Clone Name | baak4i16 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK060099.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H01, full insert sequence Length = 957 Score = 389 bits (196), Expect = e-105 Identities = 331/376 (88%) Strand = Plus / Plus Query: 103 cgcaggcaatcgaggctcagagggagggcgcggaggtgtaccacggcgcggcgctgtgcg 162 ||||||| || ||||| || |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 98 cgcaggcgatagaggcgcacagggagggggcggaggtgtaccacggggcggcgctgtgcg 157 Query: 163 cggagaaggcggtggagctgctggccgagaccaacttgccgctgggcctgctgccgctgg 222 ||||||||||||||||||| || || |||| | || |||||||||||||||||||||||| Sbjct: 158 cggagaaggcggtggagctcctcgcggagatccacatgccgctgggcctgctgccgctgg 217 Query: 223 ccgacatcgaggaggtgggttacaaccgcgccaccggcttcgtctggcttcgccagaaga 282 | || || |||||||| || |||||||||||||| || ||||| ||||| |||||||||| Sbjct: 218 cggagatggaggaggtcggctacaaccgcgccacggggttcgtgtggctgcgccagaaga 277 Query: 283 aggcgctcacgcacaccttcaagcagatcgggaggcaggtctcgtacgccaccgaggtga 342 |||| |||| |||||||||||||||||| | ||||||||||||| |||| ||||||| | Sbjct: 278 aggccatcacccacaccttcaagcagatcagcaggcaggtctcgttcgccgccgaggtca 337 Query: 343 cggccttcgtcgaggaccgcaagatgaagcgcatgaccggggtcaagagcaaggaactcc 402 | |||||||||||||||||| |||||||||| | ||||||| ||||| |||||| |||| Sbjct: 338 ccgccttcgtcgaggaccgccggatgaagcgcgtcaccggggccaagaccaaggagctcc 397 Query: 403 tcatctggatcaccctctgtgatatgtacatcgacaaggatgacccctccaagatcacct 462 |||||||| || |||||| || |||| |||||||||||| ||||||||||||||||||| Sbjct: 398 tcatctgggtctccctctccgacatgttcatcgacaaggacgacccctccaagatcacct 457 Query: 463 tcaagacgcccaccgg 478 ||||||| |||||||| Sbjct: 458 tcaagacccccaccgg 473
>ref|NM_188391.1| Oryza sativa (japonica cultivar-group), Ozsa8117 predicted mRNA Length = 504 Score = 381 bits (192), Expect = e-102 Identities = 330/376 (87%) Strand = Plus / Plus Query: 103 cgcaggcaatcgaggctcagagggagggcgcggaggtgtaccacggcgcggcgctgtgcg 162 ||||||| || ||||| || |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 8 cgcaggcgatagaggcgcacagggagggggcggaggtgtaccacggggcggcgctgtgcg 67 Query: 163 cggagaaggcggtggagctgctggccgagaccaacttgccgctgggcctgctgccgctgg 222 ||||||||||||||||||| || || |||| | || |||||||||||||||||||||||| Sbjct: 68 cggagaaggcggtggagctcctcgcggagatccacatgccgctgggcctgctgccgctgg 127 Query: 223 ccgacatcgaggaggtgggttacaaccgcgccaccggcttcgtctggcttcgccagaaga 282 | || || |||||||| || |||||||||||||| || ||||| ||||| |||||||||| Sbjct: 128 cggagatggaggaggtcggctacaaccgcgccacggggttcgtgtggctgcgccagaaga 187 Query: 283 aggcgctcacgcacaccttcaagcagatcgggaggcaggtctcgtacgccaccgaggtga 342 |||| |||| |||||||||||||||||| | ||||||||||||| |||| ||||||| | Sbjct: 188 aggccatcacccacaccttcaagcagatcagcaggcaggtctcgttcgccgccgaggtca 247 Query: 343 cggccttcgtcgaggaccgcaagatgaagcgcatgaccggggtcaagagcaaggaactcc 402 | |||||||||||||||||| |||||||||| | ||||||| ||||| |||||| |||| Sbjct: 248 ccgccttcgtcgaggaccgccggatgaagcgcgtcaccggggccaagaccaaggagctcc 307 Query: 403 tcatctggatcaccctctgtgatatgtacatcgacaaggatgacccctccaagatcacct 462 |||||||| || |||||| || |||| |||||||||||| ||| ||||||||||||||| Sbjct: 308 tcatctgggtctccctctccgacatgttcatcgacaaggacgacgcctccaagatcacct 367 Query: 463 tcaagacgcccaccgg 478 ||||||| |||||||| Sbjct: 368 tcaagacccccaccgg 383
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 381 bits (192), Expect = e-102 Identities = 330/376 (87%) Strand = Plus / Minus Query: 103 cgcaggcaatcgaggctcagagggagggcgcggaggtgtaccacggcgcggcgctgtgcg 162 ||||||| || ||||| || |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 6010721 cgcaggcgatagaggcgcacagggagggggcggaggtgtaccacggggcggcgctgtgcg 6010662 Query: 163 cggagaaggcggtggagctgctggccgagaccaacttgccgctgggcctgctgccgctgg 222 ||||||||||||||||||| || || |||| | || |||||||||||||||||||||||| Sbjct: 6010661 cggagaaggcggtggagctcctcgcggagatccacatgccgctgggcctgctgccgctgg 6010602 Query: 223 ccgacatcgaggaggtgggttacaaccgcgccaccggcttcgtctggcttcgccagaaga 282 | || || |||||||| || |||||||||||||| || ||||| ||||| |||||||||| Sbjct: 6010601 cggagatggaggaggtcggctacaaccgcgccacggggttcgtgtggctgcgccagaaga 6010542 Query: 283 aggcgctcacgcacaccttcaagcagatcgggaggcaggtctcgtacgccaccgaggtga 342 |||| |||| |||||||||||||||||| | ||||||||||||| |||| ||||||| | Sbjct: 6010541 aggccatcacccacaccttcaagcagatcagcaggcaggtctcgttcgccgccgaggtca 6010482 Query: 343 cggccttcgtcgaggaccgcaagatgaagcgcatgaccggggtcaagagcaaggaactcc 402 | |||||||||||||||||| |||||||||| | ||||||| ||||| |||||| |||| Sbjct: 6010481 ccgccttcgtcgaggaccgccggatgaagcgcgtcaccggggccaagaccaaggagctcc 6010422 Query: 403 tcatctggatcaccctctgtgatatgtacatcgacaaggatgacccctccaagatcacct 462 |||||||| || |||||| || |||| |||||||||||| ||| ||||||||||||||| Sbjct: 6010421 tcatctgggtctccctctccgacatgttcatcgacaaggacgacgcctccaagatcacct 6010362 Query: 463 tcaagacgcccaccgg 478 ||||||| |||||||| Sbjct: 6010361 tcaagacccccaccgg 6010346 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 18685518 tacttggggagatttgattcattca 18685542 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 33582680 tacttggggagatttgattcattc 33582657
