Clone Name | baak4i04 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ582621.1|OSA582621 Oryza sativa (japonica cultivar-group) mRNA for NADPH thioredoxin reductase (NtrC gene) Length = 1684 Score = 595 bits (300), Expect = e-167 Identities = 459/512 (89%) Strand = Plus / Plus Query: 29 cttcgattacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgt 88 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 534 cttcgattacctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgt 593 Query: 89 gatggagcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagataca 148 ||||||||||| || || | ||||||||||||||||| || ||||||||||| |||||| Sbjct: 594 gatggagcatccccactatttaagggtcaagttcttgcagttgttggaggtggtgataca 653 Query: 149 gctaccgaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcga 208 ||||| |||||||| ||||||||||| |||||||| | || |||||||||||||||||| Sbjct: 654 gctacagaggaagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcga 713 Query: 209 agggaccaactacgagcatccaaagctatgcaggaccgagtactcaacaaccccaacata 268 | ||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 714 aaggatcagctacgagcatccaaagctatgcaggaccgagtactcaacaatcccaacata 773 Query: 269 acagtacatttcaatacagaagctgtggatgttgtcggcaataccaaaggacagatgtcc 328 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 774 acagtacatttcaatacagaagctgtggatgttgtcagcaatcccaaaggccagatgtct 833 Query: 329 ggtattcagttgaggagaatcgatactggagaggaaaaagttcttgaagtgaaaggtcta 388 |||||||| ||| ||||| ||| || ||||||||| ||||||||| |||||||||||| Sbjct: 834 ggtattcaactgaagagaaccgacacgggagaggaatcagttcttgaggtgaaaggtcta 893 Query: 389 ttttatgggatagggcatactccaaatagtcagctgctagaaggtcaaattgaacttgat 448 || ||||| ||||| || |||||||| |||||| || || ||||||||||||| ||||| Sbjct: 894 ttctatggcataggacacactccaaacagtcagttgttacaaggtcaaattgatcttgac 953 Query: 449 agttctggatatattttggttgaggaaggcacggcaaaaacttcagttgatggcgtattt 508 | |||| |||||||||||||| |||||||| |||||||| ||||||||||| |||||| Sbjct: 954 gatgctggttatattttggttgaagaaggcacagcaaaaacatcagttgatggtgtattt 1013 Query: 509 gctgctggtgatgtgcaggatcatgaatggag 540 |||||||||||||||||||||||||||||||| Sbjct: 1014 gctgctggtgatgtgcaggatcatgaatggag 1045
>dbj|AK068311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L11, full insert sequence Length = 1847 Score = 331 bits (167), Expect = 1e-87 Identities = 263/295 (89%) Strand = Plus / Plus Query: 246 gagtactcaacaaccccaacataacagtacatttcaatacagaagctgtggatgttgtcg 305 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 gagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgttgtca 860 Query: 306 gcaataccaaaggacagatgtccggtattcagttgaggagaatcgatactggagaggaaa 365 ||||| ||||||| |||||||| |||||||| ||| ||||| ||| || ||||||||| Sbjct: 861 gcaatcccaaaggccagatgtctggtattcaactgaagagaaccgacacgggagaggaat 920 Query: 366 aagttcttgaagtgaaaggtctattttatgggatagggcatactccaaatagtcagctgc 425 ||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| || Sbjct: 921 cagttcttgaggtgaaaggtctattctatggcataggacacactccaaacagtcagttgt 980 Query: 426 tagaaggtcaaattgaacttgatagttctggatatattttggttgaggaaggcacggcaa 485 || ||||||||||||| ||||| | |||| |||||||||||||| |||||||| |||| Sbjct: 981 tacaaggtcaaattgatcttgacgatgctggttatattttggttgaagaaggcacagcaa 1040 Query: 486 aaacttcagttgatggcgtatttgctgctggtgatgtgcaggatcatgaatggag 540 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1041 aaacatcagttgatggtgtatttgctgctggtgatgtgcaggatcatgaatggag 1095 Score = 266 bits (134), Expect = 7e-68 Identities = 197/218 (90%) Strand = Plus / Plus Query: 29 cttcgattacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgt 88 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 561 cttcgattacctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgt 620 Query: 89 gatggagcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagataca 148 ||||||||||| || || | ||||||||||||||||| || ||||||||||| |||||| Sbjct: 621 gatggagcatccccactatttaagggtcaagttcttgcagttgttggaggtggtgataca 680 Query: 149 gctaccgaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcga 208 ||||| |||||||| ||||||||||| |||||||| | || |||||||||||||||||| Sbjct: 681 gctacagaggaagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcga 740 Query: 209 agggaccaactacgagcatccaaagctatgcaggaccg 246 | ||| || ||||||||||||||||||||||||||||| Sbjct: 741 aaggatcagctacgagcatccaaagctatgcaggaccg 778
