ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4i05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M98254.1|BLYPSAD Barley PSI-D subunit of photosystem I (PsaD)... 535 e-149
2emb|AJ234406.1|HVU234406 Hordeum vulgare partial mRNA; clone cMW... 474 e-131
3gb|BC035756.1| Homo sapiens, clone IMAGE:5763894, mRNA 234 1e-58
4ref|XM_483783.1| Oryza sativa (japonica cultivar-group), mRNA 198 7e-48
5ref|XM_507339.1| PREDICTED Oryza sativa (japonica cultivar-group... 198 7e-48
6gb|AY224449.1| Oryza sativa (japonica cultivar-group) isolate 23... 198 7e-48
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 198 7e-48
8dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic D... 198 7e-48
9dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic D... 198 7e-48
10dbj|AK120372.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 7e-48
11dbj|AK120366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 7e-48
12dbj|AK072473.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 7e-48
13dbj|AK061775.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 7e-48
14gb|AF147726.1|AF147726 Zea mays ferredoxin-binding subunit (psi-... 157 2e-35
15gb|AF335592.1| Chlamydomonas reinhardtii photosystem I subunit (... 54 3e-04
16emb|X79674.1|CRPSAD C.reinhardtii PsaD mRNA 54 3e-04
17emb|X74419.1|CRPSADA C.reinhardtii psaD mRNA for PSI reaction ce... 54 3e-04
18dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 0.99
19gb|AY857266.1| Hypocrea lixii strain TUB F-452 translation elong... 40 3.9
20ref|NM_054077.2| Mus musculus proline arginine-rich end leucine-... 40 3.9
21gb|AC126792.15| Medicago truncatula clone mth2-8o8, complete seq... 40 3.9
22emb|AL662779.10| Mouse DNA sequence from clone RP23-177A4 on chr... 40 3.9
23gb|AC008371.4| Drosophila melanogaster, chromosome 2L, region 21... 40 3.9
24dbj|AK037150.1| Mus musculus 6 days neonate skin cDNA, RIKEN ful... 40 3.9
25gb|AC079877.5| Homo sapiens BAC clone RP11-115M4 from 2, complet... 40 3.9
26gb|AE003590.3| Drosophila melanogaster chromosome 2L, section 1 ... 40 3.9
27gb|AC005334.1|AC005334 Drosophila melanogaster DNA sequence (P1s... 40 3.9 
>gb|M98254.1|BLYPSAD Barley PSI-D subunit of photosystem I (PsaD) mRNA, complete cds
          Length = 810

 Score =  535 bits (270), Expect = e-149
 Identities = 279/281 (99%), Gaps = 1/281 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
           ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ggacggcgtctacccggag-aaggtcaacgccggcaggcagggcgtgggacagaacttcc 589

                                                                       
Query: 62  gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 649

                                                                       
Query: 122 acatctaatctcgctcgtacgtcgtatatgtgcatgcttatgcgtacgtgctagttcatc 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 acatctaatctcgctcgtacgtcgtatatgtgcatgcttatgcgtacgtgctagttcatc 709

                                                                       
Query: 182 gaccggtagttattggcgggtggcgatgatgatggacgtcctgtaattttaaaattgtcg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gaccggtagttattggcgggtggcgatgatgatggacgtcctgtaattttaaaattgtcg 769

                                                    
Query: 242 agtttgaatgatggattcggtgataatggttgcatcaggtt 282
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 agtttgaatgatggattcggtgataatggttgcatcaggtt 810
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>emb|AJ234406.1|HVU234406 Hordeum vulgare partial mRNA; clone cMWG0654
          Length = 698

 Score =  474 bits (239), Expect = e-131
 Identities = 282/293 (96%), Gaps = 7/293 (2%)
 Strand = Plus / Minus

                                                                       
Query: 2   ggacggcgtctacccggngnaaggtcaa-cgccggcaggcagggcgtgggacagaacttc 60
           ||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||
Sbjct: 336 ggacggcgtctacccggag-aaggtcaaacgccggcaggcagggcgtgggacagaacttc 278

                                                                       
Query: 61  cgcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cgcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttc 218

                                                                       
Query: 121 gacatctaatctcgctcgtacgtcgtatatgtgcatgctt-atgcg----tacgtgctag 175
           |||||||||||||||||||||||||||||||||||||||| ||| |    || |||||||
Sbjct: 217 gacatctaatctcgctcgtacgtcgtatatgtgcatgcttaatggggcgttaygtgctag 158

