>dbj|AK104849.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A01, full
           insert sequence
          Length = 1063

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 69/83 (83%), Gaps = 3/83 (3%)
 Strand = Plus / Plus

                                                                       
Query: 394 taccaccatttggctccttcatctgatgattcttactaccgttctcgagtggatccagtg 453
           |||| ||||||||||||   |||||||| | | || || ||||||| |||||||||| ||
Sbjct: 173 taccgccatttggctcc---atctgatgttccatattatcgttctcaagtggatccactg 229

                                  
Query: 454 catgagcgcgttgctgccagaac 476
           | ||| || ||||||||||||||
Sbjct: 230 cctgatcgtgttgctgccagaac 252

>dbj|AK073517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040I03, full
            insert sequence
          Length = 2636

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 69/83 (83%), Gaps = 3/83 (3%)
 Strand = Plus / Plus

                                                                        
Query: 394  taccaccatttggctccttcatctgatgattcttactaccgttctcgagtggatccagtg 453
            |||| ||||||||||||   |||||||| | | || || ||||||| |||||||||| ||
Sbjct: 1731 taccgccatttggctcc---atctgatgttccatattatcgttctcaagtggatccactg 1787

                                   
Query: 454  catgagcgcgttgctgccagaac 476
            | ||| || ||||||||||||||
Sbjct: 1788 cctgatcgtgttgctgccagaac 1810



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 163  catgttcctcctcctgaggactcatatagggcaacacactttgctcca 210
            ||||||||||| ||| | |||| ||| |||||||||| ||||| ||||
Sbjct: 1488 catgttcctccccctaaagacttatacagggcaacacgctttgatcca 1535

>dbj|AK066970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089B21, full
            insert sequence
          Length = 2977

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 69/83 (83%), Gaps = 3/83 (3%)
 Strand = Plus / Plus

                                                                        
Query: 394  taccaccatttggctccttcatctgatgattcttactaccgttctcgagtggatccagtg 453
            |||| ||||||||||||   |||||||| | | || || ||||||| |||||||||| ||
Sbjct: 1683 taccgccatttggctcc---atctgatgttccatattatcgttctcaagtggatccactg 1739

                                   
Query: 454  catgagcgcgttgctgccagaac 476
            | ||| || ||||||||||||||
Sbjct: 1740 cctgatcgtgttgctgccagaac 1762



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 163  catgttcctcctcctgaggactcatatagggcaacacactttgctcca 210
            ||||||||||| ||| | |||| ||| |||||||||| ||||| ||||
Sbjct: 1440 catgttcctccccctaaagacttatacagggcaacacgctttgatcca 1487

>ref|XM_661397.1| Cryptosporidium hominis TU502 zinc-finger protein zpr1 (Chro.20130)
           partial mRNA
          Length = 528

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 231 tggtcaatttgtccaggatgatca 254
           ||||||||||||||||||||||||
Sbjct: 405 tggtcaatttgtccaggatgatca 428

>ref|XM_626343.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_1170),
            partial mRNA
          Length = 1428

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 231  tggtcaatttgtccaggatgatca 254
            ||||||||||||||||||||||||
Sbjct: 1305 tggtcaatttgtccaggatgatca 1328

>gb|AC122347.4| Mus musculus BAC clone RP23-368O1 from chromosome 5, complete sequence
          Length = 191186

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 292    caacacattcctcttgccccag 313
              ||||||||||||||||||||||
Sbjct: 120073 caacacattcctcttgccccag 120094

>gb|AC158590.3| Mus musculus chromosome 5, clone RP24-388K6, complete sequence
          Length = 186514

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 292   caacacattcctcttgccccag 313
             ||||||||||||||||||||||
Sbjct: 76062 caacacattcctcttgccccag 76083

>ref|XM_654030.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1518.2), mRNA
          Length = 2346

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 72  tgaaaggtacggccatgaagaaagt 96
           ||||||||| |||||||||||||||
Sbjct: 782 tgaaaggtagggccatgaagaaagt 758

>gb|AY626554.1| Stomoxys calcitrans clone ScA3 microsatellite sequence
          Length = 548

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 341 ggcctcactatatgccttct 360
           ||||||||||||||||||||
Sbjct: 360 ggcctcactatatgccttct 341

>gb|BT016250.1| Zea mays clone Contig83 mRNA sequence
          Length = 1277

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 294 acacattcctcttgccccagagcctcgccatgttcc 329
           ||||||||||||||  | |||||||||| |||||||
Sbjct: 534 acacattcctcttgttctagagcctcgctatgttcc 569

>emb|AL353633.13| Human DNA sequence from clone RP11-452B18 on chromosome 13 Contains a
             novel pseudogene and a novel gene, complete sequence
          Length = 166649