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 305 bits (154), Expect = 8e-80 Identities = 250/282 (88%) Strand = Plus / Plus Query: 246 gagtactcaacaaccccaacataacagtacatttcaatacagaagctgtggatgttgtcg 305 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27643200 gagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgttgtca 27643259 Query: 306 gcaataccaaaggacagatgtccggtattcagttgaggagaatcgatactggagaggaaa 365 ||||| ||||||| |||||||| |||||||| ||| ||||| ||| || ||||||||| Sbjct: 27643260 gcaatcccaaaggccagatgtctggtattcaactgaagagaaccgacacgggagaggaat 27643319 Query: 366 aagttcttgaagtgaaaggtctattttatgggatagggcatactccaaatagtcagctgc 425 ||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| || Sbjct: 27643320 cagttcttgaggtgaaaggtctattctatggcataggacacactccaaacagtcagttgt 27643379 Query: 426 tagaaggtcaaattgaacttgatagttctggatatattttggttgaggaaggcacggcaa 485 || ||||||||||||| ||||| | |||| |||||||||||||| |||||||| |||| Sbjct: 27643380 tacaaggtcaaattgatcttgacgatgctggttatattttggttgaagaaggcacagcaa 27643439 Query: 486 aaacttcagttgatggcgtatttgctgctggtgatgtgcagg 527 |||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 27643440 aaacatcagttgatggtgtatttgctgctggtgatgtgcagg 27643481 Score = 266 bits (134), Expect = 7e-68 Identities = 197/218 (90%) Strand = Plus / Plus Query: 29 cttcgattacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgt 88 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 27642323 cttcgattacctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgt 27642382 Query: 89 gatggagcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagataca 148 ||||||||||| || || | ||||||||||||||||| || ||||||||||| |||||| Sbjct: 27642383 gatggagcatccccactatttaagggtcaagttcttgcagttgttggaggtggtgataca 27642442 Query: 149 gctaccgaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcga 208 ||||| |||||||| ||||||||||| |||||||| | || |||||||||||||||||| Sbjct: 27642443 gctacagaggaagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcga 27642502 Query: 209 agggaccaactacgagcatccaaagctatgcaggaccg 246 | ||| || ||||||||||||||||||||||||||||| Sbjct: 27642503 aaggatcagctacgagcatccaaagctatgcaggaccg 27642540
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 305 bits (154), Expect = 8e-80 Identities = 250/282 (88%) Strand = Plus / Plus Query: 246 gagtactcaacaaccccaacataacagtacatttcaatacagaagctgtggatgttgtcg 305 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100193 gagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgttgtca 100252 Query: 306 gcaataccaaaggacagatgtccggtattcagttgaggagaatcgatactggagaggaaa 365 ||||| ||||||| |||||||| |||||||| ||| ||||| ||| || ||||||||| Sbjct: 100253 gcaatcccaaaggccagatgtctggtattcaactgaagagaaccgacacgggagaggaat 100312 Query: 366 aagttcttgaagtgaaaggtctattttatgggatagggcatactccaaatagtcagctgc 425 ||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| || Sbjct: 100313 cagttcttgaggtgaaaggtctattctatggcataggacacactccaaacagtcagttgt 100372 Query: 426 tagaaggtcaaattgaacttgatagttctggatatattttggttgaggaaggcacggcaa 485 || ||||||||||||| ||||| | |||| |||||||||||||| |||||||| |||| Sbjct: 100373 tacaaggtcaaattgatcttgacgatgctggttatattttggttgaagaaggcacagcaa 100432 Query: 486 aaacttcagttgatggcgtatttgctgctggtgatgtgcagg 527 |||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 100433 aaacatcagttgatggtgtatttgctgctggtgatgtgcagg 100474 Score = 266 bits (134), Expect = 7e-68 Identities = 197/218 (90%) Strand = Plus / Plus Query: 29 cttcgattacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgt 88 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 99316 cttcgattacctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgt 99375 Query: 89 gatggagcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagataca 148 ||||||||||| || || | ||||||||||||||||| || ||||||||||| |||||| Sbjct: 99376 gatggagcatccccactatttaagggtcaagttcttgcagttgttggaggtggtgataca 99435 Query: 149 gctaccgaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcga 208 ||||| |||||||| ||||||||||| |||||||| | || |||||||||||||||||| Sbjct: 99436 gctacagaggaagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcga 99495 Query: 209 agggaccaactacgagcatccaaagctatgcaggaccg 246 | ||| || ||||||||||||||||||||||||||||| Sbjct: 99496 aaggatcagctacgagcatccaaagctatgcaggaccg 99533
