AW + + ++ D Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV---AWHLLHESLFGSVADDQ 249 Query: 253 -LHFWDLRSMKRSNA--IEHAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLRMLKHPL 414 L WD RS S + AH +V+ +NP + I+AT + + LWDLR LK L Sbjct: 250 KLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 309 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDSGPES 558 H + V +P + ++ S+GTD +N+W L+K+G + S ++ Sbjct: 310 HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 358 Score = 40.8 bits (94), Expect = 0.004 Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 17/140 (12%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 +D HT ++ C+ + P + D+ + LW++ ++ K+ + Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKLKLHTFESHKDEIFQVH 323 Query: 205 WDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDYNP 333 W PHN +A+ TD L+ WDL + + E A I D +NP Sbjct: 324 WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383 Query: 334 KKQNIIATAEDEFGIRLWDL 393 + +I + ++ +++W + Sbjct: 384 NEPWVICSVSEDNIMQIWQM 403
>LIN53_CAEEL (P90916) Probable histone-binding protein lin-53 (Abnormal cell| lineage protein 53) Length = 417 Score = 71.2 bits (173), Expect = 2e-12 Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 10/191 (5%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNK-----SAKVISQGSADM 180 L L HT + + W P + L + DD+ + W+I+ + AK + +G + Sbjct: 165 LIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESV 224 Query: 181 LPNLRGGAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAHIRDVD---YNPKKQNI 348 + ++ AW + ++ D L WD+R+ + I+ AH +V+ +NP + I Sbjct: 225 VEDV---AWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCID-AHSAEVNCLAFNPYSEFI 280 Query: 349 IATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LA 525 +AT + + LWDLR L+ L H + V+ +P + ++ S+GTD +++W L+ Sbjct: 281 LATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLS 340 Query: 526 KVGSDDSGPES 558 K+G D S ++ Sbjct: 341 KIGEDQSAEDA 351 Score = 43.9 bits (102), Expect = 4e-04 Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 18/141 (12%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRGG 201 +D H+ ++ C+ + P + D+ + LW++ N K+ S + D + ++ Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDL--RNLRMKLHSFESHRDEIFQVQ-- 316 Query: 202 AWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDYN 330 W PHN +A+ TD LH WDL + + E A I D +N Sbjct: 317 -WSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWN 375 Query: 331 PKKQNIIATAEDEFGIRLWDL 393 P + ++ + ++ +++W + Sbjct: 376 PNEPWVVCSVSEDNILQVWQM 396 Score = 39.7 bits (91), Expect = 0.008 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 10/75 (13%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKH----------PLKDLPGHSHWTWAVRHNPEYD 474 Y P+K NIIAT + ++D LKH PL L GH+ + + NP + Sbjct: 128 YMPQKSNIIATKSPHADVYIFDY--LKHSAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKE 185 Query: 475 ELILSAGTDSAVNLW 519 LILSA D V W Sbjct: 186 GLILSASDDQTVCHW 200 Score = 29.6 bits (65), Expect = 8.1 Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 11/97 (11%) Frame = +1 Query: 13 QLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDP--SNKSAKVISQGSADMLP 186 +L + + H D+I V W P + S D+ + +W++ ++SA+ G ++L Sbjct: 301 KLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELL- 359 Query: 187 NLRGG--------AWDPHNHNAVATIT-DSSLHFWDL 270 + GG +W+P+ V +++ D+ L W + Sbjct: 360 FIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
>RBBP4_PONPY (Q5RF92) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) Length = 424 Score = 70.9 bits (172), Expect = 3e-12 Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 13/175 (7%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHN 225 W P L + DD I LW+I K KV+ G ++ ++ +W + + Sbjct: 184 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDV---SWHLLHES 240 Query: 226 AVATITDSS-LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRL 384 ++ D L WD RS K S++++ AH +V+ +NP + I+AT + + L Sbjct: 241 LFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL 299 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 WDLR LK L H + V+ +P + ++ S+GTD +N+W L+K+G + S Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 ++D HT ++ C+ + P + D+ + LW D N K+ S + D + ++ Sbjct: 267 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQ- 323 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 324 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 382 NPNEPWVICSVSEDNIMQVWQM 403 Score = 29.6 bits (65), Expect = 8.1 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 11/76 (14%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLP-----------GHSHWTWAVRHNPEY 471 Y P+ IIAT + ++D KHP K P GH + + NP Sbjct: 131 YMPQNPCIIATKTPSSDVLVFDYT--KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNL 188 Query: 472 DELILSAGTDSAVNLW 519 +LSA D + LW Sbjct: 189 SGHLLSASDDHTICLW 204
>RBBP4_MOUSE (Q60972) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) (Retinoblastoma-binding protein p48) (Chromatin assembly factor 1 subunit C) (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit) Length = 424 Score = 70.9 bits (172), Expect = 3e-12 Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 13/175 (7%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHN 225 W P L + DD I LW+I K KV+ G ++ ++ +W + + Sbjct: 184 WNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV---SWHLLHES 240 Query: 226 AVATITDSS-LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRL 384 ++ D L WD RS K S++++ AH +V+ +NP + I+AT + + L Sbjct: 241 LFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL 299 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 WDLR LK L H + V+ +P + ++ S+GTD +N+W L+K+G + S Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 ++D HT ++ C+ + P + D+ + LW D N K+ S + D + ++ Sbjct: 267 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQ- 323 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 324 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 382 NPNEPWVICSVSEDNIMQVWQM 403 Score = 29.6 bits (65), Expect = 8.1 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 11/76 (14%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLP-----------GHSHWTWAVRHNPEY 471 Y P+ IIAT + ++D KHP K P GH + + NP Sbjct: 131 YMPQNPCIIATKTPSSDVLVFDYT--KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNL 188 Query: 472 DELILSAGTDSAVNLW 519 +LSA D + LW Sbjct: 189 SGHLLSASDDHTICLW 204
>RBBP4_HUMAN (Q09028) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) (Retinoblastoma-binding protein p48) (Chromatin assembly factor 1 subunit C) (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit) Length = 424 Score = 70.9 bits (172), Expect = 3e-12 Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 13/175 (7%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHN 225 W P L + DD I LW+I K KV+ G ++ ++ +W + + Sbjct: 184 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDV---SWHLLHES 240 Query: 226 AVATITDSS-LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRL 384 ++ D L WD RS K S++++ AH +V+ +NP + I+AT + + L Sbjct: 241 LFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL 299 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 WDLR LK L H + V+ +P + ++ S+GTD +N+W L+K+G + S Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 ++D HT ++ C+ + P + D+ + LW D N K+ S + D + ++ Sbjct: 267 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQ- 323 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 324 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 382 NPNEPWVICSVSEDNIMQVWQM 403 Score = 29.6 bits (65), Expect = 8.1 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 11/76 (14%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLP-----------GHSHWTWAVRHNPEY 471 Y P+ IIAT + ++D KHP K P GH + + NP Sbjct: 131 YMPQNPCIIATKTPSSDVLVFDYT--KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNL 188 Query: 472 DELILSAGTDSAVNLW 519 +LSA D + LW Sbjct: 189 SGHLLSASDDHTICLW 204
>RBBP4_CHICK (Q9W7I5) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) (Retinoblastoma-binding protein p48) (Chromatin assembly factor 1 subunit C) (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit) Length = 424 Score = 70.9 bits (172), Expect = 3e-12 Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 13/175 (7%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHN 225 W P L + DD I LW+I K KV+ G ++ ++ +W + + Sbjct: 184 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDV---SWHLLHES 240 Query: 226 AVATITDSS-LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRL 384 ++ D L WD RS K S++++ AH +V+ +NP + I+AT + + L Sbjct: 241 LFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL 299 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 WDLR LK L H + V+ +P + ++ S+GTD +N+W L+K+G + S Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 ++D HT ++ C+ + P + D+ + LW D N K+ S + D + ++ Sbjct: 267 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQ- 323 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 324 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 382 NPNEPWVICSVSEDNIMQVWQM 403 Score = 29.6 bits (65), Expect = 8.1 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 11/76 (14%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLP-----------GHSHWTWAVRHNPEY 471 Y P+ IIAT + ++D KHP K P GH + + NP Sbjct: 131 YMPQNPCIIATKTPSSDVLVFDYT--KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNL 188 Query: 472 DELILSAGTDSAVNLW 519 +LSA D + LW Sbjct: 189 SGHLLSASDDHTICLW 204
>RBBP4_BOVIN (Q3MHL3) Histone-binding protein RBBP4 (Retinoblastoma-binding| protein 4) (RBBP-4) Length = 424 Score = 70.9 bits (172), Expect = 3e-12 Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 13/175 (7%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHN 225 W P L + DD I LW+I K KV+ G ++ ++ +W + + Sbjct: 184 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDV---SWHLLHES 240 Query: 226 AVATITDSS-LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRL 384 ++ D L WD RS K S++++ AH +V+ +NP + I+AT + + L Sbjct: 241 LFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL 299 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 WDLR LK L H + V+ +P + ++ S+GTD +N+W L+K+G + S Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 18/142 (12%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRG 198 ++D HT ++ C+ + P + D+ + LW D N K+ S + D + ++ Sbjct: 267 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQ- 323 Query: 199 GAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDY 327 W PHN +A+ TD L+ WDL + + E A I D + Sbjct: 324 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 381 Query: 328 NPKKQNIIATAEDEFGIRLWDL 393 NP + +I + ++ +++W + Sbjct: 382 NPNEPWVICSVSEDNIMQVWQM 403 Score = 29.6 bits (65), Expect = 8.1 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 11/76 (14%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLP-----------GHSHWTWAVRHNPEY 471 Y P+ IIAT + ++D KHP K P GH + + NP Sbjct: 131 YMPQNPCIIATKTPSSDVLVFDYT--KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNL 188 Query: 472 DELILSAGTDSAVNLW 519 +LSA D + LW Sbjct: 189 SGHLLSASDDHTICLW 204
>RBBP7_PONPY (Q5R654) Histone-binding protein RBBP7 (Retinoblastoma-binding| protein 7) (RBBP-7) Length = 426 Score = 69.3 bits (168), Expect = 9e-12 Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 13/170 (7%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHNAVATITDSS 252 L + DD + LW+I+ K K++ G + ++ ++ AW + + ++ D Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDV---AWHLLHESLFGSVADDQ 249 Query: 253 -LHFWDLRSMKRSNA--IEHAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLRMLKHPL 414 L WD RS S + AH +V+ +NP + I+AT + + LWDLR LK L Sbjct: 250 KLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 309 Query: 415 KDLPGHSHWTWAVRH-NPEYDELILSAGTDSAVNLW-LAKVGSDDSGPES 558 H + V H +P + ++ S+GTD +N+W L+K+G + S ++ Sbjct: 310 HTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 359 Score = 41.6 bits (96), Expect = 0.002 Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 17/140 (12%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 +D HT ++ C+ + P + D+ + LW++ ++ + Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVH--- 324 Query: 205 WDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDYNP 333 W PHN +A+ TD L+ WDL + + E A I D +NP Sbjct: 325 WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 384 Query: 334 KKQNIIATAEDEFGIRLWDL 393 + +I + ++ +++W + Sbjct: 385 NEPWVICSVSEDNIMQIWQM 404 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 11/81 (13%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLP-----------GHSHWTWAVRHNPEY 471 Y P+ +IIAT G+ ++D KHP K P GH + + N Sbjct: 131 YMPQNPHIIATKTPSSGVLVFDYT--KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNL 188 Query: 472 DELILSAGTDSAVNLWLAKVG 534 +LSA D V LW G Sbjct: 189 SGHLLSASDDHTVCLWDINAG 209
>CAF1_DROME (Q24572) Probable histone-binding protein Caf1 (Chromatin assembly| factor 1 p55 subunit) (CAF-1 p55 subunit) (dCAF-1) (Nucleosome remodeling factor 55 kDa subunit) (NURF-55) Length = 430 Score = 67.8 bits (164), Expect = 3e-11 Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 13/166 (7%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQ-----GSADMLPNLRGGAWDPHNHNAVATITDSS 252 L + DD I LW+I+ + K +VI G ++ ++ AW + + ++ D Sbjct: 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDV---AWHLLHESLFGSVADDQ 254 Query: 253 -LHFWDLRS---MKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLRMLKHP 411 L WD R+ K S+ ++ AH +V+ +NP + I+AT + + LWDLR LK Sbjct: 255 KLMIWDTRNNNTSKPSHTVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK 313 Query: 412 LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 L H + V+ +P + ++ S+GTD +++W L+K+G + S Sbjct: 314 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 359 Score = 45.1 bits (105), Expect = 2e-04 Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 18/141 (12%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVIS-QGSADMLPNLRGG 201 +D HT ++ C+ + P + D+ + LW D N K+ S + D + ++ Sbjct: 273 VDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQ-- 328 Query: 202 AWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDYN 330 W PHN +A+ TD LH WDL + + E A I D +N Sbjct: 329 -WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 387 Query: 331 PKKQNIIATAEDEFGIRLWDL 393 P + II + ++ +++W + Sbjct: 388 PNEPWIICSVSEDNIMQVWQM 408 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 11/76 (14%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLP-----------GHSHWTWAVRHNPEY 471 Y P+ +IAT + ++D KHP K P GH + + NP Sbjct: 136 YMPQNACVIATKTPSSDVLVFDYT--KHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNL 193 Query: 472 DELILSAGTDSAVNLW 519 + +LSA D + LW Sbjct: 194 NGYLLSASDDHTICLW 209
>HAT2_USTMA (Q4P553) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 485 Score = 67.4 bits (163), Expect = 4e-11 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 9/171 (5%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN---LRGGAWDPHNHNAV 231 W PL + L + +D + W+I+ K + Q SA + + AW H+ + Sbjct: 249 WSPLKQGHILAASEDTTVCHWDINNYTKPNNTL-QPSATYTGHTAIVEDVAWHNHHESLF 307 Query: 232 ATITDS-SLHFWDLRSMKRSNAIE-HAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLR 396 ++ D L WD+R + AH +V+ ++P+ +NI+ T + + +WDLR Sbjct: 308 GSVGDDRQLLIWDIREPASAPKYRVEAHTGEVNALAFSPENENILVTGSSDKSVGVWDLR 367 Query: 397 MLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 LK L L H+ +V +P + ++ SA D VNLW L+K+G + + Sbjct: 368 NLKVKLHSLESHTDEILSVCWSPHHATVLASASADRRVNLWDLSKIGQEQT 418 Score = 51.2 bits (121), Expect = 3e-06 Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 19/193 (9%) Frame = +1 Query: 34 HTDKIRCVLWWPLGKHDKLISI--DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAW 207 HT + V W H+ L DDR + +W+I + K + + L A+ Sbjct: 290 HTAIVEDVAWH--NHHESLFGSVGDDRQLLIWDIREPASAPKYRVEAHTGEVNAL---AF 344 Query: 208 DPHNHNAVAT-ITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQNIIATAEDEFG 375 P N N + T +D S+ WDLR++K +H I V ++P ++A+A + Sbjct: 345 SPENENILVTGSSDKSVGVWDLRNLKVKLHSLESHTDEILSVCWSPHHATVLASASADRR 404 Query: 376 IRLWDLRMLKHP-----LKDLP--------GHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 + LWDL + +D P GH+ + +P + + SA D+ V + Sbjct: 405 VNLWDLSKIGQEQTPDDAEDGPPELIFVHGGHTSRPTDLAWSPHMEWALTSAAEDNIVMV 464 Query: 517 WLAKVGSDDSGPE 555 W D+G E Sbjct: 465 WRPSKAVIDTGNE 477 Score = 30.4 bits (67), Expect = 4.8 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 11/92 (11%) Frame = +1 Query: 13 QLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNL 192 +L +L+ HTD+I V W P + DR + LW D S + + D P L Sbjct: 372 KLHSLESHTDEILSVCWSPHHATVLASASADRRVNLW--DLSKIGQEQTPDDAEDGPPEL 429 Query: 193 ---RGG--------AWDPHNHNAVATITDSSL 255 GG AW PH A+ + + ++ Sbjct: 430 IFVHGGHTSRPTDLAWSPHMEWALTSAAEDNI 461
>PRW1_SCHPO (O14021) RbAp48-related WD40-repeat protein prw1| Length = 431 Score = 65.1 bits (157), Expect = 2e-10 Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 11/195 (5%) Frame = +1 Query: 7 LEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKS--AKVISQGSADM 180 L+ + L HT V W L K + D + W+++ N+S A V+ + Sbjct: 174 LKPKYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSH 233 Query: 181 LPNLRGGAWDPHNHNAVATIT-DSSLHFWDLR----SMKRSNAIEHAH---IRDVDYNPK 336 + + + + +A+++ D LH D+R S K + ++ HAH I V +NP Sbjct: 234 EKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSV-HAHSGPIHSVAFNPH 292 Query: 337 KQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 I+AT + I LWDLR L L L GH + +P + ++ S D + Sbjct: 293 NDFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLV 352 Query: 517 W-LAKVGSDDSGPES 558 W L+++G D E+ Sbjct: 353 WDLSRIGEDQPAEEA 367 Score = 43.5 bits (101), Expect = 5e-04 Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 17/147 (11%) Frame = +1 Query: 130 DPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHA 306 D S K A+ + S + A++PHN +AT TD ++ WDLR++ + Sbjct: 268 DASTKPARSVHAHSGP----IHSVAFNPHNDFILATCSTDKTIALWDLRNLNQRLHTLEG 323 Query: 307 H---IRDVDYNPKKQNIIATAEDEFGIRLWDLRML-----KHPLKDLP--------GHSH 438 H + + ++P ++ I+A+ + +WDL + +D P GH+ Sbjct: 324 HEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQDGPPELLFMHGGHTS 383 Query: 439 WTWAVRHNPEYDELILSAGTDSAVNLW 519 T + P Y+ + +A D+ + +W Sbjct: 384 CTIDMDWCPNYNWTMATAAEDNILQIW 410
>MSI2_ARATH (O22468) WD-40 repeat protein MSI2| Length = 415 Score = 64.3 bits (155), Expect = 3e-10 Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 9/169 (5%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNID--PSNK--SAKVISQGSADMLPNLRGGAWDPHNHNA 228 W P + L D+ I LW++ P +K +A + +G + ++ +W N N Sbjct: 176 WSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADV---SWHMKNENL 232 Query: 229 VATI-TDSSLHFWDLRSMKRSNAIEHAHIRDVDY---NPKKQNIIATAEDEFGIRLWDLR 396 + D L WD R+ + + ++ H R+V+Y NP + ++ATA + + L+DLR Sbjct: 233 FGSAGEDGRLVIWDTRTNQMQHQVK-VHEREVNYLSFNPFNEWVLATASSDSTVALFDLR 291 Query: 397 MLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSD 540 L PL + H + V +P ++ ++ S+G D + +W L +VG + Sbjct: 292 KLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEE 340
>Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800| Length = 1258 Score = 62.8 bits (151), Expect = 9e-10 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 3/171 (1%) Frame = +1 Query: 31 DHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWD 210 +HTD + V++ P GK S D + LWNI + + K +S+ S +L G AW Sbjct: 1018 EHTDWVYAVVFHPQGKIIATGSADC-TVKLWNIS-TGQCLKTLSEHSDKIL----GMAWS 1071 Query: 211 PHNHNAVATITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQNIIATAEDEFGIR 381 P + D S+ WD + R I H + ++P + IIAT + ++ Sbjct: 1072 PDGQLLASASADQSVRLWDCCT-GRCVGILRGHSNRVYSAIFSPNGE-IIATCSTDQTVK 1129 Query: 382 LWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 +WD + K LK L GH++W + + +P+ +++ SA D V +W G Sbjct: 1130 IWDWQQGKC-LKTLTGHTNWVFDIAFSPD-GKILASASHDQTVRIWDVNTG 1178 Score = 49.7 bits (117), Expect = 8e-06 Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 3/176 (1%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR 195 L L +H+DKI + W P G+ S D+++ LW D I +G ++ + Sbjct: 1055 LKTLSEHSDKILGMAWSPDGQLLASASA-DQSVRLW--DCCTGRCVGILRGHSN---RVY 1108 Query: 196 GGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIE-HAH-IRDVDYNPKKQNIIATAEDE 369 + P+ TD ++ WD + K + H + + D+ ++P + I+A+A + Sbjct: 1109 SAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGK-ILASASHD 1167 Query: 370 FGIRLWDLRMLK-HPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 +R+WD+ K H + GH+H +V +P+ E++ S D V +W K G Sbjct: 1168 QTVRIWDVNTGKCHHI--CIGHTHLVSSVAFSPD-GEVVASGSQDQTVRIWNVKTG 1220 Score = 44.7 bits (104), Expect = 2e-04 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 2/113 (1%) Frame = +1 Query: 202 AWDPHNHNAVATITDSSLHFWDLRSMKRSNAI--EHAHIRDVDYNPKKQNIIATAEDEFG 375 A+ P D S+ W+ R+ + A V ++P +Q I+A+ ++ Sbjct: 901 AFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQ-ILASGSNDKT 959 Query: 376 IRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 ++LWD + K+ + L GH+ + + + +P+ + + SA TDS+V LW G Sbjct: 960 VKLWDWQTGKY-ISSLEGHTDFIYGIAFSPD-SQTLASASTDSSVRLWNISTG 1010 Score = 43.5 bits (101), Expect = 5e-04 Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 4/144 (2%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVIS--QGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLR 273 +D+ + LW+ ++ K IS +G D + G A+ P + + TDSS+ W++ Sbjct: 956 NDKTVKLWDW----QTGKYISSLEGHTDFI---YGIAFSPDSQTLASASTDSSVRLWNIS 1008 Query: 274 SMKRSN-AIEHAH-IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTW 447 + + +EH + V ++P+ + IIAT + ++LW++ LK L HS Sbjct: 1009 TGQCFQILLEHTDWVYAVVFHPQGK-IIATGSADCTVKLWNI-STGQCLKTLSEHSDKIL 1066 Query: 448 AVRHNPEYDELILSAGTDSAVNLW 519 + +P+ +L+ SA D +V LW Sbjct: 1067 GMAWSPD-GQLLASASADQSVRLW 1089 Score = 42.0 bits (97), Expect = 0.002 Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 2/175 (1%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR 195 L L HTD +RCV + P G + S D I LW++ K + + + +R Sbjct: 761 LQTLTGHTDWVRCVAFSPDG-NTLASSAADHTIKLWDVS-QGKCLRTLKSHTG----WVR 814 Query: 196 GGAWDPHNHNAVATITDSSLHFWDLRSMK-RSNAIEHAH-IRDVDYNPKKQNIIATAEDE 369 A+ + D ++ W+ + + I H + + + Y+P + +++ + D Sbjct: 815 SVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDR 874 Query: 370 FGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 I+LWD + +K L GH++ +V +P+ + + D +V LW + G Sbjct: 875 -TIKLWDCQ-THICIKTLHGHTNEVCSVAFSPD-GQTLACVSLDQSVRLWNCRTG 926 Score = 38.5 bits (88), Expect = 0.017 Identities = 23/76 (30%), Positives = 42/76 (55%) Frame = +1 Query: 307 HIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELIL 486 +I ++P+ Q ++AT + + +R+W+++ K L GHS+W V +P+ E++ Sbjct: 644 NILSAAFSPEGQ-LLATCDTDCHVRVWEVKSGKL-LLICRGHSNWVRFVVFSPD-GEILA 700 Query: 487 SAGTDSAVNLWLAKVG 534 S G D V LW + G Sbjct: 701 SCGADENVKLWSVRDG 716
>MSI3_ARATH (O22469) WD-40 repeat protein MSI3| Length = 424 Score = 62.4 bits (150), Expect = 1e-09 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 11/172 (6%) Frame = +1 Query: 58 LWWPLGKHDKLIS-IDDRNIFLWNIDPSNKSAKVIS-----QGSADMLPNLRGGAWDPHN 219 L W K L+S D+ I LW++ + + KV++ +G ++ ++ AW N Sbjct: 175 LAWSSFKEGYLLSGSQDQRICLWDVS-ATATDKVLNPMHVYEGHQSIIEDV---AWHMKN 230 Query: 220 HNAVATITDS-SLHFWDLRSMKRSNAIEHAHIRDVDY---NPKKQNIIATAEDEFGIRLW 387 N + D L WDLR+ + + ++ H R+++Y NP + ++ATA + + L+ Sbjct: 231 ENIFGSAGDDCQLVIWDLRTNQMQHQVK-VHEREINYLSFNPFNEWVLATASSDSTVALF 289 Query: 388 DLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSD 540 DLR L PL L H + V +P ++ ++ S+G D + +W + +VG + Sbjct: 290 DLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDE 341
>HAT2_CANGA (Q6FXI8) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 419 Score = 61.6 bits (148), Expect = 2e-09 Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 9/189 (4%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAK---VISQGSADMLP 186 L L+ HT+ + + K+ L DD NI LW+I K+ K D++ Sbjct: 172 LSTLEYHTENGYGLAFNANEKYSLLSGSDDSNIALWDISNFEKNIKPTITFEDAHTDIIN 231 Query: 187 NLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYN-----PKKQNII 351 +++ + + H +V+ DS++ +D KRS+ I H YN P N+ Sbjct: 232 DVKWHSSEAHIFGSVSE--DSTMKLFD----KRSSQIIHNINTKKPYNTLAFSPFSSNLF 285 Query: 352 ATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAK 528 A A + + L+D+R + +PL + GH A+ +P D ++ S+G+D +W L + Sbjct: 286 AAAGTDNLVYLYDIRDVSNPLYAMTGHEDAVTAIEFDPNNDGILYSSGSDRRTIVWDLQE 345 Query: 529 VGSDDSGPE 555 +G++ + E Sbjct: 346 IGAEQTQDE 354 Score = 36.2 bits (82), Expect = 0.087 Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 17/181 (9%) Frame = +1 Query: 28 DDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAW 207 D HTD I V W H +D + L++ +S+++I + N A+ Sbjct: 224 DAHTDIINDVKWHSSEAHIFGSVSEDSTMKLFD----KRSSQIIHNINTKKPYNTL--AF 277 Query: 208 DPHNHNAVATI-TDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQNIIATAEDEFG 375 P + N A TD+ ++ +D+R + H + ++++P I+ ++ + Sbjct: 278 SPFSSNLFAAAGTDNLVYLYDIRDVSNPLYAMTGHEDAVTAIEFDPNNDGILYSSGSDRR 337 Query: 376 IRLWDLRML-----KHPLKDLP--------GHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 +WDL+ + + ++D P GH + NP + L+ SA D+ V + Sbjct: 338 TIVWDLQEIGAEQTQDEIEDGPPEVLMIHAGHKTSINDIAVNPNINWLVASAEEDNIVQI 397 Query: 517 W 519 W Sbjct: 398 W 398