>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466B10 Length = 151806 Score = 381 bits (192), Expect = e-102 Identities = 330/376 (87%) Strand = Plus / Minus Query: 103 cgcaggcaatcgaggctcagagggagggcgcggaggtgtaccacggcgcggcgctgtgcg 162 ||||||| || ||||| || |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 78609 cgcaggcgatagaggcgcacagggagggggcggaggtgtaccacggggcggcgctgtgcg 78550 Query: 163 cggagaaggcggtggagctgctggccgagaccaacttgccgctgggcctgctgccgctgg 222 ||||||||||||||||||| || || |||| | || |||||||||||||||||||||||| Sbjct: 78549 cggagaaggcggtggagctcctcgcggagatccacatgccgctgggcctgctgccgctgg 78490 Query: 223 ccgacatcgaggaggtgggttacaaccgcgccaccggcttcgtctggcttcgccagaaga 282 | || || |||||||| || |||||||||||||| || ||||| ||||| |||||||||| Sbjct: 78489 cggagatggaggaggtcggctacaaccgcgccacggggttcgtgtggctgcgccagaaga 78430 Query: 283 aggcgctcacgcacaccttcaagcagatcgggaggcaggtctcgtacgccaccgaggtga 342 |||| |||| |||||||||||||||||| | ||||||||||||| |||| ||||||| | Sbjct: 78429 aggccatcacccacaccttcaagcagatcagcaggcaggtctcgttcgccgccgaggtca 78370 Query: 343 cggccttcgtcgaggaccgcaagatgaagcgcatgaccggggtcaagagcaaggaactcc 402 | |||||||||||||||||| |||||||||| | ||||||| ||||| |||||| |||| Sbjct: 78369 ccgccttcgtcgaggaccgccggatgaagcgcgtcaccggggccaagaccaaggagctcc 78310 Query: 403 tcatctggatcaccctctgtgatatgtacatcgacaaggatgacccctccaagatcacct 462 |||||||| || |||||| || |||| |||||||||||| ||| ||||||||||||||| Sbjct: 78309 tcatctgggtctccctctccgacatgttcatcgacaaggacgacgcctccaagatcacct 78250 Query: 463 tcaagacgcccaccgg 478 ||||||| |||||||| Sbjct: 78249 tcaagacccccaccgg 78234
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 381 bits (192), Expect = e-102 Identities = 330/376 (87%) Strand = Plus / Minus Query: 103 cgcaggcaatcgaggctcagagggagggcgcggaggtgtaccacggcgcggcgctgtgcg 162 ||||||| || ||||| || |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 35078 cgcaggcgatagaggcgcacagggagggggcggaggtgtaccacggggcggcgctgtgcg 35019 Query: 163 cggagaaggcggtggagctgctggccgagaccaacttgccgctgggcctgctgccgctgg 222 ||||||||||||||||||| || || |||| | || |||||||||||||||||||||||| Sbjct: 35018 cggagaaggcggtggagctcctcgcggagatccacatgccgctgggcctgctgccgctgg 34959 Query: 223 ccgacatcgaggaggtgggttacaaccgcgccaccggcttcgtctggcttcgccagaaga 282 | || || |||||||| || |||||||||||||| || ||||| ||||| |||||||||| Sbjct: 34958 cggagatggaggaggtcggctacaaccgcgccacggggttcgtgtggctgcgccagaaga 34899 Query: 283 aggcgctcacgcacaccttcaagcagatcgggaggcaggtctcgtacgccaccgaggtga 342 |||| |||| |||||||||||||||||| | ||||||||||||| |||| ||||||| | Sbjct: 34898 aggccatcacccacaccttcaagcagatcagcaggcaggtctcgttcgccgccgaggtca 34839 Query: 343 cggccttcgtcgaggaccgcaagatgaagcgcatgaccggggtcaagagcaaggaactcc 402 | |||||||||||||||||| |||||||||| | ||||||| ||||| |||||| |||| Sbjct: 34838 ccgccttcgtcgaggaccgccggatgaagcgcgtcaccggggccaagaccaaggagctcc 34779 Query: 403 tcatctggatcaccctctgtgatatgtacatcgacaaggatgacccctccaagatcacct 462 |||||||| || |||||| || |||| |||||||||||| ||| ||||||||||||||| Sbjct: 34778 tcatctgggtctccctctccgacatgttcatcgacaaggacgacgcctccaagatcacct 34719 Query: 463 tcaagacgcccaccgg 478 ||||||| |||||||| Sbjct: 34718 tcaagacccccaccgg 34703
>dbj|AK119774.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-F06, full insert sequence Length = 787 Score = 381 bits (192), Expect = e-102 Identities = 330/376 (87%) Strand = Plus / Plus Query: 103 cgcaggcaatcgaggctcagagggagggcgcggaggtgtaccacggcgcggcgctgtgcg 162 ||||||| || ||||| || |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 100 cgcaggcgatagaggcgcacagggagggggcggaggtgtaccacggggcggcgctgtgcg 159 Query: 163 cggagaaggcggtggagctgctggccgagaccaacttgccgctgggcctgctgccgctgg 222 ||||||||||||||||||| || || |||| | || |||||||||||||||||||||||| Sbjct: 160 cggagaaggcggtggagctcctcgcggagatccacatgccgctgggcctgctgccgctgg 219 Query: 223 ccgacatcgaggaggtgggttacaaccgcgccaccggcttcgtctggcttcgccagaaga 282 | || || |||||||| || |||||||||||||| || ||||| ||||| |||||||||| Sbjct: 220 cggagatggaggaggtcggctacaaccgcgccacggggttcgtgtggctgcgccagaaga 279 Query: 283 aggcgctcacgcacaccttcaagcagatcgggaggcaggtctcgtacgccaccgaggtga 342 |||| |||| |||||||||||||||||| | ||||||||||||| |||| ||||||| | Sbjct: 280 aggccatcacccacaccttcaagcagatcagcaggcaggtctcgttcgccgccgaggtca 339 Query: 343 cggccttcgtcgaggaccgcaagatgaagcgcatgaccggggtcaagagcaaggaactcc 402 | |||||||||||||||||| |||||||||| | ||||||| ||||| |||||| |||| Sbjct: 340 ccgccttcgtcgaggaccgccggatgaagcgcgtcaccggggccaagaccaaggagctcc 399 Query: 403 tcatctggatcaccctctgtgatatgtacatcgacaaggatgacccctccaagatcacct 462 |||||||| || |||||| || |||| |||||||||||| ||| ||||||||||||||| Sbjct: 400 tcatctgggtctccctctccgacatgttcatcgacaaggacgacgcctccaagatcacct 459 Query: 463 tcaagacgcccaccgg 478 ||||||| |||||||| Sbjct: 460 tcaagacccccaccgg 475
>gb|AY110901.1| Zea mays CL7341_1 mRNA sequence Length = 746 Score = 283 bits (143), Expect = 3e-73 Identities = 266/307 (86%) Strand = Plus / Plus Query: 176 ggagctgctggccgagaccaacttgccgctgggcctgctgccgctggccgacatcgagga 235 |||||||||||| ||| | || | ||||||||||||||| ||||||||||||| ||||| Sbjct: 112 ggagctgctggcagaggcgcacctcccgctgggcctgctgtcgctggccgacatggagga 171 Query: 236 ggtgggttacaaccgcgccaccggcttcgtctggcttcgccagaagaaggcgctcacgca 295 ||| || |||||||||||||| |||||||| ||||| ||||||| |||| |||||||||| Sbjct: 172 ggtcggctacaaccgcgccacgggcttcgtgtggctgcgccagaggaagtcgctcacgca 231 Query: 296 caccttcaagcagatcgggaggcaggtctcgtacgccaccgaggtgacggccttcgtcga 355 ||| ||| | ||||| | | ||||||||||||||| ||||||| || |||||||| || Sbjct: 232 cacgttccgcccgatcgcgcgccaggtctcgtacgccgccgaggtcaccgccttcgtgga 291 Query: 356 ggaccgcaagatgaagcgcatgaccggggtcaagagcaaggaactcctcatctggatcac 415 |||||| ||||| |||||||||||||||||||| |||||| |||||||||||| |||| Sbjct: 292 ggaccggcggatgaggcgcatgaccggggtcaagaccaaggagctcctcatctgggtcac 351 Query: 416 cctctgtgatatgtacatcgacaaggatgacccctccaagatcaccttcaagacgcccac 475 ||||| || |||| | |||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 352 cctctccgacatgttcgtcgacagggacgacccctccaagatcaccttcaagacgcccac 411 Query: 476 cgggctc 482 ||||||| Sbjct: 412 cgggctc 418