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 305 bits (154), Expect = 8e-80 Identities = 250/282 (88%) Strand = Plus / Plus Query: 246 gagtactcaacaaccccaacataacagtacatttcaatacagaagctgtggatgttgtcg 305 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22302 gagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgttgtca 22361 Query: 306 gcaataccaaaggacagatgtccggtattcagttgaggagaatcgatactggagaggaaa 365 ||||| ||||||| |||||||| |||||||| ||| ||||| ||| || ||||||||| Sbjct: 22362 gcaatcccaaaggccagatgtctggtattcaactgaagagaaccgacacgggagaggaat 22421 Query: 366 aagttcttgaagtgaaaggtctattttatgggatagggcatactccaaatagtcagctgc 425 ||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| || Sbjct: 22422 cagttcttgaggtgaaaggtctattctatggcataggacacactccaaacagtcagttgt 22481 Query: 426 tagaaggtcaaattgaacttgatagttctggatatattttggttgaggaaggcacggcaa 485 || ||||||||||||| ||||| | |||| |||||||||||||| |||||||| |||| Sbjct: 22482 tacaaggtcaaattgatcttgacgatgctggttatattttggttgaagaaggcacagcaa 22541 Query: 486 aaacttcagttgatggcgtatttgctgctggtgatgtgcagg 527 |||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 22542 aaacatcagttgatggtgtatttgctgctggtgatgtgcagg 22583 Score = 266 bits (134), Expect = 7e-68 Identities = 197/218 (90%) Strand = Plus / Plus Query: 29 cttcgattacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgt 88 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 21425 cttcgattacctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgt 21484 Query: 89 gatggagcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagataca 148 ||||||||||| || || | ||||||||||||||||| || ||||||||||| |||||| Sbjct: 21485 gatggagcatccccactatttaagggtcaagttcttgcagttgttggaggtggtgataca 21544 Query: 149 gctaccgaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcga 208 ||||| |||||||| ||||||||||| |||||||| | || |||||||||||||||||| Sbjct: 21545 gctacagaggaagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcga 21604 Query: 209 agggaccaactacgagcatccaaagctatgcaggaccg 246 | ||| || ||||||||||||||||||||||||||||| Sbjct: 21605 aaggatcagctacgagcatccaaagctatgcaggaccg 21642
>ref|NM_129731.3| Arabidopsis thaliana disulfide oxidoreductase/ electron transporter/ oxidoreductase/ thioredoxin-disulfide reductase AT2G41680 mRNA, complete cds Length = 1800 Score = 73.8 bits (37), Expect = 5e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 35 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 94 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 623 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 682 Query: 95 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 154 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 683 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 742 Query: 155 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggac 214 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| || || Sbjct: 743 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcgcagagat 802 Query: 215 caactacgagcatccaaagctatgcaggaccgagtactcaacaaccccaacataacagta 274 || | |||| ||||| |||||||| || |||| ||||||| || ||||| ||||| Sbjct: 803 cagttgagagcttccaaggctatgcaagatagagtgatcaacaatccaaacatcacagtg 862 Query: 275 catttcaatacagaagctgtggatgttgtcggcaataccaaaggacagatgtc 327 |||| ||| || ||| | ||||| || | |||| ||||| ||||||||||| Sbjct: 863 cattacaacacggaaaccgtggacgtattgagcaacaccaagggacagatgtc 915 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 491 tcagttgatggcgtatttgctgctggtgatgtgcaggatcatgaatggag 540 |||||||| || ||||||||||| || ||||||||||| || |||||||| Sbjct: 1079 tcagttgaaggtgtatttgctgcaggagatgtgcaggaccacgaatggag 1128
>gb|BT000516.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680/T32G6.20) mRNA, complete cds Length = 1590 Score = 73.8 bits (37), Expect = 5e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 35 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 94 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 607 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 666 Query: 95 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 154 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 667 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 726 Query: 155 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggac 214 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| || || Sbjct: 