>RBA1_CAEEL (P90917) Probable histone-binding protein rba-1| Length = 412 Score = 58.9 bits (141), Expect = 1e-08 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 2/104 (1%) Frame = +1 Query: 214 HNHNAVATITDSSLHFWDLRSMK-RSNAIEH-AHIRDVDYNPKKQNIIATAEDEFGIRLW 387 HN + D L+ WDLR K + A+ H A + + +NP + I+AT + + LW Sbjct: 233 HNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALW 292 Query: 388 DLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 D+R ++ + L H+ + V +P Y+ ++ S+G+D V +W Sbjct: 293 DMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVW 336 Score = 34.3 bits (77), Expect = 0.33 Identities = 18/72 (25%), Positives = 32/72 (44%) Frame = +1 Query: 304 AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELI 483 ++ DV ++ + + D+ + LWDLR K P GH+ + NP + ++ Sbjct: 222 SNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSK-PQLTAVGHTAEVNCITFNPFSEYIL 280 Query: 484 LSAGTDSAVNLW 519 + D V LW Sbjct: 281 ATGSVDKTVALW 292 Score = 30.0 bits (66), Expect = 6.2 Identities = 20/139 (14%), Positives = 57/139 (41%), Gaps = 19/139 (13%) Frame = +1 Query: 34 HTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDP 213 HT ++ C+ + P ++ D+ + LW++ K + + ++ ++ P Sbjct: 263 HTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQ----VSFSP 318 Query: 214 HNHNAVATI-TDSSLHFWDLRSMKRSNAIEHA------------------HIRDVDYNPK 336 H +A+ +D + WD+ ++ ++ A + D +NP Sbjct: 319 HYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPN 378 Query: 337 KQNIIATAEDEFGIRLWDL 393 + I ++++ +++W++ Sbjct: 379 RPWTICSSDEFNALQVWEV 397
>PRP4_ARATH (O22212) U4/U6 small nuclear ribonucleoprotein PRP4-like protein| Length = 554 Score = 58.5 bits (140), Expect = 2e-08 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 3/171 (1%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR 195 L + H D++ V + P GK+ S D + LW+I N A+++ Q ++ Sbjct: 332 LQTFEGHLDRLARVAFHPSGKYLGTTSYD-KTWRLWDI---NTGAELLLQEGHSR--SVY 385 Query: 196 GGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIR---DVDYNPKKQNIIATAED 366 G A+ A + DS WDLR+ RS + HI+ V+++P ++ + ED Sbjct: 386 GIAFQQDGALAASCGLDSLARVWDLRT-GRSILVFQGHIKPVFSVNFSPNGYHLASGGED 444 Query: 367 EFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 R+WDLRM K L +P H++ V++ P+ + +A D VN+W Sbjct: 445 N-QCRIWDLRMRKS-LYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW 493 Score = 40.8 bits (94), Expect = 0.004 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQNIIATAEDEFG 375 + P+ ++ + D+ WDLR M++S I AH + V Y P++ +ATA + Sbjct: 431 FSPNGYHLASGGEDNQCRIWDLR-MRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMK 489 Query: 376 IRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSDDSGPE 555 + +W R +K L GH ++ + I + D + LW + G+DD E Sbjct: 490 VNIWSGRDFS-LVKSLAGHESKVASLDITAD-SSCIATVSHDRTIKLWTSS-GNDDEDEE 546
>HAT2_ASPFU (Q4WEI5) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 436 Score = 56.2 bits (134), Expect = 8e-08 Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 9/193 (4%) Frame = +1 Query: 4 QLEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVI--SQGSAD 177 Q+ L HT + + W P +D+ + +W++ +K K++ S+ Sbjct: 178 QVNPQMELIGHTKEGFGLSWSPHTAGQLATGSEDKTVRIWDLTTYSKGNKLLKPSRTYTH 237 Query: 178 MLPNLRGGAWDPHNHNAVATITDS-SLHFWDLRSMKRSNAI---EHAH---IRDVDYNPK 336 + + P + + + T++D +L D+R + + A E H I + +NP Sbjct: 238 HSSIVNDVQYHPLHSSLIGTVSDDITLQILDIRESETTRAAASTEGQHRDAINAIAFNPA 297 Query: 337 KQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 + ++AT + I LWDLR LK L L H+ ++ +P + ++ SA D + Sbjct: 298 AETVLATGSADKTIGLWDLRNLKTKLHSLESHTDSVTSISWHPFEEAVLASASYDRKIAF 357 Query: 517 WLAKVGSDDSGPE 555 W ++ PE Sbjct: 358 WDLSRAGEEQTPE 370 Score = 30.0 bits (66), Expect = 6.2 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 10/85 (11%) Frame = +1 Query: 295 IEH-AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKH---------PLKDLPGHSHWT 444 I+H + Y P+ NIIAT + + +WD KH P +L GH+ Sbjct: 135 IDHKGEVNKARYQPQNPNIIATMCTDGRVMVWD--RSKHPSLPTGQVNPQMELIGHTKEG 192 Query: 445 WAVRHNPEYDELILSAGTDSAVNLW 519 + + +P + + D V +W Sbjct: 193 FGLSWSPHTAGQLATGSEDKTVRIW 217
>PEX7_MOUSE (P97865) Peroxisomal targeting signal 2 receptor (PTS2 receptor)| (Peroxin-7) Length = 318 Score = 55.5 bits (132), Expect = 1e-07 Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 4/167 (2%) Frame = +1 Query: 31 DHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAW 207 +HT ++ V W ++S D+ + +W DP+ ++ +G ++ + W Sbjct: 104 EHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVW--DPTVGNSLCTFRGHESVIYST---IW 158 Query: 208 DPHNHNAVATIT-DSSLHFWDLRSMKRSNAI--EHAHIRDVDYNPKKQNIIATAEDEFGI 378 PH A+ + D +L WD+++ I I D+ +N++ T + + Sbjct: 159 SPHIPGCFASASGDQTLRIWDVKTTGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSL 218 Query: 379 RLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 R WDLR ++ P+ +L GH++ V+ +P + ++ S D V W Sbjct: 219 RGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 265 Score = 35.0 bits (79), Expect = 0.19 Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +1 Query: 316 DVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVR-HNPEYDELILSA 492 DV ++ ++++ T + ++LWD PL+ H+ ++V ++L++S Sbjct: 67 DVTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSG 126 Query: 493 GTDSAVNLWLAKVGS 537 D V +W VG+ Sbjct: 127 SWDQTVKVWDPTVGN 141
>PEX7_CRIGR (Q8R537) Peroxisomal targeting signal 2 receptor (PTS2 receptor)| (Peroxin-7) Length = 318 Score = 55.5 bits (132), Expect = 1e-07 Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 4/167 (2%) Frame = +1 Query: 31 DHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAW 207 +HT ++ V W ++S D+ + +W DP+ ++ +G ++ + W Sbjct: 104 EHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVW--DPTVGNSLCTFRGHESVIYST---IW 158 Query: 208 DPHNHNAVATIT-DSSLHFWDLRSMKRSNAI--EHAHIRDVDYNPKKQNIIATAEDEFGI 378 PH A+ + D +L WD+++ I I D+ +N++ T + + Sbjct: 159 SPHIPGCFASASGDQTLRIWDVKTAGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSL 218 Query: 379 RLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 R WDLR ++ P+ +L GH++ V+ +P + ++ S D V W Sbjct: 219 RGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 265 Score = 34.7 bits (78), Expect = 0.25 Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +1 Query: 316 DVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVR-HNPEYDELILSA 492 DV ++ ++++ T + ++LWD PL+ H+ ++V ++L++S Sbjct: 67 DVTWSEDNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSG 126 Query: 493 GTDSAVNLWLAKVGS 537 D V +W VG+ Sbjct: 127 SWDQTVKVWDPTVGN 141
>HAT2_KLULA (Q6CSI1) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 408 Score = 55.5 bits (132), Expect = 1e-07 Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 4/155 (2%) Frame = +1 Query: 88 LISIDDRNIFLWNI-DPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATIT-DSSLHF 261 L + DD + LW++ +NKS D++ + + W + T++ D++L Sbjct: 186 LSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCK---WHEFQSSLFGTVSEDNTLII 242 Query: 262 WDLRSMKRSNAIE-HAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSH 438 D S + + + + ++ + +N++A A + + L+DLR L+ PL + GH Sbjct: 243 HDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHED 302 Query: 439 WTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSD 540 ++ +P D L+ S+G+D + +W L +G++ Sbjct: 303 SVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAE 337
>MSI1_ARATH (O22467) WD-40 repeat protein MSI1 (Protein MULTICOPY SUPPRESSOR OF| IRA 1) (Protein medicis) Length = 424 Score = 55.5 bits (132), Expect = 1e-07 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 11/165 (6%) Frame = +1 Query: 58 LWWPLGKHDKLIS-IDDRNIFLWNID--PSNKS--AKVISQGSADMLPNLRGGAWDPHNH 222 L W K L+S DD I LW+I+ P NKS A+ I + ++ ++ AW + Sbjct: 184 LSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDV---AWHLRHE 240 Query: 223 NAVATITDSS-LHFWDLRSMKRSNAIEH--AHIRDVD---YNPKKQNIIATAEDEFGIRL 384 ++ D L WDLRS S ++ AH +V+ +NP + ++AT + ++L Sbjct: 241 YLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKL 300 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 +DLR L L H + V NP+ + ++ S + +W Sbjct: 301 FDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345 Score = 42.0 bits (97), Expect = 0.002 Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 17/157 (10%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVAT-ITDSSLHFWDLRS 276 DD+ + +W++ + S V S + M N A++P N VAT TD ++ +DLR Sbjct: 248 DDQYLLIWDLRSPSASKPVQSVVAHSMEVNCL--AFNPFNEWVVATGSTDKTVKLFDLRK 305 Query: 277 MKRSNAIEHAH---IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLK-----HPLKDLP-- 426 + + +H + V +NPK + I+A+ + +WDL + +D P Sbjct: 306 LSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPE 365 Query: 427 ------GHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 GH+ NP D +I S D+ + +W Sbjct: 366 LLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
>PEX7_HUMAN (O00628) Peroxisomal targeting signal 2 receptor (PTS2 receptor)| (Peroxin-7) Length = 323 Score = 55.5 bits (132), Expect = 1e-07 Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 4/167 (2%) Frame = +1 Query: 31 DHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAW 207 +H ++ V W ++S D+ + LW DP+ + +G ++ + W Sbjct: 109 EHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLW--DPTVGKSLCTFRGHESIIYST---IW 163 Query: 208 DPHNHNAVATIT-DSSLHFWDLRSMKRSNAI--EHAHIRDVDYNPKKQNIIATAEDEFGI 378 PH A+ + D +L WD+++ I A I D+ +N++ T + + Sbjct: 164 SPHIPGCFASASGDQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSL 223 Query: 379 RLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 R WDLR ++ P+ +L GH++ V+ +P + ++ S D V W Sbjct: 224 RGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 270 Score = 35.4 bits (80), Expect = 0.15 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = +1 Query: 316 DVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVR-HNPEYDELILSA 492 DV ++ ++++ T + ++LWD PL+ H+ ++V ++L++S Sbjct: 72 DVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSG 131 Query: 493 GTDSAVNLWLAKVG 534 D V LW VG Sbjct: 132 SWDQTVKLWDPTVG 145
>HAT2_ASPOR (Q2UA71) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 436 Score = 54.7 bits (130), Expect = 2e-07 Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 9/183 (4%) Frame = +1 Query: 34 HTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVI--SQGSADMLPNLRGGAW 207 HT + + W P + +D+ + LW++ K K + S+ + + Sbjct: 188 HTKEGFGLSWSPHTAGHLVTGSEDKTVRLWDLTTYTKGNKALKPSRTYTHHSSIVNDVQY 247 Query: 208 DPHNHNAVATITDS-SLHFWDLRSMKRSNAIEHAH------IRDVDYNPKKQNIIATAED 366 P + + + T++D +L D+R + + A A I + +NP + ++AT Sbjct: 248 HPLHSSLIGTVSDDITLQILDIREAETTRAAASAEGQHRDAINAIAFNPAAETVLATGSA 307 Query: 367 EFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSDDS 546 + I LWDLR LK L L H+ ++ +P + ++ SA D + W ++ Sbjct: 308 DKSIGLWDLRNLKTKLHTLECHTDSVTSLSWHPFEESVLASASYDRKIMFWDLSRSGEEQ 367 Query: 547 GPE 555 P+ Sbjct: 368 TPD 370 Score = 31.2 bits (69), Expect = 2.8 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 10/85 (11%) Frame = +1 Query: 295 IEH-AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKH---------PLKDLPGHSHWT 444 I+H + Y P+ N+IAT + + +WD KH P +L GH+ Sbjct: 135 IDHKGEVNKARYQPQNPNVIATMCTDGRVMIWD--RSKHPSLPTGTVNPQMELLGHTKEG 192 Query: 445 WAVRHNPEYDELILSAGTDSAVNLW 519 + + +P +++ D V LW Sbjct: 193 FGLSWSPHTAGHLVTGSEDKTVRLW 217
>HAT2_YARLI (Q6C7Q4) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 452 Score = 54.3 bits (129), Expect = 3e-07 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 4/109 (3%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAI---EHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPL 414 D +L WD R A E I +D+NP + ++AT + +++WD+R + P+ Sbjct: 280 DCTLRLWDTRKPGNKAACTIKESRGINSLDFNPHSEFLVATGSADETVKVWDMRKMDTPI 339 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDSGPES 558 L H V+ P ++ S G D A+ +W +A++ D S E+ Sbjct: 340 SQLYSHCDEVTKVQWCPHQPSVLASGGHDRAILVWDIARLHDDLSSDEN 388
>MSI1_LYCES (O22466) WD-40 repeat protein MSI1| Length = 424 Score = 54.3 bits (129), Expect = 3e-07 Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 14/180 (7%) Frame = +1 Query: 58 LWWPLGKHDKLIS-IDDRNIFLWNID--PSNKSAKV-----ISQGSADMLPNLRGGAWDP 213 L W K L+S DD +I LW+I+ P NK+ + + +G + + AW Sbjct: 184 LSWSQFKQGHLLSGSDDSHICLWDINATPKNKALEAMQIFKVHEGVVEDV------AWHL 237 Query: 214 HNHNAVATITDSS-LHFWDLRSMKRSNAIEH--AHIRDVD---YNPKKQNIIATAEDEFG 375 + ++ D LH WDLR+ + I+ AH +V+ +NP + ++AT + Sbjct: 238 RHEYLFGSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKT 297 Query: 376 IRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSDDSGPE 555 ++L+DLR + L L H + V NP+ + ++ S + +W ++ PE Sbjct: 298 VKLFDLRKISTALHTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357 Score = 30.4 bits (67), Expect = 4.8 Identities = 26/150 (17%), Positives = 57/150 (38%), Gaps = 18/150 (12%) Frame = +1 Query: 34 HTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDP 213 H ++ C+ + P + D+ + L+++ + + + ++ W+P Sbjct: 272 HQSEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKISTALHTLDCHKEEVFQV----GWNP 327 Query: 214 HNHNAVATIT-DSSLHFWDLRSMKRSNAIEHAH----------------IRDVDYNPKKQ 342 N +A+ L WDL + E A I D +NP + Sbjct: 328 KNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCED 387 Query: 343 NIIATAEDEFGIRLWDL-RMLKHPLKDLPG 429 ++A+ ++ +++W + + H DLPG Sbjct: 388 WVVASVAEDNILQIWQMAENIYHDEDDLPG 417
>HAT2_ASHGO (Q75C99) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 423 Score = 53.9 bits (128), Expect = 4e-07 Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 4/153 (2%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATIT-DSSLHFWDLR- 273 DD + LW+I+ + K +++ D++ +++ W N T++ D +L D R Sbjct: 207 DDTTVALWDIEAAKKPKSILTSHD-DIVNDVK---WHEFESNVFGTVSEDKTLQVHDKRV 262 Query: 274 SMKRSNAIEHAH-IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWA 450 ++ + A + ++ +N++A A + I L+D+R + PL + GH Sbjct: 263 RLEPVKKLPTASPFNTLSFSKHSRNLLAAAGVDSQIYLYDMRDMSSPLHVMSGHQDSVTT 322 Query: 451 VRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 V +P D +I S+G+D +W L ++G++ S Sbjct: 323 VEFSPHTDGIICSSGSDRRAIIWDLTQIGAEQS 355 Score = 33.1 bits (74), Expect = 0.73 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 5/76 (6%) Frame = +1 Query: 307 HIRDV---DYNPKKQNIIATAEDEFGIRLWD--LRMLKHPLKDLPGHSHWTWAVRHNPEY 471 HI +V Y P NIIAT + I ++D L K + L H + + NP Sbjct: 139 HIEEVIRARYMPANSNIIATINGKGTISIFDRTLEESKAQVSTLAFHKENGYGLAFNPHI 198 Query: 472 DELILSAGTDSAVNLW 519 +LS D+ V LW Sbjct: 199 SGELLSGSDDTTVALW 214
>HAT2_SCHPO (O94244) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 430 Score = 53.5 bits (127), Expect = 5e-07 Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 22/202 (10%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDP---SNKSAKVIS-----QGSADM 180 L HT + + W P + +D+ I LW++ ++ KVIS D+ Sbjct: 178 LKGHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDI 237 Query: 181 LPNLRGGAWDPHNHNAVATITDS---SLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQ 342 + +++ + P + +A+++D +H L + + + AH I V NP Sbjct: 238 VNDVQ---FHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFND 294 Query: 343 NIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW- 519 ++ATA + + LWDLR L L GH + + +P + ++ S+ TD V +W Sbjct: 295 YLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWD 354 Query: 520 LAKVG-------SDDSGPESPF 564 L K+G ++D PE F Sbjct: 355 LEKIGEEQTPEDAEDGSPELLF 376 Score = 30.0 bits (66), Expect = 6.2 Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 14/99 (14%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLI---SIDDRNIFLWNIDP--SNKSAKVISQGSA 174 ++L L+ H D++ + W P HD+ I S DR + +W+++ ++ + GS Sbjct: 316 QRLHTLEGHEDEVYGLEWSP---HDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSP 372 Query: 175 DMLPNLRGG--------AWDPHNHNAVATITDSS-LHFW 264 ++L + GG +W P+ V ++ D + L W Sbjct: 373 ELL-FMHGGHTNRISEFSWCPNERWVVGSLADDNILQIW 410
>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466| Length = 1526 Score = 53.1 bits (126), Expect = 7e-07 Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 2/170 (1%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR 195 L+ L HT+ + V + P G D+ + LW+I S+ I QG + ++ Sbjct: 1151 LYTLQGHTNWVNAVAFSPDGA-TLASGSGDQTVRLWDI--SSSKCLYILQGHTSWVNSV- 1206 Query: 196 GGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEH--AHIRDVDYNPKKQNIIATAEDE 369 ++P + +D ++ W++ S K + + + V +NP +++A+ + Sbjct: 1207 --VFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDG-SMLASGSSD 1263 Query: 370 FGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 +RLWD+ K L GH++W +V NP+ ++ S D V LW Sbjct: 1264 KTVRLWDISSSKC-LHTFQGHTNWVNSVAFNPD-GSMLASGSGDQTVRLW 1311 Score = 42.4 bits (98), Expect = 0.001 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 2/142 (1%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSM 279 DD+ + LW+I N + S +R + P + D + WD+ S Sbjct: 1052 DDQTVRLWDISSGNCLYTLQGHTSC-----VRSVVFSPDGAMLASGGDDQIVRLWDISSG 1106 Query: 280 KRSNAIEH--AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAV 453 ++ + +R + ++P + + D+ +RLWD+ K L L GH++W AV Sbjct: 1107 NCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQI-VRLWDISS-KKCLYTLQGHTNWVNAV 1164 Query: 454 RHNPEYDELILSAGTDSAVNLW 519 +P+ L +G D V LW Sbjct: 1165 AFSPDGATLASGSG-DQTVRLW 1185 Score = 36.6 bits (83), Expect = 0.066 Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 6/168 (3%) Frame = +1 Query: 34 HTDKIRCVLWWPLGKHDKLI---SIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 HT ++R V++ P + L+ D+ + LW+I S+ I QG + ++ A Sbjct: 947 HTSRVRSVVFSP----NSLMLASGSSDQTVRLWDI--SSGECLYIFQGHTGWVYSV---A 997 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQNIIATAEDEFG 375 ++ D ++ WD+ S + I H +R V ++ ++A+ D+ Sbjct: 998 FNLDGSMLATGSGDQTVRLWDISS-SQCFYIFQGHTSCVRSVVFSSDGA-MLASGSDDQT 1055 Query: 376 IRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 +RLWD+ + L L GH+ +V +P+ ++ S G D V LW Sbjct: 1056 VRLWDISS-GNCLYTLQGHTSCVRSVVFSPD-GAMLASGGDDQIVRLW 1101 Score = 30.0 bits (66), Expect = 6.2 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAG-TDSAVNLW 519 ++A+ D+ +RLWD+ LK GH+ +V +P + L+L++G +D V LW Sbjct: 920 MLASGSDDQTVRLWDISS-GQCLKTFKGHTSRVRSVVFSP--NSLMLASGSSDQTVRLW 975
>HAT2_GIBZE (Q4I7L0) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 423 Score = 52.4 bits (124), Expect = 1e-06 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 22/192 (11%) Frame = +1 Query: 34 HTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPS--NKSAKVISQGSADMLPNLRGGAW 207 HT + V + P+ K+ DD+ + + +I S NK+A V +G D + L A+ Sbjct: 225 HTQIVNDVQYHPISKNFIGSVSDDQTLQIVDIRHSETNKAAVVAKRGHLDAINAL---AF 281 Query: 208 DPHNHNAVATIT-DSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQNIIATAEDEFG 375 +P++ VAT + D ++ WDLR++K H + + ++P + I+ +A + Sbjct: 282 NPNSEVLVATASADKTIGIWDLRNVKEKVHTLEGHNDAVTSLAWHPTEAGILGSASYDRR 341 Query: 376 IRLWDL-----RMLKHPLKDLP--------GHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 I WDL L D P GH++ NP L+ SA D+ + + Sbjct: 342 IIFWDLSRVGEEQLPDDQDDGPPELLFMHGGHTNHLADFSWNPNEPWLVASAAEDNLLQI 401 Query: 517 WLAK---VGSDD 543 W VG DD Sbjct: 402 WKVAESIVGKDD 413 Score = 48.9 bits (115), Expect = 1e-05 Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 17/172 (9%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVI--SQGSADMLPNLRGGAWDPHNHNAVATITDS-SLHFWDL 270 +D + LW++ ++++ S+ + + P + N + +++D +L D+ Sbjct: 197 EDTTMRLWDLKTLKADSRILNPSRTYRHHTQIVNDVQYHPISKNFIGSVSDDQTLQIVDI 256 Query: 271 RSMKRSNAI---EHAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGH 432 R + + A + H+ ++ +NP + ++ATA + I +WDLR +K + L GH Sbjct: 257 RHSETNKAAVVAKRGHLDAINALAFNPNSEVLVATASADKTIGIWDLRNVKEKVHTLEGH 316 Query: 433 SHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVG-------SDDSGPESPF 564 + ++ +P ++ SA D + W L++VG DD PE F Sbjct: 317 NDAVTSLAWHPTEAGILGSASYDRRIIFWDLSRVGEEQLPDDQDDGPPELLF 368 Score = 33.5 bits (75), Expect = 0.56 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 19/123 (15%) Frame = +1 Query: 205 WDPHNHNAVAT--------ITDSSLHFWDLRSMKRSNA----IEH-AHIRDVDYNPKKQN 345 + P N + +AT I D + H D S + NA + H A +++NP ++ Sbjct: 131 YQPQNPDILATLCVDGKILIFDRTKHPLDPTSTGKVNAQIELVGHEAEGFGLNWNPHEEG 190 Query: 346 IIATAEDEFGIRLWDLRMLK------HPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSA 507 +A+ ++ +RLWDL+ LK +P + H+ V+++P I S D Sbjct: 191 CLASGSEDTTMRLWDLKTLKADSRILNPSRTYRHHTQIVNDVQYHPISKNFIGSVSDDQT 250 Query: 508 VNL 516 + + Sbjct: 251 LQI 253 Score = 32.7 bits (73), Expect = 0.96 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 12/96 (12%) Frame = +1 Query: 295 IEH-AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLK-----------DLPGHSH 438 IEH + Y P+ +I+AT + I ++D KHPL +L GH Sbjct: 120 IEHPGEVNKARYQPQNPDILATLCVDGKILIFD--RTKHPLDPTSTGKVNAQIELVGHEA 177 Query: 439 WTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSDDS 546 + + NP + + S D+ + LW K DS Sbjct: 178 EGFGLNWNPHEEGCLASGSEDTTMRLWDLKTLKADS 213
>WDR5_MOUSE (P61965) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)| (WD-repeat protein BIG-3) Length = 334 Score = 51.6 bits (122), Expect = 2e-06 Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 11/193 (5%) Frame = +1 Query: 19 FALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ---GSADMLPN 189 F L HT + V + P G+ S D+ I +W K K IS G +D+ Sbjct: 39 FTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAY-DGKFEKTISGHKLGISDV--- 93 Query: 190 LRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIE-HA-HIRDVDYNPKKQNIIATAE 363 AW ++ V+ D +L WD+ S K ++ H+ ++ ++NP+ I++ + Sbjct: 94 ----AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149 Query: 364 DEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGS-- 537 DE +R+WD++ K LK LP HS AV N + LI+S+ D +W G Sbjct: 150 DE-SVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCL 206 Query: 538 ----DDSGPESPF 564 DD P F Sbjct: 207 KTLIDDDNPPVSF 219
>WDR5_HUMAN (P61964) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)| Length = 334 Score = 51.6 bits (122), Expect = 2e-06 Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 11/193 (5%) Frame = +1 Query: 19 FALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ---GSADMLPN 189 F L HT + V + P G+ S D+ I +W K K IS G +D+ Sbjct: 39 FTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAY-DGKFEKTISGHKLGISDV--- 93 Query: 190 LRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIE-HA-HIRDVDYNPKKQNIIATAE 363 AW ++ V+ D +L WD+ S K ++ H+ ++ ++NP+ I++ + Sbjct: 94 ----AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149 Query: 364 DEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGS-- 537 DE +R+WD++ K LK LP HS AV N + LI+S+ D +W G Sbjct: 150 DE-SVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCL 206 Query: 538 ----DDSGPESPF 564 DD P F Sbjct: 207 KTLIDDDNPPVSF 219
>GBLP_SCHPO (Q10281) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C) Length = 314 Score = 51.2 bits (121), Expect = 3e-06 Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 4/176 (2%) Frame = +1 Query: 4 QLEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADML 183 QL L+ H+ + + P L D++I LWN+ + + V + Sbjct: 4 QLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHS 63 Query: 184 PNLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAI--EHAHIRDVDYNPKKQNIIAT 357 + A +H A++ D ++ WDL + ++ + + V +P + +++ Sbjct: 64 HFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSG 123 Query: 358 AEDEFGIRLWDL-RMLKHPLKDLPGHSHWTWAVRHNPEYDEL-ILSAGTDSAVNLW 519 + D+ I++W++ K+ + D GHS W VR +P D L +SAG D AV +W Sbjct: 124 SRDKT-IKIWNIIGNCKYTITD-GGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVW 177
>HAT2_CRYNE (Q5KDT9) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 435 Score = 50.8 bits (120), Expect = 3e-06 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 13/175 (7%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNI------DPSNKSAKVISQGSADMLPNLRGGAWDPHNH 222 W L + L + +D I W+I DPS + ++ + SA + W P N Sbjct: 198 WNALKEGHILSASEDTTIGHWDIQGYSKQDPSLQPLRLYTGHSA----YVADVEWHPKNE 253 Query: 223 NAVATITDSS-LHFWDLRS---MKRSNAIE--HAHIRDVDYNPKKQNIIATAEDEFGIRL 384 N +++D + WD RS K S+ ++ +A I + + P + + T + I L Sbjct: 254 NMFGSVSDDGQIMIWDTRSDNTAKASSQVQGHNAEINCISFAPSSEYLFLTGSSDNTIAL 313 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 WDLR L H++ + +P SA D V++W L +G++ + Sbjct: 314 WDLRKLSTKHHSFEAHTNDVLQLSWSPTSPVHFASASADRRVHIWDLDAIGAEQT 368 Score = 33.9 bits (76), Expect = 0.43 Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 18/137 (13%) Frame = +1 Query: 34 HTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDP 213 H +I C+ + P ++ L D I LW++ + + D+L +W P Sbjct: 285 HNAEINCISFAPSSEYLFLTGSSDNTIALWDLRKLSTKHHSFEAHTNDVLQL----SWSP 340 Query: 214 HN--HNAVATITDSSLHFWDLRSMKRSNAIEHAH----------------IRDVDYNPKK 339 + H A A+ D +H WDL ++ + A + D+ ++P Sbjct: 341 TSPVHFASAS-ADRRVHIWDLDAIGAEQTPDDAEDGPPELLFVHGGHTSKVCDISWSPSS 399 Query: 340 QNIIATAEDEFGIRLWD 390 IA+A ++ +++W+ Sbjct: 400 PWTIASASEDNILQVWE 416
>PRP46_KLULA (Q6CKE8) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 434 Score = 50.1 bits (118), Expect = 6e-06 Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 5/170 (2%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 ++ HT +RCV P+ +D I +W++ +I + ++R A Sbjct: 118 INGHTGWVRCVCVDPVDNEWFATGSNDTTIKIWDLAAGKLKITLIGH-----VMSVRDIA 172 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAH-----IRDVDYNPKKQNIIATAEDE 369 + + D + WDL +R+ AI H + VD +P +IIATA + Sbjct: 173 ISKRHPYMFSASEDKLVKCWDL---ERNTAIRDFHGHLSGVHTVDVHPSL-DIIATAGRD 228 Query: 370 FGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 +RLWD+R + + LPGH V+ P D I+S D+ V LW Sbjct: 229 AVVRLWDIRS-RSEIMVLPGHKSPINKVKCLP-VDPQIISCSGDATVRLW 276
>WSB1_HUMAN (Q9Y6I7) WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS| box-containing WD protein SWiP-1) Length = 421 Score = 50.1 bits (118), Expect = 6e-06 Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 2/96 (2%) Frame = +1 Query: 238 ITDSSLHFWDLRSMKRS-NAIEHAHI-RDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHP 411 + + + WD+ + K N ++H + RD+ + P I+ +A + +R+WDL+ + Sbjct: 147 LNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNM 206 Query: 412 LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 +K L GH +W ++ +P+ ++ S G AV LW Sbjct: 207 MKVLRGHQNWVYSCAFSPD-SSMLCSVGASKAVFLW 241 Score = 30.8 bits (68), Expect = 3.6 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 2/127 (1%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR 195 L L DHT+ +R + + P G + + D+ + +W++ KV+ +G + + + Sbjct: 163 LLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL-RGHQNWVYSC- 220 Query: 196 GGAWDPHNHNAVATITDSSLHFW--DLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAEDE 369 A+ P + + ++ W D +M R H + D++P ++ATA + Sbjct: 221 --AFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGA-LLATASYD 277 Query: 370 FGIRLWD 390 + +WD Sbjct: 278 TRVYIWD 284
