ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3k09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X96979.1|HVLTP7A2B H.vulgare mRNA for lipid transfer protein... 624 e-176
2gb|AY226580.1| Triticum aestivum lipid transfer protein 3 (LTP3)... 492 e-136
3emb|AJ784900.2| Triticum aestivum mRNA for type 1 non-specific l... 472 e-130
4emb|AJ852541.1| Triticum aestivum ltp9.4a gene for type 1 non sp... 472 e-130
5emb|AJ852561.1| Triticum aestivum mRNA for type 1 non specific l... 389 e-105
6emb|AJ852548.1| Triticum aestivum ltp9.4b gene for type 1 non sp... 389 e-105
7emb|X68656.1|HVCW19 H.vulgare Cw-19 mRNA 117 2e-23
8gb|AF439446.1|AF439446 Setaria italica lipid transfer protein mR... 68 2e-08
9ref|NM_001009072.1| Pan troglodytes sodium channel, nonvoltage-g... 44 0.28
10dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 44 0.28
11gb|AF038165.1|AF038165 Pan troglodytes epithelial sodium channel... 44 0.28
12ref|XM_502111.1| Yarrowia lipolytica CLIB122, YALI0C21890g predi... 42 1.1
13gb|AY152826.1| Felis catus clone BAC 102h1 major histocompatibli... 42 1.1
14gb|AE012018.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 1.1
15gb|AF114829.1| Oryza sativa lipid transfer protein gene, complet... 42 1.1
16emb|X73563.1|SBLPBL1A Streptomyces bambergiensis plasmid genes T... 42 1.1
17gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 1.1
18emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 42 1.1
19gb|U29176.1|OSU29176 Oryza sativa lipid transfer protein precurs... 42 1.1
20ref|XM_475667.1| Oryza sativa (japonica cultivar-group), predic... 40 4.3
21ref|XM_465784.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.3
22gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
23gb|BC013566.1| Homo sapiens aquaporin 3 (Gill blood group), mRNA... 40 4.3
24emb|AL356218.22| Human DNA sequence from clone RP11-311H10 on ch... 40 4.3
25emb|X54488.1|CRCAH2 Chlamydomonas reinhardtii CAH2 gene for carb... 40 4.3
26gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare str... 40 4.3
27dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 4.3
28emb|CR624600.1| full-length cDNA clone CS0DM001YP02 of Fetal liv... 40 4.3
29dbj|AK095363.1| Homo sapiens cDNA FLJ38044 fis, clone CTONG20141... 40 4.3
30emb|CR604170.1| full-length cDNA clone CS0CAP003YG18 of Thymus o... 40 4.3
31emb|CR599108.1| full-length cDNA clone CS0DI014YP03 of Placenta ... 40 4.3
32emb|CR599072.1| full-length cDNA clone CS0DK011YG17 of HeLa cell... 40 4.3
33emb|CR592288.1| full-length cDNA clone CS0DM009YA04 of Fetal liv... 40 4.3
34ref|NM_004925.3| Homo sapiens aquaporin 3 (Gill blood group) (AQ... 40 4.3
35dbj|AB001325.1| Homo sapiens AQP3 mRNA for aquaporine 3, partail... 40 4.3
36gb|DQ083949.1| Homo sapiens aquaporin 3 (AQP3) gene, complete cds 40 4.3
37gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sa... 40 4.3
38dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
40gb|AY220530.1| Chlamydomonas reinhardtii LGII molecular marker G... 40 4.3
41dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.3
42dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 4.3
43dbj|AK106758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.3
44gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 4.3
45dbj|D50486.1|HUMA3 Homo sapiens AQP3 gene for aquaporin 3, parti... 40 4.3
46gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
47emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chro... 40 4.3 
>emb|X96979.1|HVLTP7A2B H.vulgare mRNA for lipid transfer protein 7a2b
          Length = 755

 Score =  624 bits (315), Expect = e-176
 Identities = 324/326 (99%), Gaps = 1/326 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   catctgatnacctgctagcc-gatagcttaaccgatggctcgtctcaacagcaaggctgt 60
           |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 62  catctgatcacctgctagccagatagcttaaccgatggctcgtctcaacagcaaggctgt 121

                                                                       
Query: 61  ggcggccgccgttgtcctggcggcggtggtgctgatgatggccggcagggaggcctcggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggcggccgccgttgtcctggcggcggtggtgctgatgatggccggcagggaggcctcggc 181