                                                                       
Query: 176 ttcatcgaccggtagttattggcgggtggcgatgatgatggacgtcctgtaattttaaaa 235
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ttcatcgaccggtagttactggcgggtggcgatgatgatggacgtcctgtaattttaaaa 98

                                                                
Query: 236 ttgtcgagtttgaatgatggattcggtgataatggttgcatcaggttatatgt 288
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  ttgtcgagtttgaatgatggattcggtgataatggttgcatcaggttatatgt 45
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>gb|BC035756.1| Homo sapiens, clone IMAGE:5763894, mRNA
          Length = 864

 Score =  234 bits (118), Expect = 1e-58
 Identities = 143/150 (95%), Gaps = 5/150 (3%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
           ||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 514 ggacggcgtctacccggag-aaggtcaacgccggcaggcagggcgtggggcagaacttcc 572

                                                                       
Query: 62  gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 632

                                         
Query: 122 acatctaatctcgctcgtacgtcgtatatg 151
           |||||||||||||    |||||||||||||
Sbjct: 633 acatctaatctcg----tacgtcgtatatg 658



 Score =  184 bits (93), Expect = 1e-43
 Identities = 125/133 (93%), Gaps = 7/133 (5%)
 Strand = Plus / Plus

                                                                       
Query: 160 tatgcgtacgtgctagttcatcgaccggtagttattggcgggtggcgatgatgatggacg 219
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tatgcgtacgtgctagttcatcgaccggtagttattggcgggtggcgatgatgatggacg 714

                                                                       
Query: 220 tcctgtaattttaaaattgtcgagtttgaatgatggat----tcggtgataatggttgca 275
           ||||||||||||  ||||||||||||||||||||||||    ||||||||||| | ||||
Sbjct: 715 tcctgtaatttt--aattgtcgagtttgaatgatggattcgatcggtgataat-gatgca 771

                        
Query: 276 tcaggttatatgt 288
           |||||||||||||
Sbjct: 772 tcaggttatatgt 784
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>ref|XM_483783.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 831

 Score =  198 bits (100), Expect = 7e-48
 Identities = 121/127 (95%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
           ||||||||||||||||| | |||||||||||||||||||||||||| || ||||||||||
Sbjct: 529 ggacggcgtctacccggag-aaggtcaacgccggcaggcagggcgtcggccagaacttcc 587

                                                                       
Query: 62  gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 588 gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaacgtcttcg 647

                  
Query: 122 acatcta 128
           |||||||
Sbjct: 648 acatcta 654
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>ref|XM_507339.1| PREDICTED Oryza sativa (japonica cultivar-group), P0604E01.24 mRNA
          Length = 855

 Score =  198 bits (100), Expect = 7e-48
 Identities = 121/127 (95%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
           ||||||||||||||||| | |||||||||||||||||||||||||| || ||||||||||
Sbjct: 553 ggacggcgtctacccggag-aaggtcaacgccggcaggcagggcgtcggccagaacttcc 611

                                                                       
Query: 62  gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 612 gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaacgtcttcg 671

                  
Query: 122 acatcta 128
           |||||||
Sbjct: 672 acatcta 678
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>gb|AY224449.1| Oryza sativa (japonica cultivar-group) isolate 23061 chloroplast
           photosystem I reaction center subunit II precursor-like
           protein mRNA, complete cds
          Length = 612

 Score =  198 bits (100), Expect = 7e-48
 Identities = 121/127 (95%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
           ||||||||||||||||| | |||||||||||||||||||||||||| || ||||||||||
Sbjct: 486 ggacggcgtctacccggag-aaggtcaacgccggcaggcagggcgtcggccagaacttcc 544

                                                                       
Query: 62  gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 545 gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaacgtcttcg 604

                  
Query: 122 acatcta 128
           |||||||
Sbjct: 605 acatcta 611
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  198 bits (100), Expect = 7e-48
 Identities = 121/127 (95%), Gaps = 1/127 (0%)
 Strand = Plus / Minus

                                                                            
Query: 2        ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
                ||||||||||||||||| | |||||||||||||||||||||||||| || ||||||||||
Sbjct: 28076446 ggacggcgtctacccggag-aaggtcaacgccggcaggcagggcgtcggccagaacttcc 28076388

                                                                            
Query: 62       gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
                |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 28076387 gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaacgtcttcg 28076328

                       
Query: 122      acatcta 128
                |||||||
Sbjct: 28076327 acatcta 28076321
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>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0562A06
          Length = 154198

 Score =  198 bits (100), Expect = 7e-48
 Identities = 121/127 (95%), Gaps = 1/127 (0%)
 Strand = Plus / Minus