>HAT2_YEAST (P39984) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 401 Score = 49.3 bits (116), Expect = 1e-05 Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 6/177 (3%) Frame = +1 Query: 34 HTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDP 213 H D + + L K L DD + LW + K + + + W Sbjct: 159 HKDNGYALSFSTLVKGRLLSGSDDHTVALWEVGSGGDPTKPVRTWNDLHSDIINDNKWHN 218 Query: 214 HNHNAVATIT-DSSLHFWDLRSMKRSNAIEHAH----IRDVDYNPKKQNIIATAEDEFGI 378 N + T++ DS L D+R+ + I+ + ++ N++A A + + Sbjct: 219 FNKDLFGTVSEDSLLKINDVRA--NNTTIDTVKCPQPFNTLAFSHHSSNLLAAAGMDSYV 276 Query: 379 RLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 L+DLR +K PL + GH + + D +++S+G+D+ + +W L ++G++ + Sbjct: 277 YLYDLRNMKEPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQT 333
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 48.9 bits (115), Expect = 1e-05 Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 22/193 (11%) Frame = +1 Query: 7 LEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRN--IFLWNID-----PSNKSAKVISQ 165 + + +H+ ++ V + K D +++ N IF+W+++ PSN + Q Sbjct: 98 INSMARFSNHSSSVKTVKF--NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ 155 Query: 166 G--SADMLPNLRGGAWDPHNHNAVATITDSSL-HFWDLRSMKRSNAIEHA--------HI 312 S D + +L AW+ + A+ S+ WDL++ K + + + Sbjct: 156 SMSSVDEVISL---AWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQL 212 Query: 313 RDVDYNPKKQNIIATA---EDEFGIRLWDLRMLKHPLKDL-PGHSHWTWAVRHNPEYDEL 480 V+++PK +ATA +++ I +WDLR PL+ L GH ++ + + L Sbjct: 213 SVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHL 272 Query: 481 ILSAGTDSAVNLW 519 +LS+G D+ V LW Sbjct: 273 LLSSGRDNTVLLW 285
>COR2B_HUMAN (Q9UQ03) Coronin-2B (Coronin-like protein C) (ClipinC) (Protein| FC96) Length = 475 Score = 48.9 bits (115), Expect = 1e-05 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Frame = +1 Query: 307 HIRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPE 468 ++ D+ +NP NIIA+ ++ +R+W++ R + L +L GHS V +P Sbjct: 84 NVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPT 143 Query: 469 YDELILSAGTDSAVNLWLAKVG 534 + ++ SAG D V +W VG Sbjct: 144 TNNILFSAGYDYKVLIWNLDVG 165
>COR2B_MOUSE (Q8BH44) Coronin-2B| Length = 475 Score = 48.5 bits (114), Expect = 2e-05 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Frame = +1 Query: 307 HIRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPE 468 ++ D+ +NP NIIA+ ++ +R+W++ R + L +L GHS V +P Sbjct: 84 NVLDIKWNPFIDNIIASCSEDTSVRIWEIPDGGLKRNMTEALLELHGHSRRVGLVEWHPT 143 Query: 469 YDELILSAGTDSAVNLWLAKVG 534 + ++ SAG D V +W +G Sbjct: 144 TNNILFSAGYDYKVLIWNLDIG 165
>GRWD1_HUMAN (Q9BQ67) Glutamate-rich WD repeat-containing protein 1| Length = 446 Score = 48.1 bits (113), Expect = 2e-05 Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 12/192 (6%) Frame = +1 Query: 1 AQLEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ----G 168 AQ++ +F+ H + + W P L +NI LW P++ + + Q G Sbjct: 202 AQMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWT--PTDGGSWHVDQRPFVG 259 Query: 169 SADMLPNLRGGAWDPHNHNAVATIT-DSSLHFWDLRSM-KRSNAIEHAHIRDVDYN---- 330 + +L+ W P + A+ + D+S+ WD+R+ ++ + A D D N Sbjct: 260 HTRSVEDLQ---WSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISW 316 Query: 331 PKKQNIIATAEDEFGIRLWDLRMLK--HPLKDLPGHSHWTWAVRHNPEYDELILSAGTDS 504 +++ + + D+ +++WDLR K P+ H +V +P+ + ++G D Sbjct: 317 SRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADH 376 Query: 505 AVNLWLAKVGSD 540 + W V D Sbjct: 377 QITQWDLAVERD 388
>CDC20_MOUSE (Q9JJ66) Cell division cycle protein 20 homolog (p55CDC) (mmCdc20)| Length = 499 Score = 48.1 bits (113), Expect = 2e-05 Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 2/156 (1%) Frame = +1 Query: 103 DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMK 282 D +++LWN + + + D + ++ AW + +++ + WD++ K Sbjct: 203 DNSVYLWNAGSGDILQLLQMEQPGDYISSV---AWIKEGNYLAVGTSNAEVQLWDVQQQK 259 Query: 283 R-SNAIEH-AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVR 456 R N H A + + +N I+++ I D+R+ +H + L GHS +R Sbjct: 260 RLRNMTSHSARVSSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR 316 Query: 457 HNPEYDELILSAGTDSAVNLWLAKVGSDDSGPESPF 564 P+ L S G D+ VN+W + G P F Sbjct: 317 WAPDGRHL-ASGGNDNIVNVWPSGPGESGWAPLQTF 351
>COPB2_DROME (O62621) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| Length = 914 Score = 47.8 bits (112), Expect = 3e-05 Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 5/176 (2%) Frame = +1 Query: 7 LEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLP 186 LE++ + + H+D +RC+ P + L S DD I LWN + +V +G + Sbjct: 89 LEKVHSFEAHSDYLRCIAVHPT-QPLVLTSSDDMLIKLWNWEKMWACQRVF-EGHTHYVM 146 Query: 187 NLRGGAWDPHNHNAVATIT-DSSLHFWDLRSMKRSNAIE--HAHIRDVDY--NPKKQNII 351 + ++P ++N A+ + D ++ W L S + +E + VDY K +I Sbjct: 147 QI---VFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLI 203 Query: 352 ATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + A+D +++WD + K ++ L GH+ AV +PE ++L+ D V +W Sbjct: 204 SGADDRL-VKIWDYQN-KTCVQTLEGHAQNISAVCFHPEL-PIVLTGSEDGTVRIW 256 Score = 39.3 bits (90), Expect = 0.010 Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 2/94 (2%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIE-HA-HIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLK 417 D + ++ ++++ ++ E H+ ++R + +P Q ++ T+ D+ I+LW+ + + Sbjct: 78 DMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPT-QPLVLTSSDDMLIKLWNWEKMWACQR 136 Query: 418 DLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 GH+H+ + NP+ + SA D V +W Sbjct: 137 VFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVW 170
>CDC20_RAT (Q62623) Cell division cycle protein 20 homolog (p55CDC)| Length = 499 Score = 47.4 bits (111), Expect = 4e-05 Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 2/157 (1%) Frame = +1 Query: 103 DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMK 282 D +++LWN + + + D + ++ AW + +++ + WD++ K Sbjct: 203 DNSVYLWNAGSGDILQLLQMEQPGDYISSV---AWIKEGNYLAVGTSNAEVQLWDVQQQK 259 Query: 283 R-SNAIEH-AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVR 456 R N H A + + +N I+++ I D+R+ +H + L GHS +R Sbjct: 260 RLRNMTSHSARVSSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR 316 Query: 457 HNPEYDELILSAGTDSAVNLWLAKVGSDDSGPESPFW 567 P+ L S G D+ VN+W SGP W Sbjct: 317 WAPDGRHL-ASGGNDNIVNVW-------PSGPGESGW 345
>MSI4_ARATH (O22607) WD-40 repeat protein MSI4 (Altered cold-responsive gene 1| protein) Length = 507 Score = 47.4 bits (111), Expect = 4e-05 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 9/101 (8%) Frame = +1 Query: 244 DSSLHFWDLRSMKRS-NAIEHAHIRD---VDYNPKKQNIIATAEDEFGIRLWDLRMLK-- 405 DS L WD R+ +E AH D VD+NP N+I T + +RL+D R L Sbjct: 314 DSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTAN 373 Query: 406 ---HPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 P+ GH V+ +P+ + S+ D +N+W Sbjct: 374 GVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIW 414
>CI112_HUMAN (Q9BTV6) WD repeat-containing protein C9orf112| Length = 452 Score = 42.7 bits (99), Expect(2) = 4e-05 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPL 414 D L WD R + H + + +P +++I+AT + I LWD R +K PL Sbjct: 217 DGLLRGWDTRVPGKFLFTSKRHTMGVCSIQSSPHREHILATGSYDEHILLWDTRNMKQPL 276 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSA 492 D P W ++ +P + L+L+A Sbjct: 277 ADTPVQG-GVWRIKWHPFHHHLLLAA 301 Score = 23.9 bits (50), Expect(2) = 4e-05 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 Query: 578 RQEEPLLNSYTDYEDSIYGIAWS 646 RQE +L S+T + +YG WS Sbjct: 319 RQEATVLTSHTLPDSLVYGADWS 341
>CORO6_MOUSE (Q920M5) Coronin-6 (Clipin E)| Length = 471 Score = 47.0 bits (110), Expect = 5e-05 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 11/93 (11%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPEY 471 + D+D+ P N+IA+A D+ + +W + R + P+ L GHS + +P Sbjct: 84 VLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNITEPVITLEGHSKRVGILSWHPTA 143 Query: 472 DELILSAGTDSAVNLWLAKVGS-----DDSGPE 555 ++LSAG D+ + +W G DD P+ Sbjct: 144 RNVLLSAGGDNVIIIWNVGTGEVLLSLDDIHPD 176
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 47.0 bits (110), Expect = 5e-05 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 5/122 (4%) Frame = +1 Query: 205 WDPHNHNAVATITDSS--LHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQNIIATAEDE 369 W P V+ DS + FWD ++ +S A HAH + +V N N + TA + Sbjct: 252 WHPTKGLVVSGSKDSQQPIKFWDPKT-GQSLATLHAHKNTVMEVKLN-LNGNWLLTASRD 309 Query: 370 FGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSDDSG 549 +L+D+R LK L+ GH AV +P ++ L S G+D ++ W V + G Sbjct: 310 HLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGG 369 Query: 550 PE 555 E Sbjct: 370 ME 371
>PRP46_ASHGO (Q75BY3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 425 Score = 46.6 bits (109), Expect = 6e-05 Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 5/170 (2%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 ++ HT +RCV P+ +D I +W++ + KV QG + ++ A Sbjct: 109 INGHTGWVRCVCVDPVDNAWFATGSNDSTIRVWDL--ATGKLKVTLQGHIMTVRDICISA 166 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAH-----IRDVDYNPKKQNIIATAEDE 369 P+ +A D + WDL +R+ + H + VD +P I++ D Sbjct: 167 RHPYMFSASQ---DKLVKCWDL---ERNTVVRDFHGTLSGVHSVDLHPSLDLIVSAGRDS 220 Query: 370 FGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 +R+WD+R L L GH VR P D I+S TD+ V LW Sbjct: 221 V-VRVWDIRSRSCVLT-LAGHRGPINKVRCLP-VDPQIVSCSTDATVKLW 267 Score = 32.7 bits (73), Expect = 0.96 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = +1 Query: 211 PHNHNAVATITDSSLHFWDLRSMKRSNAIEH--AHIRDVDYNPKKQNIIATAEDEFGIRL 384 P + V+ TD+++ WDL + K + H ++RD+ +NP + + + D+ IR Sbjct: 250 PVDPQIVSCSTDATVKLWDLVAGKPMKTLTHHKRNVRDLAFNPTEFSFASACTDD--IRS 307 Query: 385 WDL 393 W L Sbjct: 308 WKL 310
>MSI5_ARATH (Q9SU78) WD-40 repeat protein MSI5| Length = 487 Score = 45.8 bits (107), Expect = 1e-04 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 9/101 (8%) Frame = +1 Query: 244 DSSLHFWDLRS-MKRSNAIEHAHIRD---VDYNPKKQNIIATAEDEFGIRLWDLRMLK-- 405 DS L WD R+ + +E AH D VD+NP N+I T + +R++D R L Sbjct: 294 DSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSN 353 Query: 406 ---HPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 P+ GH V+ +P+ + S+ D +N+W Sbjct: 354 GVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIW 394
>WDR22_HUMAN (Q96JK2) WD-repeat protein 22 (Breakpoint cluster region protein 2)| (BCRP2) Length = 942 Score = 45.8 bits (107), Expect = 1e-04 Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 5/145 (3%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSM 279 DDR + LW+++ + S Q + N+ A++ N + D + D+ S Sbjct: 74 DDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAFNSGNTKVFSGGNDEQVILHDVESS 133 Query: 280 KRSNAIEHAH-IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHP----LKDLPGHSHWT 444 + + H + + +P NI A++ D+ + +WD+R H L + P H Sbjct: 134 ETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAFH-- 191 Query: 445 WAVRHNPEYDELILSAGTDSAVNLW 519 +V NP L+ +A + V LW Sbjct: 192 -SVMFNPVEPRLLATANSKEGVGLW 215 Score = 35.0 bits (79), Expect = 0.19 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSS-LHFWDLRS 276 +D + L +++ S+++ V + A + G + P N N A+ +D + WD+R Sbjct: 121 NDEQVILHDVE-SSETLDVFAHEDA-----VYGLSVSPVNDNIFASSSDDGRVLIWDIRE 174 Query: 277 MKRSNAIEHAH----IRDVDYNPKKQNIIATAEDEFGIRLWDLR 396 A+ V +NP + ++ATA + G+ LWD+R Sbjct: 175 SPHGEPFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIR 218
>WDR22_MOUSE (Q80T85) WD-repeat protein 22| Length = 946 Score = 45.8 bits (107), Expect = 1e-04 Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 5/145 (3%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSM 279 DDR + LW+++ + S Q + N+ A++ N + D + D+ S Sbjct: 74 DDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAFNSGNTKVFSGGNDEQVILHDVESS 133 Query: 280 KRSNAIEHAH-IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHP----LKDLPGHSHWT 444 + + H + + +P NI A++ D+ + +WD+R H L + P H Sbjct: 134 ETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAFH-- 191 Query: 445 WAVRHNPEYDELILSAGTDSAVNLW 519 +V NP L+ +A + V LW Sbjct: 192 -SVMFNPVEPRLLATANSKEGVGLW 215 Score = 35.0 bits (79), Expect = 0.19 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSS-LHFWDLRS 276 +D + L +++ S+++ V + A + G + P N N A+ +D + WD+R Sbjct: 121 NDEQVILHDVE-SSETLDVFAHEDA-----VYGLSVSPVNDNIFASSSDDGRVLIWDIRE 174 Query: 277 MKRSNAIEHAH----IRDVDYNPKKQNIIATAEDEFGIRLWDLR 396 A+ V +NP + ++ATA + G+ LWD+R Sbjct: 175 SPHGEPFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIR 218
>WDR53_HUMAN (Q7Z5U6) WD-repeat protein 53| Length = 358 Score = 45.8 bits (107), Expect = 1e-04 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 17/116 (14%) Frame = +1 Query: 265 DLRSMKRSNAIEHAHIRDVDYN----PKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGH 432 D+RS+K S ++H H+ + + N + +N++A+A+D I++ DL K ++ L H Sbjct: 79 DVRSLKDS--LDHFHVNEEEINCLSLNQTENLLASADDSGAIKILDLEN-KKVIRSLKRH 135 Query: 433 SHWTWAVRHNPEYDELILSAGTDSAV---------NLWLAKVGSDDS----GPESP 561 S+ +V P+ + ++S G D V LW+ + D++ GP+SP Sbjct: 136 SNICSSVAFRPQRPQSLVSCGLDMQVMLWSLQKARPLWITNLQEDETEEMEGPQSP 191
>CORO_SCHPO (O13923) Coronin-like protein crn1| Length = 601 Score = 45.8 bits (107), Expect = 1e-04 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 9/86 (10%) Frame = +1 Query: 304 AHIRDVDYNPKKQNIIATAEDEFGIRLW----DLRMLK-----HPLKDLPGHSHWTWAVR 456 A + D D+NP ++A+ D+ I +W D +++ HP+ +L GHS V+ Sbjct: 82 AAVLDTDWNPFHDQVLASGGDDSKIMIWKVPEDYTVMEPYEDVHPIAELKGHSRKVGLVQ 141 Query: 457 HNPEYDELILSAGTDSAVNLWLAKVG 534 ++P ++ S+ D+ + LW + G Sbjct: 142 YHPTAANVLASSSADNTIKLWDCEKG 167
>GRWD1_MOUSE (Q810D6) Glutamate-rich WD repeat-containing protein 1 (Protein| A301) Length = 446 Score = 45.8 bits (107), Expect = 1e-04 Identities = 41/198 (20%), Positives = 84/198 (42%), Gaps = 12/198 (6%) Frame = +1 Query: 1 AQLEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ----G 168 A+++ +F+ H + + W P L +N+ LW P+ + + Q G Sbjct: 202 ARIKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWT--PTEGGSWNVDQRPFVG 259 Query: 169 SADMLPNLRGGAWDPHNHNAVATIT-DSSLHFWDLRSMK-RSNAIEHAHIRDVDYN---- 330 + +L+ W P A+ + D+S+ WD+R+ ++ + A D D N Sbjct: 260 HTRSVEDLQ---WSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISW 316 Query: 331 PKKQNIIATAEDEFGIRLWDLRMLK--HPLKDLPGHSHWTWAVRHNPEYDELILSAGTDS 504 +++ + + D+ +++WDLR K P+ H +V +P+ + ++G D+ Sbjct: 317 SRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADN 376 Query: 505 AVNLWLAKVGSDDSGPES 558 + W V D E+ Sbjct: 377 QITQWDLAVERDPEPGET 394
>GRWD1_RAT (Q5XI13) Glutamate-rich WD repeat-containing protein 1| Length = 445 Score = 45.8 bits (107), Expect = 1e-04 Identities = 42/198 (21%), Positives = 85/198 (42%), Gaps = 12/198 (6%) Frame = +1 Query: 1 AQLEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ----G 168 A+++ +F+ H + + W P L +NI LW P++ + + Q G Sbjct: 201 ARVKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWT--PTDGGSWNVDQRPFVG 258 Query: 169 SADMLPNLRGGAWDPHNHNAVATIT-DSSLHFWDLRSMK-RSNAIEHAHIRDVDYN---- 330 + +L+ W P A+ + D+S+ WD+R+ ++ + A D D N Sbjct: 259 HTRSVEDLQ---WSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISW 315 Query: 331 PKKQNIIATAEDEFGIRLWDLRMLK--HPLKDLPGHSHWTWAVRHNPEYDELILSAGTDS 504 +++ + + D+ +++WDLR K P+ H +V +P+ + ++G D+ Sbjct: 316 SRREPFLLSGGDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADN 375 Query: 505 AVNLWLAKVGSDDSGPES 558 + W V D E+ Sbjct: 376 QITQWDLAVERDPESGET 393
>COPB2_MOUSE (O55029) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 905 Score = 45.4 bits (106), Expect = 1e-04 Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 5/176 (2%) Frame = +1 Query: 7 LEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLP 186 LE++ + H+D IRC+ P + L S DD I LW+ D S + +G + Sbjct: 89 LERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWD-KKWSCSQVFEGHTHYVM 146 Query: 187 NLRGGAWDPHNHNAVATIT-DSSLHFWDLRSMKRSNAIE--HAHIRDVDY--NPKKQNII 351 + +P ++N A+ + D ++ W L S + +E + +DY K +I Sbjct: 147 QI---VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLI 203 Query: 352 ATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + A+D +++WD + K ++ L GH+ +PE +I++ D V +W Sbjct: 204 SGADDRL-VKIWDYQN-KTCVQTLEGHAQNVSCASFHPEL-PIIITGSEDGTVRIW 256 Score = 39.3 bits (90), Expect = 0.010 Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 2/146 (1%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWD 267 L S+ + ++ +WN +++ ++ LP +R + + V D + ++ Sbjct: 31 LASLYNGSVCVWN----HETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFN 85 Query: 268 LRSMKRSNAIE-HA-HIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHW 441 +++R + E H+ +IR + +P Q I T+ D+ I+LWD + GH+H+ Sbjct: 86 YNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHY 144 Query: 442 TWAVRHNPEYDELILSAGTDSAVNLW 519 + NP+ + SA D + +W Sbjct: 145 VMQIVINPKDNNQFASASLDRTIKVW 170
>COPB2_HUMAN (P35606) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 905 Score = 45.4 bits (106), Expect = 1e-04 Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 5/176 (2%) Frame = +1 Query: 7 LEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLP 186 LE++ + H+D IRC+ P + L S DD I LW+ D S + +G + Sbjct: 88 LERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWD-KKWSCSQVFEGHTHYVM 145 Query: 187 NLRGGAWDPHNHNAVATIT-DSSLHFWDLRSMKRSNAIE--HAHIRDVDY--NPKKQNII 351 + +P ++N A+ + D ++ W L S + +E + +DY K +I Sbjct: 146 QI---VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLI 202 Query: 352 ATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + A+D +++WD + K ++ L GH+ +PE +I++ D V +W Sbjct: 203 SGADDRL-VKIWDYQN-KTCVQTLEGHAQNVSCASFHPEL-PIIITGSEDGTVRIW 255 Score = 39.3 bits (90), Expect = 0.010 Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 2/146 (1%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWD 267 L S+ + ++ +WN +++ ++ LP +R + + V D + ++ Sbjct: 30 LASLYNGSVCVWN----HETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFN 84 Query: 268 LRSMKRSNAIE-HA-HIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHW 441 +++R + E H+ +IR + +P Q I T+ D+ I+LWD + GH+H+ Sbjct: 85 YNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHY 143 Query: 442 TWAVRHNPEYDELILSAGTDSAVNLW 519 + NP+ + SA D + +W Sbjct: 144 VMQIVINPKDNNQFASASLDRTIKVW 169
>COPB2_BOVIN (P35605) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 905 Score = 45.4 bits (106), Expect = 1e-04 Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 5/176 (2%) Frame = +1 Query: 7 LEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLP 186 LE++ + H+D IRC+ P + L S DD I LW+ D S + +G + Sbjct: 88 LERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWD-KKWSCSQVFEGHTHYVM 145 Query: 187 NLRGGAWDPHNHNAVATIT-DSSLHFWDLRSMKRSNAIE--HAHIRDVDY--NPKKQNII 351 + +P ++N A+ + D ++ W L S + +E + +DY K +I Sbjct: 146 QI---VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLI 202 Query: 352 ATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + A+D +++WD + K ++ L GH+ +PE +I++ D V +W Sbjct: 203 SGADDRL-VKIWDYQN-KTCVQTLEGHAQNVSCASFHPEL-PIIITGSEDGTVRIW 255 Score = 39.3 bits (90), Expect = 0.010 Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 2/146 (1%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWD 267 L S+ + ++ +WN +++ ++ LP +R + + V D + ++ Sbjct: 30 LASLYNGSVCVWN----HETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFN 84 Query: 268 LRSMKRSNAIE-HA-HIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHW 441 +++R + E H+ +IR + +P Q I T+ D+ I+LWD + GH+H+ Sbjct: 85 YNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHY 143 Query: 442 TWAVRHNPEYDELILSAGTDSAVNLW 519 + NP+ + SA D + +W Sbjct: 144 VMQIVINPKDNNQFASASLDRTIKVW 169
>WSB1_MOUSE (O54927) WD repeat and SOCS box-containing protein 1 (WSB-1)| Length = 421 Score = 45.4 bits (106), Expect = 1e-04 Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 2/96 (2%) Frame = +1 Query: 238 ITDSSLHFWDLRSMKRS-NAIEHAH-IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHP 411 + + + WD+ + K N ++H +RD+ + P ++ +A + +R+WDL+ + Sbjct: 147 LNNGRIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWDLKDDGNM 206 Query: 412 LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 +K L H +W ++ +P+ ++ S G AV LW Sbjct: 207 VKVLRAHQNWVYSCAFSPDC-SMLCSVGASKAVFLW 241
>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC 2.7.11.1)| Length = 742 Score = 45.4 bits (106), Expect = 1e-04 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 2/167 (1%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 L HTD + V + P G S D I LW++ + + + Q A+ + +L A Sbjct: 581 LKGHTDYVYAVAFSPDGSMVASGSRDG-TIRLWDVATGKE--RDVLQAPAENVVSL---A 634 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIE-HAH-IRDVDYNPKKQNIIATAEDEFGI 378 + P V +DS++H WD+ S + + E H +R V ++P ++A+ D+ I Sbjct: 635 FSPDGSMLVHG-SDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGA-LLASGSDDRTI 692 Query: 379 RLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 RLWD+ + L GH+ +V +PE + SA D + +W Sbjct: 693 RLWDV-AAQEEHTTLEGHTEPVHSVAFHPE-GTTLASASEDGTIRIW 737 Score = 42.0 bits (97), Expect = 0.002 Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIE-HAH-IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLK 417 D +H WD+ S + +E H +R V ++P ++A+ D+ +RLWD+ + Sbjct: 480 DKLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGA-LLASGSDDATVRLWDVAAAEERAV 538 Query: 418 DLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSD 540 GH+H+ + +P+ ++ S D LW G++ Sbjct: 539 -FEGHTHYVLDIAFSPD-GSMVASGSRDGTARLWNVATGTE 577
>GBLP_CAEEL (Q21215) Guanine nucleotide-binding protein beta subunit 2-like 1| Length = 324 Score = 45.4 bits (106), Expect = 1e-04 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 20/192 (10%) Frame = +1 Query: 4 QLEQLFALDDHTDKIRCVLWWPLGKHDK---LISIDDRNIFLWNIDPSNKSAKVISQGSA 174 Q++ L+ HT + + + ++DK L S D+ I +W++D S + +G Sbjct: 4 QMKLTGTLEGHTGWVTQIATYT--RNDKTTVLSSSRDKTILVWDVD----SVAPVDEGPI 57 Query: 175 DM-LPNLRGGAWDPHNHN------------AVATITDSSLHFWDL-RSMKRSNAIEHAH- 309 + +L G HNH A++ D +L WDL + + I H Sbjct: 58 GRPVRSLTG-----HNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKD 112 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWD-LRMLKHPLKDLPGHSHWTWAVRHNPEY-DELI 483 + V ++ + I++ + D+ I+LW+ L K+ + D H+ W VR +P D +I Sbjct: 113 VLSVAFSADNRQIVSGSRDK-SIKLWNTLAQCKYTITD-DCHTDWVSTVRFSPSNRDPVI 170 Query: 484 LSAGTDSAVNLW 519 +SAG D V +W Sbjct: 171 VSAGWDKVVKVW 182
>PRP4_MOUSE (Q9DAW6) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60| kDa protein) (WD splicing factor Prp4) Length = 521 Score = 45.1 bits (105), Expect = 2e-04 Identities = 39/177 (22%), Positives = 82/177 (46%), Gaps = 7/177 (3%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN 189 E + ++ HT ++ V+W P G+ D R+ LW+++ + ++ Q M Sbjct: 313 EPVADIEGHTVRVARVMWHPSGRFLGTTCYD-RSWRLWDLEAQEE---ILHQEGHSM--- 365 Query: 190 LRGGAWDP--HNHNAVATI--TDSSLHFWDLRSMKRSNAIEHAHIRDV---DYNPKKQNI 348 G +D H ++A D+ WDLR+ + +E H++++ +++P +I Sbjct: 366 ---GVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE-GHLKEIYGINFSPNGYHI 421 Query: 349 IATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 AT + ++WDLR + + +P H + V+ P + + +L+ D+ +W Sbjct: 422 -ATGSGDNTCKVWDLRQ-RRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIW 476
>CORO6_RAT (Q920J3) Coronin-6| Length = 472 Score = 45.1 bits (105), Expect = 2e-04 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 11/93 (11%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPEY 471 + D+D+ P N+IA+ D+ + +W + R + P+ L GHS + +P Sbjct: 84 VLDIDWCPHNDNVIASPSDDTTVMVWQIPDYTPVRNITEPVITLEGHSKRVGILSWHPTA 143 Query: 472 DELILSAGTDSAVNLWLAKVGS-----DDSGPE 555 ++LSAG D+ + +W G DD P+ Sbjct: 144 RNVLLSAGGDNVIIIWNVGTGEVLLSLDDIHPD 176
>HAT2_NEUCR (Q7S7N3) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 564 Score = 44.7 bits (104), Expect = 2e-04 Identities = 37/172 (21%), Positives = 76/172 (44%), Gaps = 10/172 (5%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVI--SQGSADMLPNLRGGAWDPHNHNAVA 234 W P + + +D+ + LW++ ++K + S+ + P + + Sbjct: 199 WNPHEEGCLVTGSEDKTVLLWDLKTYEGTSKQLKYSRKYTHHSHIVNDVQHHPLVKSWIG 258 Query: 235 TITDS-SLHFWDLRSMKRSNAIEHAH------IRDVDYNPKKQNIIATAEDEFGIRLWDL 393 T++D +L D+R + A A I + +NP+ + IIATA + I +WD+ Sbjct: 259 TVSDDLTLQIIDVRRPETDKAAIVARNGHSDAINALAFNPRVETIIATASADKTIGIWDM 318 Query: 394 RMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDS 546 R +K + L GH ++ +P ++ S D + W +++VG + + Sbjct: 319 RNMKSKVHTLEGHQDAVTSLEWHPTESAILGSGSYDRRLLFWDISRVGDEQT 370 Score = 30.4 bits (67), Expect = 4.8 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 6/55 (10%) Frame = +1 Query: 319 VDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDL------PGHSHWTWAVRHNP 465 +++NP ++ + T ++ + LWDL+ + K L HSH V+H+P Sbjct: 197 LNWNPHEEGCLVTGSEDKTVLLWDLKTYEGTSKQLKYSRKYTHHSHIVNDVQHHP 251 Score = 30.0 bits (66), Expect = 6.2 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 10/90 (11%) Frame = +1 Query: 280 KRSNAIEH-AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKH---------PLKDLPG 429 K + I+H + Y P+ +IIAT + + ++D KH P +L G Sbjct: 132 KITQKIDHPGEVNKARYQPQNPDIIATLAVDGRVLIFD--RTKHSITPSGTPSPQLELIG 189 Query: 430 HSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 H + + NP + +++ D V LW Sbjct: 190 HKEEGFGLNWNPHEEGCLVTGSEDKTVLLW 219
>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG| Length = 931 Score = 44.7 bits (104), Expect = 2e-04 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEH--AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLK 417 D W +MK +E A I D+ ++P + + AT+ + +R+WD + L+ Sbjct: 672 DKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRL-ATSSFDKTVRVWDADNKGYSLR 730 Query: 418 DLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGS 537 GHS ++ +P D+LI S D+ + W GS Sbjct: 731 TFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGS 770