>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017H17, complete sequence Length = 156331 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 321 gtctcgtacgccaccgaggtgacggccttcgtcga 355 ||||| |||||||||||||||||||| |||||||| Sbjct: 8606 gtctcctacgccaccgaggtgacggcgttcgtcga 8640 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 321 gtctcgtacgccaccgaggtgacggccttcgtcga 355 ||||| || ||||||||||||||||| |||||||| Sbjct: 6830 gtctcctatgccaccgaggtgacggcattcgtcga 6864
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 321 gtctcgtacgccaccgaggtgacggccttcgtcga 355 ||||| |||||||||||||||||||| |||||||| Sbjct: 149816 gtctcctacgccaccgaggtgacggcgttcgtcga 149850 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 321 gtctcgtacgccaccgaggtgacggccttcgtcga 355 ||||| || ||||||||||||||||| |||||||| Sbjct: 148040 gtctcctatgccaccgaggtgacggcattcgtcga 148074
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 321 gtctcgtacgccaccgaggtgacggccttcgtcga 355 ||||| |||||||||||||||||||| |||||||| Sbjct: 21797763 gtctcctacgccaccgaggtgacggcgttcgtcga 21797797 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 321 gtctcgtacgccaccgaggtgacggccttcgtcga 355 ||||| || ||||||||||||||||| |||||||| Sbjct: 21795987 gtctcctatgccaccgaggtgacggcattcgtcga 21796021
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 321 gtctcgtacgccaccgaggtgacggccttcgtcga 355 ||||| |||||||||||||||||||| |||||||| Sbjct: 22107962 gtctcctacgccaccgaggtgacggcgttcgtcga 22107996 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 321 gtctcgtacgccaccgaggtgacggccttcgtcga 355 ||||| || ||||||||||||||||| |||||||| Sbjct: 22106186 gtctcctatgccaccgaggtgacggcattcgtcga 22106220
>gb|AC090053.5| Leishmania major strain Friedlin chromosome Unknown clone P323, complete sequence Length = 66637 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 204 ctgggcctgctgccgctggccgacatcgagg 234 ||||||||||||||||||||||| ||||||| Sbjct: 11302 ctgggcctgctgccgctggccgagatcgagg 11332
>gb|BT009174.1| Triticum aestivum clone wl1n.pk0107.h1:fis, full insert mRNA sequence Length = 862 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 379 ccggggtcaagagcaaggaactcctcatctggatcacc 416 ||||||| ||||||||||| |||||||||||| ||||| Sbjct: 371 ccggggtgaagagcaaggagctcctcatctgggtcacc 408
>gb|AY105303.1| Zea mays PCO075489 mRNA sequence Length = 894 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 379 ccggggtcaagagcaaggaactcctcatctggatcacc 416 ||||||| ||||||||||| |||||||||||| ||||| Sbjct: 393 ccggggtgaagagcaaggagctcctcatctgggtcacc 430
>gb|AF466285.1| Oryza sativa susceptibility homeodomain transciption factor (HDTF) mRNA, partial cds Length = 580 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 379 ccggggtcaagagcaaggaactcctcatctgg 410 ||||||| ||||||||||| |||||||||||| Sbjct: 157 ccggggtgaagagcaaggagctcctcatctgg 188 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 231 gaggaggtgggttacaaccgcgccaccggcttcgtctggct 271 |||||||| || |||||||||||| |||| ||||| ||||| Sbjct: 3 gaggaggtcgggtacaaccgcgccgccgggttcgtgtggct 43
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 379 ccggggtcaagagcaaggaactcctcatctgg 410 ||||||| ||||||||||| |||||||||||| Sbjct: 19876508 ccggggtgaagagcaaggagctcctcatctgg 19876477 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 231 gaggaggtgggttacaaccgcgccaccggcttcgtctggct 271 |||||||| || |||||||||||| |||| ||||| ||||| Sbjct: 19876662 gaggaggtcgggtacaaccgcgccgccgggttcgtgtggct 19876622 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 caaggaactcctcatctgga 411 |||||||||||||||||||| Sbjct: 18733255 caaggaactcctcatctgga 18733274 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cggcgcggcgctgtgcgcgg 165 |||||||||||||||||||| Sbjct: 4373702 cggcgcggcgctgtgcgcgg 4373721
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0551A03 Length = 173027 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 379 ccggggtcaagagcaaggaactcctcatctgg 410 ||||||| ||||||||||| |||||||||||| Sbjct: 143553 ccggggtgaagagcaaggagctcctcatctgg 143522 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 231 gaggaggtgggttacaaccgcgccaccggcttcgtctggct 271 |||||||| || |||||||||||| |||| ||||| ||||| Sbjct: 143707 gaggaggtcgggtacaaccgcgccgccgggttcgtgtggct 143667
>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1018E06 Length = 178499 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 379 ccggggtcaagagcaaggaactcctcatctgg 410 ||||||| ||||||||||| |||||||||||| Sbjct: 14848 ccggggtgaagagcaaggagctcctcatctgg 14817 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 231 gaggaggtgggttacaaccgcgccaccggcttcgtctggct 271 |||||||| || |||||||||||| |||| ||||| ||||| Sbjct: 15002 gaggaggtcgggtacaaccgcgccgccgggttcgtgtggct 14962
