Clone Name | baak4i02 |
---|---|
Clone Library Name | barley_pub |
>OR4K3_HUMAN (Q96R72) Olfactory receptor 4K3| Length = 315 Score = 32.7 bits (73), Expect = 0.45 Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 12/80 (15%) Frame = +3 Query: 246 ILSWHDGTIHPICQLAYSRNLHF-----------SRPVIVAFSCIRSFAIMTNLWNRMNT 392 ILSW G H + QLA++ NL F P+++ +C+ ++ + + + Sbjct: 146 ILSWIVGIFHALSQLAFTVNLPFCGPNEVDSFFCDLPLVIKLACVDTYILGVFMISTSGM 205 Query: 393 V-LELYLLLIFGHRVFLALV 449 + L ++LL+ + + L V Sbjct: 206 IALVCFILLVISYTIILVTV 225
>ZG67_XENLA (P18734) Gastrula zinc finger protein XLCGF67.1 (Fragment)| Length = 139 Score = 32.3 bits (72), Expect = 0.59 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +2 Query: 236 DCGYTFLARWHHSSHLSTRLFQKPAL**ACYRCF 337 +CG +FL+R H ++HL T +KP C +CF Sbjct: 37 ECGKSFLSRSHLNTHLRTHTGEKPYSCSECGKCF 70
>OR4KF_HUMAN (Q8NH41) Olfactory receptor 4K15| Length = 324 Score = 30.8 bits (68), Expect = 1.7 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 12/80 (15%) Frame = +3 Query: 246 ILSWHDGTIHPICQLAYSRNLHF-----------SRPVIVAFSCIRSFAIMTNLWNRMNT 392 ++SW G IH QLA++ NL F P++ +CI ++ + + Sbjct: 146 LISWFVGFIHTTSQLAFTVNLPFCGPNKVDSFFCDLPLVTKLACIDTYVVSLLIVADSGF 205 Query: 393 V-LELYLLLIFGHRVFLALV 449 + L +LLL+ + V L V Sbjct: 206 LSLSSFLLLVVSYTVILVTV 225
>ZN546_HUMAN (Q86UE3) Zinc finger protein 546| Length = 836 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Frame = +2 Query: 236 DCGYTFLARWHHSSHLSTRLFQKPAL**ACYRCF*LYQEFCYHDQ---SMEPYE 388 +CG TF +R+H + H +KP + C + F L E H + +PYE Sbjct: 501 ECGKTFSSRYHLTQHYRIHTGEKPYICNECGKAFRLQGELTRHHRIHTCEKPYE 554
>MARH4_HUMAN (Q9P2E8) Membrane-associated RING finger protein 4| (Membrane-associated RING-CH protein IV) (MARCH-IV) (RING finger protein 174) Length = 410 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/40 (27%), Positives = 19/40 (47%) Frame = +3 Query: 180 LRWW*WCAVASYVCLWLRLTADILSWHDGTIHPICQLAYS 299 L WW WC + + C L A + H G + C++ ++ Sbjct: 8 LLWWWWCCCSGWYCYGLCAPAPQMLRHQGLLKCRCRMLFN 47
>OR4L1_HUMAN (Q8NH43) Olfactory receptor 4L1 (Olfactory receptor OR14-28)| Length = 312 Score = 29.3 bits (64), Expect = 5.0 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 12/83 (14%) Frame = +3 Query: 246 ILSWHDGTIHPICQLAYSRNLHF-----------SRPVIVAFSCIRSFAI-MTNLWNRMN 389 ILSW G +H I Q+ + NL F P+++ +CI ++ + + + + Sbjct: 146 ILSWIIGFLHSISQIVLTMNLPFCGHNVINNIFCDLPLVIKLACIETYTLELFVIADSGL 205 Query: 390 TVLELYLLLIFGHRVFLALV*KK 458 ++LL+ + V L V KK Sbjct: 206 LSFTCFILLLVSYIVILVSVPKK 228
>GLI4_HUMAN (P10075) Zinc finger protein GLI4 (Krueppel-related zinc finger| protein 4) (HKR4 protein) Length = 376 Score = 28.9 bits (63), Expect = 6.6 Identities = 15/45 (33%), Positives = 19/45 (42%) Frame = +2 Query: 236 DCGYTFLARWHHSSHLSTRLFQKPAL**ACYRCF*LYQEFCYHDQ 370 DCG F R H HL T +KP AC + F + H + Sbjct: 327 DCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQR 371
>STT7_CHLRE (Q84V18) Serine/threonine-protein kinase stt7, chloroplast| precursor (EC 2.7.11.1) Length = 754 Score = 28.9 bits (63), Expect = 6.6 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = -3 Query: 413 QQIKLQNSVHTVP*IGHDSKTPDTTKSNDNRPTK-VQVSGISELTDGMNGAIVPRKYI-- 243 Q ++ + H+V + D K + S ++ K + + ++L G+N VP +Y+ Sbjct: 285 QLVQAVAACHSVGIVHRDIKPANCIVSERDKKIKLIDLGAAADLRIGIN--YVPNEYLLD 342 Query: 242 -RSQPQPKTNIASYSTPSPPPQ 180 R P P+ I S TP PPP+ Sbjct: 343 PRYAP-PQQYIMSTQTPKPPPK 363
>ZG16_XENLA (P18712) Gastrula zinc finger protein XLCGF16.1 (Fragment)| Length = 112 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 236 DCGYTFLARWHHSSHLSTRLFQKPAL**ACYRCF 337 +CG F R H +SH T +K L AC +CF Sbjct: 66 ECGKCFSRRSHLNSHHKTHTGEKSFLCFACGKCF 99
>VP2_AHSV6 (O71024) Outer capsid protein VP2| Length = 1051 Score = 28.5 bits (62), Expect = 8.6 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 338 KSNDNRPTKVQVSGISELTDGMNGAI 261 + N+N+P KVQ+ G+S LT G + Sbjct: 400 QGNNNKPLKVQIDGVSILTSEKYGTV 425
>YL37_CAEEL (P34428) Hypothetical protein F44B9.7| Length = 466 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/41 (31%), Positives = 19/41 (46%) Frame = -3 Query: 320 PTKVQVSGISELTDGMNGAIVPRKYIRSQPQPKTNIASYST 198 P + S + M P+ +IR PQ +TN+ YST Sbjct: 242 PQQTSASSQQRAQETMAQQTEPQSHIRESPQKETNLEKYST 282
>GUTR1_DROME (Q9NDM2) Gustatory receptor trehalose 1 (Trehalose receptor 1)| Length = 392 Score = 28.5 bits (62), Expect = 8.6 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +3 Query: 225 WLRLTADILSWHDGTIHPICQLAYSRN 305 WL + A +++W I+PI A +RN Sbjct: 303 WLHIIASVMAWASSVINPIIYAASNRN 329 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,947,179 Number of Sequences: 219361 Number of extensions: 722499 Number of successful extensions: 3061 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2751 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3049 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)