>YAGE_SCHPO (Q9UTN4) Hypothetical WD-repeat protein C12G12.14c in chromosome I| Length = 509 Score = 44.7 bits (104), Expect = 2e-04 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 4/142 (2%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSM 279 DD ++ +WN S + K+ G +++ W P + D+ + FWD R+ Sbjct: 184 DDGSLKVWNFHMSTEELKLTGHGW-----DVKTVDWHPSKGLLASGSKDNLVKFWDPRT- 237 Query: 280 KRSNAIEHAHIRDVDYNPKKQNI----IATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTW 447 A H H + ++N +AT + R++DLR +K ++ L GH Sbjct: 238 GTCIATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVFDLRAMKD-VRVLRGHEKDVN 296 Query: 448 AVRHNPEYDELILSAGTDSAVN 513 V +P Y L+ + G+D +VN Sbjct: 297 CVTWHPLYPNLLTTGGSDGSVN 318
>COR1C_MOUSE (Q9WUM4) Coronin-1C (Coronin-3)| Length = 474 Score = 42.4 bits (98), Expect(2) = 2e-04 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDLR------MLKHPLKDLPGHSHWTWAVRHNPEY 471 + D+D+ P +IA+ ++ + +W + L P+ L GHS V +P Sbjct: 83 VLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTA 142 Query: 472 DELILSAGTDSAVNLWLAKVG 534 ++LSAG D+A+ +W G Sbjct: 143 RNVLLSAGCDNAIIIWNVGTG 163 Score = 30.4 bits (67), Expect = 4.8 Identities = 26/118 (22%), Positives = 48/118 (40%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN 189 E + L+ H+ ++ V W P ++ L + D I +WN+ G+ + L N Sbjct: 121 EPVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNV------------GTGEALIN 168 Query: 190 LRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAE 363 L D + + + ++ W A + +R +D P+KQ I+A E Sbjct: 169 L-----DDMHSDMIYNVS------WSRNGSLICTASKDKKVRVID--PRKQEIVAEKE 213 Score = 21.6 bits (44), Expect(2) = 2e-04 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +2 Query: 587 EPLLNSYTDYEDSIYGIAWS 646 E L+N + D IY ++WS Sbjct: 164 EALINLDDMHSDMIYNVSWS 183
>PRP4_PONPY (Q5NVD0) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60| kDa protein) (WD splicing factor Prp4) Length = 521 Score = 44.3 bits (103), Expect = 3e-04 Identities = 39/177 (22%), Positives = 81/177 (45%), Gaps = 7/177 (3%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN 189 E + ++ HT ++ V+W P G+ D R+ LW+++ + ++ Q M Sbjct: 313 EPVADIEGHTVRVARVMWHPSGRFLGTTCYD-RSWRLWDLEAQEE---ILHQEGHSM--- 365 Query: 190 LRGGAWDP--HNHNAVATI--TDSSLHFWDLRSMKRSNAIEHAHIRDV---DYNPKKQNI 348 G +D H ++A D+ WDLR+ + +E H++++ +++P +I Sbjct: 366 ---GVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE-GHLKEIYGINFSPNGYHI 421 Query: 349 IATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 AT + ++WDLR + + +P H + V+ P + +L+ D+ +W Sbjct: 422 -ATGSGDNTCKVWDLRQ-RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 476
>NUDF_EMENI (Q00664) Nuclear migration protein nudF| Length = 444 Score = 44.3 bits (103), Expect = 3e-04 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 4/101 (3%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEHAHIRDV---DYNPKKQN-IIATAEDEFGIRLWDLRMLKHP 411 D ++ WD + ++ HIR V DY +K N ++A+ + I+LWD Sbjct: 135 DCTIKIWDWELGEIERTLK-GHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYAN 193 Query: 412 LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 ++ L GH H +VR D ++SA D + +W G Sbjct: 194 IRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTG 234
>PRP4_HUMAN (O43172) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60| kDa protein) (WD splicing factor Prp4) (hPrp4) Length = 522 Score = 44.3 bits (103), Expect = 3e-04 Identities = 39/177 (22%), Positives = 81/177 (45%), Gaps = 7/177 (3%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN 189 E + ++ HT ++ V+W P G+ D R+ LW+++ + ++ Q M Sbjct: 314 EPVADIEGHTVRVARVMWHPSGRFLGTTCYD-RSWRLWDLEAQEE---ILHQEGHSM--- 366 Query: 190 LRGGAWDP--HNHNAVATI--TDSSLHFWDLRSMKRSNAIEHAHIRDV---DYNPKKQNI 348 G +D H ++A D+ WDLR+ + +E H++++ +++P +I Sbjct: 367 ---GVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE-GHLKEIYGINFSPNGYHI 422 Query: 349 IATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 AT + ++WDLR + + +P H + V+ P + +L+ D+ +W Sbjct: 423 -ATGSGDNTCKVWDLRQ-RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 477 Score = 31.2 bits (69), Expect = 2.8 Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 26/171 (15%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKS---------AKVISQGSADMLPNLRGG---------------AW 207 DDR I + P++K K+ S ++L LRG + Sbjct: 230 DDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSL 289 Query: 208 DPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIR--DVDYNPKKQNIIATAEDEFGIR 381 DP + N + D S+ W L S + IE +R V ++P + + T D R Sbjct: 290 DPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR-SWR 348 Query: 382 LWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 LWDL + L GHS + + + + L + G D+ +W + G Sbjct: 349 LWDLEAQEEILHQ-EGHSMGVYDIAFHQD-GSLAGTGGLDAFGRVWDLRTG 397
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 43.5 bits (101), Expect = 5e-04 Identities = 39/155 (25%), Positives = 57/155 (36%) Frame = +1 Query: 64 WPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATIT 243 W + L+ ++ W++D S ++ GS D + W +V I Sbjct: 448 WDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKV----WCTRQEASVINI- 502 Query: 244 DSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDL 423 MK A+I V YNP N IA + I +DLR + PL Sbjct: 503 ----------DMK-------ANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVF 545 Query: 424 PGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAK 528 GH V+ + + SA TDS + LW K Sbjct: 546 SGHKKAVSYVKFLSNNE--LASASTDSTLRLWDVK 578
>CDC20_HUMAN (Q12834) Cell division cycle protein 20 homolog (p55CDC)| Length = 499 Score = 43.1 bits (100), Expect = 7e-04 Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 2/156 (1%) Frame = +1 Query: 103 DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMK 282 D +++LW+ + + + + + ++ AW + + + + WD++ K Sbjct: 203 DNSVYLWSASSGDILQLLQMEQPGEYISSV---AWIKEGNYLAVGTSSAEVQLWDVQQQK 259 Query: 283 R-SNAIEH-AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVR 456 R N H A + + +N I+++ I D+R+ +H + L GHS +R Sbjct: 260 RLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR 316 Query: 457 HNPEYDELILSAGTDSAVNLWLAKVGSDDSGPESPF 564 P+ L S G D+ VN+W + G P F Sbjct: 317 WAPDGRHL-ASGGNDNLVNVWPSAPGEGGWVPLQTF 351
>WSB2_MOUSE (O54929) WD repeat and SOCS box-containing protein 2 (WSB-2) (SOCS| box-containing WD protein SWiP-2) Length = 404 Score = 43.1 bits (100), Expect = 7e-04 Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Frame = +1 Query: 238 ITDSSLHFWDLRS-MKRSNAIEHAHI-RDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHP 411 + D + W++++ + N H + RD+ + P I+ +A + +R+WDL Sbjct: 130 LNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ 189 Query: 412 LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 ++ L GH W + +P+ L +AG + +V LW Sbjct: 190 IQVLSGHLQWVYCCSISPDCSMLCSAAG-EKSVFLW 224 Score = 32.0 bits (71), Expect = 1.6 Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 8/139 (5%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR 195 L L H D +R + + P G + + D+ + +W+++ K +V+S L + Sbjct: 146 LLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS----GHLQWVY 201 Query: 196 GGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDVDYNPKKQNIIATAEDE 369 + P + + S+ W +RS +E + + D++P ++ TA + Sbjct: 202 CCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSA-LLVTASYD 260 Query: 370 FGIRLWD------LRMLKH 408 + +WD LR L H Sbjct: 261 TSVIMWDPYTGARLRSLHH 279
>WSB2_HUMAN (Q9NYS7) WD repeat and SOCS box-containing protein 2 (WSB-2) (CS| box-containing WD protein) Length = 404 Score = 43.1 bits (100), Expect = 7e-04 Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Frame = +1 Query: 238 ITDSSLHFWDLRS-MKRSNAIEHAHI-RDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHP 411 + D + W++++ + N H + RD+ + P I+ +A + +R+WDL Sbjct: 130 LNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ 189 Query: 412 LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 ++ L GH W + +P+ L +AG + +V LW Sbjct: 190 IQVLSGHLQWVYCCSISPDCSMLCSAAG-EKSVFLW 224 Score = 32.3 bits (72), Expect = 1.3 Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 8/143 (5%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR 195 L L H D +R + + P G + + D+ + +W+++ K +V+S L + Sbjct: 146 LLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS----GHLQWVY 201 Query: 196 GGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDVDYNPKKQNIIATAEDE 369 + P + + S+ W +RS +E + + D++P ++ TA + Sbjct: 202 CCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSA-LLVTASYD 260 Query: 370 FGIRLWD------LRMLKHPLKD 420 + +WD LR L H D Sbjct: 261 TNVIMWDPYTGERLRSLHHTQVD 283
>LIS1_DROME (Q7KNS3) Lissencephaly-1 homolog (Lissencephaly1) (Dlis1) (DLis-1)| Length = 411 Score = 43.1 bits (100), Expect = 7e-04 Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 2/104 (1%) Frame = +1 Query: 229 VATITDSSLHFWDLRSMKRSNAIE-HAH-IRDVDYNPKKQNIIATAEDEFGIRLWDLRML 402 V+ D+++ WD + + +++ H ++DV ++ + + ++A+ + I+LWD + Sbjct: 124 VSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGK-LLASCSADLSIKLWDFQQS 182 Query: 403 KHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 +K + GH H +V P D +LSA D + +W G Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGD-YVLSASRDRTIKMWEVATG 225 Score = 30.8 bits (68), Expect = 3.6 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 29/153 (18%) Frame = +1 Query: 25 LDDHTDKIRCVLWWP--------------------------LGKHDKLISIDDRNIFLWN 126 L DH + C+ W P G DK I I D ++ L Sbjct: 273 LRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCL 332 Query: 127 IDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHA 306 + S V RG A+ P V+ D ++ WDLR+ KR +A Sbjct: 333 LTLSGHDNWV------------RGLAFHPGGKYLVSASDDKTIRVWDLRN-KRCMKTLYA 379 Query: 307 H---IRDVDYNPKKQNIIATAEDEFGIRLWDLR 396 H +D++ +I+ + D+ +++W+ R Sbjct: 380 HQHFCTSIDFHKAHPYVISGSVDQ-TVKVWECR 411
>COPB2_RAT (O35142) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 904 Score = 42.7 bits (99), Expect = 0.001 Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 5/176 (2%) Frame = +1 Query: 7 LEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLP 186 LE++ + H+D IRC+ P + L S DD I LW+ D S + +G + Sbjct: 88 LERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWD-KKWSCSQVFEGHTHYVM 145 Query: 187 NLRGGAWDPHNHNAVATIT-DSSLHFWDLRSMKRSNAIE--HAHIRDVDY--NPKKQNII 351 + +P ++N A+ + D ++ W L S + +E + +DY K +I Sbjct: 146 QI---VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLI 202 Query: 352 ATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + A+D +++WD + K ++ GH+ +PE +I++ D V +W Sbjct: 203 SGADDRL-VKIWDYQN-KTCVQTPEGHAQNVSCATFHPEL-PIIITGSEDGTVRIW 255 Score = 39.3 bits (90), Expect = 0.010 Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 2/146 (1%) Frame = +1 Query: 88 LISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWD 267 L S+ + ++ +WN +++ ++ LP +R + + V D + ++ Sbjct: 30 LASLYNGSVCVWN----HETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFN 84 Query: 268 LRSMKRSNAIE-HA-HIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHW 441 +++R + E H+ +IR + +P Q I T+ D+ I+LWD + GH+H+ Sbjct: 85 YNTLERVHMFEAHSDYIRCIAVHPT-QPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHY 143 Query: 442 TWAVRHNPEYDELILSAGTDSAVNLW 519 + NP+ + SA D + +W Sbjct: 144 VMQIVINPKDNNQFASASLDRTIKVW 169
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 42.7 bits (99), Expect = 0.001 Identities = 41/155 (26%), Positives = 59/155 (38%) Frame = +1 Query: 64 WPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATIT 243 W + L+ ++ W++D S ++ GS D + W + +V I Sbjct: 445 WTMTTRKSLMEYEEHEKRAWSVDFSRTDPSMLVSGSDDCKVKV----WCTNQEASVLNI- 499 Query: 244 DSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDL 423 MK A+I V YNP N IA + I +DLR + P+ Sbjct: 500 ----------DMK-------ANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISRPVHVF 542 Query: 424 PGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAK 528 GH V+ DEL SA TDS + LW K Sbjct: 543 TGHKKAVSYVKFLSN-DEL-ASASTDSTLRLWDVK 575
>NLE1_PONPY (Q5RFF8) Notchless homolog 1| Length = 484 Score = 42.7 bits (99), Expect = 0.001 Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 3/149 (2%) Frame = +1 Query: 82 DKLIS-IDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLH 258 ++L+S DD +FLW+ K ++ A + L + P + + D S+ Sbjct: 341 ERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVL----FSPDSRIVASASFDKSIK 396 Query: 259 FWDLRSMKRSNAIEH--AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGH 432 WD R+ K ++ A + + ++ + +++ + D +++WD++ K + DLPGH Sbjct: 397 LWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDST-LKVWDVKAQKLAM-DLPGH 454 Query: 433 SHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + +AV +P+ + + S G D + +W Sbjct: 455 ADEVYAVDWSPD-GQRVASGGKDKCLRIW 482 Score = 39.3 bits (90), Expect = 0.010 Identities = 43/179 (24%), Positives = 67/179 (37%), Gaps = 9/179 (5%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQG--------SAD 177 L HT + C+ W G L S DR I +W + G S D Sbjct: 241 LTGHTQSVTCLRW---GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 297 Query: 178 MLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIAT 357 LR GA++P + SL R++ R N + P++ + + Sbjct: 298 YA--LRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLMR-------GQGPER---LVS 345 Query: 358 AEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 D+F + LW K PL + GH V +P+ ++ SA D ++ LW + G Sbjct: 346 GSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPD-SRIVASASFDKSIKLWDGRTG 403 Score = 37.0 bits (84), Expect = 0.051 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 7/118 (5%) Frame = +1 Query: 202 AWDPHNHNAVATITDSSLHFWDLRSMKRSNAIE-HAH-IRDVDYNPKKQNIIATAEDEFG 375 A+ P + D+++ FWDL + + H H + + ++P + + + ++ Sbjct: 120 AFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNG-Q 178 Query: 376 IRLWDLRMLKHPLKDLPGHSHW----TWAVRH-NPEYDELILSAGTDSAVNLWLAKVG 534 I LWD K + L GHS W +W H NPE + S+ D +V +W G Sbjct: 179 ILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPEC-RYVASSSKDGSVRIWDTTAG 235
>NLE1_HUMAN (Q9NVX2) Notchless homolog 1| Length = 484 Score = 42.7 bits (99), Expect = 0.001 Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 3/149 (2%) Frame = +1 Query: 82 DKLIS-IDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLH 258 ++L+S DD +FLW+ K ++ A + L + P + + D S+ Sbjct: 341 ERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVL----FSPDSRIVASASFDKSIK 396 Query: 259 FWDLRSMKRSNAIEH--AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGH 432 WD R+ K ++ A + + ++ + +++ + D +++WD++ K + DLPGH Sbjct: 397 LWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDST-LKVWDVKAQKLAM-DLPGH 454 Query: 433 SHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + +AV +P+ + + S G D + +W Sbjct: 455 ADEVYAVDWSPD-GQRVASGGKDKCLRIW 482 Score = 40.0 bits (92), Expect = 0.006 Identities = 43/179 (24%), Positives = 67/179 (37%), Gaps = 9/179 (5%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQG--------SAD 177 L HT + C+ W G L S DR I +W + G S D Sbjct: 241 LTGHTQSVTCLRW---GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 297 Query: 178 MLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIAT 357 LR GA++P + SL R++ R N + P++ + + Sbjct: 298 YA--LRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVR-------GQGPER---LVS 345 Query: 358 AEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 D+F + LW K PL + GH V +P+ ++ SA D ++ LW + G Sbjct: 346 GSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPD-SRIVASASFDKSIKLWDGRTG 403 Score = 37.0 bits (84), Expect = 0.051 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 7/118 (5%) Frame = +1 Query: 202 AWDPHNHNAVATITDSSLHFWDLRSMKRSNAIE-HAH-IRDVDYNPKKQNIIATAEDEFG 375 A+ P + D+++ FWDL + + H H + + ++P + + + ++ Sbjct: 120 AFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNG-Q 178 Query: 376 IRLWDLRMLKHPLKDLPGHSHW----TWAVRH-NPEYDELILSAGTDSAVNLWLAKVG 534 I LWD K + L GHS W +W H NPE + S+ D +V +W G Sbjct: 179 ILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPEC-RYVASSSKDGSVRIWDTTAG 235
>YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C| Length = 515 Score = 42.7 bits (99), Expect = 0.001 Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 9/181 (4%) Frame = +1 Query: 19 FALDDHTDKIRCVLWWPLGKHDKLIS-IDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR 195 + + HT+ + CV W G L S DR + +W+I+ + ++ + Sbjct: 272 YTMSGHTNSVSCVKW---GGQGLLYSGSHDRTVRVWDINSQGRCINILKSHA-------- 320 Query: 196 GGAWDPHNHNAVATITDSSLHFWDL-RSMKRSNAIEHAHIRDVDY-------NPKKQNII 351 H N ++ TD +L + K+ + E A + ++ N + ++ Sbjct: 321 ------HWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMM 374 Query: 352 ATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKV 531 TA D++ + LW+ P+ + GH V +P+ I+SA D+++ LW + Sbjct: 375 VTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPD-GRYIVSASFDNSIKLWDGRD 433 Query: 532 G 534 G Sbjct: 434 G 434 Score = 35.0 bits (79), Expect = 0.19 Identities = 19/70 (27%), Positives = 33/70 (47%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDS 504 + P + + T + R+WD + P+ L GH +W V +P+ E+I + D+ Sbjct: 151 FAPHTSSRMVTGAGDNTARIWDCDT-QTPMHTLKGHYNWVLCVSWSPD-GEVIATGSMDN 208 Query: 505 AVNLWLAKVG 534 + LW K G Sbjct: 209 TIRLWDPKSG 218
>KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 690 Score = 42.7 bits (99), Expect = 0.001 Identities = 36/179 (20%), Positives = 81/179 (45%), Gaps = 2/179 (1%) Frame = +1 Query: 4 QLEQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADML 183 +L++L A H+ + C+ P+ + +D+ + LW + N + G + Sbjct: 8 KLQELVA---HSSNVNCLALGPMSGRVMVTGGEDKKVNLWAVGKQN--CIISLSGHTSPV 62 Query: 184 PNLRGGAWDPHNHNAVATITDSSLHFWDLRSMK--RSNAIEHAHIRDVDYNPKKQNIIAT 357 +++ ++ VA ++ +DL K R+ IR +D++P + +A+ Sbjct: 63 DSVK---FNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGE-FVAS 118 Query: 358 AEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 + ++LWD+R K + GHS ++ +P+ + +++A D+ + LW +G Sbjct: 119 GSTDTNVKLWDVRR-KGCIYTYKGHSDQVNMIKFSPD-GKWLVTASEDTTIKLWDLTMG 175
>WDR53_MOUSE (Q9DB94) WD-repeat protein 53| Length = 358 Score = 42.7 bits (99), Expect = 0.001 Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 4/89 (4%) Frame = +1 Query: 265 DLRSMKRSNAIEHAHIRDVDYN----PKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGH 432 D+RS+K S ++H H+ + + N + ++++A+A+D I++ DL K + L H Sbjct: 79 DVRSLKGS--LDHFHVNEEEINCLSLNETESLLASADDSGAIKILDLEK-KKVTRSLKRH 135 Query: 433 SHWTWAVRHNPEYDELILSAGTDSAVNLW 519 S+ +V P+ + ++S G D V LW Sbjct: 136 SNICSSVAFRPQRPQSLVSCGLDMQVMLW 164
>COR1A_BOVIN (Q92176) Coronin-1A (Coronin-like protein p57) (Coronin-like| protein A) (CLIPINA) (Tryptophan aspartate-containing coat protein) (TACO) Length = 461 Score = 42.7 bits (99), Expect = 0.001 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Frame = +1 Query: 304 AHIRDVDYNPKKQNIIATAEDEFGIRLWDLR------MLKHPLKDLPGHSHWTWAVRHNP 465 A + D+ + P N+IA+ ++ + +W++ L+ P+ L GH+ V +P Sbjct: 82 APVLDIAWCPHNDNVIASGSEDCSVMVWEIPDGGLTLPLREPVVTLEGHTKRVGIVAWHP 141 Query: 466 EYDELILSAGTDSAVNLW 519 ++LSAG D+ + +W Sbjct: 142 TAQNVLLSAGCDNVILVW 159
>WDR12_RAT (P61480) WD-repeat protein 12| Length = 423 Score = 42.7 bits (99), Expect = 0.001 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 3/95 (3%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEHAHIRD-VDYNPKKQNIIATAEDEFGIRLWDLRMLKHPL-- 414 D ++ WD+ S + + + + + Y+P + + + + D IRLWD R L Sbjct: 277 DHTVRVWDVESGGLKSTLTGNKVFNCISYSPLCKRLASGSTDRH-IRLWDPRTKDGSLVS 335 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L H+ W +V+ +P +D+ ++S D+ V LW Sbjct: 336 LSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVKLW 370 Score = 41.6 bits (96), Expect = 0.002 Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 6/169 (3%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNL 192 L L HT+ I VLW D++ S D + +W+++ + + + + Sbjct: 250 LVTLSGHTEAISSVLW---SDADEVCSASWDHTVRVWDVESGGLKSTLTGNKVFNCI--- 303 Query: 193 RGGAWDPHNHNAVATITDSSLHFWDLRS-----MKRSNAIEHAHIRDVDYNPKKQNIIAT 357 ++ P + TD + WD R+ + S + V ++P + + Sbjct: 304 ---SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLIS 360 Query: 358 AEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDS 504 + ++LWD R K PL DL H +V L+LS G D+ Sbjct: 361 GSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTD--TGLLLSGGADN 407
>POP2_SCHPO (O14170) WD-repeat protein pop2 (Proteolysis factor sud1)| Length = 703 Score = 42.7 bits (99), Expect = 0.001 Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 8/175 (4%) Frame = +1 Query: 34 HTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA-- 204 HTD +R + G D L+S D +I +W + + + L +LRG + Sbjct: 506 HTDSVRTIS----GYGDILVSGSYDSSIRIWRVS------------TGECLYHLRGHSLR 549 Query: 205 -----WDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAEDE 369 ++P + ++ D S+ WDL + +E H V QN + + + Sbjct: 550 IYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLE-GHDAFVTLLNVFQNRLISGSAD 608 Query: 370 FGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 IR+WDL K PL LP +S + + DE + +G D +V LW + G Sbjct: 609 STIRIWDLNTGK-PLMVLPSNSGYISSFVS----DEHKIISGNDGSVKLWDVRTG 658
>KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 658 Score = 42.4 bits (98), Expect = 0.001 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 2/142 (1%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSM 279 DD + LW+I+ N + G + ++R + VA S+ WDL + Sbjct: 41 DDCRVNLWSINKPNCIMSLT--GHTSPVESVR---LNTPEELIVAGSQSGSIRVWDLEAA 95 Query: 280 K--RSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAV 453 K R+ A+I +D++P + +A+ + I+LWD+R K + GHS + Sbjct: 96 KILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCL 153 Query: 454 RHNPEYDELILSAGTDSAVNLW 519 R +P+ + + SA D V LW Sbjct: 154 RFSPD-GKWLASAADDHTVKLW 174
>COR1C_HUMAN (Q9ULV4) Coronin-1C (Coronin-3) (hCRNN4)| Length = 474 Score = 42.4 bits (98), Expect = 0.001 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDLR------MLKHPLKDLPGHSHWTWAVRHNPEY 471 + D+D+ P +IA+ ++ + +W + L P+ L GHS V +P Sbjct: 83 VLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHPTA 142 Query: 472 DELILSAGTDSAVNLWLAKVG 534 ++LSAG D+A+ +W G Sbjct: 143 RNVLLSAGCDNAIIIWNVGTG 163 Score = 30.8 bits (68), Expect = 3.6 Identities = 26/118 (22%), Positives = 49/118 (41%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN 189 E + L+ H+ ++ V W P ++ L + D I +WN+ G+ + L N Sbjct: 121 EPVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNV------------GTGEALIN 168 Query: 190 LRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAE 363 L D + + + ++ W+ A + +R +D P+KQ I+A E Sbjct: 169 L-----DDMHSDMIYNVS------WNRNGSLICTASKDKKVRVID--PRKQEIVAEKE 213
>KTNB1_HUMAN (Q9BVA0) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 655 Score = 42.4 bits (98), Expect = 0.001 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 2/142 (1%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSM 279 DD + LW+I+ N + G + ++R + VA S+ WDL + Sbjct: 41 DDCRVNLWSINKPNCIMSLT--GHTSPVESVR---LNTPEELIVAGSQSGSIRVWDLEAA 95 Query: 280 K--RSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAV 453 K R+ A+I +D++P + +A+ + I+LWD+R K + GHS + Sbjct: 96 KILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCL 153 Query: 454 RHNPEYDELILSAGTDSAVNLW 519 R +P+ + + SA D V LW Sbjct: 154 RFSPD-GKWLASAADDHTVKLW 174
>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124| Length = 1683 Score = 42.4 bits (98), Expect = 0.001 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 5/179 (2%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR 195 L L+ H D + + + P GK S D + I LW I K K + +G D + Sbjct: 1232 LKTLNGHQDWVNSLSFSPDGKTLASASAD-KTIKLWRI-ADGKLVKTL-KGHNDSV---- 1284 Query: 196 GGAWDPH---NHNAVATIT-DSSLHFWDLRSMKRSNAIEHAH-IRDVDYNPKKQNIIATA 360 WD + + A+A+ + D+++ W+ ++ H+ + V++ P NIIA+A Sbjct: 1285 ---WDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDS-NIIASA 1340 Query: 361 EDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGS 537 + IRLW R L PL+ L G+S +AV + +I +AG D + LW ++ GS Sbjct: 1341 SLDNTIRLWQ-RPLISPLEVLAGNSG-VYAVSFLHD-GSIIATAGADGNIQLWHSQDGS 1396 Score = 41.6 bits (96), Expect = 0.002 Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 3/147 (2%) Frame = +1 Query: 103 DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMK 282 D+ + +W + +I + N + P + D+++ W++ K Sbjct: 1425 DKTVKIWRVRDGKALKTLIGHDNEVNKVN-----FSPDGKTLASASRDNTVKLWNVSDGK 1479 Query: 283 RSNAIEHAHIRDV---DYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAV 453 ++ H +V ++P + IIA+A + IRLWD + +K LP H+ ++V Sbjct: 1480 FKKTLK-GHTDEVFWVSFSPDGK-IIASASADKTIRLWD-SFSGNLIKSLPAHNDLVYSV 1536 Query: 454 RHNPEYDELILSAGTDSAVNLWLAKVG 534 NP+ ++ S D V LW + G Sbjct: 1537 NFNPD-GSMLASTSADKTVKLWRSHDG 1562
>WDR12_HUMAN (Q9GZL7) WD-repeat protein 12 (YTM1 homolog)| Length = 423 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 3/95 (3%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEHAHIRD-VDYNPKKQNIIATAEDEFGIRLWDLRMLKHPL-- 414 D ++ WD+ S + + + + + Y+P + + + + D IRLWD R L Sbjct: 277 DHTIRVWDVESGSLKSTLTGNKVFNCISYSPLCKRLASGSTDRH-IRLWDPRTKDGSLVS 335 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L H+ W +V+ +P +++ ++S D+ V LW Sbjct: 336 LSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
>COPB2_CAEEL (Q20168) Probable coatomer subunit beta' (Beta'-coat protein)| (Beta'-COP) Length = 1000 Score = 42.4 bits (98), Expect = 0.001 Identities = 34/165 (20%), Positives = 77/165 (46%), Gaps = 4/165 (2%) Frame = +1 Query: 37 TDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSN--KSAKVISQGSADMLPNLRGGAWD 210 +D+++CV P+ L ++ + N+ +WN + KS +V +P +R + Sbjct: 15 SDRVKCVDLHPVETW-LLAALYNGNVHIWNYETQTLVKSFEVCD------VP-VRAAKFV 66 Query: 211 PHNHNAVATITDSSLHFWDLRSMKRSNAIE-HA-HIRDVDYNPKKQNIIATAEDEFGIRL 384 P V D + ++ +++R + E H+ ++R + +P +I++++D +++ Sbjct: 67 PRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDDML-VKM 125 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 WD + GH+H+ + NP+ + +A D V +W Sbjct: 126 WDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVW 170