>dbj|AK122046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114A14, full insert sequence Length = 779 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 379 ccggggtcaagagcaaggaactcctcatctgg 410 ||||||| ||||||||||| |||||||||||| Sbjct: 367 ccggggtgaagagcaaggagctcctcatctgg 398 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 231 gaggaggtgggttacaaccgcgccaccggcttcgtctggct 271 |||||||| || |||||||||||| |||| ||||| ||||| Sbjct: 213 gaggaggtcgggtacaaccgcgccgccgggttcgtgtggct 253
>dbj|AK063825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-A08, full insert sequence Length = 784 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 379 ccggggtcaagagcaaggaactcctcatctgg 410 ||||||| ||||||||||| |||||||||||| Sbjct: 361 ccggggtgaagagcaaggagctcctcatctgg 392 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 231 gaggaggtgggttacaaccgcgccaccggcttcgtctggct 271 |||||||| || |||||||||||| |||| ||||| ||||| Sbjct: 207 gaggaggtcgggtacaaccgcgccgccgggttcgtgtggct 247
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 200 gccgctgggcctgctgccgctggccga 226 |||||||||||||||| |||||||||| Sbjct: 1331042 gccgctgggcctgctggcgctggccga 1331068 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 167 gaaggcggtggagctgctggccgag 191 |||||||||||||||| |||||||| Sbjct: 3988259 gaaggcggtggagctggtggccgag 3988283 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 gccgctgggcctgctgccgctggcc 224 |||||||||||||||| |||||||| Sbjct: 167907 gccgctgggcctgctggcgctggcc 167931 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 tgggcctgctgccgctggcc 224 |||||||||||||||||||| Sbjct: 2641006 tgggcctgctgccgctggcc 2640987
>gb|AC163616.3| Mus musculus BAC clone RP23-114P22 from chromosome 3, complete sequence Length = 212857 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 ttgaatctgagtttacttggag 72 |||||||||||||||||||||| Sbjct: 59001 ttgaatctgagtttacttggag 58980
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 378 accggggtcaagagcaaggaactcctcatctggatcaccctc 419 ||||| |||||| |||||| |||||||||||| |||||||| Sbjct: 23149506 accggcgtcaaggccaaggagctcctcatctgggtcaccctc 23149547 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 20569251 tacttggggagatttgattcattca 20569275 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 5631820 tacttggggagatttgattcattc 5631843 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 5615193 tacttggggagatttgattcattc 5615170
>dbj|AK109434.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G11, full insert sequence Length = 960 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 378 accggggtcaagagcaaggaactcctcatctggatcaccctc 419 ||||| |||||| |||||| |||||||||||| |||||||| Sbjct: 373 accggcgtcaaggccaaggagctcctcatctgggtcaccctc 414
>dbj|AK105895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E12, full insert sequence Length = 1044 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 378 accggggtcaagagcaaggaactcctcatctggatcaccctc 419 ||||| |||||| |||||| |||||||||||| |||||||| Sbjct: 368 accggcgtcaaggccaaggagctcctcatctgggtcaccctc 409
>dbj|AK069514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020B07, full insert sequence Length = 1046 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 378 accggggtcaagagcaaggaactcctcatctggatcaccctc 419 ||||| |||||| |||||| |||||||||||| |||||||| Sbjct: 374 accggcgtcaaggccaaggagctcctcatctgggtcaccctc 415
>dbj|AK060891.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C01, full insert sequence Length = 1001 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 378 accggggtcaagagcaaggaactcctcatctggatcaccctc 419 ||||| |||||| |||||| |||||||||||| |||||||| Sbjct: 375 accggcgtcaaggccaaggagctcctcatctgggtcaccctc 416
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 339 gtgacggccttcgtcgaggacc 360 |||||||||||||||||||||| Sbjct: 850680 gtgacggccttcgtcgaggacc 850659
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 cggtggagctgctggccgagac 193 |||||||||||||||||||||| Sbjct: 3950664 cggtggagctgctggccgagac 3950643
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 378 accggggtcaagagcaaggaactcctcatctggatcaccctc 419 ||||| |||||| |||||| |||||||||||| |||||||| Sbjct: 23077697 accggcgtcaaggccaaggagctcctcatctgggtcaccctc 23077738 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 20495465 tacttggggagatttgattcattca 20495489 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 5631809 tacttggggagatttgattcattc 5631832 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 5615182 tacttggggagatttgattcattc 5615159
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Minus Query: 378 accggggtcaagagcaaggaactcctcatctggatcaccctc 419 ||||| |||||| |||||| |||||||||||| |||||||| Sbjct: 28891 accggcgtcaaggccaaggagctcctcatctgggtcaccctc 28850
>ref|XM_509538.1| PREDICTED: Pan troglodytes LOC452434 (LOC452434), mRNA Length = 1776 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 aaaaggccccagcaactccag 41 ||||||||||||||||||||| Sbjct: 323 aaaaggccccagcaactccag 343
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 ctgccgctggccgacatcgag 233 ||||||||||||||||||||| Sbjct: 3153612 ctgccgctggccgacatcgag 3153592
>gb|AF061267.2| Pseudomonas stutzeri strain WM88 operon htx, complete sequence Length = 14979 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 ctgggcctgctgccgctggccgaca 228 |||||||||||||||||| |||||| Sbjct: 6018 ctgggcctgctgccgctgaccgaca 6042
>ref|XM_547195.2| PREDICTED: Canis familiaris similar to abnormal CHEmotaxis family member (che-11) (LOC490075), mRNA Length = 3111 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gagaaggcggtggagctgctg 185 ||||||||||||||||||||| Sbjct: 2068 gagaaggcggtggagctgctg 2088