                                                                          
Query: 2      ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
              ||||||||||||||||| | |||||||||||||||||||||||||| || ||||||||||
Sbjct: 153938 ggacggcgtctacccggag-aaggtcaacgccggcaggcagggcgtcggccagaacttcc 153880

                                                                          
Query: 62     gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
              |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 153879 gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaacgtcttcg 153820

                     
Query: 122    acatcta 128
              |||||||
Sbjct: 153819 acatcta 153813
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>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0604E01
          Length = 159049

 Score =  198 bits (100), Expect = 7e-48
 Identities = 121/127 (95%), Gaps = 1/127 (0%)
 Strand = Plus / Minus

                                                                         
Query: 2     ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
             ||||||||||||||||| | |||||||||||||||||||||||||| || ||||||||||
Sbjct: 73941 ggacggcgtctacccggag-aaggtcaacgccggcaggcagggcgtcggccagaacttcc 73883

                                                                         
Query: 62    gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
             |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 73882 gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaacgtcttcg 73823

                    
Query: 122   acatcta 128
             |||||||
Sbjct: 73822 acatcta 73816
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>dbj|AK120372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070L10, full
           insert sequence
          Length = 855

 Score =  198 bits (100), Expect = 7e-48
 Identities = 121/127 (95%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
           ||||||||||||||||| | |||||||||||||||||||||||||| || ||||||||||
Sbjct: 553 ggacggcgtctacccggag-aaggtcaacgccggcaggcagggcgtcggccagaacttcc 611

                                                                       
Query: 62  gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 612 gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaacgtcttcg 671

                  
Query: 122 acatcta 128
           |||||||
Sbjct: 672 acatcta 678
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>dbj|AK120366.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069H06, full
           insert sequence
          Length = 397

 Score =  198 bits (100), Expect = 7e-48
 Identities = 121/127 (95%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
           ||||||||||||||||| | |||||||||||||||||||||||||| || ||||||||||
Sbjct: 120 ggacggcgtctacccggag-aaggtcaacgccggcaggcagggcgtcggccagaacttcc 178

                                                                       
Query: 62  gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 179 gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaacgtcttcg 238

                  
Query: 122 acatcta 128
           |||||||
Sbjct: 239 acatcta 245
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>dbj|AK072473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114B22, full
            insert sequence
          Length = 2756

 Score =  198 bits (100), Expect = 7e-48
 Identities = 121/127 (95%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
            ||||||||||||||||| | |||||||||||||||||||||||||| || ||||||||||
Sbjct: 2454 ggacggcgtctacccggag-aaggtcaacgccggcaggcagggcgtcggccagaacttcc 2512

                                                                        
Query: 62   gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
            |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 2513 gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaacgtcttcg 2572

                   
Query: 122  acatcta 128
            |||||||
Sbjct: 2573 acatcta 2579
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>dbj|AK061775.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D04, full
           insert sequence
          Length = 831

 Score =  198 bits (100), Expect = 7e-48
 Identities = 121/127 (95%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
           ||||||||||||||||| | |||||||||||||||||||||||||| || ||||||||||
Sbjct: 529 ggacggcgtctacccggag-aaggtcaacgccggcaggcagggcgtcggccagaacttcc 587

                                                                       
Query: 62  gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 588 gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaacgtcttcg 647

                  
Query: 122 acatcta 128
           |||||||
Sbjct: 648 acatcta 654
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>gb|AF147726.1|AF147726 Zea mays ferredoxin-binding subunit (psi-d1) mRNA, complete cds
          Length = 646

 Score =  157 bits (79), Expect = 2e-35
 Identities = 112/122 (91%), Gaps = 1/122 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggacggcgtctacccggngnaaggtcaacgccggcaggcagggcgtgggacagaacttcc 61
           ||||||||||||||||| | ||||||||| |||||||| ||||||| || ||||||||||
Sbjct: 264 ggacggcgtctacccggag-aaggtcaaccccggcagggagggcgtcggccagaacttcc 322

                                                                       
Query: 62  gcagcatcggcaagaacgtcagccccatcgaggtcaagttcaccggcaagaactccttcg 121
           ||||||||||||||||||||| ||||||||| ||||||||||||||||||| | ||||||
Sbjct: 323 gcagcatcggcaagaacgtcaaccccatcgacgtcaagttcaccggcaagagcaccttcg 382

             
Query: 122 ac 123
           ||
Sbjct: 383 ac 384
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>gb|AF335592.1| Chlamydomonas reinhardtii photosystem I subunit (PsaD) gene, complete
            cds; nuclear gene for chloroplast product
          Length = 2046