>PRP46_YEAST (Q12417) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) (Complexed with CEF1 protein 1) (PRP19-associated complex protein 50) (PRP nineteen-associated complex protein 50) Length = 451 Score = 42.4 bits (98), Expect = 0.001 Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 2/167 (1%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 ++ H +RCV P+ + +D + +W++ + A + +R A Sbjct: 135 INGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTL-----AGHVMTVRDVA 189 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMK--RSNAIEHAHIRDVDYNPKKQNIIATAEDEFGI 378 + + D ++ WDL + R + +R V +P ++IATA + I Sbjct: 190 VSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTL-DLIATAGRDSVI 248 Query: 379 RLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 +LWD+R + P+ L GH V+ P D ++S+ TD+ V LW Sbjct: 249 KLWDMR-TRIPVITLVGHKGPINQVQCTP-VDPQVVSSSTDATVRLW 293
>MSI1_YEAST (P13712) Chromatin assembly factor 1 subunit p50 (CAF-1 p50| subunit) (MSI1 protein) (IRA1 multicopy suppressor) Length = 422 Score = 42.0 bits (97), Expect = 0.002 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 7/112 (6%) Frame = +1 Query: 205 WDPHNHNAVATITD-SSLHFWDLRSMK---RSNAIEH-AHIRDVDYNPKKQNIIATAEDE 369 W P + + A T+ +++ DLR+ K +SN +H + +N K I+A+A+ Sbjct: 259 WMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNREKHDGGVNSCRFNYKNSLILASADSN 318 Query: 370 FGIRLWDLR-MLKHPLKDLPGHSHWTWAVRHNPEYDELILSAG-TDSAVNLW 519 + LWD+R M K P+ + H + +P +D ++ +AG D V LW Sbjct: 319 GRLNLWDIRNMNKSPIATME-HGTSVSTLEWSPNFDTVLATAGQEDGLVKLW 369
>NUP43_HUMAN (Q8NFH3) Nucleoporin Nup43 (p42)| Length = 380 Score = 42.0 bits (97), Expect = 0.002 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 6/95 (6%) Frame = +1 Query: 253 LHFWDLR------SMKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPL 414 L WD R S S + + VD +P +Q+++AT + + +WD+R P+ Sbjct: 195 LKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHVVATGGQDGMLSIWDVRQGTMPV 254 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L H W V +P E + + D ++ W Sbjct: 255 SLLKAHEAEMWEVHFHPSNPEHLFTCSEDGSLWHW 289
>COR1A_MOUSE (O89053) Coronin-1A (Coronin-like protein p57) (Coronin-like| protein A) (CLIPINA) (Tryptophan aspartate-containing coat protein) (TACO) Length = 461 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Frame = +1 Query: 304 AHIRDVDYNPKKQNIIATAEDEFGIRLWDLR------MLKHPLKDLPGHSHWTWAVRHNP 465 A + D+ + P N+IA+ ++ + +W++ L+ P+ L GH+ V +P Sbjct: 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHP 141 Query: 466 EYDELILSAGTDSAVNLWLAKVGS 537 ++LSAG D+ + +W G+ Sbjct: 142 TAQNVLLSAGCDNVILVWDVGTGA 165
>CI112_MOUSE (Q9CYU6) WD repeat-containing protein C9orf112 homolog| Length = 477 Score = 42.0 bits (97), Expect = 0.002 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 3/86 (3%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEHAH---IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPL 414 D L WD R + H + + +P +++I+AT + + LWD R ++ PL Sbjct: 216 DCLLRGWDTRMLGTPVFTSKRHCMGVCSIQSSPHQEHILATGSYDEHVLLWDTRNIRQPL 275 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSA 492 D+P W ++ +P + L+L+A Sbjct: 276 ADVPVQG-GVWRLKWHPVHHHLLLAA 300 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/65 (23%), Positives = 31/65 (47%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDS 504 +N + ++ + D+ +R WD RML P+ H +++ +P + ++ + D Sbjct: 202 FNYWQTELVYSGGDDCLLRGWDTRMLGTPVFTSKRHCMGVCSIQSSPHQEHILATGSYDE 261 Query: 505 AVNLW 519 V LW Sbjct: 262 HVLLW 266
>CORO_YEAST (Q06440) Coronin-like protein| Length = 651 Score = 42.0 bits (97), Expect = 0.002 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 15/94 (15%) Frame = +1 Query: 304 AHIRDVDYNPKKQNIIATAEDEFGIRLWDL----RMLKH-----------PLKDLPGHSH 438 A + D D++P + IA+ D+ I +WD+ + H P+K L GH+ Sbjct: 82 AQVLDTDFDPFNDHRIASGSDDSKIGIWDIPENYKFHDHVDEDGEPIDIKPVKFLTGHAR 141 Query: 439 WTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSD 540 V ++P + ++ S+ D V LW + G D Sbjct: 142 KVGHVLYHPVAENVLASSSGDYTVKLWNVETGKD 175
>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163| Length = 1693 Score = 41.6 bits (96), Expect = 0.002 Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 5/174 (2%) Frame = +1 Query: 13 QLFA-LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN 189 Q FA L H + + LW P G+H + S D +W+ + K + N Sbjct: 1210 QCFAVLKGHQNWVNNALWSPDGQHI-ITSSSDGTARVWS-----RHGKCLGTLRGHD-HN 1262 Query: 190 LRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHA-HIRDVDYNPKKQNIIATAED 366 + G + V TD++ W + H + D D++ + + + D Sbjct: 1263 IHGARFSLDGQKIVTYSTDNTARLWTKEGTLLTILRGHQKEVYDADFSADGRFVFTVSAD 1322 Query: 367 EFGIRLWDLRMLKHPLKD---LPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + R WD+ KD L GHSHW NP+ D L L+ D LW Sbjct: 1323 QTA-RQWDISQ-----KDTITLTGHSHWVRNAHFNPKGDRL-LTVSRDKTARLW 1369
>PEX7_YEAST (P39108) Peroxisomal targeting signal 2 receptor (PTS2 receptor)| (Peroxisome import protein PAS7) (Peroxin-7) Length = 375 Score = 41.6 bits (96), Expect = 0.002 Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 30/184 (16%) Frame = +1 Query: 58 LWWPLGKHDKLISIDDRNIFLWN-IDPSNKSAKVISQGSADMLPNLRG----GAWDPHNH 222 +W PL K L+++ R + + +DP N A ++ + S + R + PH+ Sbjct: 131 IWSPLRKQS-LMTLTPRPLEITKMVDPLN--AIILKKKSFTGISKNRNCVYQAQFSPHDQ 187 Query: 223 NAVATITDSSL-HFWDLR---SMKRSNAIEHAHIRDV--DYNPKKQNIIATAEDEFGIRL 384 N V + + +S +D+R ++N + H+ + + D+N + ++AT + IR+ Sbjct: 188 NLVLSCSGNSYASLFDIRLPSGKNQNNFLVHSGLEALTCDFNKYRPYVVATGGVDNAIRI 247 Query: 385 WDLRMLKHP-----LKDLPGHSHWTWAVRH--------------NPEYDELILSAGTDSA 507 WD+RML + +PG H + + +P + +++SA D Sbjct: 248 WDIRMLNKNESATIKRTVPGQLHNSSCINEIPNAHGLAIRKVTWSPHHSNILMSASYDMT 307 Query: 508 VNLW 519 +W Sbjct: 308 CRIW 311
>NLE1_MOUSE (Q8VEJ4) Notchless homolog 1| Length = 484 Score = 41.6 bits (96), Expect = 0.002 Identities = 34/149 (22%), Positives = 71/149 (47%), Gaps = 3/149 (2%) Frame = +1 Query: 82 DKLIS-IDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLH 258 ++L+S DD +FLW+ K ++ A + L + P + + D S+ Sbjct: 341 ERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVL----FSPDSRIVASASFDKSIK 396 Query: 259 FWDLRSMKRSNAIEH--AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGH 432 WD R+ K ++ A + + ++ + +++ + D +++WD++ K DLPGH Sbjct: 397 LWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDST-LKVWDVKAQKLAT-DLPGH 454 Query: 433 SHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + +AV +P+ + + S G D + +W Sbjct: 455 ADEVYAVDWSPD-GQRVASGGKDKCLRIW 482 Score = 40.0 bits (92), Expect = 0.006 Identities = 44/179 (24%), Positives = 66/179 (36%), Gaps = 9/179 (5%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQG--------SAD 177 L HT + C+ W G L S DR I +W + G S D Sbjct: 241 LTGHTQSVTCLRW---GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 297 Query: 178 MLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIAT 357 LR GA++P A SL R+ R N + P++ + + Sbjct: 298 YA--LRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVR-------GQGPER---LVS 345 Query: 358 AEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 D+F + LW K PL + GH V +P+ ++ SA D ++ LW + G Sbjct: 346 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPD-SRIVASASFDKSIKLWDGRTG 403
>WDR12_MOUSE (Q9JJA4) WD-repeat protein 12 (YTM1 homolog)| Length = 423 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 3/95 (3%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEHAHIRD-VDYNPKKQNIIATAEDEFGIRLWDLRMLKHPL-- 414 D ++ WD+ S + + + + + Y+P + + + + D IRLWD R L Sbjct: 277 DHTIRVWDVESGGLKSTLTGNKVFNCISYSPLCKRLASGSTDRH-IRLWDPRTKDGSLVS 335 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L H+ W +V+ +P +++ ++S D+ V LW Sbjct: 336 LSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370 Score = 41.2 bits (95), Expect = 0.003 Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 6/169 (3%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNL 192 L L HT+ I VLW +++ S D I +W+++ + + + + Sbjct: 250 LVTLSGHTEAISSVLW---SDAEEICSASWDHTIRVWDVESGGLKSTLTGNKVFNCI--- 303 Query: 193 RGGAWDPHNHNAVATITDSSLHFWDLRS-----MKRSNAIEHAHIRDVDYNPKKQNIIAT 357 ++ P + TD + WD R+ + S + V ++P + + + Sbjct: 304 ---SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLIS 360 Query: 358 AEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDS 504 + ++LWD R K PL DL H +V L+LS G D+ Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTD--TGLLLSGGADN 407
>YM3M_CAEEL (P91343) Hypothetical WD-repeat protein F55F8.5| Length = 439 Score = 41.6 bits (96), Expect = 0.002 Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 6/174 (3%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR 195 + + H DK+ V W P D I W+++ + + +++ S + Sbjct: 272 MVTIGGHRDKVSAVEWCPWNSGHAFSCSWDHTIVEWDLELAGEISRIKGPKSFTSID--- 328 Query: 196 GGAWDPHNHNAVATITDSSLHFWDLR----SMKRSNAIEHAH--IRDVDYNPKKQNIIAT 357 P + +++ TD+ +D + SM + + I H + + V +NP N + Sbjct: 329 ---LHPKSDLLISSCTDAIPRLYDPKNRDGSMVKQSFIGHQNGWVEAVKWNPLDTNQFVS 385 Query: 358 AEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + ++WD+R K L D+ GH N + LI + D + ++ Sbjct: 386 VSTDKTAKMWDVRSSKSSLFDIHGHDDRILCATWN---EGLIATGSADCTIKIF 436
>NLE1_BOVIN (Q58D20) Notchless homolog 1| Length = 485 Score = 41.6 bits (96), Expect = 0.002 Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 3/149 (2%) Frame = +1 Query: 82 DKLIS-IDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLH 258 ++L+S DD +FLW+ P+ + L N + P + + D S+ Sbjct: 342 ERLVSGSDDFTLFLWS--PAEDKKPLARMTGHQALINQV--VFSPDSRVIASASFDKSIK 397 Query: 259 FWDLRSMKRSNAIEH--AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGH 432 WD R+ K ++ A + + ++ + +++ + D +++WD++ K DLPGH Sbjct: 398 LWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDST-LKVWDVKAQKLST-DLPGH 455 Query: 433 SHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + +AV +P+ + + S G D + +W Sbjct: 456 ADEVYAVDWSPD-GQRVASGGKDKCLRIW 483 Score = 38.9 bits (89), Expect = 0.013 Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 9/179 (5%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQG--------SAD 177 L H + C+ W G L S DR I +W + G S D Sbjct: 242 LTGHAQSVTCLRW---GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298 Query: 178 MLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIAT 357 LR GA++P + A SL R++ R N + P++ + + Sbjct: 299 YA--LRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVR-------GQGPER---LVS 346 Query: 358 AEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 D+F + LW K PL + GH V +P+ +I SA D ++ LW + G Sbjct: 347 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPD-SRVIASASFDKSIKLWDGRTG 404 Score = 36.6 bits (83), Expect = 0.066 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 7/118 (5%) Frame = +1 Query: 202 AWDPHNHNAVATITDSSLHFWDLRSMKRSNAIE-HAH-IRDVDYNPKKQNIIATAEDEFG 375 A+ P + D+++ FWDL + + H H + + ++P + + + ++ Sbjct: 121 AFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNG-Q 179 Query: 376 IRLWDLRMLKHPLKDLPGHSHW----TWAVRH-NPEYDELILSAGTDSAVNLWLAKVG 534 I LWD K + L GHS W +W H NPE + S+ D +V +W G Sbjct: 180 ILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPEC-RYVASSSKDGSVRVWDTTAG 236
>WDR26_MOUSE (Q8C6G8) WD-repeat protein 26| Length = 514 Score = 41.2 bits (95), Expect = 0.003 Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 4/102 (3%) Frame = +1 Query: 226 AVATITDSSLHFWDLRSM----KRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDL 393 A+ + +H WDL+ K + + + ++ IA+ ++ + +W Sbjct: 394 ALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHK 453 Query: 394 RMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 R + P+ +L GH+ V NP+ ++ SA D V +W Sbjct: 454 RS-ELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIW 494
>WDR26_HUMAN (Q9H7D7) WD-repeat protein 26| Length = 514 Score = 41.2 bits (95), Expect = 0.003 Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 4/102 (3%) Frame = +1 Query: 226 AVATITDSSLHFWDLRSM----KRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDL 393 A+ + +H WDL+ K + + + ++ IA+ ++ + +W Sbjct: 394 ALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHK 453 Query: 394 RMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 R + P+ +L GH+ V NP+ ++ SA D V +W Sbjct: 454 RS-ELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIW 494
>WDR57_MOUSE (Q6PE01) WD-repeat protein 57| Length = 358 Score = 41.2 bits (95), Expect = 0.003 Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 10/178 (5%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNL 192 + L H ++ C + P G L S DR I LWN+ G D L Sbjct: 60 IMLLSGHEGEVYCCKFHPNGS--TLASAGFDRLILLWNV-----------YGDCDNYATL 106 Query: 193 RG--GAWDPHNHNAVATI-----TDSSLHFWDLRSMKRSNAIE-HAHIRDVDYNPKK-QN 345 +G GA ++N ++ TD ++ WD + +R ++ H + Y ++ Sbjct: 107 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ 166 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 ++ T D+ ++LWD+R K +++ AV N D+ I+S G D+ + +W Sbjct: 167 LVCTGSDDGTVKLWDIR--KKAAVQTFQNTYQVLAVTFNDTSDQ-IISGGIDNDIKVW 221 Score = 30.4 bits (67), Expect = 4.8 Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 5/94 (5%) Frame = +1 Query: 103 DRNIFLWNIDP---SNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLR 273 D + +W++ P + K+ + NL +W P A D ++ WD Sbjct: 257 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT 316 Query: 274 SMKRSNAIE-HA-HIRDVDYNPKKQNIIATAEDE 369 S + + HA I +V ++P + I++ + D+ Sbjct: 317 SRRVLYKLPGHAGSINEVAFHPDEPIILSASSDK 350
>RRB1_YEAST (Q04225) Ribosome assembly protein RRB1| Length = 511 Score = 40.8 bits (94), Expect = 0.004 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 11/111 (9%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIE----HAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLK-- 405 D + WD RS K AI + + + ++ K ++A+ +D +WDLR Sbjct: 343 DGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFTPS 402 Query: 406 -----HPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSDD 543 P+ H ++ NP + ++ D+ V LW V +DD Sbjct: 403 NADAVQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADD 453 Score = 34.7 bits (78), Expect = 0.25 Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 23/171 (13%) Frame = +1 Query: 76 KHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWD-----PHNHNAVATI 240 KH IS+ N + I S+K +++ G N G WD P N +AV + Sbjct: 355 KHKPAISVKASNTDVNVISWSDKIGYLLASGD----DNGTWGVWDLRQFTPSNADAVQPV 410 Query: 241 TDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRM------L 402 H I + +NP ++I+A ++ + LWDL + + Sbjct: 411 AQYDFH--------------KGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEI 456 Query: 403 KH------PLKDLPGH---SHWTWAVRHNPEYDEL---ILSAGTDSAVNLW 519 K L+++P HW V+ + ++ ++S GTD +N+W Sbjct: 457 KQQAAETKELQEIPPQLLFVHWQKEVKDVKWHKQIPGCLVSTGTD-GLNVW 506
>WDR57_HUMAN (Q96DI7) WD-repeat protein 57 (Prp8-binding protein) (hPRP8BP) (U5| snRNP-specific 40 kDa protein) (38 kDa splicing factor) Length = 357 Score = 40.8 bits (94), Expect = 0.004 Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 10/178 (5%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNL 192 + L H ++ C + P G L S DR I LWN+ G D L Sbjct: 59 IMLLSGHEGEVYCCKFHPNGS--TLASAGFDRLILLWNV-----------YGDCDNYATL 105 Query: 193 RG--GAWDPHNHNAVATI-----TDSSLHFWDLRSMKRSNAIE-HAHIRDVDYNPKK-QN 345 +G GA ++N ++ TD ++ WD + +R ++ H + Y ++ Sbjct: 106 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ 165 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 ++ T D+ ++LWD+R K +++ AV N D+ I+S G D+ + +W Sbjct: 166 LVCTGSDDGTVKLWDIR--KKAAIQTFQNTYQVLAVTFNDTSDQ-IISGGIDNDIKVW 220 Score = 31.2 bits (69), Expect = 2.8 Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 5/94 (5%) Frame = +1 Query: 103 DRNIFLWNIDP---SNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLR 273 D + +W++ P + K+ + NL +W P A D ++ WD Sbjct: 256 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT 315 Query: 274 SMKRSNAIE-HA-HIRDVDYNPKKQNIIATAEDE 369 S + + HA I +V ++P + II+ + D+ Sbjct: 316 SRRILYKLPGHAGSINEVAFHPDEPIIISASSDK 349
>YDSB_SCHPO (O14186) Hypothetical WD-repeat protein C4F8.11 in chromosome I| Length = 846 Score = 40.4 bits (93), Expect = 0.005 Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 2/104 (1%) Frame = +1 Query: 214 HNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDVDYNPKKQNIIATAEDEFGIRLW 387 H + D + WD + + RDV ++P + N A D ++ W Sbjct: 146 HPSYVLTASQDGLIKLWDYKESSSTITFRGNSEAARDVVFSPSEPNEFVAAYDSGILQKW 205 Query: 388 DLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 D+R K P L H+ V ++P + S G D + +W Sbjct: 206 DIRFPKLPFLKLAAHNGVVLCVNYSPN-GVFLASCGRDKTIRIW 248
>NUP43_MOUSE (P59235) Nucleoporin Nup43| Length = 380 Score = 40.4 bits (93), Expect = 0.005 Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 6/103 (5%) Frame = +1 Query: 253 LHFWDLRSMKR------SNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPL 414 L WD R S + + VD +P +Q+++AT + + +WD+R P+ Sbjct: 195 LKIWDFRQQGSEPCQILSLTGDRVPLHCVDRHPDQQHVVATGGQDGMLSIWDVRQGTMPV 254 Query: 415 KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSDD 543 L H W V +P + + + D ++ W A + + Sbjct: 255 SLLKAHEAEMWEVHFHPSNPDHLFTCSEDGSLWHWDASTNAPE 297
>HAT2_DEBHA (Q6BK34) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 415 Score = 40.4 bits (93), Expect = 0.005 Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 15/186 (8%) Frame = +1 Query: 34 HTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN--LRGGAW 207 H D + W P K L + DD+ + L D S A +SQ + W Sbjct: 164 HEDNGYGLSWSPHKKGYLLTASDDKTVVL--TDTSRLDATDLSQVCKFTTHKDIVNDAKW 221 Query: 208 DPHNHNAVATITDSS-LHFWDLRS----MKRSNAIEHAHIRDVDYNPKKQNIIATAEDEF 372 + + +++D + +D+R+ + + E I + ++P Q ++AT Sbjct: 222 HQFDESLFGSVSDDKYFYLFDIRTPGEPVSKFYHPESEGINSLSFSPFSQYLVATGNANS 281 Query: 373 GIRLWDLRMLKHP-------LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAK 528 I L D R L L + GHS ++ +P D ++ S D + LW L K Sbjct: 282 NISLLDTRKLSTKSAVSDGLLHTMMGHSDSITSLEFSPHKDGMLASGSQDRRLILWDLFK 341 Query: 529 VGSDDS 546 VG + + Sbjct: 342 VGEEQA 347
>WDS_DROME (Q9V3J8) Protein will die slowly| Length = 361 Score = 40.4 bits (93), Expect = 0.005 Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDVDYNPKKQNIIATAEDEFGI 378 + P+ ++ D + W K I I DV ++ + +++ ++D+ + Sbjct: 80 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKT-L 138 Query: 379 RLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 ++W+L K LK L GHS++ + NP+ LI+S D +V +W + G Sbjct: 139 KVWELSTGKS-LKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTG 188
>GBLP_CHLRE (P25387) Guanine nucleotide-binding protein beta subunit-like| protein Length = 318 Score = 40.0 bits (92), Expect = 0.006 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 5/97 (5%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEHAHIRDV---DYNPKKQNIIATAEDEFGIRLWD-LRMLKHP 411 D +L WDL + + H +DV ++ + I++ + D+ I+LW+ L K+ Sbjct: 85 DGTLRLWDLNTGTTTRRFV-GHTKDVLSVAFSVDNRQIVSGSRDKT-IKLWNTLGECKYT 142 Query: 412 LKDLPGHSHWTWAVRHNP-EYDELILSAGTDSAVNLW 519 + + GH+ W VR +P + +I+S G D V +W Sbjct: 143 IGEPEGHTEWVSCVRFSPMTTNPIIVSGGWDKMVKVW 179
>PRP46_SCHPO (O13615) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing| protein 5) (Complexed with cdc5 protein 1) Length = 473 Score = 40.0 bits (92), Expect = 0.006 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 3/168 (1%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 + H +RCV P G DR I +W++ ++ V+ + +RG A Sbjct: 159 ISGHLGWVRCVDVEP-GNQWFCTGAGDRTIKIWDL-----ASGVLKLTLTGHIATVRGLA 212 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQ---NIIATAEDEFG 375 P + + D + WDL + K H H+ V Y K +++ TA + Sbjct: 213 VSPRHPYLFSCGEDKMVKCWDLETNKVIRHY-HGHLSGV-YALKLHPTLDVLVTAGRDAV 270 Query: 376 IRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 R+WD+R ++ + L GH T A E+D +++ DS + LW Sbjct: 271 ARVWDMRTRQN-VHVLSGHKS-TVASLAVQEFDPQVVTGSMDSTIRLW 316
>WD66_PHYPO (P90587) 66 kDa stress protein (p66)| Length = 601 Score = 40.0 bits (92), Expect = 0.006 Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 2/132 (1%) Frame = +1 Query: 7 LEQLFALDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADML 183 L + L H + + + P GKH S D +R+IF+W+ S K+ +G Sbjct: 475 LSEQAVLSGHRGFLTAIAYSPDGKH--FASADQNRDIFVWD----KASRKIKVEGWVYHN 528 Query: 184 PNLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVD-YNPKKQNIIATA 360 + AW+ +++N V DS ++ W + + AI++AH V+ ++ +A+A Sbjct: 529 ARVTSLAWNSNSNNIVTGSLDSHVYVWSVSEPSKHIAIKNAHRGGVNAVLWVDEHTVASA 588 Query: 361 EDEFGIRLWDLR 396 + I+ W ++ Sbjct: 589 GLDCSIKTWTIK 600 Score = 30.0 bits (66), Expect = 6.2 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = +1 Query: 184 PNLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAI----EHAHIRDVDYNPKKQNII 351 P + GG DP +N + T ++ + +R++K N EHA V I Sbjct: 20 PVVLGG--DPKGNNFLYTCGNAVI----IRNIKNPNQADIYYEHAQPATVAKYAPSGFYI 73 Query: 352 ATAEDEFGIRLWDLRMLKHPLK 417 A+ + +R+WD L+HPLK Sbjct: 74 ASGDLSGTLRIWDTTQLEHPLK 95
>COPA_YEAST (P53622) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| Length = 1201 Score = 39.7 bits (91), Expect = 0.008 Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 2/112 (1%) Frame = +1 Query: 190 LRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHA--HIRDVDYNPKKQNIIATAE 363 +RG + P V+ D ++ W L + K + ++R V ++ + II+ ++ Sbjct: 56 VRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASD 115 Query: 364 DEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 D+ IR+W+ + K + L GH+H+ + +P D+LI+SA D + +W Sbjct: 116 DQT-IRIWNWQNRKE-IACLTGHNHFVMCAQFHPT-DDLIVSASLDETIRIW 164
>COR1A_HUMAN (P31146) Coronin-1A (Coronin-like protein p57) (Coronin-like| protein A) (CLIPINA) (Tryptophan aspartate-containing coat protein) (TACO) Length = 461 Score = 39.7 bits (91), Expect = 0.008 Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Frame = +1 Query: 304 AHIRDVDYNPKKQNIIATAEDEFGIRLWDLR------MLKHPLKDLPGHSHWTWAVRHNP 465 A + D+ + P N+IA+ ++ + +W++ L+ P+ L GH+ V + Sbjct: 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLMLPLREPVVTLEGHTKRVGIVAWHT 141 Query: 466 EYDELILSAGTDSAVNLWLAKVGS 537 ++LSAG D+ + +W G+ Sbjct: 142 TAQNVLLSAGCDNVIMVWDVGTGA 165
>COR1B_RAT (O89046) Coronin-1B (Coronin-2)| Length = 484 Score = 39.3 bits (90), Expect = 0.010 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPEY 471 + D+D+ P +IA+ ++ + +W + L P+ L GH+ + +P Sbjct: 85 VLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIITWHPTA 144 Query: 472 DELILSAGTDSAVNLW 519 ++LSAG D+ V +W Sbjct: 145 RNVLLSAGCDNVVLIW 160 Score = 30.0 bits (66), Expect = 6.2 Identities = 21/100 (21%), Positives = 43/100 (43%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN 189 E + L+ HT ++ + W P ++ L + D + +WN+ + + ++ S D++ N Sbjct: 123 EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSL-HPDLIYN 181 Query: 190 LRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAH 309 + +W+ + D S+ D R E AH Sbjct: 182 V---SWNHNGSLFCTACKDKSVRIIDPRRGTLVAEREKAH 218
>COR1B_MOUSE (Q9WUM3) Coronin-1B (Coronin-2)| Length = 484 Score = 39.3 bits (90), Expect = 0.010 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPEY 471 + D+D+ P +IA+ ++ + +W + L P+ L GH+ + +P Sbjct: 85 VLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIITWHPTA 144 Query: 472 DELILSAGTDSAVNLW 519 ++LSAG D+ V +W Sbjct: 145 RNVLLSAGCDNVVLIW 160 Score = 31.2 bits (69), Expect = 2.8 Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 9/144 (6%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN 189 E + L+ HT ++ + W P ++ L + D + +WN+ + + ++ S D++ N Sbjct: 123 EPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSL-HPDLIYN 181 Query: 190 LRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAE-- 363 + +W+ + + D S+ D R E AH P + +A + Sbjct: 182 V---SWNHNGSLFCSACKDKSVRIIDPRRGTLVAEREKAH---EGARPMRAIFLADGKVF 235 Query: 364 -------DEFGIRLWDLRMLKHPL 414 E + LWD L+ P+ Sbjct: 236 TTGFSRMSERQLALWDPENLEEPM 259
>COR1B_PONPY (Q5NVK4) Coronin-1B| Length = 489 Score = 39.3 bits (90), Expect = 0.010 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPEY 471 + D+D+ P +IA+ ++ + +W + L P+ L GH+ + +P Sbjct: 85 VLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIIAWHPTA 144 Query: 472 DELILSAGTDSAVNLW 519 ++LSAG D+ V +W Sbjct: 145 RNVLLSAGCDNVVLIW 160 Score = 31.6 bits (70), Expect = 2.1 Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 9/144 (6%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN 189 E + L+ HT ++ + W P ++ L + D + +WN+ + + ++ S D++ N Sbjct: 123 EPVVVLEGHTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSL-HPDLIYN 181 Query: 190 LRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAE-- 363 + +W+ + + D S+ D R E AH P + +A + Sbjct: 182 V---SWNRNGSLFCSACKDKSVRIIDPRQGTLVAEREKAH---EGARPMRAIFLADGKVF 235 Query: 364 -------DEFGIRLWDLRMLKHPL 414 E + LWD L+ P+ Sbjct: 236 TTGFSRMSERQLALWDPENLEEPM 259
>COR1B_HUMAN (Q9BR76) Coronin-1B (Coronin-2)| Length = 489 Score = 39.3 bits (90), Expect = 0.010 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPEY 471 + D+D+ P +IA+ ++ + +W + L P+ L GH+ + +P Sbjct: 85 VLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIIAWHPTA 144 Query: 472 DELILSAGTDSAVNLW 519 ++LSAG D+ V +W Sbjct: 145 RNVLLSAGCDNVVLIW 160 Score = 31.2 bits (69), Expect = 2.8 Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 9/144 (6%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN 189 E + L+ HT ++ + W P ++ L + D + +WN+ + + ++ S D++ N Sbjct: 123 EPVVVLEGHTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSL-HPDLIYN 181 Query: 190 LRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAE-- 363 + +W+ + + D S+ D R E AH P + +A + Sbjct: 182 V---SWNHNGSLFCSACKDKSVRIIDPRRGTLVAEREKAH---EGARPMRAIFLADGKVF 235 Query: 364 -------DEFGIRLWDLRMLKHPL 414 E + LWD L+ P+ Sbjct: 236 TTGFSRMSERQLALWDPENLEEPM 259