                                                                       
Query: 121 ggcgctgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtggcgtacgtcacggg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggcgctgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtggcgtacgtcacggg 241

                                                                       
Query: 181 gagggcttctgcgatcagcaaggagtgctgctccggcgtgcaggggctgaacggcctggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gagggcttctgcgatcagcaaggagtgctgctccggcgtgcaggggctgaacggcctggc 301

                                                                       
Query: 241 ccgcagcagcccggaccggcagacggcgtgcaggtgcctcaagagcctcgctaccagcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ccgcagcagcccggaccggcagacggcgtgcaggtgcctcaagagcctcgctaccagcat 361

                                     
Query: 301 caaggccatcaacatgggcaaggtct 326
           ||||||||||||||||||||||||||
Sbjct: 362 caaggccatcaacatgggcaaggtct 387
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>gb|AY226580.1| Triticum aestivum lipid transfer protein 3 (LTP3) mRNA, complete
           cds
          Length = 555

 Score =  492 bits (248), Expect = e-136
 Identities = 281/292 (96%)
 Strand = Plus / Plus

                                                                       
Query: 35  atggctcgtctcaacagcaaggctgtggcggccgccgttgtcctggcggcggtggtgctg 94
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 77  atggctcgtctcaacagcaaggctgtggcggccgccgtggtcctggcggcggtggtgctg 136

                                                                       
Query: 95  atgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagctc 154
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagctc 196

                                                                       
Query: 155 gcgccgtgcgtggcgtacgtcacggggagggcttctgcgatcagcaaggagtgctgctcc 214
           |||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||||
Sbjct: 197 gcgccgtgcgtggcgtacgtgacggggagggcgtcctcgatcagcaaggagtgctgctcc 256

                                                                       
Query: 215 ggcgtgcaggggctgaacggcctggcccgcagcagcccggaccggcagacggcgtgcagg 274
           ||||||||||||||||||||||||||||||||||||||||||||  |||  |||||||||
Sbjct: 257 ggcgtgcaggggctgaacggcctggcccgcagcagcccggaccgcaagatagcgtgcagg 316

                                                               
Query: 275 tgcctcaagagcctcgctaccagcatcaaggccatcaacatgggcaaggtct 326
           ||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 317 tgcctcaagagcctcgccaccagcatcaagtccatcaacatgggcaaggtct 368
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>emb|AJ784900.2| Triticum aestivum mRNA for type 1 non-specific lipid transfer
           protein precursor (ltp9.4 gene)
          Length = 771

 Score =  472 bits (238), Expect = e-130
 Identities = 280/294 (95%)
 Strand = Plus / Plus

                                                                       
Query: 33  cgatggctcgtctcaacagcaaggctgtggcggccgccgttgtcctggcggcggtggtgc 92
           |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 74  cgatggctcgtctcaacagcaaggctgtggtggccgccgtggtcctggcggcggtggtgc 133

                                                                       
Query: 93  tgatgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagc 152
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tgatgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagc 193

                                                                       
Query: 153 tcgcgccgtgcgtggcgtacgtcacggggagggcttctgcgatcagcaaggagtgctgct 212
           |||||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||
Sbjct: 194 tcgcgccgtgcgtggcgtacgtaacggggagggcgtcctcgatcagcaaggagtgctgct 253

                                                                       
Query: 213 ccggcgtgcaggggctgaacggcctggcccgcagcagcccggaccggcagacggcgtgca 272
           ||||||||||||||||||||||| |||||||||||||| |||||||  |||  |||||||
Sbjct: 254 ccggcgtgcaggggctgaacggcatggcccgcagcagctcggaccgcaagatagcgtgca 313

                                                                 
Query: 273 ggtgcctcaagagcctcgctaccagcatcaaggccatcaacatgggcaaggtct 326
           ||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 314 ggtgcctcaagagcctcgccaccagcatcaagtccatcaacatgggcaaggtct 367
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>emb|AJ852541.1| Triticum aestivum ltp9.4a gene for type 1 non specific lipid transfer
            protein precursor, exons 1-2
          Length = 1965

 Score =  472 bits (238), Expect = e-130
 Identities = 280/294 (95%)
 Strand = Plus / Plus