727 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcgcagagat 786 Query: 215 caactacgagcatccaaagctatgcaggaccgagtactcaacaaccccaacataacagta 274 || | |||| ||||| |||||||| || |||| ||||||| || ||||| ||||| Sbjct: 787 cagttgagagcttccaaggctatgcaagatagagtgatcaacaatccaaacatcacagtg 846 Query: 275 catttcaatacagaagctgtggatgttgtcggcaataccaaaggacagatgtc 327 |||| ||| || ||| | ||||| || | |||| ||||| ||||||||||| Sbjct: 847 cattacaacacggaaaccgtggacgtattgagcaacaccaagggacagatgtc 899 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 491 tcagttgatggcgtatttgctgctggtgatgtgcaggatcatgaatggag 540 |||||||| || ||||||||||| || ||||||||||| || |||||||| Sbjct: 1063 tcagttgaaggtgtatttgctgcaggagatgtgcaggaccacgaatggag 1112
>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete sequence Length = 91979 Score = 73.8 bits (37), Expect = 5e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 35 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 94 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 79032 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 78973 Query: 95 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 154 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 78972 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 78913 Query: 155 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 207 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 78912 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 78860 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 491 tcagttgatggcgtatttgctgctggtgatgtgcagg 527 |||||||| || ||||||||||| || |||||||||| Sbjct: 78212 tcagttgaaggtgtatttgctgcaggagatgtgcagg 78176
>gb|AY062479.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680; T32G6.20) mRNA, complete cds Length = 1802 Score = 73.8 bits (37), Expect = 5e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 35 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 94 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 617 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 676 Query: 95 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 154 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 677 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 736 Query: 155 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 207 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 737 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 789 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 491 tcagttgatggcgtatttgctgctggtgatgtgcaggatcatgaatggag 540 |||||||| || ||||||||||| || ||||||||||| || |||||||| Sbjct: 1096 tcagttgaaggtgtatttgctgcaggagatgtgcaggaccacgaatggag 1145
>gb|AY056394.1| Arabidopsis thaliana At2g41680/T32G6.20 mRNA, complete cds Length = 1783 Score = 73.8 bits (37), Expect = 5e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 35 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 94 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 620 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 679 Query: 95 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 154 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 680 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 739 Query: 155 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggac 214 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| || || Sbjct: 740 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcgcagagat 799 Query: 215 caactacgagcatccaaagctatgcaggaccgagtactcaacaaccccaacataacagta 274 || | |||| ||||| |||||||| || |||| ||||||| || ||||| ||||| Sbjct: 800 cagttgagagcttccaaggctatgcaagatagagtgatcaacaatccaaacatcacagtg 859 Query: 275 catttcaatacagaagctgtggatgttgtcggcaataccaaaggacagatgtc 327 |||| ||| || ||| | ||||| || | |||| ||||| ||||||||||| Sbjct: 860 cattacaacacggaaaccgtggacgtattgagcaacaccaagggacagatgtc 912 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 491 tcagttgatggcgtatttgctgctggtgatgtgcaggatcatgaatggag 540 |||||||| || ||||||||||| || ||||||||||| || |||||||| Sbjct: 1076 tcagttgaaggtgtatttgctgcaggagatgtgcaggaccacgaatggag 1125