>LIS1_CAEEL (Q9NDC9) Lissencephaly-1 homolog (Pronuclear migration abnormal| protein 1) Length = 404 Score = 39.3 bits (90), Expect = 0.010 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 2/99 (2%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIE-HAH-IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLK 417 D+++ WD + + ++ H + D+ + + +++ + D I+LWD LK Sbjct: 127 DATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSD-LSIKLWDFGQTYDCLK 185 Query: 418 DLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 L GH H +V P D +LSA D + W G Sbjct: 186 SLKGHEHTVSSVTFLPTGD-FVLSASRDHTIKQWDISTG 223 Score = 38.1 bits (87), Expect = 0.023 Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 15/139 (10%) Frame = +1 Query: 25 LDDHTDKIRCVLWWP--------------LGKHDKLISIDDRNIFLWNIDPSNKSAKVIS 162 L DH + CV W P H DR+I WNI+ + +++ Sbjct: 271 LRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLA 330 Query: 163 QGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIE-HAHIRDVDYNPKK 339 + +RG A+ P ++ D +L W+L + + AIE H H + Sbjct: 331 HENW-----VRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQT 385 Query: 340 QNIIATAEDEFGIRLWDLR 396 + T + ++W+ R Sbjct: 386 SPFVITGSVDMSCKVWECR 404
>YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2| Length = 501 Score = 38.9 bits (89), Expect = 0.013 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 2/99 (2%) Frame = +1 Query: 244 DSSLHFWDLRSMK--RSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLK 417 D + W+ M ++ A I D ++ Q IA+A D+ ++++D+ + L+ Sbjct: 234 DKQIKVWNTVDMTYLQTLASHQLGINDFSWSSNSQ-FIASASDDTTVKIFDV-ISGACLR 291 Query: 418 DLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 + GH+++ + NP+ LI SAG D V +W K G Sbjct: 292 TMRGHTNYVFCCSFNPQ-SSLIASAGFDETVRVWDFKTG 329
>WSB1_FUGRU (Q9W5Z5) WD repeat and SOCS box-containing protein 1 (WSB-1)| Length = 427 Score = 38.9 bits (89), Expect = 0.013 Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 2/96 (2%) Frame = +1 Query: 238 ITDSSLHFWDLRS-MKRSNAIEHAHI-RDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHP 411 + + + WD+ + N ++H I RD+ + P ++ +A + +R+WDL+ + Sbjct: 152 LNNGRIKIWDVYTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGNM 211 Query: 412 LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 +K L GH + ++ +P+ ++ S G AV LW Sbjct: 212 VKVLWGHPNRVYSSAFSPD-SSVLCSVGASKAVLLW 246 Score = 29.6 bits (65), Expect = 8.1 Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 3/128 (2%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN-L 192 L L DHTD +R + + P G + + D+ + +W++ KV+ PN + Sbjct: 168 LLNLMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGNMVKVLWGH-----PNRV 222 Query: 193 RGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDVDYNPKKQNIIATAED 366 A+ P + + ++ W++ +E H + +++P ++ATA Sbjct: 223 YSSAFSPDSSVLCSVGASKAVLLWNMDKYTLIRKLEGHHNDVVSCEFSPDGA-LLATASY 281 Query: 367 EFGIRLWD 390 + + +WD Sbjct: 282 DTRVIVWD 289
>ERCC8_MOUSE (Q8CFD5) DNA excision repair protein ERCC-8 (Cockayne syndrome WD| repeat protein CSA homolog) Length = 397 Score = 38.5 bits (88), Expect = 0.017 Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 16/187 (8%) Frame = +1 Query: 28 DDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAW 207 D H + V W+P S D+ + +W D + A + + + A Sbjct: 96 DVHKYSVETVQWYPHDTGMFTSSSFDKTLKVW--DTNTLQAADVFNFEETVYSHHMSPAA 153 Query: 208 DPHNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDVDYNPKKQNIIATAEDEFGIR 381 H AV T + DL+S S+ ++ I V ++P+ I+ATA + ++ Sbjct: 154 TKHCLVAVGT-RGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRHDYILATASADSRVK 212 Query: 382 LWDLRMLKHPLKDLPGH------SHWTWAVRHNPEYDEL--------ILSAGTDSAVNLW 519 LWD+R L L H + + HN + + L +L+ GTD+ + LW Sbjct: 213 LWDVRRASGCLLTLDQHNGKKSQAAESANTAHNGKVNGLCFTSDGLHLLTIGTDNRMRLW 272 Query: 520 LAKVGSD 540 + G + Sbjct: 273 NSSSGDN 279
>WD51B_PONPY (Q5RD06) WD-repeat protein 51B| Length = 451 Score = 38.5 bits (88), Expect = 0.017 Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 43/186 (23%) Frame = +1 Query: 103 DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFW--DLRS 276 D + LWN P ++ + + G D++ +++ + PH + + D ++ W D R Sbjct: 39 DTFLMLWNFKPHARAYRYV--GHKDVVTSVQ---FSPHGNLLASASRDRTVRLWIPDKRG 93 Query: 277 MKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVR 456 A +R VD++ Q +ATA ++ I++W + + L L H+HW + Sbjct: 94 KFSEFKAHTAPVRSVDFSADGQ-FLATASEDKSIKVWSMYRQRF-LYSLYRHTHWVRCAK 151 Query: 457 HNPE-----------------------------------------YDELILSAGTDSAVN 513 +P+ I SAG+D V Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVK 211 Query: 514 LWLAKV 531 +W +V Sbjct: 212 VWDVRV 217
>WD51B_HUMAN (Q8TC44) WD-repeat protein 51B| Length = 478 Score = 38.5 bits (88), Expect = 0.017 Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 43/186 (23%) Frame = +1 Query: 103 DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFW--DLRS 276 D + LWN P ++ + + G D++ +++ + PH + + D ++ W D R Sbjct: 39 DTFLMLWNFKPHARAYRYV--GHKDVVTSVQ---FSPHGNLLASASRDRTVRLWIPDKRG 93 Query: 277 MKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVR 456 A +R VD++ Q +ATA ++ I++W + + L L H+HW + Sbjct: 94 KFSEFKAHTAPVRSVDFSADGQ-FLATASEDKSIKVWSMYRQRF-LYSLYRHTHWVRCAK 151 Query: 457 HNPE-----------------------------------------YDELILSAGTDSAVN 513 +P+ I SAG+D V Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVK 211 Query: 514 LWLAKV 531 +W +V Sbjct: 212 VWDVRV 217
>APAF_MOUSE (O88879) Apoptotic protease-activating factor 1 (Apaf-1)| Length = 1249 Score = 38.5 bits (88), Expect = 0.017 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEHAHIRDVDY----NPKKQNIIATAEDEFGIRLWDLRMLKHP 411 D + WD + K + + H V+ N ++AT ++F ++LWDL K Sbjct: 678 DKKVKIWDSATGKLVHTYDE-HSEQVNCCHFTNSSNHLLLATGSNDFFLKLWDLNQ-KEC 735 Query: 412 LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + GH++ R +P+ DEL+ S D + LW Sbjct: 736 RNTMFGHTNSVNHCRFSPD-DELLASCSADGTLRLW 770
>AAC3_DICDI (P14197) AAC-rich mRNA clone AAC3 protein (Fragment)| Length = 437 Score = 38.1 bits (87), Expect = 0.023 Identities = 25/111 (22%), Positives = 46/111 (41%) Frame = +1 Query: 202 AWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIR 381 AW+ + ++ +D + W+ + SN +++ + N K NI T E Sbjct: 131 AWNANGTKIASSGSDGIVRVWNFDPLGNSNNNNNSN--NTSSNSKNNNIKETIE------ 182 Query: 382 LWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 L GH + +P+ ++L+ SAGTD + +W K+G Sbjct: 183 -------------LKGHDGSIEKISWSPKNNDLLASAGTDKVIKIWDVKIG 220
>WDR17_HUMAN (Q8IZU2) WD-repeat protein 17| Length = 1322 Score = 38.1 bits (87), Expect = 0.023 Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 4/157 (2%) Frame = +1 Query: 61 WWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATI 240 W P G + F+WN+ + K+I + + + AW + +AT Sbjct: 444 WAPGGLNCIAGGTSRNGAFIWNV----QKGKIIQRFNEHGTNGIFCIAWSHKDSKRIATC 499 Query: 241 TDSSLHFWDLRSMKRSNAIEHAHIRDV---DYNPKKQNIIATAEDEFGIRLWDLRMLK-H 408 SS F +R++ ++ H V D++ +++IAT ++ +R++ + Sbjct: 500 --SSDGFCIIRTIDGKVLHKYKHPAAVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQ 557 Query: 409 PLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 PLK GH+ + V+ +P + ++ S D V +W Sbjct: 558 PLKVFSGHTAKVFHVKWSPLREGILCSGSDDGTVRIW 594 Score = 34.3 bits (77), Expect = 0.33 Identities = 18/78 (23%), Positives = 37/78 (47%) Frame = +1 Query: 304 AHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELI 483 A + V ++P ++ I+ + D+ +R+WD + L GH+ + N E L+ Sbjct: 567 AKVFHVKWSPLREGILCSGSDDGTVRIWDYTQ-DACINILNGHTAPVRGLMWNTEIPYLL 625 Query: 484 LSAGTDSAVNLWLAKVGS 537 +S D + +W + G+ Sbjct: 626 ISGSWDYTIKVWDTREGT 643 Score = 31.6 bits (70), Expect = 2.1 Identities = 29/139 (20%), Positives = 60/139 (43%), Gaps = 3/139 (2%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN 189 + L HT K+ V W PL + DD + +W+ + +++ +A Sbjct: 557 QPLKVFSGHTAKVFHVKWSPLREGILCSGSDDGTVRIWDY-TQDACINILNGHTAP---- 611 Query: 190 LRGGAWDPH-NHNAVATITDSSLHFWDLRSMKRSNAI-EH-AHIRDVDYNPKKQNIIATA 360 +RG W+ + ++ D ++ WD R + + +H A + + +P + +A+ Sbjct: 612 VRGLMWNTEIPYLLISGSWDYTIKVWDTREGTCVDTVYDHGADVYGLTCHPSRPFTMASC 671 Query: 361 EDEFGIRLWDLRMLKHPLK 417 + +RLW L L P++ Sbjct: 672 SRDSTVRLWSLTALVTPVQ 690 Score = 30.8 bits (68), Expect = 3.6 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Frame = +1 Query: 223 NAVATITDSSLHFWDLRSMKRSNAIEHAHIR---DVDYNPKKQNIIATAEDEFGIRLWDL 393 +AV D + +D+ + K + H+ D + P N++ATA + I++WD+ Sbjct: 364 HAVCCFLDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDDPNLLATASFDGTIKVWDI 423 Query: 394 RML 402 L Sbjct: 424 NTL 426
>WDR57_PONPY (Q5RF51) WD-repeat protein 57| Length = 357 Score = 38.1 bits (87), Expect = 0.023 Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 7/175 (4%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNL 192 + L H ++ C + P G L S DR I LWN+ G+ L Sbjct: 59 IMLLSGHEGEVYCCKFHPNGS--TLASAGFDRLILLWNVYGDC--------GNYATLKGY 108 Query: 193 RGGAWDPHNHNAVATI----TDSSLHFWDLRSMKRSNAIE-HAHIRDVDYNPKK-QNIIA 354 G + H + + + TD ++ WD + +R ++ H + Y ++ ++ Sbjct: 109 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 168 Query: 355 TAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 T D+ ++LWD+R K +++ AV N D+ I+S G D+ + +W Sbjct: 169 TGSDDGTVKLWDIR--KKAAIQTFQNTYQVLAVTFNDTSDQ-IISGGIDNDIKVW 220 Score = 31.6 bits (70), Expect = 2.1 Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 5/94 (5%) Frame = +1 Query: 103 DRNIFLWNIDP---SNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLR 273 D + +W++ P + K+ + NL +W P A D S+ WD Sbjct: 256 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRSVCVWDTT 315 Query: 274 SMKRSNAIE-HA-HIRDVDYNPKKQNIIATAEDE 369 S + + HA I +V ++P + II+ + D+ Sbjct: 316 SRRILYKLPGHAGSINEVAFHPDEPIIISASSDK 349
>POP1_SCHPO (P87060) WD-repeat protein pop1| Length = 775 Score = 38.1 bits (87), Expect = 0.023 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 8/117 (6%) Frame = +1 Query: 208 DPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNII--ATAEDEFGIR 381 +P ++ TD+ + W+L S + + H H V QNI+ A+A + +R Sbjct: 626 NPSRQQCISAGTDAKIRIWNLESGELLQTL-HGHSNLVSQVTFNQNILVSASAPPDTSLR 684 Query: 382 LWDLR------MLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 +WDL +LK PL GH + ++DE + +G+ S + LW + G Sbjct: 685 VWDLNTGSCRDILKCPL----GHIFF--------QHDESKVVSGSHSTLQLWDIRSG 729
>COR1B_RABIT (Q9XS70) Coronin-1B (Coroninse) (Coronin-like protein pp66)| Length = 486 Score = 38.1 bits (87), Expect = 0.023 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPEY 471 + D+++ P +IA+ ++ + +W + L P+ L GH+ V +P Sbjct: 85 VLDIEWCPHNDGVIASGSEDCTVMVWQIPEDGLTSPLTEPVVVLEGHTKRVGIVTWHPTA 144 Query: 472 DELILSAGTDSAVNLW 519 ++LSAG D+ V +W Sbjct: 145 RNVLLSAGCDNVVLIW 160 Score = 31.6 bits (70), Expect = 2.1 Identities = 30/144 (20%), Positives = 58/144 (40%), Gaps = 9/144 (6%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPN 189 E + L+ HT ++ V W P ++ L + D + +WN+ + + ++ S D++ N Sbjct: 123 EPVVVLEGHTKRVGIVTWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSL-HPDLIYN 181 Query: 190 LRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAE-- 363 + +W+ + + D S+ D R E AH P + +A + Sbjct: 182 V---SWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREKAH---EGARPMRAIFLADGKVF 235 Query: 364 -------DEFGIRLWDLRMLKHPL 414 E + LWD L+ P+ Sbjct: 236 TTGFSRMSERQLALWDPENLEEPM 259
>SOF1_YEAST (P33750) Protein SOF1| Length = 489 Score = 37.7 bits (86), Expect = 0.030 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 13/112 (11%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRG-----------GAWDPHNHNAVATITD 246 DD+ + LW+I+ + S K S D + N G D H N+ Sbjct: 141 DDKTVKLWSINVDDYSNKNSSDN--DSVTNEEGLIRTFDGESAFQGIDSHRENSTFATGG 198 Query: 247 SSLHFWDLRSMKRSNAIEHA--HIRDVDYNPKKQNIIATAEDEFGIRLWDLR 396 + +H WD+ +K + + +I + +N + +I+A+ + I L+DLR Sbjct: 199 AKIHLWDVNRLKPVSDLSWGADNITSLKFNQNETDILASTGSDNSIVLYDLR 250 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 1/102 (0%) Frame = +1 Query: 232 ATITDSSLHFWDLRSMKRSNAI-EHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKH 408 +T +D+S+ +DLR+ + I + + +NP + TA ++ +D+R L Sbjct: 237 STGSDNSIVLYDLRTNSPTQKIVQTMRTNAICWNPMEAFNFVTANEDHNAYYYDMRNLSR 296 Query: 409 PLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 L H V +P DE I++ D ++ ++ G Sbjct: 297 SLNVFKDHVSAVMDVDFSPTGDE-IVTGSYDKSIRIYKTNHG 337
>FZR_MOUSE (Q9R1K5) Fizzy-related protein homolog (Fzr) (Cdh1/Hct1 homolog)| Length = 493 Score = 37.7 bits (86), Expect = 0.030 Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 5/170 (2%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 L H ++ C L W +D + +WN + S + Q + + L ++ A Sbjct: 309 LQGHRQEV-CGLKWSTDHQLLASGGNDNKLLVWN----HSSLSPVQQYT-EHLAAVKAIA 362 Query: 205 WDPHNHNAVAT---ITDSSLHFWDLRSMKRSNAIE-HAHIRDVDYNPKKQNIIAT-AEDE 369 W PH H +A+ D + FW+ + + I+ + + ++ ++ +++T + Sbjct: 363 WSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQ 422 Query: 370 FGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 I +W L K L GHS+ + +P+ + ++ AG D + W Sbjct: 423 NQILVWKYPSLTQVAK-LTGHSYRVLYLAMSPDGEAIVTGAG-DETLRFW 470
>FZR_HUMAN (Q9UM11) Fizzy-related protein homolog (Fzr) (Cdh1/Hct1 homolog)| (hCDH1) (CDC20-like protein 1) Length = 496 Score = 37.7 bits (86), Expect = 0.030 Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 5/170 (2%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 L H ++ C L W +D + +WN + S + Q + + L ++ A Sbjct: 309 LQGHRQEV-CGLKWSTDHQLLASGGNDNKLLVWN----HSSLSPVQQYT-EHLAAVKAIA 362 Query: 205 WDPHNHNAVAT---ITDSSLHFWDLRSMKRSNAIE-HAHIRDVDYNPKKQNIIAT-AEDE 369 W PH H +A+ D + FW+ + + I+ + + ++ ++ +++T + Sbjct: 363 WSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQ 422 Query: 370 FGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 I +W L K L GHS+ + +P+ + ++ AG D + W Sbjct: 423 NQILVWKYPSLTQVAK-LTGHSYRVLYLAMSPDGEAIVTGAG-DETLRFW 470
>COR2A_HUMAN (Q92828) Coronin-2A (WD repeat-containing protein 2) (IR10)| Length = 525 Score = 37.4 bits (85), Expect = 0.039 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 6/77 (7%) Frame = +1 Query: 307 HIRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPE 468 ++ DV +NP IA+ ++ I++W + R L K+L GH+ V +P Sbjct: 84 NVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVEWHPT 143 Query: 469 YDELILSAGTDSAVNLW 519 ++ SAG D V +W Sbjct: 144 AANILFSAGYDYKVMIW 160
>TBL1R_MOUSE (Q8BHJ5) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like| 1X-related protein 1) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1) (TBL1-related protein 1) Length = 514 Score = 37.4 bits (85), Expect = 0.039 Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 13/124 (10%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDV-----------DYNPKKQN 345 WDP + + D +L W SMK+ N + AH +++ NP Sbjct: 357 WDPTGNLLASCSDDMTLKIW---SMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANL 413 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLA 525 ++A+A + +RLWD+ + L H ++V +P+ + S D V++W Sbjct: 414 MLASASFDSTVRLWDVDR-GICIHTLTKHQEPVYSVAFSPD-GRYLASGSFDKCVHIWNT 471 Query: 526 KVGS 537 + G+ Sbjct: 472 QTGA 475
>TBL1R_HUMAN (Q9BZK7) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like| 1X-related protein 1) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1) (TBL1-related protein 1) Length = 514 Score = 37.4 bits (85), Expect = 0.039 Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 13/124 (10%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDV-----------DYNPKKQN 345 WDP + + D +L W SMK+ N + AH +++ NP Sbjct: 357 WDPTGNLLASCSDDMTLKIW---SMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANL 413 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLA 525 ++A+A + +RLWD+ + L H ++V +P+ + S D V++W Sbjct: 414 MLASASFDSTVRLWDVDR-GICIHTLTKHQEPVYSVAFSPD-GRYLASGSFDKCVHIWNT 471 Query: 526 KVGS 537 + G+ Sbjct: 472 QTGA 475
>ERCC8_HUMAN (Q13216) DNA excision repair protein ERCC-8 (Cockayne syndrome WD| repeat protein CSA) Length = 396 Score = 37.4 bits (85), Expect = 0.039 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 6/111 (5%) Frame = +1 Query: 205 WDPHNHNAVATIT-DSSLHFWDLRSMKRSNAI---EHAHIRDVDYNPKKQNIIATAEDEF 372 W PH+ + + D +L WD +++ ++ E + + K ++A Sbjct: 107 WYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP 166 Query: 373 GIRLWDLRM--LKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 ++L DL+ H L+ GH AV +P YD ++ +A DS V LW Sbjct: 167 KVQLCDLKSGSCSHILQ---GHRQEILAVSWSPRYDYILATASADSRVKLW 214 Score = 35.8 bits (81), Expect = 0.11 Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 23/194 (11%) Frame = +1 Query: 28 DDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAW 207 D H + V W+P S D+ + +W+ + +AD+ N + Sbjct: 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ---------TADVF-NFEETVY 145 Query: 208 DPH------NHNAVATITDS-SLHFWDLRSMKRSNAIE--HAHIRDVDYNPKKQNIIATA 360 H H VA T + DL+S S+ ++ I V ++P+ I+ATA Sbjct: 146 SHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATA 205 Query: 361 EDEFGIRLWDLRMLKHPLKDLPGHS-HWTWAVR-----HNPEYDEL--------ILSAGT 498 + ++LWD+R L L H+ + AV HN + + L +L+ GT Sbjct: 206 SADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 Query: 499 DSAVNLWLAKVGSD 540 D+ + LW + G + Sbjct: 266 DNRMRLWNSSNGEN 279
>PRP46_CANAL (Q5A7Q3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 389 Score = 37.4 bits (85), Expect = 0.039 Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 5/150 (3%) Frame = +1 Query: 100 DDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSM 279 +D+++ W+++ SN A + L + P + D + WD+RS Sbjct: 148 EDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRSR 207 Query: 280 KRSNAIEHAHIRDV-----DYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWT 444 + + H D+ DYN + + T+ + IRLWDLR K L + HS Sbjct: 208 VEAMTLL-GHTNDITSIETDYNDPQ---VITSSMDGTIRLWDLRKSKTELL-ITNHSKSI 262 Query: 445 WAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 +++ +P+ + +S ++ + WL G Sbjct: 263 RSMKSHPK-EATFVSGDSNGEIKQWLLPKG 291
>KTNB1_BRARE (Q7ZUV2) Katanin p80 WD40-containing subunit B1 homolog| Length = 694 Score = 37.4 bits (85), Expect = 0.039 Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 2/127 (1%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR 195 +F HT +RC+ + P GK S DD + LW++ + S SA + Sbjct: 140 VFRYKGHTQAVRCLAFSPDGKWLASAS-DDSTVKLWDLIAGKMITEFTSHTSA-----VN 193 Query: 196 GGAWDPHNHNAVATITDSSLHFWDLR--SMKRSNAIEHAHIRDVDYNPKKQNIIATAEDE 369 + P+ + + D ++ WDL +M S+ E +R V +NP + + +E+ Sbjct: 194 VVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENT 253 Query: 370 FGIRLWD 390 + W+ Sbjct: 254 LRVYGWE 260
>YRIQ_CAEEL (P90794) Hypothetical WD-repeat protein D2030.9| Length = 571 Score = 37.4 bits (85), Expect = 0.039 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Frame = +1 Query: 250 SLHFWDLRSMKRSNAIEHAHIRDVD---YNPKKQNIIATAEDEFGIRLWDLRMLK----H 408 S+H +D+ +R I +AH DV+ + N+I +A D+ +++WD R Sbjct: 291 SIHVFDVEQRRRIRTIVNAHEDDVNSVCFADLGSNLIYSAGDDGLVKVWDKRAWSDGDVE 350 Query: 409 PLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSDDSGPES 558 P+ GH V + + +LS D + +W + S+ SG E+ Sbjct: 351 PVGVFAGHRDGVTHVDSRQD-ERYLLSNSKDQTIKVWDLRKFSNMSGVEA 399
>APAF_RAT (Q9EPV5) Apoptotic protease-activating factor 1 (Apaf-1)| Length = 1249 Score = 37.0 bits (84), Expect = 0.051 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 4/96 (4%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEHAHIRDVDY----NPKKQNIIATAEDEFGIRLWDLRMLKHP 411 D + WD + K + E H V+ N ++AT ++ ++LWDL K Sbjct: 678 DKKVKIWDSGTGKLVHTYEE-HSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQ-KEC 735 Query: 412 LKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + GH++ R +P+ DEL+ S D + LW Sbjct: 736 RNTMFGHTNSVTHCRFSPD-DELLASCSADGTLKLW 770
>CORO_CAEEL (Q21624) Coronin-like protein cor-1| Length = 605 Score = 37.0 bits (84), Expect = 0.051 Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 9/93 (9%) Frame = +1 Query: 316 DVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPEYDE 477 +V ++P N+IA+ ++ ++W + R L P +L GH + +P + Sbjct: 84 EVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAWHPVANN 143 Query: 478 LILSAGTDSAVNLWLAKVGS---DDSGPESPFW 567 ++L+AG ++ + +W G + SG W Sbjct: 144 VLLTAGGENVMFMWNVGTGEALLEISGHPDQIW 176 Score = 34.3 bits (77), Expect = 0.33 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 10/97 (10%) Frame = +1 Query: 202 AWDPHNHNAVATIT-DSSLHFWDL--RSMKRS---NAIE----HAHIRDVDYNPKKQNII 351 AW P N N +A+ + D++ W + R + R+ A+E + + ++P N++ Sbjct: 86 AWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAWHPVANNVL 145 Query: 352 ATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHN 462 TA E + +W++ L ++ GH W++ N Sbjct: 146 LTAGGENVMFMWNVG-TGEALLEISGHPDQIWSINFN 181
>HIRA_FUGRU (O42611) HIRA protein (TUP1-like enhancer of split protein 1)| Length = 1025 Score = 37.0 bits (84), Expect = 0.051 Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 23/166 (13%) Frame = +1 Query: 10 EQLFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWN----IDPS------NKSAKVI 159 + L +D+H + CV W G + DD+ + +W I PS NK A V Sbjct: 61 KMLCQMDNHLACVNCVRWSNNGLY-LASGGDDKLVMVWKRAALIGPSTVFGSSNKLANVE 119 Query: 160 SQGSADMLPNLRGG----AWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAH---IRD 318 +L N G +W PH+ + D+++ W+ R H ++ Sbjct: 120 QWRCVTILRNHTGDVMDVSWSPHDVWLASCSVDNTIVIWNARKFPEMVTCLRGHTGLVKG 179 Query: 319 VDYNPKKQNIIATAEDEFGIRLW---DLRM---LKHPLKDLPGHSH 438 + ++P + IA+ D+ +R+W D +M + P + G +H Sbjct: 180 LTWDPVGK-YIASQADDHSLRVWRTVDWQMEANITKPFSECGGTTH 224
>COR2A_MOUSE (Q8C0P5) Coronin-2A| Length = 524 Score = 37.0 bits (84), Expect = 0.051 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Frame = +1 Query: 307 HIRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPE 468 ++ D+ +NP IA+ ++ I++W++ R L K+L GH+ V +P Sbjct: 84 NVLDIKWNPFNDFEIASCSEDATIKIWNIPKQLLTRNLTTYRKELIGHARRVGLVEWHPT 143 Query: 469 YDELILSAGTDSAVNLW 519 ++ SAG D V +W Sbjct: 144 TANILFSAGYDYKVMVW 160
>WS17_SCHMA (Q26544) WD-repeat protein SL1-17| Length = 301 Score = 36.6 bits (83), Expect = 0.066 Identities = 20/70 (28%), Positives = 40/70 (57%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILS 489 +R V ++P + ++A+A D+ I+++D+R + + L GH W +V + L+ + Sbjct: 189 VRSVSFSPDGR-LLASASDDKQIKVFDVRDGRLVIPSLNGHKGWVVSVDFASDNRHLV-T 246 Query: 490 AGTDSAVNLW 519 A TD +V +W Sbjct: 247 ASTDCSVRIW 256
>CORO7_HUMAN (P57737) Coronin-7 (70 kDa WD repeat tumor rejection antigen| homolog) Length = 925 Score = 36.2 bits (82), Expect = 0.087 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Frame = +1 Query: 304 AHIRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNP 465 A + D+ ++P + +A A ++ IRLW + +L P L GH+ ++R +P Sbjct: 545 AAVTDLAWDPFDPHRLAVAGEDARIRLWRVPAEGLEEVLTTPETVLTGHTEKICSLRFHP 604 Query: 466 EYDELILSAGTDSAVNLWLAKVGSD 540 ++ S+ D V +W + G+D Sbjct: 605 LAANVLASSSYDLTVRIWDLQAGAD 629
>SLP1_SCHPO (P78972) WD-repeat-containing protein slp1| Length = 488 Score = 36.2 bits (82), Expect = 0.087 Identities = 30/144 (20%), Positives = 60/144 (41%), Gaps = 2/144 (1%) Frame = +1 Query: 103 DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMK 282 +RN+++WN D S V + D + W + + + +D+ S Sbjct: 199 ERNVYVWNAD----SGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT 254 Query: 283 --RSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVR 456 R+ A A + + +N ++++++ I D+R+ H + L GHS + Sbjct: 255 KLRTMAGHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLA 311 Query: 457 HNPEYDELILSAGTDSAVNLWLAK 528 + +L S G D+ V +W A+ Sbjct: 312 WRSDGLQL-ASGGNDNVVQIWDAR 334
>KMHB_DICDI (P90648) Myosin heavy chain kinase B (EC 2.7.11.7) (MHCK B)| Length = 732 Score = 36.2 bits (82), Expect = 0.087 Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 14/173 (8%) Frame = +1 Query: 43 KIRCVLWWPLGKHDK---LISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDP 213 K+RC+ + L HDK + ++D+ +F + S+K+ KV + + L A Sbjct: 531 KLRCI--FTLEGHDKPVHTVLLNDKYLFSGS---SDKTIKVWDLKTLECKYTLESHA--- 582 Query: 214 HNHNAVATI-----------TDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATA 360 AV T+ D ++ WDL++ R N H + V + + Sbjct: 583 ---RAVKTLCISGQYLFSGSNDKTIKVWDLKTF-RCNYTLKGHTKWVTTICILGTNLYSG 638 Query: 361 EDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + IR+W+L+ L+ L GH W V H D+L+ +A D+ + +W Sbjct: 639 SYDKTIRVWNLKSLECSAT-LRGHDRW---VEHMVICDKLLFTASDDNTIKIW 687
>DNAI2_HUMAN (Q9GZS0) Dynein intermediate chain 2, axonemal (Axonemal dynein| intermediate chain 2) Length = 605 Score = 36.2 bits (82), Expect = 0.087 Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Frame = +1 Query: 241 TDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAEDEF--------------GI 378 TD + +WD+R M + I D+ + +N + EF GI Sbjct: 285 TDGQVMWWDIRKMSEPTEVV---ILDITKKEQLENALGAISLEFESTLPTKFMVGTEQGI 341 Query: 379 RLWDLRMLKHPLKDL----PGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSDDS 546 + R K + + PGH +A++ NP Y + L+ G W A++ S+DS Sbjct: 342 VISCNRKAKTSAEKIVCTFPGHHGPIYALQRNPFYPKNFLTVGD------WTARIWSEDS 395 Query: 547 GPESPFW 567 S W Sbjct: 396 RESSIMW 402
>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 657 Score = 36.2 bits (82), Expect = 0.087 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 2/127 (1%) Frame = +1 Query: 16 LFALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLR 195 +F HT +RC+ + P GK + DD + LW++ + KV+ + + P + Sbjct: 139 IFKYKSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDL----TAGKVMFEFTGHSGP-VN 192 Query: 196 GGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEH--AHIRDVDYNPKKQNIIATAEDE 369 + P + + +D ++ FWDL + IE +R + +NP + +D Sbjct: 193 VVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDS 252 Query: 370 FGIRLWD 390 + W+ Sbjct: 253 LRVYGWE 259