>gb|AY358744.1| Homo sapiens clone DNA143514 LIN-7B (UNQ3116) mRNA, complete cds Length = 776 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gagaaggcggtggagctgctg 185 ||||||||||||||||||||| Sbjct: 504 gagaaggcggtggagctgctg 524
>gb|AY597276.1| Pseudomonas viridiflava strain RMX3.1b pathogenicity island PAI-Region-1, partial sequence Length = 16917 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 ggcgcaggcaatcgaggctca 121 ||||||||||||||||||||| Sbjct: 12519 ggcgcaggcaatcgaggctca 12539
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 66201 tacttggggagatttgattcattca 66177
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 65715 tacttggggagatttgattcattca 65691
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 65715 tacttggggagatttgattcattca 65691
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 aggcggtggagctgctggccg 189 ||||||||||||||||||||| Sbjct: 1175548 aggcggtggagctgctggccg 1175528
>gb|BC027618.2| Homo sapiens lin-7 homolog B (C. elegans), mRNA (cDNA clone MGC:27097 IMAGE:4830017), complete cds Length = 744 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gagaaggcggtggagctgctg 185 ||||||||||||||||||||| Sbjct: 478 gagaaggcggtggagctgctg 498
>emb|AL929442.9| Mouse DNA sequence from clone RP23-95M20 on chromosome 4, complete sequence Length = 176578 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 54 aatctgagtttacttggagagattt 78 ||||||||| ||||||||||||||| Sbjct: 12950 aatctgagtctacttggagagattt 12926
>dbj|AP004611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1005_B10 Length = 142680 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 72964 tacttggggagatttgattcattca 72988
>ref|NM_022165.2| Homo sapiens lin-7 homolog B (C. elegans) (LIN7B), mRNA Length = 755 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gagaaggcggtggagctgctg 185 ||||||||||||||||||||| Sbjct: 504 gagaaggcggtggagctgctg 524
>gb|AF311862.1| Homo sapiens Lin-7b mRNA, complete cds Length = 754 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gagaaggcggtggagctgctg 185 ||||||||||||||||||||| Sbjct: 482 gagaaggcggtggagctgctg 502
>gb|AC008687.5| Homo sapiens chromosome 19 clone CTB-60B18, complete sequence Length = 157633 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gagaaggcggtggagctgctg 185 ||||||||||||||||||||| Sbjct: 129184 gagaaggcggtggagctgctg 129204
>gb|AC117378.8| Homo sapiens 12 BAC RP11-112B10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110459 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 aaaaggccccagcaactccag 41 ||||||||||||||||||||| Sbjct: 55894 aaaaggccccagcaactccag 55874
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 gctgccgctggccgacatcga 232 ||||||||||||||||||||| Sbjct: 2316189 gctgccgctggccgacatcga 2316169 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 cgcggagaaggcggtggagctgct 184 |||||||||||||| ||||||||| Sbjct: 1589463 cgcggagaaggcgggggagctgct 1589486
>dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1249E06 Length = 126534 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 7035 tacttggggagatttgattcattca 7059
>dbj|AP003276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0516D04 Length = 140491 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 108791 tacttggggagatttgattcattca 108815
>emb|X15426.1|MITVTRNAA T.vulgare mitochnodrial transfer RNA-Asn (GUU) Length = 468 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 257 tacttggggagatttgattcattca 281
>gb|AY785777.1| Crithidia deanei paraflagellar rod protein (PFR1) mRNA, complete cds Length = 2081 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gagaaggcggtggagctgctg 185 ||||||||||||||||||||| Sbjct: 219 gagaaggcggtggagctgctg 239
>emb|AJ328525.1|HSA328525 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-CC22RS Length = 753 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 ttcgccagaagaaggcgctcacgca 295 |||||| |||||||||||||||||| Sbjct: 505 ttcgcctgaagaaggcgctcacgca 481
>gb|AY112303.1| Zea mays CL26549_1 mRNA sequence Length = 842 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 365 gatgaagcgcatgaccggggt 385 ||||||||||||||||||||| Sbjct: 444 gatgaagcgcatgaccggggt 424
>emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa0005K20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 143618 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 23982 tacttggggagatttgattcattca 23958
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 428695 tacttggggagatttgattcattca 428719
>emb|X15379.1|MITADN Wheat mitDNA for tRNA-Asp and tRNA-Asn Length = 1640 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 788 tacttggggagatttgattcattca 764
>emb|AJ012134.1|ASA012134 Avena sativa mitochondrial cp-like tRNA-Asn (GTT) gene Length = 171 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 114 tacttggggagatttgattcattca 138
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 65664 tacttggggagatttgattcattca 65640
>dbj|D13107.1|RICMT11 Oryza sativa (japonica cultivar-group) mitochondrial gene for tRNA-Asn, complete sequence, clone:pMTVSCT15 Length = 1092 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattca 88 ||||||| ||||||||||||||||| Sbjct: 469 tacttggggagatttgattcattca 445
