ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| baak4i20 | 286 | AV910439 | not_full | emb|AL121585.22|HSBA504H3 Human DNA sequence from clone RP11-504H3 on chromosome 20 Contains gene SNX5 for sorting nexin 5, the C20orf72 gene, the PTMAP3 gene for PTMA (prothymosin, alpha) pseudogene 3, the 3NULL end of the ZNF339 gene for zinc finger protei | 16 | not_full | VITA2_XENLA (P18709) Vitellogenin A2 precursor (VTG A2) [Contains: Lipovitellin I; Lipovitellin II; Phosvitin] Length = 1807 | 4 | -- | --- | - | -- | --- | - |
| baak4i19 | 294 | AV910438 | not_full | ref|XM_472416.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 429 | 56 | not_full | S6A17_RAT (P31662) Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (Solute carrier family 6 member 17) Length = 727 | 21 | -- | --- | - | -- | --- | - |
| baak4i18 | 515 | AV910437 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 33 | not_full | CAC1B_RAT (Q02294) Voltage-dependent N-type calcium channel alpha-1B subunit (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2336 | 26 | -- | --- | - | -- | --- | - |
| baak4i17 | 518 | AV910436 | not_full | gb|BT016772.1| Zea mays clone Contig605 mRNA sequence Length = 1938 | 128 | not_full | HSP7S_PEA (Q02028) Stromal 70 kDa heat shock-related protein, chloroplast precursor Length = 706 | 500 | -- | --- | - | -- | --- | - |
| baak4i16 | 484 | AV910435 | not_full | dbj|AK060099.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H01, full insert sequence Length = 957 | 139 | not_full | Y5161_ARATH (Q9M015) Protein At5g01610 Length = 170 | 18 | -- | --- | - | -- | --- | - |
| baak4i15 | 612 | AV910434 | not_full | emb|X74545.1|TAATP2 T.aestivum atp-2 mRNA for ATP synthase beta subunit Length = 1891 | 500 | not_full | ATPBM_MAIZE (P19023) ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14) Length = 553 | 500 | -- | --- | - | -- | --- | - |
| baak4i14 | 523 | AV910433 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4i13 | 508 | AV910432 | not_full | emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24, complete sequence Length = 127506 | 76 | not_full | SHH_CHICK (Q91035) Sonic hedgehog protein precursor (SHH) [Contains: Sonic hedgehog protein N-product; Sonic hedgehog protein C-product] Length = 425 | 2 | -- | --- | - | -- | --- | - |
| baak4i12 | 537 | AV910431 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 392 | full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 169 | -- | --- | - | -- | --- | - |
| baak4i11 | 549 | AV910430 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 182 | not_full | CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) Length = 421 | 500 | -- | --- | - | -- | --- | - |
| baak4i10 | 550 | AV910429 | not_full | gb|AY107628.1| Zea mays PCO087035 mRNA sequence Length = 754 | 163 | not_full | TT12_ARATH (Q9LYT3) TRANSPARENT TESTA 12 protein Length = 507 | 94 | -- | --- | - | -- | --- | - |
| baak4i09 | 569 | AV910428 | not_full | dbj|AK104849.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A01, full insert sequence Length = 1063 | 25 | not_full | TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4 (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 | 65 | -- | --- | - | -- | --- | - |
| baak4i08 | 311 | AV832518 | not_full | ref|XM_481404.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1410 | 23 | not_full | KR132_HUMAN (Q52LG2) Keratin-associated protein 13-2 Length = 175 | 10 | -- | --- | - | -- | --- | - |
| baak4i07 | 518 | AV910427 | not_full | emb|AJ534445.1|HVU534445 Hordeum vulgare mRNA for hexose transporter (stp1 gene) Length = 2614 | 79 | not_full | YFIG_BACSU (P54723) Hypothetical metabolite transport protein yfiG Length = 482 | 112 | -- | --- | - | -- | --- | - |
| baak4i06 | 502 | AV910426 | not_full | gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 | 395 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 161 | -- | --- | - | -- | --- | - |