                                                                        
Query: 33   cgatggctcgtctcaacagcaaggctgtggcggccgccgttgtcctggcggcggtggtgc 92
            |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 842  cgatggctcgtctcaacagcaaggctgtggtggccgccgtggtcctggcggcggtggtgc 901

                                                                        
Query: 93   tgatgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagc 152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902  tgatgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagc 961

                                                                        
Query: 153  tcgcgccgtgcgtggcgtacgtcacggggagggcttctgcgatcagcaaggagtgctgct 212
            |||||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||
Sbjct: 962  tcgcgccgtgcgtggcgtacgtgacggggagggcgtcctcgatcagcaaggagtgctgct 1021

                                                                        
Query: 213  ccggcgtgcaggggctgaacggcctggcccgcagcagcccggaccggcagacggcgtgca 272
            ||||||||||||||||||||||| |||||||||||||| |||||||  |||  |||||||
Sbjct: 1022 ccggcgtgcaggggctgaacggcatggcccgcagcagctcggaccgcaagatagcgtgca 1081

                                                                  
Query: 273  ggtgcctcaagagcctcgctaccagcatcaaggccatcaacatgggcaaggtct 326
            ||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 1082 ggtgcctcaagagcctcgccaccagcatcaagtccatcaacatgggcaaggtct 1135
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>emb|AJ852561.1| Triticum aestivum mRNA for type 1 non specific lipid transfer
           protein precursor (ltp9.4b gene)
          Length = 776

 Score =  389 bits (196), Expect = e-105
 Identities = 270/294 (91%), Gaps = 3/294 (1%)
 Strand = Plus / Plus

                                                                       
Query: 33  cgatggctcgtctcaacagcaaggctgtggcggccgccgttgtcctggcggcggtggtgc 92
           |||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||
Sbjct: 70  cgatggctcgtctcaacagcaaggctgtggtgtccgccgtggtcctggcggcggtggtgc 129

                                                                       
Query: 93  tgatgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagc 152
           | ||||||||||||||||||||   | |||| ||||||||||||||||||||||||||||
Sbjct: 130 taatgatggccggcagggaggc---gacggcactgtcgtgcgggcaggtggactccaagc 186

                                                                       
Query: 153 tcgcgccgtgcgtggcgtacgtcacggggagggcttctgcgatcagcaaggagtgctgct 212
           |||||||||||||| ||||||| ||||||| |||  |  |||||||||||||||||||||
Sbjct: 187 tcgcgccgtgcgtgtcgtacgtgacggggaaggcgccctcgatcagcaaggagtgctgct 246

                                                                       
Query: 213 ccggcgtgcaggggctgaacggcctggcccgcagcagcccggaccggcagacggcgtgca 272
           |||| |||||||||||||||||||||||||||||||||||||||||  |||  |||||||
Sbjct: 247 ccggtgtgcaggggctgaacggcctggcccgcagcagcccggaccgcaagatagcgtgca 306

                                                                 
Query: 273 ggtgcctcaagagcctcgctaccagcatcaaggccatcaacatgggcaaggtct 326
           ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||
Sbjct: 307 ggtgcctcaagagcctcgccaccagcatcaagtccatcaacatggacaaggtct 360
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>emb|AJ852548.1| Triticum aestivum ltp9.4b gene for type 1 non specific lipid transfer
            protein precursor, exons 1-2
          Length = 2000

 Score =  389 bits (196), Expect = e-105
 Identities = 270/294 (91%), Gaps = 3/294 (1%)
 Strand = Plus / Plus

                                                                        
Query: 33   cgatggctcgtctcaacagcaaggctgtggcggccgccgttgtcctggcggcggtggtgc 92
            |||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||
Sbjct: 1006 cgatggctcgtctcaacagcaaggctgtggtgtccgccgtggtcctggcggcggtggtgc 1065

                                                                        
Query: 93   tgatgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagc 152
            | ||||||||||||||||||||   | |||| ||||||||||||||||||||||||||||
Sbjct: 1066 taatgatggccggcagggaggc---gacggcactgtcgtgcgggcaggtggactccaagc 1122

                                                                        
Query: 153  tcgcgccgtgcgtggcgtacgtcacggggagggcttctgcgatcagcaaggagtgctgct 212
            |||||||||||||| ||||||| ||||||| |||  |  |||||||||||||||||||||
Sbjct: 1123 tcgcgccgtgcgtgtcgtacgtgacggggaaggcgccctcgatcagcaaggagtgctgct 1182