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 130296 tacttggggagatttgattcattc 130273 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 42724 tacttggggagatttgattcattc 42747
>ref|NM_197599.1| Oryza sativa (japonica cultivar-group) mucin-like protein (OSJNBb0015I11.17), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 163 cggagaaggcggtggagctgctggccga 190 |||| |||||||||||||||||| |||| Sbjct: 404 cggacaaggcggtggagctgctgaccga 431
>ref|NM_197370.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0076F20.19), mRNA Length = 411 Score = 40.1 bits (20), Expect = 6.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 335 cgaggtgacggccttcgtcgaggaccgcaagatgaagcgcatgaccgg 382 |||||||||||| ||||| ||||| | | ||||||||| |||||||| Sbjct: 126 cgaggtgacggcgttcgtggaggaagggaggatgaagcggatgaccgg 173
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gtaccacggcgcggcgctgt 159 |||||||||||||||||||| Sbjct: 2397651 gtaccacggcgcggcgctgt 2397670
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 gctggccgacatcgaggagg 237 |||||||||||||||||||| Sbjct: 191411 gctggccgacatcgaggagg 191430
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 ctgctgccgctggccgacat 229 |||||||||||||||||||| Sbjct: 42872 ctgctgccgctggccgacat 42853
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ggccttcgtcgaggaccgca 363 |||||||||||||||||||| Sbjct: 891846 ggccttcgtcgaggaccgca 891827
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 115916 tacttggggagatttgattcattc 115939 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 99240 tacttggggagatttgattcattc 99217
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 115916 tacttggggagatttgattcattc 115939 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 99240 tacttggggagatttgattcattc 99217
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 115865 tacttggggagatttgattcattc 115888 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 99185 tacttggggagatttgattcattc 99162
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 414818 tacttggggagatttgattcattc 414795 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 327200 tacttggggagatttgattcattc 327223
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 387654 tacttggggagatttgattcattc 387677 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 168477 tacttggggagatttgattcattc 168454
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 31512950 tacttggggagatttgattcattc 31512927 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 13871936 tacttggggagatttgattcattc 13871959
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 423061 tacttggggagatttgattcattc 423038
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 79646 tacttggggagatttgattcattc 79669
>ref|XM_542174.1| PREDICTED: Canis familiaris similar to thromboxane A2 receptor isoform 2 (LOC485056), mRNA Length = 1032 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 cgctgggcctgctgccgctg 221 |||||||||||||||||||| Sbjct: 485 cgctgggcctgctgccgctg 504
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 caagagcaaggaactcctcatctg 409 |||||||||||||||| ||||||| Sbjct: 268645 caagagcaaggaactcgtcatctg 268622
>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12, from chromosome 3, complete sequence Length = 161676 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 139546 tacttggggagatttgattcattc 139523
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 131551 tacttggggagatttgattcattc 131574 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 110356 tacttggggagatttgattcattc 110333
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 136065 tacttggggagatttgattcattc 136088 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 113995 tacttggggagatttgattcattc 113972
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggcctgctgccgctggccga 226 |||||||||||||||||||| Sbjct: 21061 ggcctgctgccgctggccga 21080
>ref|XM_505045.1| Yarrowia lipolytica CLIB122, YALI0F05720g predicted mRNA Length = 366 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 acgccaccgaggtgacggcc 347 |||||||||||||||||||| Sbjct: 280 acgccaccgaggtgacggcc 261
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 cggccttcgtcgaggaccgcaaga 366 ||||||||||||||||| |||||| Sbjct: 503519 cggccttcgtcgaggactgcaaga 503496
>gb|AY956411.1| Stenotrophomonas maltophilia phosphomannose isomerase/GDP-mannose pyrophosphorylase (xanB), phosphomannomutase (xanA), electron transfer flavoprotein alpha subunit (etfA), electron transfer flavoprotein beta subunit (etfB), dTDP-glucose 4,6-dehydratase (rmlB), glucose-1-phosphate thymidyltransferase (rmlA), dTDP-dehydrorhamnose 3,5-epimerase (rmlC), dTDP-4-dehydrorhamnose reductase (rmlD), and 3-oxoadipate CoA-succinyl transferase alpha subunit (ipsI) genes, complete cds Length = 12467 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 cgctgggcctgctgccgctggccg 225 ||||||||||||||| |||||||| Sbjct: 68 cgctgggcctgctgctgctggccg 91
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 119661 tacttggggagatttgattcattc 119684 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 103076 tacttggggagatttgattcattc 103053
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 115892 tacttggggagatttgattcattc 115915 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 99226 tacttggggagatttgattcattc 99203