>emb|BX820757.1|CNS0A9JK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1726 Score = 73.8 bits (37), Expect = 5e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 35 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 94 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 613 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 672 Query: 95 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 154 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 673 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 732 Query: 155 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggac 214 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| || || Sbjct: 733 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcgcagagat 792 Query: 215 caactacgagcatccaaagctatgcaggaccgagtactcaacaaccccaacataacagta 274 || | |||| ||||| |||||||| || |||| ||||||| || ||||| ||||| Sbjct: 793 cagttgagagcttccaaggctatgcaagatagagtgatcaacaatccaaacatcacagtg 852 Query: 275 catttcaatacagaagctgtggatgttgtcggcaataccaaaggacagatgtc 327 |||| ||| || ||| | ||||| || | |||| ||||| ||||||||||| Sbjct: 853 cattacaacacggaaaccgtggacgtattgagcaacaccaagggacagatgtc 905 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 491 tcagttgatggcgtatttgctgctggtgatgtgcaggatcatgaatggag 540 |||||||| || ||||||||||| || ||||||||||| || |||||||| Sbjct: 1069 tcagttgaaggtgtatttgctgcaggagatgtgcaggaccacgaatggag 1118
>emb|BX819883.1|CNS0A9GU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS42ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1356 Score = 73.8 bits (37), Expect = 5e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 35 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 94 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 250 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 309 Query: 95 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 154 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 310 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 369 Query: 155 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 207 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 370 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 422 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 491 tcagttgatggcgtatttgctgctggtgatgtgcaggatcatgaatggag 540 |||||||| || ||||||||||| || ||||||||||| || |||||||| Sbjct: 706 tcagttgaaggtgtatttgctgcaggagatgtgcaggaccacgaatggag 755
>emb|BX820128.1|CNS0A9G2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1730 Score = 73.8 bits (37), Expect = 5e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 35 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 94 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 624 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 683 Query: 95 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 154 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 684 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 743 Query: 155 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggac 214 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| || || Sbjct: 744 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcgcagagat 803 Query: 215 caactacgagcatccaaagctatgcaggaccgagtactcaacaaccccaacataacagta 274 || | |||| ||||| |||||||| || |||| ||||||| || ||||| ||||| Sbjct: 804 cagttgagagcttccaaggctatgcaagatagagtgatcaacaatccaaacatcacagtg 863 Query: 275 catttcaatacagaagctgtggatgttgtcggcaataccaaaggacagatgtc 327 |||| ||| || ||| | ||||| || | |||| ||||| ||||||||||| Sbjct: 864 cattacaacacggaaaccgtggacgtattgagcaacaccaagggacagatgtc 916 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 491 tcagttgatggcgtatttgctgctggtgatgtgcaggatcatgaatggag 540 |||||||| || ||||||||||| || ||||||||||| || |||||||| Sbjct: 1079 tcagttgaaggtgtatttgctgcaggagatgtgcaggaccacgaatggag 1128
>gb|AY093250.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680) mRNA, complete cds Length = 803 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 491 tcagttgatggcgtatttgctgctggtgatgtgcaggatcatgaatggag 540 |||||||| || ||||||||||| || ||||||||||| || |||||||| Sbjct: 169 tcagttgaaggtgtatttgctgcaggagatgtgcaggaccacgaatggag 218
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 65 ggtatcagcgcatgtgcaatatgtgatgg 93 ||||| ||||||||||||||||||||||| Sbjct: 1148142 ggtattagcgcatgtgcaatatgtgatgg 1148170
>gb|L36129.1|HNNNTR Helianthus annuus NADPH thioredoxin reductase mRNA, 3' end Length = 491 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 506 tttgctgctggtgatgtgcaggat 529 |||||||||||||||||||||||| Sbjct: 223 tttgctgctggtgatgtgcaggat 246