                                                                        
Query: 213  ccggcgtgcaggggctgaacggcctggcccgcagcagcccggaccggcagacggcgtgca 272
            |||| |||||||||||||||||||||||||||||||||||||||||  |||  |||||||
Sbjct: 1183 ccggtgtgcaggggctgaacggcctggcccgcagcagcccggaccgcaagatagcgtgca 1242

                                                                  
Query: 273  ggtgcctcaagagcctcgctaccagcatcaaggccatcaacatgggcaaggtct 326
            ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||
Sbjct: 1243 ggtgcctcaagagcctcgccaccagcatcaagtccatcaacatggacaaggtct 1296
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>emb|X68656.1|HVCW19 H.vulgare Cw-19 mRNA
          Length = 660

 Score =  117 bits (59), Expect = 2e-23
 Identities = 62/63 (98%)
 Strand = Plus / Plus

                                                                       
Query: 264 cggcgtgcaggtgcctcaagagcctcgctaccagcatcaaggccatcaacatgggcaagg 323
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 263 cggcgtgcaggtgcctcaagagcctcgctaccagcatcaagggcatcaacatgggcaagg 322

              
Query: 324 tct 326
           |||
Sbjct: 323 tct 325
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>gb|AF439446.1|AF439446 Setaria italica lipid transfer protein mRNA, complete cds
          Length = 851

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 242 cgcagcagcccggaccggcagacggcgtgcaggtgcctcaagagcctcgc 291
           |||| |||| ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 271 cgcaccagcgcggaccggcaggcggcgtgccggtgcctcaagagcctcgc 320
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>ref|NM_001009072.1| Pan troglodytes sodium channel, nonvoltage-gated 1, delta (SCNN1D),
           mRNA
          Length = 1917

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 78  tggcggcggtggtgctgatgatggcc 103
           |||||||||||||||||||| |||||
Sbjct: 120 tggcggcggtggtgctgatggtggcc 95
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 82     ggcggtggtgctgatgatggccggca 107
              |||||||||||||||| |||||||||
Sbjct: 803414 ggcggtggtgctgatggtggccggca 803389
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>gb|AF038165.1|AF038165 Pan troglodytes epithelial sodium channel delta subunit mRNA,
           complete cds
          Length = 1917

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 78  tggcggcggtggtgctgatgatggcc 103
           |||||||||||||||||||| |||||
Sbjct: 120 tggcggcggtggtgctgatggtggcc 95
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>ref|XM_502111.1| Yarrowia lipolytica CLIB122, YALI0C21890g predicted mRNA
          Length = 1203

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 230 aacggcctggcccgcagcagc 250
           |||||||||||||||||||||
Sbjct: 342 aacggcctggcccgcagcagc 322
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>gb|AY152826.1| Felis catus clone BAC 102h1 major histocompatiblity complex extended
             and classical class II region, partial sequence
          Length = 132445

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 85    ggtggtgctgatgatggccggcagg 109
             ||||||||||||||| |||||||||
Sbjct: 91051 ggtggtgctgatgatagccggcagg 91075
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>gb|AE012018.1| Xanthomonas axonopodis pv. citri str. 306,  section 396 of 469 of the
            complete genome
          Length = 10329

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 232  cggcctggcccgcagcagcccggac 256
            |||||||||| ||||||||||||||
Sbjct: 7715 cggcctggccggcagcagcccggac 7691
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>gb|AF114829.1| Oryza sativa lipid transfer protein gene, complete cds
          Length = 1802

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 153 tcgcgccgtgcgtggcgtacgtcacggggaggg 185
           ||||||||||| || ||||||||| ||||||||
Sbjct: 676 tcgcgccgtgcctgtcgtacgtcatggggaggg 708
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>emb|X73563.1|SBLPBL1A Streptomyces bambergiensis plasmid genes TRA1 - TRA5 and ORF4 and
           ORF7
          Length = 5746