| baak4i05 | 298 | AV910425 | not_full | gb|M98254.1|BLYPSAD Barley PSI-D subunit of photosystem I (PsaD) mRNA, complete cds Length = 810 | 27 | not_full | PSAD_HORVU (P36213) Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D) Length = 205 | 29 | -- | --- | - | -- | --- | - |
| baak4i04 | 540 | AV910424 | not_full | emb|AJ582621.1|OSA582621 Oryza sativa (japonica cultivar-group) mRNA for NADPH thioredoxin reductase (NtrC gene) Length = 1684 | 51 | not_full | TRXB_NEUCR (P51978) Thioredoxin reductase (EC 1.8.1.9) Length = 334 | 157 | -- | --- | - | -- | --- | - |
| baak4i03 | 588 | AV910423 | not_full | ref|XM_467365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 | 128 | not_full | IPYR_ORYSA (O22537) Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 214 | 128 | -- | --- | - | -- | --- | - |
| baak4i02 | 460 | AV910422 | not_full | dbj|AK105083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F02, full insert sequence Length = 441 | 267 | not_full | OR4K3_HUMAN (Q96R72) Olfactory receptor 4K3 Length = 315 | 12 | -- | --- | - | -- | --- | - |
| baak4i01 | 296 | AV910421 | not_full | gb|AY090544.1| Deschampsia antarctica clone Dacor 0.63. one helix protein mRNA, complete cds Length = 634 | 18 | not_full | YCF17_PORPU (P51355) Hypothetical 5.5 kDa protein ycf17 (ORF48) Length = 48 | 22 | -- | --- | - | -- | --- | - |
| baak4h24 | 602 | AV910420 | not_full | gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 | 36 | not_full | GATA9_ARATH (Q9SD38) GATA transcription factor 9 (AtGATA-9) Length = 312 | 14 | -- | --- | - | -- | --- | - |
| baak4h23 | 186 | AV910419 | not_full | gb|CP000013.1| Borrelia garinii PBi, complete genome Length = 904246 | 19 | not_full | ARR10_ARATH (O49397) Two-component response regulator ARR10 (Receiver-like protein 4) Length = 552 | 1 | -- | --- | - | -- | --- | - |
| baak4h22 | 591 | AV910418 | not_full | ref|XM_472744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 | 500 | not_full | G3PA_MAIZE (P09315) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) Length = 403 | 261 | -- | --- | - | -- | --- | - |
| baak4h21 | 337 | AV910417 | not_full | gb|L13437.2|WHTWSC19AA Triticum aestivum cold acclimation protein WCS19 mRNA, complete cds Length = 657 | 98 | not_full | UB72_DEIRA (Q9RV58) Protein DR1172 Length = 298 | 36 | -- | --- | - | -- | --- | - |
| baak4h20 | 498 | AV910416 | not_full | ref|XM_464920.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2793 | 57 | not_full | MFP_ORYSA (Q8W1L6) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase L | 75 | -- | --- | - | -- | --- | - |
| baak4h19 | 252 | AV910415 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_ORYSA (P12089) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4h18 | 334 | AV910414 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4h17 | 681 | AV910413 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4h16 | 368 | AV910412 | not_full | ref|NM_192267.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1191 | 7 | not_full | Y3806_PSEAE (Q51385) Hypothetical UPF0063 protein PA3806 Length = 379 | 19 | -- | --- | - | -- | --- | - |
| baak4h15 | 497 | AV910411 | full | gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds; nuclear gene for chloroplast product Length = 481 | 370 | not_full | PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 140 | 21 | -- | --- | - | -- | --- | - |
| baak4h13 | 443 | AV910410 | not_full | emb|X84738.1|HVNADPHPO H.vulgare mRNA for NADPH-protochlorophyllide oxidoreductase Length = 1345 | 90 | not_full | PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 395 | 30 | -- | --- | - | -- | --- | - |