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 500 ggcgtatttgctgctggtgatgtgcaggatc 530 ||||| |||||||| |||||||||||||||| Sbjct: 3444736 ggcgtgtttgctgccggtgatgtgcaggatc 3444706
>emb|AL596170.1| Listeria innocua Clip11262 complete genome, segment 8/12 Length = 313450 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 427 agaaggtcaaattgaacttgat 448 |||||||||||||||||||||| Sbjct: 122482 agaaggtcaaattgaacttgat 122503
>dbj|AB175670.1| Ovophis okinavensis mitochondrial DNA, complete genome Length = 17388 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 250 actcaacaaccccaacataaca 271 |||||||||||||||||||||| Sbjct: 13569 actcaacaaccccaacataaca 13590
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 427 agaaggtcaaattgaacttgat 448 |||||||||||||||||||||| Sbjct: 1837648 agaaggtcaaattgaacttgat 1837669
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 495 ttgatggcgtatttgctgctggtgatgtg 523 |||||||||| ||||| |||||||||||| Sbjct: 689105 ttgatggcgtgtttgcagctggtgatgtg 689077
>gb|AC157593.4| Mus musculus BAC clone RP23-254B18 from chromosome 16, complete sequence Length = 204167 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 gatatatttgacaaaatatgc 183 ||||||||||||||||||||| Sbjct: 52265 gatatatttgacaaaatatgc 52285
>gb|AC113265.25| Mus musculus strain C57BL/6J clone rp23-46k8 map 17, complete sequence Length = 143758 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 aaggtctattttatgggatag 401 ||||||||||||||||||||| Sbjct: 126788 aaggtctattttatgggatag 126808
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 500 ggcgtatttgctgctggtgatgtgcaggatcat 532 ||||||||||| |||||||||||| ||||||| Sbjct: 1800665 ggcgtatttgccgctggtgatgtgtcggatcat 1800697
>gb|AC093450.20| Mus musculus strain C57BL/6J clone rp23-297j19 map 17, complete sequence Length = 202803 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 aaggtctattttatgggatag 401 ||||||||||||||||||||| Sbjct: 104962 aaggtctattttatgggatag 104982
>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5 Length = 341050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gttggaggtggagatacagct 151 ||||||||||||||||||||| Sbjct: 249327 gttggaggtggagatacagct 249347
>emb|BX470073.8| Zebrafish DNA sequence from clone DKEY-239D21 in linkage group 20, complete sequence Length = 146568 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 caaccccaacataacagtaca 276 ||||||||||||||||||||| Sbjct: 50963 caaccccaacataacagtaca 50983
>gb|M59249.1|PFAPHOSKIN P.falciparum 3-phosphoglycerate kinase gene, complete cds Length = 1377 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gttggaggtggagatacagct 151 ||||||||||||||||||||| Sbjct: 1122 gttggaggtggagatacagct 1142
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 500 ggcgtatttgctgctggtgatgtgcaggatcatgaat 536 ||||| |||||||| || |||||||||||||| |||| Sbjct: 614800 ggcgtgtttgctgcgggcgatgtgcaggatcacgaat 614836
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 aaagttcttgaagtgaaagg 384 |||||||||||||||||||| Sbjct: 103759 aaagttcttgaagtgaaagg 103740
>ref|XM_960162.1| Neurospora crassa OR74A THIOREDOXIN REDUCTASE (NCU08352.1) partial mRNA Length = 1005 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 tttgctgctggtgatgtgcaggat 529 ||||||||||||||||| |||||| Sbjct: 847 tttgctgctggtgatgttcaggat 870
>ref|XM_329397.1| Neurospora crassa OR74A THIOREDOXIN REDUCTASE (NCU08352.1) partial mRNA Length = 1005 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 tttgctgctggtgatgtgcaggat 529 ||||||||||||||||| |||||| Sbjct: 847 tttgctgctggtgatgttcaggat 870
>gb|AC149479.1| Populus trichocarpa clone Pop1-017N13, complete sequence Length = 129742 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 tttgctgctggtgatgtgcaggat 529 ||||||||||||||||| |||||| Sbjct: 5008 tttgctgctggtgatgttcaggat 5031
>gb|AC149427.1| Populus trichocarpa clone Pop1-065A01, complete sequence Length = 84222 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 tttgctgctggtgatgtgcaggat 529 ||||||||||||||||| |||||| Sbjct: 51378 tttgctgctggtgatgttcaggat 51401
>gb|AC129328.4| Mus musculus BAC clone RP23-15O6 from chromosome 17, complete sequence Length = 234041 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 atatatttgacaaaatatgc 183 |||||||||||||||||||| Sbjct: 154499 atatatttgacaaaatatgc 154480