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ggccttcgtcgaggaccgca 363 |||||||||||||||||||| Sbjct: 207664 ggccttcgtcgaggaccgca 207645
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 cgctgggcctgctgccgctg 221 |||||||||||||||||||| Sbjct: 139250 cgctgggcctgctgccgctg 139269
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 126281 tacttggggagatttgattcattc 126258 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 18007 tacttggggagatttgattcattc 17984
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ggccttcgtcgaggaccgca 363 |||||||||||||||||||| Sbjct: 225767 ggccttcgtcgaggaccgca 225748
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 154 cgctgtgcgcggagaaggcggtggagctgctg 185 ||||| || ||||| ||||||||||||||||| Sbjct: 65229 cgctgggcacggaggaggcggtggagctgctg 65260
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 tctcgtacgccaccgaggtg 341 |||||||||||||||||||| Sbjct: 208979 tctcgtacgccaccgaggtg 208960
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 144815 tacttggggagatttgattcattc 144792
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 58267 tacttggggagatttgattcattc 58290
>emb|AJ535776.1|ZMA535776 Zea mays chloroplast 4.5S rRNA gene, 5S rRNA gene, tRNA-Arg gene, ORF23, tRNA-Asn gene, ORF63 and rps15 gene (partial), cultivar CM111 Length = 2941 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 1061 tacttggggagatttgattcattc 1038
>emb|AL672272.10| Mouse DNA sequence from clone RP23-47N2 on chromosome 4 Contains the Rgs3 gene for regulator of G-protein signaling 3, three novel genes and a CpG island, complete sequence Length = 184345 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 aatcgaggctcagagggagg 129 |||||||||||||||||||| Sbjct: 122093 aatcgaggctcagagggagg 122112
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 97411 tacttggggagatttgattcattc 97388
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 40874 tacttggggagatttgattcattc 40897 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 24243 tacttggggagatttgattcattc 24220
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 31475 tacttggggagatttgattcattc 31452
>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048D11, from chromosome 3, complete sequence Length = 158911 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 148464 tacttggggagatttgattcattc 148487
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ccttcgtcgaggaccgcaag 365 |||||||||||||||||||| Sbjct: 3456725 ccttcgtcgaggaccgcaag 3456706
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tgccgctgggcctgctgccg 218 |||||||||||||||||||| Sbjct: 900402 tgccgctgggcctgctgccg 900421
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 163 cggagaaggcggtggagctgctggccga 190 |||| |||||||||||||||||| |||| Sbjct: 107634 cggacaaggcggtggagctgctgaccga 107661
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 40.1 bits (20), Expect = 6.5 Identities = 41/48 (85%) Strand = Plus / Minus Query: 335 cgaggtgacggccttcgtcgaggaccgcaagatgaagcgcatgaccgg 382 |||||||||||| ||||| ||||| | | ||||||||| |||||||| Sbjct: 131731 cgaggtgacggcgttcgtggaggaagggaggatgaagcggatgaccgg 131684
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 cttgccgctgggcctgctgc 216 |||||||||||||||||||| Sbjct: 140245 cttgccgctgggcctgctgc 140264
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 23615586 tacttggggagatttgattcattc 23615609 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 9272167 tacttggggagatttgattcattc 9272144 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 9231667 tacttggggagatttgattcattc 9231644 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 9168255 tacttggggagatttgattcattc 9168232 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 9060081 tacttggggagatttgattcattc 9060058
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 163 cggagaaggcggtggagctgctggccga 190 |||| |||||||||||||||||| |||| Sbjct: 20706182 cggacaaggcggtggagctgctgaccga 20706209 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 19942154 tacttggggagatttgattcattc 19942131 Score = 40.1 bits (20), Expect = 6.5 Identities = 41/48 (85%) Strand = Plus / Minus Query: 335 cgaggtgacggccttcgtcgaggaccgcaagatgaagcgcatgaccgg 382 |||||||||||| ||||| ||||| | | ||||||||| |||||||| Sbjct: 19503865 cgaggtgacggcgttcgtggaggaagggaggatgaagcggatgaccgg 19503818 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 10391019 tacttggggagatttgattcattc 10390996
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 9238114 tacttggggagatttgattcattc 9238137
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 31603466 tacttggggagatttgattcattc 31603443 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 13866911 tacttggggagatttgattcattc 13866934
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 816801 tacttggggagatttgattcattc 816778
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 128681 tacttggggagatttgattcattc 128704 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 108083 tacttggggagatttgattcattc 108060
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 43889 tacttggggagatttgattcattc 43912
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 127877 tacttggggagatttgattcattc 127854
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cgcggagaaggcggtggagc 180 |||||||||||||||||||| Sbjct: 2715011 cgcggagaaggcggtggagc 2715030