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 77  ctggcggcggtggtgctgatg 97
           |||||||||||||||||||||
Sbjct: 418 ctggcggcggtggtgctgatg 438
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 76      cctggcggcggtggtgctgat 96
               |||||||||||||||||||||
Sbjct: 3082673 cctggcggcggtggtgctgat 3082653
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 230     aacggcctggcccgcagcagc 250
               |||||||||||||||||||||
Sbjct: 2930108 aacggcctggcccgcagcagc 2930088
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>gb|U29176.1|OSU29176 Oryza sativa lipid transfer protein precursor, mRNA, partial cds
          Length = 466

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 153 tcgcgccgtgcgtggcgtacgtcacggggaggg 185
           ||||||||||| || ||||||||| ||||||||
Sbjct: 52  tcgcgccgtgcctgtcgtacgtcatggggaggg 84
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>ref|XM_475667.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 67  cgccgttgtcctggcggcggtggtgctg 94
           |||||| |||||||||||| ||||||||
Sbjct: 84  cgccgtcgtcctggcggcgctggtgctg 111
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>ref|XM_465784.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 492

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 ggccatcaacatgggcaagg 323
           ||||||||||||||||||||
Sbjct: 432 ggccatcaacatgggcaagg 451
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>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 67    cgccgttgtcctggcggcggtggtgctg 94
             |||||| |||||||||||| ||||||||
Sbjct: 35657 cgccgtcgtcctggcggcgctggtgctg 35684
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>gb|BC013566.1| Homo sapiens aquaporin 3 (Gill blood group), mRNA (cDNA clone
           MGC:8708 IMAGE:3877096), complete cds
          Length = 1810

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 cggcggcgctgtcgtgcgggcagg 140
           |||||||||||||| |||||||||
Sbjct: 26  cggcggcgctgtcgggcgggcagg 3
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>emb|AL356218.22| Human DNA sequence from clone RP11-311H10 on chromosome 9 Contains the
             3' end of the NFX1 gene for X-box binding nuclear
             transcription factor 1,  the AQP7 and AQP3 genes for
             aquaporin 7 and 3, a novel gene, the gene for nucleolar
             RNA-associated protein alpha, beta and gamma and a CpG
             island, complete sequence
          Length = 142839

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   cggcggcgctgtcgtgcgggcagg 140
             |||||||||||||| |||||||||
Sbjct: 93195 cggcggcgctgtcgggcgggcagg 93218
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>emb|X54488.1|CRCAH2 Chlamydomonas reinhardtii CAH2 gene for carbonic dehydratase
          Length = 4858

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 79   ggcggcggtggtgctgatgatggccggc 106
            ||||| ||||||| ||||||||||||||
Sbjct: 3462 ggcggtggtggtggtgatgatggccggc 3435
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>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0068A07, from Chromosome 10, complete sequence
          Length = 154505

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     tgctgatgatggccggcagg 109
              ||||||||||||||||||||
Sbjct: 103196 tgctgatgatggccggcagg 103177
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 59      gtggcggccgccgttgtcctggcggcgg 86
               ||||||||||| || |||||||||||||
Sbjct: 4572977 gtggcggccgcagtggtcctggcggcgg 4572950
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>emb|CR624600.1| full-length cDNA clone CS0DM001YP02 of Fetal liver of Homo sapiens
           (human)
          Length = 1780

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 cggcggcgctgtcgtgcgggcagg 140
           |||||||||||||| |||||||||
Sbjct: 39  cggcggcgctgtcgggcgggcagg 16
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>dbj|AK095363.1| Homo sapiens cDNA FLJ38044 fis, clone CTONG2014119, moderately
           similar to AQUAPORIN 3
          Length = 2911

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 cggcggcgctgtcgtgcgggcagg 140
           |||||||||||||| |||||||||
Sbjct: 55  cggcggcgctgtcgggcgggcagg 32
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>emb|CR604170.1| full-length cDNA clone CS0CAP003YG18 of Thymus of Homo sapiens
           (human)
          Length = 1786

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 cggcggcgctgtcgtgcgggcagg 140
           |||||||||||||| |||||||||
Sbjct: 34  cggcggcgctgtcgggcgggcagg 11
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>emb|CR599108.1| full-length cDNA clone CS0DI014YP03 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1797

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 cggcggcgctgtcgtgcgggcagg 140
           |||||||||||||| |||||||||
Sbjct: 63  cggcggcgctgtcgggcgggcagg 40
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>emb|CR599072.1| full-length cDNA clone CS0DK011YG17 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1790