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 52   cagaacttccgcagcatcggcaagaacgtcagccccatcgaggtcaagttc 102
            |||||| | ||| |||||||| ||||||||| ||||||| |||||||||||
Sbjct: 1331 cagaacatgcgccgcatcggccagaacgtcaaccccatcaaggtcaagttc 1381
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>emb|X79674.1|CRPSAD C.reinhardtii PsaD mRNA
          Length = 991

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 52  cagaacttccgcagcatcggcaagaacgtcagccccatcgaggtcaagttc 102
           |||||| | ||| |||||||| ||||||||| ||||||| |||||||||||
Sbjct: 526 cagaacatgcgccgcatcggccagaacgtcaaccccatcaaggtcaagttc 576
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>emb|X74419.1|CRPSADA C.reinhardtii psaD mRNA for PSI reaction center, subunit II
          Length = 978

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 52  cagaacttccgcagcatcggcaagaacgtcagccccatcgaggtcaagttc 102
           |||||| | ||| |||||||| ||||||||| ||||||| |||||||||||
Sbjct: 520 cagaacatgcgccgcatcggccagaacgtcaaccccatcaaggtcaagttc 570
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 62      gcagcatcggcaagaacgtcagccccatcgagg 94
               |||||||||||| ||||| |||| |||||||||
Sbjct: 7769308 gcagcatcggcaggaacggcagcaccatcgagg 7769276
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>gb|AY857266.1| Hypocrea lixii strain TUB F-452 translation elongation factor 1
           alpha (tef1) gene, partial sequence
          Length = 921

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  caagttcaccggcaagaactcctt 119
           ||||||||||||||||| ||||||
Sbjct: 829 caagttcaccggcaagacctcctt 852
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>ref|NM_054077.2| Mus musculus proline arginine-rich end leucine-rich repeat (Prelp),
            mRNA
          Length = 3606

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  caagaactccttcgacatct 127
            ||||||||||||||||||||
Sbjct: 981  caagaactccttcgacatct 1000
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>gb|AC126792.15| Medicago truncatula clone mth2-8o8, complete sequence
          Length = 105297

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 223  tgtaattttaaaattgtcgagttt 246
            ||||||||||||| ||||||||||
Sbjct: 3801 tgtaattttaaaagtgtcgagttt 3778
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>emb|AL662779.10| Mouse DNA sequence from clone RP23-177A4 on chromosome 11 Contains the
              Kif2b gene for kinesin family member 28, complete sequence
          Length = 231926

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 249    atgatggattcggtgataatggtt 272
              ||||||||||| ||||||||||||
Sbjct: 212459 atgatggattctgtgataatggtt 212482
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>gb|AC008371.4| Drosophila melanogaster, chromosome 2L, region 21D-21D, BAC clone
             BACR22C14, complete sequence
          Length = 163461

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   taattttaaaattgtcgagt 244
             ||||||||||||||||||||
Sbjct: 30766 taattttaaaattgtcgagt 30785
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>dbj|AK037150.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:A030001H09 product:proline arginine-rich
            end leucine-rich repeat, full insert sequence
          Length = 3606

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  caagaactccttcgacatct 127
            ||||||||||||||||||||
Sbjct: 981  caagaactccttcgacatct 1000
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>gb|AC079877.5| Homo sapiens BAC clone RP11-115M4 from 2, complete sequence
          Length = 85297

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   ttgaatgatggattcggtga 264
             ||||||||||||||||||||
Sbjct: 75597 ttgaatgatggattcggtga 75578
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>gb|AE003590.3| Drosophila melanogaster chromosome 2L, section 1 of 83 of the complete
              sequence
          Length = 305900

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    taattttaaaattgtcgagt 244
              ||||||||||||||||||||
Sbjct: 206744 taattttaaaattgtcgagt 206763
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>gb|AC005334.1|AC005334 Drosophila melanogaster DNA sequence (P1s DS08221 (D130) and DS00738
             (D271)), complete sequence
          Length = 111448

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   taattttaaaattgtcgagt 244
             ||||||||||||||||||||
Sbjct: 25572 taattttaaaattgtcgagt 25553


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,948,651
Number of Sequences: 3902068
Number of extensions: 1948651
Number of successful extensions: 34955
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34873
Number of HSP's gapped (non-prelim): 66
length of query: 298
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 276
effective length of database: 17,147,199,772
effective search space: 4732627137072
effective search space used: 4732627137072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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