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 119714 tacttggggagatttgattcattc 119737 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 103123 tacttggggagatttgattcattc 103100
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 49327 tacttggggagatttgattcattc 49350
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cggcgcggcgctgtgcgcgg 165 |||||||||||||||||||| Sbjct: 21383 cggcgcggcgctgtgcgcgg 21402
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 26009 tacttggggagatttgattcattc 25986
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 94932 tacttggggagatttgattcattc 94909
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 ctgctgccgctggccgacat 229 |||||||||||||||||||| Sbjct: 42734 ctgctgccgctggccgacat 42715
>dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0077L03 Length = 171177 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 caaggaactcctcatctgga 411 |||||||||||||||||||| Sbjct: 59006 caaggaactcctcatctgga 59025
>emb|Y12820.1|MTY12820 Mycobacterium tuberculosis cfp29 gene Length = 1100 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ggccttcgtcgaggaccgca 363 |||||||||||||||||||| Sbjct: 520 ggccttcgtcgaggaccgca 539
>emb|Y13470.1|MTY13470 Mycobacterium tuberculosis gene encoding mercuric reductase/glutathione reductase/dihydrolipoamide dehydrogenase and insertion element IS1547 Length = 3627 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ggccttcgtcgaggaccgca 363 |||||||||||||||||||| Sbjct: 3543 ggccttcgtcgaggaccgca 3524
>dbj|AK106264.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-F10, full insert sequence Length = 1488 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 163 cggagaaggcggtggagctgctggccga 190 |||| |||||||||||||||||| |||| Sbjct: 80 cggacaaggcggtggagctgctgaccga 107
>ref|NM_211429.1| Eremothecium gossypii AGL300Cp (AGL300C), mRNA Length = 2820 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cttgccgctgggcctgctgc 216 |||||||||||||||||||| Sbjct: 1258 cttgccgctgggcctgctgc 1239
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 123627 tacttggggagatttgattcattc 123650 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 111295 tacttggggagatttgattcattc 111272
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 131829 tacttggggagatttgattcattc 131852 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 110578 tacttggggagatttgattcattc 110555
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 163 cggagaaggcggtggagctgctggccga 190 |||| |||||||||||||||||| |||| Sbjct: 20717454 cggacaaggcggtggagctgctgaccga 20717481 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 19953430 tacttggggagatttgattcattc 19953407 Score = 40.1 bits (20), Expect = 6.5 Identities = 41/48 (85%) Strand = Plus / Minus Query: 335 cgaggtgacggccttcgtcgaggaccgcaagatgaagcgcatgaccgg 382 |||||||||||| ||||| ||||| | | ||||||||| |||||||| Sbjct: 19515141 cgaggtgacggcgttcgtggaggaagggaggatgaagcggatgaccgg 19515094 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 10397058 tacttggggagatttgattcattc 10397035
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 37692 tacttggggagatttgattcattc 37715 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 21065 tacttggggagatttgattcattc 21042
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 ctgctgccgctggccgacat 229 |||||||||||||||||||| Sbjct: 39135 ctgctgccgctggccgacat 39116
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 129626 tacttggggagatttgattcattc 129649 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 109023 tacttggggagatttgattcattc 109000
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 120431 tacttggggagatttgattcattc 120454 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 103800 tacttggggagatttgattcattc 103777
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 126299 tacttggggagatttgattcattc 126322 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 106157 tacttggggagatttgattcattc 106134
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 115859 tacttggggagatttgattcattc 115882 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 99180 tacttggggagatttgattcattc 99157
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 acgccaccgaggtgacggcc 347 |||||||||||||||||||| Sbjct: 850960 acgccaccgaggtgacggcc 850941
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 cgacaaggatgacccctcca 453 |||||||||||||||||||| Sbjct: 3107137 cgacaaggatgacccctcca 3107118
>dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT28L17, TM0153b, complete sequence Length = 92148 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 76733 tacttggggagatttgattcattc 76756
>gb|M16907.1|MZECPRN3 Maize Asn-tRNA gene Length = 382 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tacttggagagatttgattcattc 87 ||||||| |||||||||||||||| Sbjct: 147 tacttggggagatttgattcattc 124 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,296,428 Number of Sequences: 3902068 Number of extensions: 3296428 Number of successful extensions: 68653 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65628 Number of HSP's gapped (non-prelim): 3024 length of query: 484 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 462 effective length of database: 17,147,199,772 effective search space: 7922006294664 effective search space used: 7922006294664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)