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   aacatgaagataggccacat 123
             ||||||||||||||||||||
Sbjct: 73873 aacatgaagataggccacat 73892

>ref|XM_784501.1| PREDICTED: Strongylocentrotus purpuratus similar to leucine
           carboxyl methyltransferase (LOC584645), mRNA
          Length = 1308

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  cggccatgaagaaagtaggc 100
           ||||||||||||||||||||
Sbjct: 889 cggccatgaagaaagtaggc 870

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 359     ctgtaccagagcctcggcat 378
               ||||||||||||||||||||
Sbjct: 1537907 ctgtaccagagcctcggcat 1537926

>gb|AC114786.4| Homo sapiens BAC clone RP11-618I10 from 4, complete sequence
          Length = 148977

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    tcacatatattatcaacaag 271
              ||||||||||||||||||||
Sbjct: 117971 tcacatatattatcaacaag 117990



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   tcacatatattatcaacaag 271
             ||||||||||||||||||||
Sbjct: 10605 tcacatatattatcaacaag 10624

>gb|AC112909.4| Homo sapiens 3 BAC RP11-814O5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114411

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   gcaacacactttgctccatt 212
             ||||||||||||||||||||
Sbjct: 97879 gcaacacactttgctccatt 97898

>gb|AC182428.2| Pan troglodytes BAC clone CH251-637G21 from chromosome 4, complete
              sequence
          Length = 210098

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    tcacatatattatcaacaag 271
              ||||||||||||||||||||
Sbjct: 127363 tcacatatattatcaacaag 127382

>ref|NM_060614.2| Caenorhabditis elegans Y47H9C.8 (Y47H9C.8) mRNA, complete cds
          Length = 1231

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 197 cacactttgctccatttcct 216
           ||||||||||||||||||||
Sbjct: 782 cacactttgctccatttcct 801

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                               
Query: 163     catgttcctcctcctgaggactcatatagggcaacacactttgctcca 210
               ||||||||||| ||| | |||| ||| |||||||||| ||||| ||||
Sbjct: 6610620 catgttcctccccctaaagacttatacagggcaacacgctttgatcca 6610573

>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    gccccagagcctcgccatgt 326
              ||||||||||||||||||||
Sbjct: 125258 gccccagagcctcgccatgt 125277

>gb|AC009471.5| Homo sapiens BAC clone RP11-168K7 from 2, complete sequence
          Length = 172445

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    cactgtacaccaatcagctctaag 59
             |||||| |||||||||||||||||
Sbjct: 76914 cactgttcaccaatcagctctaag 76937



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    cactgtacaccaatcagctctaag 59
             |||||| |||||||||||||||||
Sbjct: 76849 cactgttcaccaatcagctctaag 76872



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    cactgtacaccaatcagctctaag 59
             |||||| |||||||||||||||||
Sbjct: 76784 cactgttcaccaatcagctctaag 76807

>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0425F05
          Length = 162858

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 163   catgttcctcctcctgaggactcatatagggcaacacactttgctcca 210
             ||||||||||| ||| | |||| ||| |||||||||| ||||| ||||
Sbjct: 44746 catgttcctccccctaaagacttatacagggcaacacgctttgatcca 44699

>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0690H04
          Length = 137319

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                              
Query: 163    catgttcctcctcctgaggactcatatagggcaacacactttgctcca 210
              ||||||||||| ||| | |||| ||| |||||||||| ||||| ||||
Sbjct: 126996 catgttcctccccctaaagacttatacagggcaacacgctttgatcca 126949

>gb|AY108785.1| Zea mays PCO127498 mRNA sequence
          Length = 802

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 294 acacattcctcttgccccagagcctcgccatgttcc 329
           ||||||||||||||  | |||||||||| |||||||
Sbjct: 152 acacattcctcttgttctagagcctcgctatgttcc 187

>gb|AY530786.1| Aspergillus niger alpha-1,3-glucan synthase (AgsA) gene, complete cds
          Length = 10173

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 432  ccgttctcgagtggatccag 451
            ||||||||||||||||||||
Sbjct: 7737 ccgttctcgagtggatccag 7756

>gb|AC164875.14| Mus musculus chromosome 1, clone RP23-59P14, complete sequence
          Length = 250957

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 245    aggatgatcacatatattatcaac 268
              ||||||||||||| ||||||||||
Sbjct: 109544 aggatgatcacatttattatcaac 109567


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,111,129
Number of Sequences: 3902068
Number of extensions: 4111129
Number of successful extensions: 67021
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66915
Number of HSP's gapped (non-prelim): 106
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)