>REC14_SCHPO (Q09150) Meiotic recombination protein rec14| Length = 302 Score = 36.2 bits (82), Expect = 0.087 Identities = 22/70 (31%), Positives = 38/70 (54%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILS 489 +R V ++P ++A A D I ++D+ + + L GH+ W +AV NP D L+LS Sbjct: 190 VRSVAFSPGS-TLLAAAGDSKMITIYDV-LSGDQVGQLRGHAAWIFAVAFNPVGD-LLLS 246 Query: 490 AGTDSAVNLW 519 A + + +W Sbjct: 247 ADVEGKIKIW 256
>TAF73_SCHPO (O74319) Transcription initiation factor TFIID subunit taf73| (Transcription initiation factor TFIID 73 kDa subunit) (TAFII-73) Length = 642 Score = 35.8 bits (81), Expect = 0.11 Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 5/138 (3%) Frame = +1 Query: 223 NAVATITDSSLH---FWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGI-RLWD 390 NA T SS H WD+R+ H + + DE GI ++WD Sbjct: 498 NAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWD 557 Query: 391 LRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW-LAKVGSDDSGPESPFW 567 LR + + HS +++ + + +++++S G D+ VN W L + G +SP Sbjct: 558 LRSSNQHVSFVK-HSSIVYSLSFSYD-NKILVSGGADTDVNFWDLTYRNNLSDGEQSPLL 615 Query: 568 FTH*ARRTITELVY*LRR 621 F + TI + + RR Sbjct: 616 FNFKTKNTIIQNLSFTRR 633
>CORO7_MOUSE (Q9D2V7) Coronin-7 (70 kDa WD repeat tumor rejection antigen| homolog) Length = 922 Score = 35.8 bits (81), Expect = 0.11 Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 6/83 (7%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNPEY 471 + D+ ++P + +A A ++ IRLW + +L P L GH+ +++R +P Sbjct: 544 VMDLVWDPFDPHRLAVAGEDARIRLWRVPPGGLENVLTTPETVLTGHTEKIYSLRFHPLA 603 Query: 472 DELILSAGTDSAVNLWLAKVGSD 540 +++ S+ D V +W + G++ Sbjct: 604 ADVLASSSYDLTVRIWDLQTGAE 626 Score = 31.2 bits (69), Expect = 2.8 Identities = 26/133 (19%), Positives = 61/133 (45%), Gaps = 8/133 (6%) Frame = +1 Query: 55 VLWWPLGKHDKLISIDDRNIFLWNIDPSN-----KSAKVISQGSADMLPNLRGGAWDPHN 219 ++W P H ++ +D I LW + P + + + G + + +LR + P Sbjct: 547 LVWDPFDPHRLAVAGEDARIRLWRVPPGGLENVLTTPETVLTGHTEKIYSLR---FHPLA 603 Query: 220 HNAVATIT-DSSLHFWDLRSMKRSNAIE--HAHIRDVDYNPKKQNIIATAEDEFGIRLWD 390 + +A+ + D ++ WDL++ ++ I + ++P + + +D +R+++ Sbjct: 604 ADVLASSSYDLTVRIWDLQTGAERLKLQGHQDQIFSLAWSPDGKQLATVCKDGH-VRVYE 662 Query: 391 LRMLKHPLKDLPG 429 R PL++ PG Sbjct: 663 PRSSPLPLQEGPG 675 Score = 30.0 bits (66), Expect = 6.2 Identities = 21/84 (25%), Positives = 35/84 (41%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 L HT+KI + + PL S D + +W++ + K+ QG D + +L A Sbjct: 587 LTGHTEKIYSLRFHPLAADVLASSSYDLTVRIWDLQTGAERLKL--QGHQDQIFSL---A 641 Query: 205 WDPHNHNAVATITDSSLHFWDLRS 276 W P D + ++ RS Sbjct: 642 WSPDGKQLATVCKDGHVRVYEPRS 665
>CORO7_RAT (O35828) Coronin-7 (70 kDa WD repeat tumor rejection antigen)| (Fragment) Length = 443 Score = 35.8 bits (81), Expect = 0.11 Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 8/179 (4%) Frame = +1 Query: 55 VLWWPLGKHDKLISIDDRNIFLWNIDPSN-----KSAKVISQGSADMLPNLRGGAWDPHN 219 ++W P H ++ +D I LW + P + + + G + + +LR + P Sbjct: 69 LVWDPFDPHRLAVAGEDARIRLWRVPPGGLKNILTTPETVLTGHTEKIYSLR---FHPLA 125 Query: 220 HNAVATIT-DSSLHFWDLRSMKRSNAIE--HAHIRDVDYNPKKQNIIATAEDEFGIRLWD 390 + +A+ + D ++ WDL++ ++ I + ++P + + +D +R++D Sbjct: 126 ADVLASSSYDLTIRIWDLQARTEQLRLQGHQDQIFSLAWSPDGKQLATVCKDG-RVRVYD 184 Query: 391 LRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSDDSGPESPFW 567 R PL+D PG PE S+G V W + ++ S S W Sbjct: 185 PRSSPLPLQDGPG-----------PEGGRGAASSGCVMVVVCWYLVLTAEVSASCSCTW 232 Score = 34.3 bits (77), Expect = 0.33 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Frame = +1 Query: 304 AHIRDVDYNPKKQNIIATAEDEFGIRLWDL------RMLKHPLKDLPGHSHWTWAVRHNP 465 A + D+ ++P + +A A ++ IRLW + +L P L GH+ +++R +P Sbjct: 64 AAVMDLVWDPFDPHRLAVAGEDARIRLWRVPPGGLKNILTTPETVLTGHTEKIYSLRFHP 123 Query: 466 EYDELILSAGTDSAVNLW 519 +++ S+ D + +W Sbjct: 124 LAADVLASSSYDLTIRIW 141 Score = 31.6 bits (70), Expect = 2.1 Identities = 22/84 (26%), Positives = 35/84 (41%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 L HT+KI + + PL S D I +W++ + ++ QG D + +L A Sbjct: 109 LTGHTEKIYSLRFHPLAADVLASSSYDLTIRIWDLQARTEQLRL--QGHQDQIFSL---A 163 Query: 205 WDPHNHNAVATITDSSLHFWDLRS 276 W P D + +D RS Sbjct: 164 WSPDGKQLATVCKDGRVRVYDPRS 187
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 35.8 bits (81), Expect = 0.11 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 1/134 (0%) Frame = +1 Query: 121 WNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIE 300 W++D + K+++ GS D L W + N+VA+I Sbjct: 517 WSVDFNLMDPKLLASGSDDAKVKL----WSTNLDNSVASIEAK----------------- 555 Query: 301 HAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYD-E 477 A++ V ++P + +A + + +DLR K P+ GH AV + E Sbjct: 556 -ANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRK---AVSYAKFVSGE 611 Query: 478 LILSAGTDSAVNLW 519 I+SA TDS + LW Sbjct: 612 EIVSASTDSQLKLW 625
>TBLX_MOUSE (Q9QXE7) F-box-like/WD-repeat protein TBL1X (Transducin beta-like| 1X protein) Length = 527 Score = 35.8 bits (81), Expect = 0.11 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 13/124 (10%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDV-----------DYNPKKQN 345 WDP + D +L W SMK+ + AH +++ NP Sbjct: 370 WDPSGMLLASCSDDMTLKIW---SMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNI 426 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLA 525 ++A+A + +RLWD+ + L H ++V +P+ + + S D V++W Sbjct: 427 MLASASFDSTVRLWDVER-GVCIHTLTKHQEPVYSVAFSPD-GKYLASGSFDKCVHIWNT 484 Query: 526 KVGS 537 + GS Sbjct: 485 QSGS 488
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 35.8 bits (81), Expect = 0.11 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 1/134 (0%) Frame = +1 Query: 121 WNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIE 300 W++D + K+++ GS D L W + N+VA+I Sbjct: 519 WSVDFNLMDPKLLASGSDDAKVKL----WSTNLDNSVASIEAK----------------- 557 Query: 301 HAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYD-E 477 A++ V ++P + +A + + +DLR K P+ GH AV + E Sbjct: 558 -ANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRK---AVSYAKFVSGE 613 Query: 478 LILSAGTDSAVNLW 519 I+SA TDS + LW Sbjct: 614 EIVSASTDSQLKLW 627
>TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transducin beta-like| 1Y protein) (Transducin-beta-like 1, Y-linked) Length = 522 Score = 35.4 bits (80), Expect = 0.15 Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 15/126 (11%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDV-----------DYNPKKQN 345 WDP + D +L W SMK+ + AH +++ NP Sbjct: 367 WDPSGMLLASCSDDMTLKIW---SMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSI 423 Query: 346 IIATAEDEFGIRLWDLR--MLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 ++A+A + +RLWD+ + H L H ++V +P+ + + S D V++W Sbjct: 424 MLASASFDSTVRLWDVEQGVCTHTLMK---HQEPVYSVAFSPD-GKYLASGSFDKYVHIW 479 Query: 520 LAKVGS 537 + GS Sbjct: 480 NTQSGS 485 Score = 29.6 bits (65), Expect = 8.1 Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 3/111 (2%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRS--MKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGI 378 W+ + ++ D + WD + K+ A DVD+ QN + A + Sbjct: 284 WNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW----QNNMTFASCSTDM 339 Query: 379 RLWDLRM-LKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAK 528 + R+ HP+K GH++ A++ +P L+ S D + +W K Sbjct: 340 CIHVCRLGCDHPVKTFQGHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMK 389
>CSTF1_RAT (Q5BJQ6) Cleavage stimulation factor, 50 kDa subunit (CSTF 50 kDa| subunit) (CF-1 50 kDa subunit) (CstF-50) Length = 431 Score = 35.4 bits (80), Expect = 0.15 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 10/180 (5%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ--GSADMLPNLRG 198 L DH D++ C+ + P +++++ R+ L D S SAK + A+ML ++ Sbjct: 169 LYDHVDEVTCLAFHPT---EQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSI-- 223 Query: 199 GAWDPHNHNAVATITDSSLHFWDLRSMKRSNAI----EHAH-IRDVDYNPKKQNIIATAE 363 ++ P + +L +D+ + + + +H I V+YNP N+ T Sbjct: 224 -SFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSA-NMYVTGS 281 Query: 364 DEFGIRLWD---LRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 + I+LWD R + K G + N +Y ILS+G DS LW G Sbjct: 282 KDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKY---ILSSGKDSVAKLWEISTG 338
>CSTF1_MOUSE (Q99LC2) Cleavage stimulation factor, 50 kDa subunit (CSTF 50 kDa| subunit) (CF-1 50 kDa subunit) (CstF-50) Length = 431 Score = 35.4 bits (80), Expect = 0.15 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 10/180 (5%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ--GSADMLPNLRG 198 L DH D++ C+ + P +++++ R+ L D S SAK + A+ML ++ Sbjct: 169 LYDHVDEVTCLAFHPT---EQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSI-- 223 Query: 199 GAWDPHNHNAVATITDSSLHFWDLRSMKRSNAI----EHAH-IRDVDYNPKKQNIIATAE 363 ++ P + +L +D+ + + + +H I V+YNP N+ T Sbjct: 224 -SFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSA-NMYVTGS 281 Query: 364 DEFGIRLWD---LRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 + I+LWD R + K G + N +Y ILS+G DS LW G Sbjct: 282 KDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKY---ILSSGKDSVAKLWEISTG 338
>GBLP_ORENI (O42249) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C) (RACK) Length = 317 Score = 35.4 bits (80), Expect = 0.15 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 421 LPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L GHS W + P+Y ++ILSA D ++ +W Sbjct: 11 LKGHSGWVTQIATTPKYPDMILSASRDKSIIMW 43
>CORO_DICDI (P27133) Coronin (p55)| Length = 445 Score = 35.4 bits (80), Expect = 0.15 Identities = 16/83 (19%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDLR------MLKHPLKDLPGHSHWTWAVRHNPEY 471 + D+ ++P +N++ + ++ I +W + + PL+ L GH + P Sbjct: 82 VLDIAFHPFNENLVGSVSEDCNICIWGIPEGGLTDSISTPLQTLSGHKRKVGTISFGPVA 141 Query: 472 DELILSAGTDSAVNLWLAKVGSD 540 D + +++ D V W + G + Sbjct: 142 DNVAVTSSGDFLVKTWDVEQGKN 164
>WDR36_HUMAN (Q8NI36) WD repeat-containing protein 36 (T-cell activation WD| repeat-containing protein) (TA-WDRP) Length = 951 Score = 35.0 bits (79), Expect = 0.19 Identities = 24/111 (21%), Positives = 52/111 (46%) Frame = +1 Query: 187 NLRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAED 366 ++RG A D N V T ++ L FW+ ++ +++ + ++ + I+ A D Sbjct: 541 SVRGVAVDGLNQLTVTTGSEGLLKFWNFKNKILIHSVSLSSSPNIMLLHRDSGILGLALD 600 Query: 367 EFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 +F I + D+ K +++ GH + +P+ ++SA D ++ W Sbjct: 601 DFSISVLDIETRK-IVREFSGHQGQINDMAFSPD-GRWLISAAMDCSIRTW 649
>UTP13_SCHPO (Q9USN3) Probable U3 small nucleolar RNA-associated protein 13 (U3| snoRNA-associated protein 13) Length = 777 Score = 35.0 bits (79), Expect = 0.19 Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 13/152 (8%) Frame = +1 Query: 103 DRNIFLWNIDPSNKSAKVIS--QGSADMLPNLRGGAWDPHNHNA--VATITDSSLHFWDL 270 D + LWN++ + K I G + + G D + + ++ D +L ++L Sbjct: 385 DNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNL 444 Query: 271 RSMKRSNAIEH-------AHIRDVD--YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDL 423 S + + AH RDV+ K IIA+A + I+LWD + L Sbjct: 445 GSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWD-SSTGEVVGVL 503 Query: 424 PGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 GH WA NP + + S D + +W Sbjct: 504 RGHRRGVWACSFNP-FSRQLASGSGDRTIRIW 534 Score = 33.1 bits (74), Expect = 0.73 Identities = 35/166 (21%), Positives = 71/166 (42%), Gaps = 14/166 (8%) Frame = +1 Query: 64 WPLGKHDK-----LISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRG---GAW---- 207 W + HD+ +S D R I + D K+ K+ + +++ LRG G W Sbjct: 459 WTIKAHDRDVNAIQVSKDGRIIASASQD---KTIKLWDSSTGEVVGVLRGHRRGVWACSF 515 Query: 208 DPHNHNAVATITDSSLHFWDLRSMKRSNAIEH--AHIRDVDYNPKKQNIIATAEDEFGIR 381 +P + + D ++ W++ + + +E I + Y + +++ A D ++ Sbjct: 516 NPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGL-VK 574 Query: 382 LWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 +W L + L H WA+ + L++S G D+ V++W Sbjct: 575 VWSLSS-GECVATLDNHEDRVWALASRFD-GSLLVSGGADAVVSVW 618 Score = 30.4 bits (67), Expect = 4.8 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 3/110 (2%) Frame = +1 Query: 208 DPHNHNAVATITDSSLHFWDLRSMKRSNAIE-HAHIRDVDYNPKKQN--IIATAEDEFGI 378 DP N + + WD+ +++ H + K QN ++A+ D+ + Sbjct: 112 DPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRV 171 Query: 379 RLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAK 528 RLWDL + GHS + P +LS D V +W K Sbjct: 172 RLWDLNS-SRSMAVFEGHSSVIRGLTFEPT-GSFLLSGSRDKTVQVWNIK 219
>TBL1X_HUMAN (O60907) F-box-like/WD-repeat protein TBL1X (Transducin beta-like| 1X protein) (Transducin-beta-like 1, X-linked) (SMAP55) Length = 526 Score = 35.0 bits (79), Expect = 0.19 Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 15/126 (11%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDV-----------DYNPKKQN 345 WDP + D +L W SMK+ I AH +++ NP Sbjct: 369 WDPSGMLLASCSDDMTLKIW---SMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNI 425 Query: 346 IIATAEDEFGIRLWDLR--MLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 ++A+A + +RLWD+ + H L H ++V +P+ + + S D V++W Sbjct: 426 MLASASFDSTVRLWDIERGVCTHTLTK---HQEPVYSVAFSPD-GKYLASGSFDKCVHIW 481 Query: 520 LAKVGS 537 + G+ Sbjct: 482 NTQSGN 487
>CAC2_YEAST (Q04199) Chromatin assembly factor 1 subunit p60 (CAF-1 60 kDa| subunit) Length = 468 Score = 35.0 bits (79), Expect = 0.19 Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 30/150 (20%) Frame = +1 Query: 7 LEQLFALDDHTDKIRCVLWWPLGKHDKLISI-DDRNIFLWNI-DPSNKSAKVISQGSAD- 177 L+ L +L H I + + K D L S DD + LW DP+ + V+ D Sbjct: 61 LDFLGSLTHHEQAINVIRF--NSKGDVLASAGDDGQVLLWKQEDPNTQQESVVRPFGMDA 118 Query: 178 -------------MLPNLRGG------------AWDPHNHNAVATITDSSLHFWDL-RSM 279 + LRGG AW P N N V D+S+ +D+ M Sbjct: 119 ETSEADENKEKWVVWKRLRGGSGATAAAEIYDLAWSPDNRNIVVACMDNSIRLFDVGAGM 178 Query: 280 KRSNAIEHAH-IRDVDYNPKKQNIIATAED 366 +H H ++ V ++P Q I++ + D Sbjct: 179 LVCGQSDHGHYVQGVAWDPLNQFILSQSAD 208 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Frame = +1 Query: 79 HDKLISIDDRNIFLWNIDPSNK----SAKVISQGSADMLPNLRGGAWDPHNHNAVATITD 246 +D S D+RNI + +D S + A ++ G +D ++G AWDP N ++ D Sbjct: 149 YDLAWSPDNRNIVVACMDNSIRLFDVGAGMLVCGQSDHGHYVQGVAWDPLNQFILSQSAD 208 Query: 247 SSLHFW 264 SLH + Sbjct: 209 RSLHVY 214
>YPR4_CAEEL (Q20059) Hypothetical WD-repeat protein F35G12.4| Length = 683 Score = 35.0 bits (79), Expect = 0.19 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 7/173 (4%) Frame = +1 Query: 22 ALDDHTDKIRCVLWWPLGKHDKLI--SIDDRNIFLWNIDPSNKSAKV-ISQGSADMLPNL 192 +L+ HTD + ++ L H K++ + +D + +WNI+ NK + + D + L Sbjct: 85 SLEQHTDWVNDMI---LCGHGKILISASNDTTVKVWNIERDNKHGFIDCIRTHKDYVSCL 141 Query: 193 RGGAWDPHNHNAVATITDSSLHFWDLRS-MKRSNAIEHAHIRDVDYN---PKKQNIIATA 360 A+ P AV+ D ++ +D+ + K N + +D Y+ +++ A Sbjct: 142 ---AYAPIVEKAVSASFDHNIFVYDINANFKTVNNL--IGCKDSIYSLATTPNLSLVLGA 196 Query: 361 EDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 E IRL+D R + +K L GH+ A+ N + LSAG+D+ + LW Sbjct: 197 GTEKCIRLFDPRTNEKIMK-LRGHTDNVRALVVNDDGTRA-LSAGSDATIRLW 247
>GBB_DICDI (P36408) Guanine nucleotide-binding protein beta subunit| Length = 347 Score = 35.0 bits (79), Expect = 0.19 Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 2/126 (1%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 L+ HT + C + L + S D LW+++ K + S + D++ + Sbjct: 146 LNSHTGYLSCCRF--LNDRQIVTSSGDMTCILWDVENGTKITE-FSDHNGDVM----SVS 198 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMK--RSNAIEHAHIRDVDYNPKKQNIIATAEDEFGI 378 P + ++ D++ WDLRS K ++ A I V Y P + T D+ Sbjct: 199 VSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLS-FGTGSDDASC 257 Query: 379 RLWDLR 396 RL+D+R Sbjct: 258 RLFDIR 263
>WDR1_CHICK (O93277) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| Length = 609 Score = 35.0 bits (79), Expect = 0.19 Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 4/179 (2%) Frame = +1 Query: 19 FALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRG 198 F L DHT + CV + P G S D + IF+++ K + + D + Sbjct: 185 FTLSDHTRFVNCVRFSPDGNRFATASADGQ-IFIYDGKTGEKVCALGGGKAHD--GGIYA 241 Query: 199 GAWDPHNHNAVATITDSSLHFWDLRS---MKRSNAIEHAHIRDVDYNPKKQNIIATAEDE 369 +W P + ++ D + WD+ + + N + + + +K ++++ + Sbjct: 242 ISWSPDSSQLLSASGDKTAKIWDVGANSVVSTFNMGSNVLDQQLGCLWQKDHLLSLSLSG 301 Query: 370 FGIRLWDLRMLKHPLKDLPGHSHWTWAVR-HNPEYDELILSAGTDSAVNLWLAKVGSDD 543 + I D PL+ + GHS + H I S D +N W + G +D Sbjct: 302 Y-INYLDKNNPDKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSNDGHINYWDSDTGEND 359
>GBLP_LEIMA (Q25306) Guanine nucleotide-binding protein beta subunit-like| protein (Antigen LACK) Length = 312 Score = 35.0 bits (79), Expect = 0.19 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +1 Query: 355 TAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 TA + IR+WDLR + K L H+ AV +P+ D LI+SAG D+ + +W Sbjct: 82 TASWDRSIRMWDLRNGQCQRKFLK-HTKDVLAVAFSPD-DRLIVSAGRDNVIRVW 134
>GBLP_LEIIN (P62884) Guanine nucleotide-binding protein beta subunit-like| protein (Antigen LACK) (LiP36) (p36Li) Length = 312 Score = 35.0 bits (79), Expect = 0.19 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +1 Query: 355 TAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 TA + IR+WDLR + K L H+ AV +P+ D LI+SAG D+ + +W Sbjct: 82 TASWDRSIRMWDLRNGQCQRKFLK-HTKDVLAVAFSPD-DRLIVSAGRDNVIRVW 134
>GBLP_LEICH (P62883) Guanine nucleotide-binding protein beta subunit-like| protein (Antigen LACK) Length = 312 Score = 35.0 bits (79), Expect = 0.19 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +1 Query: 355 TAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 TA + IR+WDLR + K L H+ AV +P+ D LI+SAG D+ + +W Sbjct: 82 TASWDRSIRMWDLRNGQCQRKFLK-HTKDVLAVAFSPD-DRLIVSAGRDNVIRVW 134
>UTP13_YEAST (Q05946) U3 small nucleolar RNA-associated protein 13 (U3| snoRNA-associated protein 13) Length = 817 Score = 34.7 bits (78), Expect = 0.25 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 2/87 (2%) Frame = +1 Query: 265 DLRSMKRSNAIEHAHIRDVDYNPKKQN--IIATAEDEFGIRLWDLRMLKHPLKDLPGHSH 438 D++ +K S HAH +D++ N I ATA + ++W+L + L H Sbjct: 476 DVQIIKVSEYTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEAT-LANHKR 534 Query: 439 WTWAVRHNPEYDELILSAGTDSAVNLW 519 W V +YD+L+ ++ D V +W Sbjct: 535 GLWDVSFC-QYDKLLATSSGDKTVKIW 560
>TB1RB_XENLA (Q6GPC6) F-box-like/WD-repeat-containing protein TBL1XR1-B| (Transducin beta-like 1X-related homolog 1-B) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1-B) (TBL1-related protein 1-B) Length = 522 Score = 34.7 bits (78), Expect = 0.25 Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 13/124 (10%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDV-----------DYNPKKQN 345 WDP + + D +L W SMK + AH +++ NP Sbjct: 365 WDPTGNLLASCSDDMTLKIW---SMKHDTCVHDLQAHNKEIYTIKWSPTGPGTNNPNANL 421 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLA 525 ++A+A + +RLWD+ + L H ++V +P+ + S D V++W Sbjct: 422 MLASASFDSTVRLWDVDR-GICIHTLTKHQEPVYSVAFSPD-GRYLASGSFDKCVHIWNT 479 Query: 526 KVGS 537 + G+ Sbjct: 480 QTGA 483
>PRP17_YEAST (P40968) Pre-mRNA-splicing factor PRP17 (Cell division control| protein 40) Length = 455 Score = 34.7 bits (78), Expect = 0.25 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +1 Query: 403 KHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 K +++ PGH T A++ P+ LILS G D + +W Sbjct: 152 KKVIRNYPGHPEGTTALKFLPKTGHLILSGGNDHTIKIW 190 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/68 (27%), Positives = 34/68 (50%) Frame = +1 Query: 331 PKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAV 510 PK ++I + ++ I++WD L+D GH+ A+R E + LS+ D +V Sbjct: 172 PKTGHLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRFT-EDCQSFLSSSFDRSV 230 Query: 511 NLWLAKVG 534 +W + G Sbjct: 231 KIWDTETG 238
>WDR31_MOUSE (Q9JHB4) WD-repeat protein 31 (Spermatid WD-repeat protein) (spWD)| Length = 367 Score = 34.7 bits (78), Expect = 0.25 Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 16/166 (9%) Frame = +1 Query: 103 DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWDPHNHNAVATITDSSLHFWDLRSMK 282 D ++ LW++ + + S +++ +L W P V T D ++ WD R ++ Sbjct: 167 DNSLLLWDVGTGQCVER--ASVSRNLVTHL---CWVPSEPYIVQTSEDKTIRLWDSRGLQ 221 Query: 283 RSNAI-EHAHIRDVDYNPKKQNIIATAEDEFG-----IRLWDLRMLKHPLKDLPGHSHWT 444 ++ HI+ + + FG LWDLR + + + GH Sbjct: 222 MAHMFPTKQHIQTHCEVSVDGHTCISCSSGFGGEGCEATLWDLRQTRDRMCEYKGHFQTV 281 Query: 445 WAVRHNPEYDEL---ILSAGTDSAVNLW-------LAKVGSDDSGP 552 + P+ L I ++ DS V +W L+ + D SGP Sbjct: 282 ASCVFLPKSTALMPMIATSAHDSKVKIWNQDTGACLSTLSLDGSGP 327 Score = 32.0 bits (71), Expect = 1.6 Identities = 21/83 (25%), Positives = 39/83 (46%) Frame = +1 Query: 271 RSMKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWA 450 R +KR E I + PK + + D+ + +WDL+ HP + L GH+ Sbjct: 94 RMVKRFTGHER-EITKIACIPKANQFFSASRDKT-VLMWDLQGSSHPRQQLSGHAMVVTG 151 Query: 451 VRHNPEYDELILSAGTDSAVNLW 519 + +P+ +L + D+++ LW Sbjct: 152 LAVSPDSSQL-CTGSRDNSLLLW 173
>PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20| Length = 606 Score = 34.7 bits (78), Expect = 0.25 Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 43/206 (20%) Frame = +1 Query: 31 DHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGAWD 210 DH I V + LG+ S+D + LW++ P+ K ++ +G D + +L AW Sbjct: 408 DHKQAIWSVRFHHLGEVVASGSLD-HTVRLWDL-PAGK-CRMALRGHVDSVNDL---AWQ 461 Query: 211 PHNHNAVATITDSSLHFWDLRS-MKRSNAIEHAH-IRDVDYNPKKQNIIATAEDEFGIRL 384 P + + +D ++ WD R+ + H + V +N + +T D ++L Sbjct: 462 PFSSSLATASSDKTVSVWDARAGLCTQTYYGHQNSCNGVSFNILGTQLASTDADGV-VKL 520 Query: 385 WDLRML---------KHPLK--------------------------------DLPGHSHW 441 WD RM KHP +L GH Sbjct: 521 WDTRMTAEVATINTGKHPANKSCFDRSGQVLAVACDDGKVKAYSTTDGVLQAELAGHEDA 580 Query: 442 TWAVRHNPEYDELILSAGTDSAVNLW 519 AV +P + ++S G+D+ LW Sbjct: 581 VQAVLFDPA-GQYLVSCGSDNTFRLW 605 Score = 31.6 bits (70), Expect = 2.1 Identities = 27/110 (24%), Positives = 43/110 (39%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRL 384 WD V T TD W +R H+ +V +A+ + +RL Sbjct: 395 WDFEKQRCVTTFTDHKQAIWSVR---------FHHLGEV---------VASGSLDHTVRL 436 Query: 385 WDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 WDL K + L GH + P + + +A +D V++W A+ G Sbjct: 437 WDLPAGKCRMA-LRGHVDSVNDLAWQP-FSSSLATASSDKTVSVWDARAG 484
>TB1RA_XENLA (Q7SZM9) F-box-like/WD-repeat-containing protein TBL1XR1-A| (Transducin beta-like 1X-related protein 1-A) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1-A) (TBL1-related protein 1-A) (xTBLR1) Length = 519 Score = 34.7 bits (78), Expect = 0.25 Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 13/124 (10%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIE--HAHIRDV-----------DYNPKKQN 345 WDP + + D +L W SMK + AH +++ NP Sbjct: 362 WDPTGNLLASCSDDMTLKIW---SMKHDTCVHDLQAHNKEIYTIKWSPTGPGTNNPNANL 418 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLA 525 ++A+A + +RLWD+ + L H ++V +P+ + S D V++W Sbjct: 419 MLASASFDSTVRLWDVDR-GICIHTLTKHQEPVYSVAFSPD-GRYLASGSFDKCVHIWNT 476 Query: 526 KVGS 537 + G+ Sbjct: 477 QTGA 480
>CSTF1_PONPY (Q5R8K2) Cleavage stimulation factor, 50 kDa subunit (CSTF 50 kDa| subunit) (CF-1 50 kDa subunit) (CstF-50) Length = 431 Score = 34.3 bits (77), Expect = 0.33 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 10/180 (5%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ--GSADMLPNLRG 198 L DH D++ C+ + P +++++ R+ L D S SAK + A+ML ++ Sbjct: 169 LYDHVDEVTCLAFHPT---EQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSI-- 223 Query: 199 GAWDPHNHNAVATITDSSLHFWDLRSMKRSNAI----EHAH-IRDVDYNPKKQNIIATAE 363 ++ P + +L +D+ + + + +HA I V+YN N+ T Sbjct: 224 -SFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHADAICSVNYN-SSANMYVTGS 281 Query: 364 DEFGIRLWD---LRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 + I+LWD R + K G + N +Y ILS+G DS LW G Sbjct: 282 KDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKY---ILSSGKDSVAKLWEISTG 338
>2ABB_ARATH (Q39247) Serine/threonine protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, beta isoform) (AtB beta) Length = 501 Score = 34.3 bits (77), Expect = 0.33 Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 22/141 (15%) Frame = +1 Query: 82 DKLISIDDRNIFLWNIDPSNKSAKVIS---QGSADMLPNLRGGAWDPHNHNAVA-TITDS 249 + IS DD + LWN++ SN+S ++ D+ + + P + N +A + + Sbjct: 235 ETFISADDLRVNLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPIHCNMLAYSSSKG 294 Query: 250 SLHFWDLRSM-----------------KRSNAIEH-AHIRDVDYNPKKQNIIATAEDEFG 375 S+ D+R RS E A I D+ ++ + I++ D Sbjct: 295 SIRLIDMRQSALCDSHTKLFEEPEAPGSRSFFTEIIASISDIKFSKDGRYILS--RDYMT 352 Query: 376 IRLWDLRMLKHPLKDLPGHSH 438 ++LWD+ M P+ H H Sbjct: 353 LKLWDINMDSGPVASYQVHEH 373
>CDC4_YEAST (P07834) Cell division control protein 4 (F-box protein CDC4) (E3| ubiquitin ligase complex SCF subunit CDC4) Length = 779 Score = 34.3 bits (77), Expect = 0.33 Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 17/143 (11%) Frame = +1 Query: 1 AQLEQLFALDDHTDKIRCVLWWPLGKHDKLISID---DRNIFLWNIDPS-NKSAKVISQG 168 AQ++ L+ L HTD+I ++ H++ I D I +W+++ N + Sbjct: 558 AQMKCLYILSGHTDRIYSTIY----DHERKRCISASMDTTIRIWDLENIWNNGECSYATN 613 Query: 169 SADMLPNLRGGAWDPHNHNA------------VATITDSSLHFWDLRSMKRSNAIEHAHI 312 SA + G + H A V+ D S+ WD R + H ++ Sbjct: 614 SASPCAKILGAMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNL 673 Query: 313 RDVDYNPKKQNIIAT-AEDEFGI 378 + NI+ + +E++F I Sbjct: 674 SAITTFYVSDNILVSGSENQFNI 696
>DIP2_YEAST (Q12220) DOM34-interacting protein 2 (U3 small nucleolar| RNA-associated protein 12) (U3 snoRNA-associated protein 12) Length = 943 Score = 34.3 bits (77), Expect = 0.33 Identities = 20/68 (29%), Positives = 37/68 (54%) Frame = +1 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLA 525 +I+T++D I+LWDL+ ++ H+ W + D+L+++ GTDS V +W Sbjct: 177 LISTSKDGM-IKLWDLKT-HQCIETHIAHTGECWGLAVK---DDLLITTGTDSQVKIWKL 231 Query: 526 KVGSDDSG 549 + +D G Sbjct: 232 DIENDKMG 239