| baak4h12 | 570 | AV910409 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| baak4h11 | 663 | AV910408 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4h10 | 45 | AV832517 | not_full | gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 | 500 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| baak4h09 | 634 | AV910407 | not_full | emb|Z34917.1|HVUNKNOWN Hordeum vulgare mRNA for bas1 protein Length = 860 | 88 | not_full | BAS1_HORVU (Q96468) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) Length = 210 | 107 | -- | --- | - | -- | --- | - |
| baak4h08 | 524 | AV910406 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 390 | full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 169 | -- | --- | - | -- | --- | - |
| baak4h07 | 462 | AV910405 | not_full | gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 | 378 | full | CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) Length = 266 | 162 | -- | --- | - | -- | --- | - |
| baak4h06 | 368 | AV910404 | not_full | ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 | 236 | not_full | CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor (LHCI type III CAB-8) Length = 273 | 77 | -- | --- | - | -- | --- | - |
| baak4h05 | 590 | AV910403 | not_full | emb|X15233.1|TAPGKCHL Wheat mRNA for chloroplast phosphoglycerate kinase (EC 2.7.2.3) Length = 1605 | 258 | not_full | PGKH_WHEAT (P12782) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) Length = 480 | 275 | -- | --- | - | -- | --- | - |
| baak4h04 | 308 | AV910402 | not_full | emb|AL136164.8| Human DNA sequence from clone RP3-331H24 on chromosome 6 Contains the 5NULL end of a novel gene, the gene for a novel protein similar to opioid growth factor receptor and a CpG island, complete sequence Length = 108253 | 13 | not_full | FUS_RINDR (P41356) Fusion glycoprotein F0 precursor [Contains: Fusion glycoprotein F2; Fusion glycoprotein F1] Length = 546 | 35 | -- | --- | - | -- | --- | - |
| baak4h03 | 633 | AV910401 | not_full | ref|NM_192031.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 591 | 43 | not_full | RS20_SYNPX (Q7U8K6) 30S ribosomal protein S20 Length = 98 | 217 | -- | --- | - | -- | --- | - |
| baak4h02 | 528 | AV832516 | not_full | dbj|AK064510.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-E05, full insert sequence Length = 1575 | 34 | not_full | YATE_SCHPO (Q09779) Hypothetical protein C1D4.14 in chromosome I Length = 1628 | 1 | -- | --- | - | -- | --- | - |
| baak4h01 | 485 | AV910400 | not_full | emb|X15233.1|TAPGKCHL Wheat mRNA for chloroplast phosphoglycerate kinase (EC 2.7.2.3) Length = 1605 | 231 | not_full | PGKH_WHEAT (P12782) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) Length = 480 | 265 | -- | --- | - | -- | --- | - |
| baak4g24 | 300 | AV910399 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| baak4g23 | 491 | AV910398 | not_full | gb|BT016462.1| Zea mays clone Contig295 mRNA sequence Length = 1014 | 500 | not_full | HSP71_ARATH (P22953) Heat shock cognate 70 kDa protein 1 (Hsc70.1) Length = 651 | 176 | -- | --- | - | -- | --- | - |
| baak4g22 | 622 | AV910397 | not_full | gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 | 407 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 166 | -- | --- | - | -- | --- | - |
| baak4g21 | 512 | AV910396 | not_full | dbj|AK058557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D05, full insert sequence Length = 1064 | 35 | not_full | YB92_YEAST (P38331) Hypothetical 27.6 kDa protein in THI2-ALG7 intergenic region Length = 238 | 18 | -- | --- | - | -- | --- | - |
| baak4g20 | 481 | AV910395 | not_full | emb|X68655.1|HVCW18 H.vulgare Cw-18 mRNA Length = 732 | 500 | not_full | NLTP8_HORVU (Q43871) Nonspecific lipid-transfer protein Cw18 precursor (LTP Cw-18) (PKG2316) Length = 115 | 62 | -- | --- | - | -- | --- | - |
| baak4g19 | 174 | AV910394 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 496 | -- | --- | - | -- | --- | - |
| baak4g18 | 545 | AV910393 | not_full | gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 | 500 | not_full | CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor (LHCII type I CAB-3C) (LHCP) Length = 267 | 138 | -- | --- | - | -- | --- | - |