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 gtatttgctgctggtgatgt 522 |||||||||||||||||||| Sbjct: 346982 gtatttgctgctggtgatgt 347001
>gb|AC123834.4| Mus musculus BAC clone RP24-132N9 from chromosome 13, complete sequence Length = 153028 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 atgtgcaggatcatgaatgg 538 |||||||||||||||||||| Sbjct: 76867 atgtgcaggatcatgaatgg 76886
>gb|AC073316.6| Homo sapiens BAC clone RP11-191P7 from 7, complete sequence Length = 148930 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 atcgatactggagaggaaaa 366 |||||||||||||||||||| Sbjct: 134712 atcgatactggagaggaaaa 134731
>gb|DQ366735.1| Uncultured Prochlorococcus marinus clone HOT0M-2B5 genomic sequence Length = 35254 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tgtgcaatatgtgatggagc 96 |||||||||||||||||||| Sbjct: 17891 tgtgcaatatgtgatggagc 17872
>emb|AL357394.11| Human DNA sequence from clone RP11-469B13 on chromosome 10, complete sequence Length = 185850 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 42 gtgaagaagaattttggagcagaggtat 69 ||||||||||| ||||||| |||||||| Sbjct: 104313 gtgaagaagaaatttggagaagaggtat 104340
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 tttgctgctggtgatgtgcaggat 529 ||||||||||||||||| |||||| Sbjct: 503923 tttgctgctggtgatgttcaggat 503946
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggatatattttggttgagga 474 |||||||||||||||||||| Sbjct: 372774 ggatatattttggttgagga 372793
>emb|AL117065.1|CNS01DO1 Botrytis cinerea strain T4 cDNA library Length = 720 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 tttgctgctggtgatgtgcaggat 529 ||||||||||||||||| |||||| Sbjct: 488 tttgctgctggtgatgttcaggat 511
>emb|AL117019.1|CNS01DMR Botrytis cinerea strain T4 cDNA library Length = 720 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 tttgctgctggtgatgtgcaggat 529 ||||||||||||||||| |||||| Sbjct: 489 tttgctgctggtgatgttcaggat 512
>emb|BX548157.5| Zebrafish DNA sequence from clone CH211-201B11 in linkage group 18, complete sequence Length = 195621 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 aaaagttcttgaagtgaaag 383 |||||||||||||||||||| Sbjct: 108519 aaaagttcttgaagtgaaag 108500
>dbj|D78346.1|RIRVR144 Rickettsia typhi gene for 47 kDa protein, complete cds Length = 3024 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 ttgatagttctggatatatt 463 |||||||||||||||||||| Sbjct: 1152 ttgatagttctggatatatt 1171
>dbj|D45049.1|NEUCYS9 Neurospora crassa cys-9 gene for NADPH thioredoxin reductase, complete cds Length = 2425 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 tttgctgctggtgatgtgcaggat 529 ||||||||||||||||| |||||| Sbjct: 2056 tttgctgctggtgatgttcaggat 2079
>gb|L31933.1|RIRGM47G Rickettsia tsutsugamushi (strain Gm47) gene, complete cds Length = 1482 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 ttgatagttctggatatatt 463 |||||||||||||||||||| Sbjct: 329 ttgatagttctggatatatt 348
>gb|L31935.1|RIRBR47G Rickettsia tsutsugamushi (strain Br47) gene, complete cds Length = 1500 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 ttgatagttctggatatatt 463 |||||||||||||||||||| Sbjct: 329 ttgatagttctggatatatt 348
>gb|AC171726.1| Lycopersicon esculentum chromosome 01 clone C01HBa0088L02, complete sequence Length = 120525 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tgatagttctggatatattt 464 |||||||||||||||||||| Sbjct: 37080 tgatagttctggatatattt 37061
>gb|L11697.1|RIR47KDA Rickettsia tsutsugamushi (clone Pkt5) 47 kDa protein gene, complete cds Length = 2228 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 ttgatagttctggatatatt 463 |||||||||||||||||||| Sbjct: 629 ttgatagttctggatatatt 648 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,770,476 Number of Sequences: 3902068 Number of extensions: 4770476 Number of successful extensions: 86323 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86092 Number of HSP's gapped (non-prelim): 231 length of query: 540 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 517 effective length of database: 17,143,297,704 effective search space: 8863084912968 effective search space used: 8863084912968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)