>GBLP_ARATH (O24456) Guanine nucleotide-binding protein beta subunit-like| protein (WD-40 repeat auxin-dependent protein ARCA) Length = 327 Score = 33.9 bits (76), Expect = 0.43 Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 2/124 (1%) Frame = +1 Query: 28 DDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 + H D + CV + P ++S D+ + +WN+ SN + G + + A Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL--SNCKLRSTLAGHTGYVSTV---A 201 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIE-HAHIRDVDYNPKKQNIIATAEDEFGIR 381 P + D + WDL K+ ++E ++ I + ++P + + A E GI+ Sbjct: 202 VSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEH--GIK 259 Query: 382 LWDL 393 +WDL Sbjct: 260 IWDL 263
>GBLP_BRARE (O42248) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C) (RACK) Length = 317 Score = 33.9 bits (76), Expect = 0.43 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +1 Query: 421 LPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L GHS W + P++ ++ILSA D + +W Sbjct: 11 LKGHSGWVTQIATTPQFPDMILSASRDKTIIMW 43
>STRAP_HUMAN (Q9Y3F4) Serine-threonine kinase receptor-associated protein| (UNR-interacting protein) (WD-40 repeat protein PT-WD) (MAP activator with WD repeats) Length = 350 Score = 33.9 bits (76), Expect = 0.43 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Frame = +1 Query: 226 AVATITDSSLHFWDLRSMKRSNAIEHAHI-RDVDYNPKKQNIIATAEDEFGIRLWDLRML 402 A D + WD S + H HI + VD+ ++ +D+ +R++DL Sbjct: 74 AATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLLTGGQDKL-LRIYDLNKP 132 Query: 403 KHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + K++ GH+ E D+ ILSA D V LW Sbjct: 133 EAEPKEISGHTSGIKKALWCSE-DKQILSA-DDKTVRLW 169
>RIMM_COXBU (Q83E84) 16S rRNA-processing protein rimM| Length = 168 Score = 33.9 bits (76), Expect = 0.43 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +1 Query: 331 PKKQNIIATAEDEFGIRLW-DLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAG 495 P + II +G+R W + HP+ +L H TW ++HN E+ L L AG Sbjct: 3 PNDKVIIGRLARPYGLRGWIKVVSFTHPIDNLLNHP--TWQIQHNNEWQPLKLQAG 56
>WDR1_MOUSE (O88342) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| Length = 605 Score = 33.5 bits (75), Expect = 0.56 Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 4/180 (2%) Frame = +1 Query: 19 FALDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRG 198 F + DH+ + CV + P G S D + IF+++ K + + D + Sbjct: 182 FTIGDHSRFVNCVRFSPDGNRFATASADGQ-IFIYDGKTGEKVCALGESKAHD--GGIYA 238 Query: 199 GAWDPHNHNAVATITDSSLHFWDLR-SMKRSNAIEHAHIRDVDYNP--KKQNIIATAEDE 369 +W P + + ++ D + WD+ + S +++ D +K ++++ + Sbjct: 239 ISWSPDSTHLLSASGDKTSKIWDVNVNSVVSTFPMGSNVLDQQLGCLWQKDHLLSISLSG 298 Query: 370 FGIRLWDLRMLKHPLKDLPGHSHWTWAVR-HNPEYDELILSAGTDSAVNLWLAKVGSDDS 546 + I D PL+ + GHS + H I S D +N W ++ G +DS Sbjct: 299 Y-INYLDKNNPSKPLRVIKGHSKSIQCLTVHRNGGKSYIYSGSHDGHINYWDSETGENDS 357
>COPB2_YEAST (P41811) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| Length = 889 Score = 33.5 bits (75), Expect = 0.56 Identities = 17/71 (23%), Positives = 31/71 (43%) Frame = +1 Query: 307 HIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELIL 486 +IR + +P K +++ D+ ++LW+ + GH H+ V NP+ Sbjct: 99 YIRSIAVHPTKPYVLS-GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFA 157 Query: 487 SAGTDSAVNLW 519 S D V +W Sbjct: 158 SGCLDRTVKVW 168
>TLE6_MOUSE (Q9WVB3) Transducin-like enhancer protein 6 (Groucho-related| protein 6) Length = 581 Score = 33.5 bits (75), Expect = 0.56 Identities = 26/87 (29%), Positives = 40/87 (45%) Frame = +1 Query: 226 AVATITDSSLHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLK 405 A+A TD ++ WDLR+ + ++ + K NI D +R WDLRM K Sbjct: 402 ALAGFTDGTVRIWDLRTQEIVRNLKGPTNSARNLVVKDDNIWTGGLDAC-LRCWDLRMAK 460 Query: 406 HPLKDLPGHSHWTWAVRHNPEYDELIL 486 L+ L ++ H+P D L+L Sbjct: 461 VSLEHL--FQSQIMSLAHSPTEDWLLL 485
>ERCC8_BOVIN (Q5BIM8) DNA excision repair protein ERCC-8| Length = 397 Score = 33.5 bits (75), Expect = 0.56 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 16/108 (14%) Frame = +1 Query: 265 DLRSMKRSNAIE--HAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGH-- 432 DL+S S+ ++ I V ++P+ + I+ATA + +LWD+R L L H Sbjct: 172 DLKSGSCSHILQGHRQEILAVSWSPRYEYILATASADSRAKLWDVRRASGCLITLDQHNG 231 Query: 433 ----SHWTWAVRHNPEYDEL--------ILSAGTDSAVNLWLAKVGSD 540 + + HN + + L +L+ GTD+ + LW + G + Sbjct: 232 KKSQAAESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 Score = 33.5 bits (75), Expect = 0.56 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 6/111 (5%) Frame = +1 Query: 205 WDPHNHNAVATIT-DSSLHFWDLRSMKRSNAI---EHAHIRDVDYNPKKQNIIATAEDEF 372 W PH+ + + D +L WD +++ ++ E + + K ++A Sbjct: 107 WYPHDTGMFTSSSFDKTLKVWDTNTLQIADVFNFEETVYSHHMSPVATKHCLVAVGTRGP 166 Query: 373 GIRLWDLRM--LKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 ++L DL+ H L+ GH AV +P Y+ ++ +A DS LW Sbjct: 167 KVQLCDLKSGSCSHILQ---GHRQEILAVSWSPRYEYILATASADSRAKLW 214
>YC47_SCHPO (O14053) Hypothetical WD-repeat protein C1672.07 in chromosome III| Length = 902 Score = 33.5 bits (75), Expect = 0.56 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 6/110 (5%) Frame = +1 Query: 208 DPHNHNAVATITDSSLHFWDLR------SMKRSNAIEHAHIRDVDYNPKKQNIIATAEDE 369 D N V D L FWD S+ ++I HA + +++A A D+ Sbjct: 498 DNVNRILVTASLDGILKFWDFNKGNLIDSLDVGSSITHAIYQH------SSDLVAVACDD 551 Query: 370 FGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 FGIR+ D++ K +++L GHS+ + + + +++A D + W Sbjct: 552 FGIRIVDVQTRK-IVRELWGHSNRLTSFDFS-DTGRWLVTASLDGTIRTW 599
>2ABA_CANTR (P53031) Protein phosphatase PP2A regulatory subunit B (PR55) (Cell| division control protein 55) Length = 508 Score = 33.5 bits (75), Expect = 0.56 Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 22/138 (15%) Frame = +1 Query: 91 ISIDDRNIFLWNIDPSNKSAKVISQGSADM---LPNLRGGAWDPHNHNA-VATITDSSLH 258 +S DD I LWN+ +++S ++ A+M + + P N + + + ++ Sbjct: 184 LSADDLRINLWNLGIADQSFNIVDIKPANMEELTEVITSAEFHPLQCNLFMYSSSKGTIK 243 Query: 259 FWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIA------------------TAEDEFGIRL 384 D+RS S HA I + +P N + D +++ Sbjct: 244 LSDMRS--NSLCDSHAKIFEEYLDPSSHNFFTEITSSISDVKFSHDGRYIASRDYMTVKI 301 Query: 385 WDLRMLKHPLKDLPGHSH 438 WDL M P+K + H H Sbjct: 302 WDLAMENKPIKTIDVHEH 319
>GBLP_DROME (O18640) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C homolog) Length = 318 Score = 33.1 bits (74), Expect = 0.73 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 2/128 (1%) Frame = +1 Query: 28 DDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 D HTD + CV + P + ++S DR + +WN+ +N K G L + Sbjct: 146 DGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNL--ANCKLKNNHHGHNGYLNTV---T 200 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHAH-IRDVDYNPKKQNIIATAEDEFGIR 381 P + DS WDL K +EH I + ++P + + I+ Sbjct: 201 VSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPNRYWLCVAYGP--SIK 258 Query: 382 LWDLRMLK 405 +WDL K Sbjct: 259 IWDLACKK 266
>PRP19_RAT (Q9JMJ4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Neuronal| differentiation-related gene protein) Length = 504 Score = 33.1 bits (74), Expect = 0.73 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEH-AHIRDVDYNPKKQN--IIATAEDEFGIRLWDLRMLKH 408 DS + WDL+ +R+N H + +N +ATA D+ ++LWDLR LK+ Sbjct: 371 DSQIKIWDLK--ERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKN 426
>PRP19_MOUSE (Q99KP6) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Nuclear| matrix protein 200) (Nuclear matrix protein SNEV) Length = 504 Score = 33.1 bits (74), Expect = 0.73 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEH-AHIRDVDYNPKKQN--IIATAEDEFGIRLWDLRMLKH 408 DS + WDL+ +R+N H + +N +ATA D+ ++LWDLR LK+ Sbjct: 371 DSQIKIWDLK--ERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKN 426
>PRP19_HUMAN (Q9UMS4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Nuclear| matrix protein 200) (hPso4) Length = 504 Score = 33.1 bits (74), Expect = 0.73 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEH-AHIRDVDYNPKKQN--IIATAEDEFGIRLWDLRMLKH 408 DS + WDL+ +R+N H + +N +ATA D+ ++LWDLR LK+ Sbjct: 371 DSQIKIWDLK--ERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKN 426
>GBLP_BIOGL (Q93134) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C) (RACK) Length = 316 Score = 33.1 bits (74), Expect = 0.73 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +1 Query: 421 LPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L GH W + P+Y ++ILSA D ++ +W Sbjct: 11 LQGHGGWVTQIATTPQYPDMILSASRDKSLIVW 43
>WD51B_MOUSE (Q8BHD1) WD-repeat protein 51B| Length = 476 Score = 33.1 bits (74), Expect = 0.73 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 2/111 (1%) Frame = +1 Query: 190 LRGGAWDPHNHNAVATITDSSLHFWDLRSMKRSNAIEHA--HIRDVDYNPKKQNIIATAE 363 +R + P V+ D ++ WD + + N + VD+NP IA+A Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNG-TCIASAG 205 Query: 364 DEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNL 516 + +++WD+RM K L+ HS + +P + L+ +A +D V + Sbjct: 206 SDHAVKIWDIRMNK-LLQHYQVHSCGVNCLSFHPLGNSLV-TASSDGTVKM 254
>UTP15_YEAST (Q04305) U3 small nucleolar RNA-associated protein 15 (U3| snoRNA-associated protein 15) Length = 513 Score = 33.1 bits (74), Expect = 0.73 Identities = 16/65 (24%), Positives = 30/65 (46%) Frame = +1 Query: 325 YNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDS 504 ++ + I+ATA D+ RLWD+ P +L G + + + P L+ + D Sbjct: 132 FHTQDNKILATASDDRVTRLWDISNAYEPQLELTGATDYVRTLSFIPAAPHLVATGSYDG 191 Query: 505 AVNLW 519 + L+ Sbjct: 192 LIRLY 196
>PRP19_CHICK (Q5ZMA2) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog)| Length = 505 Score = 33.1 bits (74), Expect = 0.73 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEH-AHIRDVDYNPKKQN--IIATAEDEFGIRLWDLRMLKH 408 DS + WDL+ +R+N H + +N +ATA D+ ++LWDLR LK+ Sbjct: 372 DSQIKIWDLK--ERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKN 427
>STRAP_MOUSE (Q9Z1Z2) Serine-threonine kinase receptor-associated protein| (UNR-interacting protein) Length = 351 Score = 32.7 bits (73), Expect = 0.96 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Frame = +1 Query: 226 AVATITDSSLHFWDLRSMKRSNAIEHAHI-RDVDYNPKKQNIIATAEDEFGIRLWDLRML 402 A D + WD S + H HI + VD+ ++ +D+ +R++DL Sbjct: 74 AATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLLTGGQDKL-LRIYDLNKP 132 Query: 403 KHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 + K++ GH+ + D+ ILSA D V LW Sbjct: 133 EAEPKEISGHTSGIKKALWCSD-DKQILSA-DDKTVRLW 169
>GBB_ARATH (P49177) Guanine nucleotide-binding protein beta subunit| (transducin) (AGB1) Length = 377 Score = 32.7 bits (73), Expect = 0.96 Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 8/132 (6%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSA----KVISQGSADMLPNL 192 L H + C + P + S D+ LW++ K++ + S +AD+L Sbjct: 152 LTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVS 211 Query: 193 RGGAWDPHNHN-AVATITDSSLHFWDLRSMKRSNAIEHAHIRDVD---YNPKKQNIIATA 360 G+ N N ++ DS+ WD R+ R+ H H DV+ + P T Sbjct: 212 ISGS----NPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYR-FGTG 266 Query: 361 EDEFGIRLWDLR 396 D+ RL+D+R Sbjct: 267 SDDGTCRLYDIR 278
>CSTF1_HUMAN (Q05048) Cleavage stimulation factor, 50 kDa subunit (CSTF 50 kDa| subunit) (CF-1 50 kDa subunit) (CstF-50) Length = 431 Score = 32.7 bits (73), Expect = 0.96 Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 10/180 (5%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQ--GSADMLPNLRG 198 L DH D++ C+ + P +++++ R+ L D S SAK + A+ML ++ Sbjct: 169 LYDHVDEVTCLAFHPT---EQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSI-- 223 Query: 199 GAWDPHNHNAVATITDSSLHFWDLRSMKRSNAI----EHAH-IRDVDYNPKKQNIIATAE 363 ++ P + +L +D+ + + + +H I V+YN N+ T Sbjct: 224 -SFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYN-SSANMYVTGS 281 Query: 364 DEFGIRLWD---LRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVG 534 + I+LWD R + K G + N +Y ILS+G DS LW G Sbjct: 282 KDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKY---ILSSGKDSVAKLWEISTG 338
>WDR24_BRARE (Q7ZVL2) WD-repeat protein 24| Length = 779 Score = 32.7 bits (73), Expect = 0.96 Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 2/94 (2%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAI--EHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLK 417 D + +DLR + + + +RDV ++ K A + + ++LWD+R + Sbjct: 136 DGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFAASFENGNVQLWDIRRPDRYER 195 Query: 418 DLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 H+ + +PE + + G D V +W Sbjct: 196 MFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVW 229
>YR49_CAEEL (Q09392) Hypothetical WD-repeat protein F47D12.9| Length = 545 Score = 32.7 bits (73), Expect = 0.96 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Frame = +1 Query: 376 IRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDE---LILSAGTDSAVNLW 519 IR+WD R K+P+ ++ GHS+ R N +D+ + +AG+D V W Sbjct: 443 IRIWDFRWPKNPMMEMHGHSN--NCNRLNVFFDKEERFVFAAGSDGYVRGW 491
>ESC_DROME (Q24338) Polycomb protein esc (Protein extra sex combs)| Length = 425 Score = 32.7 bits (73), Expect = 0.96 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Frame = +1 Query: 289 NAIEHAH-IRDVDYNPKKQNIIATAEDEFGIRLWDLR--MLKHPLKDLPGHSHWTWAVRH 459 N I H I ++ ++P K ++ + + IRLW+++ + L + GH ++ Sbjct: 165 NYIGHGQAINELKFHPHKLQLLLSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDF 224 Query: 460 NPEYDELILSAGTDSAVNLW 519 N D I+S+G D ++ LW Sbjct: 225 NMRGDR-IVSSGMDHSLKLW 243
>GBLP_CHICK (P63247) Guanine nucleotide-binding protein beta subunit 2-like 1| (Guanine nucleotide-binding protein beta subunit-like protein 12.3) (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 317 Score = 32.7 bits (73), Expect = 0.96 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 421 LPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L GH+ W + P++ ++ILSA D + +W Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMW 43
>GBLP_RAT (P63245) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 32.7 bits (73), Expect = 0.96 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 421 LPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L GH+ W + P++ ++ILSA D + +W Sbjct: 10 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMW 42
>GBLP_PIG (P63246) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 32.7 bits (73), Expect = 0.96 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 421 LPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L GH+ W + P++ ++ILSA D + +W Sbjct: 10 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMW 42
>GBLP_MOUSE (P68040) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) (p205) (12-3) Length = 316 Score = 32.7 bits (73), Expect = 0.96 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 421 LPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L GH+ W + P++ ++ILSA D + +W Sbjct: 10 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMW 42
>GBLP_MACFA (Q4R7Y4) Guanine nucleotide-binding protein beta subunit 2-like 1| Length = 316 Score = 32.7 bits (73), Expect = 0.96 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 421 LPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L GH+ W + P++ ++ILSA D + +W Sbjct: 10 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMW 42
>GBLP_HUMAN (P63244) Guanine nucleotide-binding protein beta subunit 2-like 1| (Guanine nucleotide-binding protein beta subunit-like protein 12.3) (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 32.7 bits (73), Expect = 0.96 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 421 LPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L GH+ W + P++ ++ILSA D + +W Sbjct: 10 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMW 42
>GBLP_BOVIN (P63243) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C 1) (RACK1) (Receptor for activated C kinase) Length = 316 Score = 32.7 bits (73), Expect = 0.96 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 421 LPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 L GH+ W + P++ ++ILSA D + +W Sbjct: 10 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMW 42
>WTM2_YEAST (Q12206) Transcriptional modulator WTM2| Length = 467 Score = 32.7 bits (73), Expect = 0.96 Identities = 25/114 (21%), Positives = 51/114 (44%), Gaps = 4/114 (3%) Frame = +1 Query: 214 HNHNAVATITDSSLHFWDLRSMKRS----NAIEHAHIRDVDYNPKKQNIIATAEDEFGIR 381 +NH + D+ L FWD R+ + + ++ + D + +N+ T I+ Sbjct: 256 NNHLFASCSDDNILRFWDTRTADKPLWTLSEPKNGRLTSFDSSQVTENLFVTGFSTGVIK 315 Query: 382 LWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSDD 543 LWD R ++ DL + +++ E +L S G DS V++ ++ + + Sbjct: 316 LWDARAVQLATTDLTHRQNGEEPIQN--EIAKLFHSGG-DSVVDILFSQTSATE 366
>GBB2_TOBAC (P93398) Guanine nucleotide-binding protein beta subunit 2| Length = 377 Score = 32.3 bits (72), Expect = 1.3 Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 7/112 (6%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIEH--AHIRDVDYNPKKQNIIATAEDE--- 369 W P + V+ D L W+ + ++++AI+ A + ++P Q++ D Sbjct: 73 WTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGQSVACGGLDSVCS 132 Query: 370 -FGIRLWDLRMLKHPL-KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 F + + HP+ + L GH + + ++ P+ D ++++ D LW Sbjct: 133 IFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHVITSSGDQTCVLW 184 Score = 31.6 bits (70), Expect = 2.1 Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 14/185 (7%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGG 201 L HT K+ + W P + ++++S D + +WN S K+ + + M Sbjct: 61 LQGHTGKVYSLDWTP--EKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTC----- 113 Query: 202 AWDPHNHNAVATITDSSLHFWDLRS---------MKRSNAIEHAHIRDVDYNPKKQNIIA 354 A+ P + DS ++L S + R + ++ Y P + + Sbjct: 114 AFSPSGQSVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHVI 173 Query: 355 TAEDEFGIRLWD----LRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWL 522 T+ + LWD LR + GH+ +V + L +S DS LW Sbjct: 174 TSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSCDSTARLWD 233 Query: 523 AKVGS 537 +V S Sbjct: 234 TRVAS 238
>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi| Length = 700 Score = 32.3 bits (72), Expect = 1.3 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 8/84 (9%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVR--------HNP 465 + + + P+ Q ++A+ D+ +++W + DL HS + ++ +NP Sbjct: 537 VNAIKWCPQGQ-LLASCSDDMTLKIWSMNR-DRCCHDLQAHSKEIYTIKWSPTGPGTNNP 594 Query: 466 EYDELILSAGTDSAVNLWLAKVGS 537 + ++ SA DS V LW + GS Sbjct: 595 NTNLILASASFDSTVRLWDVERGS 618
>YK16_YEAST (P36130) Hypothetical 74.7 kDa Trp-Asp repeats-containing protein| in DAL80-GAP1 intergenic region Length = 659 Score = 32.3 bits (72), Expect = 1.3 Identities = 18/63 (28%), Positives = 36/63 (57%) Frame = +1 Query: 349 IATAEDEFGIRLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAK 528 +AT + +RLWDLR+ K P++ L GH+ +++ + E +++ D++V +W + Sbjct: 518 LATGTKDGIVRLWDLRVGK-PVRLLEGHTDGITSLKFD---SEKLVTGSMDNSVRIWDLR 573 Query: 529 VGS 537 S Sbjct: 574 TSS 576
>THOC6_HUMAN (Q86W42) THO complex subunit 6 homolog (WD-repeat protein 58)| Length = 341 Score = 32.3 bits (72), Expect = 1.3 Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 8/100 (8%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAIEHAHIRDVD--YNPKKQNIIATAEDEF------GIRLWDLRM 399 D ++ WDLR+ K IE + +N + +AT D + LW LR Sbjct: 189 DGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPALTLWHLRS 248 Query: 400 LKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 P P + +H Y +LILSAG VN W Sbjct: 249 -STPTTIFPIRA----PQKHVTFYQDLILSAGQGRCVNQW 283
>GBB_NICPL (P93339) Guanine nucleotide-binding protein beta subunit (NpGPB1)| Length = 377 Score = 32.0 bits (71), Expect = 1.6 Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 7/131 (5%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIEH--AHIRDVDYNPKKQNIIATAEDE--- 369 W P + V+ D L W+ + ++++AI+ A + ++P ++ D Sbjct: 73 WTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGHSVACGGLDSVCS 132 Query: 370 -FGIRLWDLRMLKHPL-KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLAKVGSDD 543 F + + HP+ + L GH + + ++ P+ D ++++ D LW G Sbjct: 133 IFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRT 192 Query: 544 SGPESPFWFTH 576 S F F H Sbjct: 193 SVFGGEFQFGH 203 Score = 32.0 bits (71), Expect = 1.6 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 14/185 (7%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGG 201 L HT K+ + W P + ++++S D + +WN S K+ + + M Sbjct: 61 LQGHTGKVYSLDWTP--EKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTC----- 113 Query: 202 AWDPHNHNAVATITDSSLHFWDLRS---------MKRSNAIEHAHIRDVDYNPKKQNIIA 354 A+ P H+ DS ++L S + R + ++ Y P + + Sbjct: 114 AFSPSGHSVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHLI 173 Query: 355 TAEDEFGIRLWD----LRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWL 522 T+ + LWD LR + GH+ +V + L +S D+ LW Sbjct: 174 TSSGDQTCVLWDITTGLRTSVFGGEFQFGHTADVQSVSISSSNPRLFVSGSCDTTARLWD 233 Query: 523 AKVGS 537 +V S Sbjct: 234 TRVAS 238
>GBB1_TOBAC (P93397) Guanine nucleotide-binding protein beta subunit 1| Length = 377 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 7/112 (6%) Frame = +1 Query: 205 WDPHNHNAVATITDSSLHFWDLRSMKRSNAIEH--AHIRDVDYNPKKQNIIATAEDE--- 369 W P + V+ D L W+ + ++++AI+ A + ++P Q++ D Sbjct: 73 WTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGQSVACGGLDSVCS 132 Query: 370 -FGIRLWDLRMLKHPL-KDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLW 519 F + + HP+ + L GH + + ++ P+ D ++++ D LW Sbjct: 133 IFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLW 184 Score = 30.0 bits (66), Expect = 6.2 Identities = 38/185 (20%), Positives = 69/185 (37%), Gaps = 14/185 (7%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISID-DRNIFLWNIDPSNKSAKVISQGSADMLPNLRGG 201 L HT K+ + W P + ++++S D + +WN S K+ + + M Sbjct: 61 LQGHTGKVYSLDWTP--EKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTC----- 113 Query: 202 AWDPHNHNAVATITDSSLHFWDLRS---------MKRSNAIEHAHIRDVDYNPKKQNIIA 354 A+ P + DS ++L S + R + ++ Y P + + Sbjct: 114 AFSPSGQSVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHLI 173 Query: 355 TAEDEFGIRLWD----LRMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWL 522 T+ + LWD LR + GH+ +V + L +S D+ LW Sbjct: 174 TSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSCDTTARLWD 233 Query: 523 AKVGS 537 +V S Sbjct: 234 TRVAS 238
>GBB_MAIZE (P49178) Guanine nucleotide-binding protein beta subunit| Length = 380 Score = 32.0 bits (71), Expect = 1.6 Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 13/184 (7%) Frame = +1 Query: 25 LDDHTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA 204 L H+ K+ + W P K+ + + D + +WN S K+ + P + A Sbjct: 62 LQGHSGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQKTHAIKLH-----CPWVMACA 115 Query: 205 WDPHNHNAVATITDSSLHFWDLRS---------MKRSNAIEHAHIRDVDYNPKKQNIIAT 357 + P+ + DS+ ++L S + R ++ Y P ++ + T Sbjct: 116 FAPNGQSVACGGLDSACSIFNLNSQADRDGNMPVSRILTGHKGYVSSCQYVPDQETRLIT 175 Query: 358 AEDEFGIRLWDL----RMLKHPLKDLPGHSHWTWAVRHNPEYDELILSAGTDSAVNLWLA 525 + + LWD+ R+ + GH+ +V N + +S D+ V LW Sbjct: 176 SSGDQTCVLWDVTTGQRISIFGGEFPSGHTADVQSVSINSSNTNMFVSGSCDTTVRLWDI 235 Query: 526 KVGS 537 ++ S Sbjct: 236 RIAS 239 Score = 31.6 bits (70), Expect = 2.1 Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 7/82 (8%) Frame = +1 Query: 244 DSSLHFWDLRSMKRSNAI-------EHAHIRDVDYNPKKQNIIATAEDEFGIRLWDLRML 402 D + WD+ + +R + A ++ V N N+ + + +RLWD+R+ Sbjct: 179 DQTCVLWDVTTGQRISIFGGEFPSGHTADVQSVSINSSNTNMFVSGSCDTTVRLWDIRIA 238 Query: 403 KHPLKDLPGHSHWTWAVRHNPE 468 ++ GH +V+ P+ Sbjct: 239 SRAVRTYHGHEDDVNSVKFFPD 260
>FIE1_MAIZE (Q8VZY7) Polycomb group protein FIE1 (FERTILIZATION-INDEPENDENT| ENDOSPERM 1) Length = 461 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDLR--MLKHPLKDLPGHSHWTWAVRHNPEYDELI 483 I ++ + K ++I +A + IRLW++ + GH H +V +P + Sbjct: 194 IHEIRTHASKPSLIISASKDESIRLWNVHTGICILVFAGAGGHRHDVLSVDFHPTEVGIF 253 Query: 484 LSAGTDSAVNLWLAK 528 S G D+ V +W K Sbjct: 254 ASCGMDNTVKIWSMK 268
>FIE2_MAIZE (Q8VZY6) Polycomb group protein FIE2 (FERTILIZATION-INDEPENDENT| ENDOSPERM 2) Length = 379 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Frame = +1 Query: 310 IRDVDYNPKKQNIIATAEDEFGIRLWDLR--MLKHPLKDLPGHSHWTWAVRHNPEYDELI 483 I ++ P K ++I +A + +RLW++ + GH + +V +P E Sbjct: 136 INEIRTQPLKPSLIISASKDESVRLWNVHTGICILIFAGAGGHRNEVLSVDFHPSDIERF 195 Query: 484 LSAGTDSAVNLWLAK 528 S G D+ V +W K Sbjct: 196 ASCGMDNTVKIWSMK 210
>TEP1_RAT (O08653) Telomerase protein component 1 (rTLP1)| (Telomerase-associated protein 1) (Telomerase protein 1) (p240) (p230) (p80 telomerase homolog) Length = 2629 Score = 31.6 bits (70), Expect = 2.1 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = +1 Query: 346 IIATAEDEFGIRLWDLRMLKHPLKDLPGHS-HWTWAVRHNPEYDELILSAGTDSAVNLWL 522 I+ATA + + WD+++ + PL S H W D +++S +D +V LW Sbjct: 2086 ILATAGRDRNLLCWDVKVAQAPLLIHTFSSCHRDWITGCTWTKDNILISCSSDGSVGLWN 2145 Query: 523 AKVG 534 + G Sbjct: 2146 PEAG 2149
>APAF_BRARE (Q9I9H8) Apoptotic protease-activating factor 1 (Apaf-1)| Length = 1261 Score = 31.6 bits (70), Expect = 2.1 Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 7/174 (4%) Frame = +1 Query: 34 HTDKIRCVLWWPLGKHDKLISIDDRNIFLWNIDPSNKSAKVISQGSADMLPNLRGGA-WD 210 H + CV + P G L S DD+ I LW D + S+ V + D+L + Sbjct: 883 HLSWVHCVQFSPDGSL-LLSSSDDQTIRLWETDRVHTSSAVALKRDTDVLSSHSDATIIA 941 Query: 211 PHNHNAVATITDSS----LHFWDLRSMKRSNAIEHAHIRDVDYNPKKQNIIATAEDEFGI 378 P + N + ++ S+ L +L S R + I + +A ++ + Sbjct: 942 PDSSNRLQVLSGSTGAVVLESEELSSRIRCSCIS-----------RNAAFVALGSEDGTV 990 Query: 379 RLWDLRMLKHPLKDLPGHSHWTWAVRHNPEYD--ELILSAGTDSAVNLWLAKVG 534 ++ ++ K +K L GH T V H D E+++++ DS + +W + G Sbjct: 991 QVIEVPSSKASVK-LSGH---TKTVHHCQFTDDCEILITSSEDSTIRVWKWRTG 1040 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,462,525 Number of Sequences: 219361 Number of extensions: 2273588 Number of successful extensions: 6893 Number of sequences better than 10.0: 302 Number of HSP's better than 10.0 without gapping: 6010 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6690 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