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 cggcggcgctgtcgtgcgggcagg 140
           |||||||||||||| |||||||||
Sbjct: 31  cggcggcgctgtcgggcgggcagg 8
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>emb|CR592288.1| full-length cDNA clone CS0DM009YA04 of Fetal liver of Homo sapiens
           (human)
          Length = 1793

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 cggcggcgctgtcgtgcgggcagg 140
           |||||||||||||| |||||||||
Sbjct: 36  cggcggcgctgtcgggcgggcagg 13
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>ref|NM_004925.3| Homo sapiens aquaporin 3 (Gill blood group) (AQP3), mRNA
          Length = 1835

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 cggcggcgctgtcgtgcgggcagg 140
           |||||||||||||| |||||||||
Sbjct: 51  cggcggcgctgtcgggcgggcagg 28
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>dbj|AB001325.1| Homo sapiens AQP3 mRNA for aquaporine 3, partail cds
          Length = 1442

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 cggcggcgctgtcgtgcgggcagg 140
           |||||||||||||| |||||||||
Sbjct: 49  cggcggcgctgtcgggcgggcagg 26
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>gb|DQ083949.1| Homo sapiens aquaporin 3 (AQP3) gene, complete cds
          Length = 13709

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 117  cggcggcgctgtcgtgcgggcagg 140
            |||||||||||||| |||||||||
Sbjct: 2862 cggcggcgctgtcgggcgggcagg 2839
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>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
             sequence; splicing factor SF2-like protein (SF2) and
             universal stress protein (USP1) genes and Hv
             receptor-kinase-like pseudogene, complete cds; and
             retrotransposons Sandra6 and Sandra7, complete sequence
          Length = 82293

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    ggcggccgccgttgtcctgg 80
             ||||||||||||||||||||
Sbjct: 37933 ggcggccgccgttgtcctgg 37952
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 90       tgctgatgatggccggcagg 109
                ||||||||||||||||||||
Sbjct: 12583109 tgctgatgatggccggcagg 12583090
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 67       cgccgttgtcctggcggcggtggtgctg 94
                |||||| |||||||||||| ||||||||
Sbjct: 24966804 cgccgtcgtcctggcggcgctggtgctg 24966831
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>gb|AY220530.1| Chlamydomonas reinhardtii LGII molecular marker GP366 sequence
          Length = 610

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 cggcctggcccgcagcagcc 251
           ||||||||||||||||||||
Sbjct: 52  cggcctggcccgcagcagcc 71
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 108     gggaggcctcggcggcgctg 127
               ||||||||||||||||||||
Sbjct: 6984484 gggaggcctcggcggcgctg 6984503
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 74      gtcctggcggcggtggtgctgatg 97
               |||||||||||||||| |||||||
Sbjct: 3618757 gtcctggcggcggtggcgctgatg 3618734
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>dbj|AK106758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D09, full
            insert sequence
          Length = 3740

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 67   cgccgttgtcctggcggcggtggtgctg 94
            |||||| |||||||||||| ||||||||
Sbjct: 1564 cgccgtcgtcctggcggcgctggtgctg 1591
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 59      gtggcggccgccgttgtcctggcggcgg 86
               ||||||||||| || |||||||||||||
Sbjct: 4577737 gtggcggccgcagtggtcctggcggcgg 4577710
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>dbj|D50486.1|HUMA3 Homo sapiens AQP3 gene for aquaporin 3, partial cds and 5' flanking
           region
          Length = 333

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 cggcggcgctgtcgtgcgggcagg 140
           |||||||||||||| |||||||||
Sbjct: 312 cggcggcgctgtcgggcgggcagg 289
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 90       tgctgatgatggccggcagg 109
                ||||||||||||||||||||
Sbjct: 12590449 tgctgatgatggccggcagg 12590430
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>emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chromosome 4, complete
             sequence
          Length = 202412

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 78    tggcggcggtggtgctgatgatgg 101
             |||||||||||||| |||||||||
Sbjct: 72003 tggcggcggtggtggtgatgatgg 71980


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,993,960
Number of Sequences: 3902068
Number of extensions: 1993960
Number of successful extensions: 43265
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42599
Number of HSP's gapped (non-prelim): 663
length of query: 326
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 304
effective length of database: 17,147,199,772
effective search space: 5212748730688
effective search space used: 5212748730688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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