Clone Name | baak4h23 |
---|---|
Clone Library Name | barley_pub |
>gb|CP000013.1| Borrelia garinii PBi, complete genome Length = 904246 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tttataagtttttattaga 50 ||||||||||||||||||| Sbjct: 561869 tttataagtttttattaga 561887
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 agttcgaggtgttttgatc 110 ||||||||||||||||||| Sbjct: 964364 agttcgaggtgttttgatc 964382
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gcccgcatcgtcgccgtac 19 ||||||||||||||||||| Sbjct: 57894 gcccgcatcgtcgccgtac 57912
>gb|AC146394.3| Pan troglodytes BAC clone RP43-55L17 from 7, complete sequence Length = 157809 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 tttattagatctgttactt 60 ||||||||||||||||||| Sbjct: 145458 tttattagatctgttactt 145476
>emb|BX510935.28| Zebrafish DNA sequence from clone DKEY-207L24 in linkage group 14, complete sequence Length = 128666 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 atgctttataagtttttat 46 ||||||||||||||||||| Sbjct: 73496 atgctttataagtttttat 73478
>gb|AC091650.4| Homo sapiens BAC clone RP13-496E15 from 7, complete sequence Length = 45819 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 tttattagatctgttactt 60 ||||||||||||||||||| Sbjct: 31600 tttattagatctgttactt 31582
>gb|AC145768.1| Pan troglodytes BAC clone RP43-5G4 from 7, complete sequence Length = 154325 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 tttattagatctgttactt 60 ||||||||||||||||||| Sbjct: 116495 tttattagatctgttactt 116477
>gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic monensin biosynthesis gene cluster, partial sequence Length = 103450 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gcccgcatcgtcgccgtac 19 ||||||||||||||||||| Sbjct: 44548 gcccgcatcgtcgccgtac 44566
>emb|AL662903.10| Mouse DNA sequence from clone RP23-419P16 on chromosome 11 Contain the gene for olfactory receptor MOR278-1, an olfactory receptor pseudogene, three novel genes, the gene for olfactory receptor MOR222-2, an olfactory receptor pseudogene (MOR222-4P), the gene for olfactory receptor MOR222-1, part of a novel gene, a novel gene (2810021J22Rik) and a novel zinc finger gene, complete sequence Length = 146349 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 116 atggtggacatgatctgtt 134 ||||||||||||||||||| Sbjct: 125862 atggtggacatgatctgtt 125844
>emb|AJ437001.1|PPU437001 Pseudomonas putida phnR gene, phnW gene and phnX gene Length = 2962 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 124 catgatctgtttatccaac 142 ||||||||||||||||||| Sbjct: 298 catgatctgtttatccaac 316
>emb|BX901980.12| Zebrafish DNA sequence from clone CH211-258F1 in linkage group 22, complete sequence Length = 163109 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 atgctttataagtttttat 46 ||||||||||||||||||| Sbjct: 151567 atgctttataagtttttat 151585
>gb|AC008618.7| Homo sapiens chromosome 5 clone CTB-146E17, complete sequence Length = 139029 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ttattagatctgttacttg 61 ||||||||||||||||||| Sbjct: 66642 ttattagatctgttacttg 66624
>gb|AC092458.5| Homo sapiens BAC clone RP13-612N21 from 4, complete sequence Length = 126619 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 131 tgtttatccaaccgttaat 149 ||||||||||||||||||| Sbjct: 9789 tgtttatccaaccgttaat 9807
>gb|AC008565.6|AC008565 Homo sapiens chromosome 5 clone CTC-538F12, complete sequence Length = 167086 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ttattagatctgttacttg 61 ||||||||||||||||||| Sbjct: 56632 ttattagatctgttacttg 56650
>gb|AE016753.1| Mus musculus chromosome 10 high-growth region, section 1 of 2 of the complete sequence Length = 350029 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 tattttgaactcagctctt 90 ||||||||||||||||||| Sbjct: 266086 tattttgaactcagctctt 266104
>emb|AL954387.17| Zebrafish DNA sequence from clone CH211-288B20 in linkage group 18, complete sequence Length = 125744 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 ctttataagtttttattag 49 ||||||||||||||||||| Sbjct: 113899 ctttataagtttttattag 113881
>dbj|BS000218.1| Pan troglodytes chromosome 22 clone:PTB-414O06, map 22, complete sequences Length = 92059 Score = 38.2 bits (19), Expect = 9.2 Identities = 25/27 (92%) Strand = Plus / Minus Query: 37 aagtttttattagatctgttacttgtg 63 ||||| |||||||| |||||||||||| Sbjct: 2357 aagttgttattagacctgttacttgtg 2331
>gb|AC153366.7| Mus musculus 10 BAC RP23-243B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184707 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 tattttgaactcagctctt 90 ||||||||||||||||||| Sbjct: 61801 tattttgaactcagctctt 61783
>emb|AL805930.16| Mouse DNA sequence from clone RP23-455B8 on chromosome 4, complete sequence Length = 174746 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 ataagtttttattagatct 53 ||||||||||||||||||| Sbjct: 59762 ataagtttttattagatct 59780 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,448,806 Number of Sequences: 3902068 Number of extensions: 1448806 Number of successful extensions: 107582 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107520 Number of HSP's gapped (non-prelim): 62 length of query: 186 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 164 effective length of database: 17,147,199,772 effective search space: 2812140762608 effective search space used: 2812140762608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)