Clone Information

BLAST Search Result

Clone Name	baak4i09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TAF4_HUMAN (O00268) Transcription initiation factor TFIID subuni...	35	0.20
2	CREA_EMENI (Q01981) DNA-binding protein creA (Carbon catabolite ...	35	0.20
3	YBJO_SHIFL (P0AAZ3) Inner membrane protein ybjO	33	0.57
4	YBJO_ECOLI (P0AAZ0) Inner membrane protein ybjO	33	0.57
5	YBJO_ECOL6 (P0AAZ1) Inner membrane protein ybjO	33	0.57
6	YBJO_ECO57 (P0AAZ2) Inner membrane protein ybjO	33	0.57
7	EXTN_DAUCA (P06599) Extensin precursor	33	0.57
8	CREA_ASPOR (Q9P889) DNA-binding protein creA (Carbon catabolite ...	33	0.74
9	CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit...	32	0.97
10	CREA_COCCA (Q9HFS2) DNA-binding protein creA (Carbon catabolite ...	32	0.97
11	AMEL_MONDO (Q28462) Amelogenin	32	0.97
12	BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B a...	32	0.97
13	VG65_ICHV1 (Q00106) Hypothetical gene 65 protein	32	1.3
14	PTN23_HUMAN (Q9H3S7) Tyrosine-protein phosphatase non-receptor t...	32	1.3
15	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	32	1.3
16	TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)	32	1.3
17	FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription fact...	32	1.3
18	3BP2_HUMAN (P78314) SH3 domain-binding protein 2 (3BP-2)	32	1.7
19	PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)	32	1.7
20	WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting ...	32	1.7
21	EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)	32	1.7
22	CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit...	31	2.2
23	CREA_ASPNG (Q05620) DNA-binding protein creA (Carbon catabolite ...	31	2.2
24	CREA_ASPAC (O94166) DNA-binding protein creA (Carbon catabolite ...	31	2.2
25	WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interactin...	31	2.2
26	VGLG_HHV2H (P13290) Glycoprotein G	31	2.2
27	IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2	31	2.8
28	APP1_SCHPO (Q9P7E8) Protein app1	30	3.7
29	WBP2_RAT (Q8R478) WW domain-binding protein 2 (WBP-2)	30	3.7
30	MILK1_MOUSE (Q8BGT6) Molecule interacting with Rab13 (MIRab13) (...	30	3.7
31	IRX5_MOUSE (Q9JKQ4) Iroquois-class homeodomain protein IRX-5 (Ir...	30	3.7
32	FTSK_SALTY (Q8ZQD5) DNA translocase ftsK	30	4.8
33	YM11_YEAST (P39523) Hypothetical 105.9 kDa protein in RPL15B-GCR...	30	4.8
34	UB7I1_MOUSE (P58283) E3 ubiquitin ligase TRIAD3 (EC 6.3.2.-) (Ub...	30	4.8
35	BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch...	30	4.8
36	MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.4...	30	4.8
37	KPC1_NEUCR (P87253) Protein kinase C-like (EC 2.7.11.13)	30	4.8
38	CRE1_NEUCR (O59958) DNA-binding protein cre-1 (Carbon catabolite...	30	4.8
39	RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology doma...	30	4.8
40	ICP34_HHV1D (P37318) Infected cell protein ICP34.5 (Neurovirulen...	30	4.8
41	HES1_RAT (Q04666) Transcription factor HES-1 (Hairy and enhancer...	30	4.8
42	CMGA_PIG (P04404) Chromogranin A precursor (CgA) [Contains: Panc...	30	4.8
43	ARGD_METKA (Q8TUZ5) Acetylornithine aminotransferase (EC 2.6.1.1...	30	4.8
44	SYN_DROME (Q24546) Synapsin [Contains: Synapsin-1 (Syn1) (Syn1-S...	30	6.3
45	MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p...	30	6.3
46	EFS_HUMAN (O43281) Embryonal Fyn-associated substrate (HEFS)	30	6.3
47	LRP6_MOUSE (O88572) Low-density lipoprotein receptor-related pro...	30	6.3
48	LRP6_HUMAN (O75581) Low-density lipoprotein receptor-related pro...	30	6.3
49	CREA_GIBFU (O94131) DNA-binding protein creA (Carbon catabolite ...	30	6.3
50	SKI2_YEAST (P35207) Antiviral helicase SKI2 (EC 3.6.1.-)	30	6.3
51	ESX1L_HUMAN (Q8N693) Extraembryonic, spermatogenesis, homeobox 1...	30	6.3
52	BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot...	30	6.3
53	WBP2_HUMAN (Q969T9) WW domain-binding protein 2 (WBP-2)	30	6.3
54	HUNB_DRODS (O46240) Protein hunchback (Fragments)	30	6.3
55	TATB_XANAC (Q8PEX3) Sec-independent protein translocase protein ...	30	6.3
56	LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 prote...	29	8.2
57	Y066_NPVOP (Q83949) Hypothetical 98.6 kDa protein (ORF71)	29	8.2
58	SRCA_HUMAN (Q86TD4) Sarcalumenin precursor	29	8.2
59	IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2	29	8.2
60	ICP34_HHV1N (P37319) Infected cell protein ICP34.5 (Neurovirulen...	29	8.2
61	ICP34_HHV1F (P08353) Infected cell protein ICP34.5 (Neurovirulen...	29	8.2
62	MUA1_XENLA (P10667) Integumentary mucin A.1 precursor (FIM-A.1) ...	29	8.2
63	GLYA_BLOPB (Q492D5) Serine hydroxymethyltransferase (EC 2.1.2.1)...	29	8.2
64	PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presy...	29	8.2
65	NR2E3_HUMAN (Q9Y5X4) Photoreceptor-specific nuclear receptor (Re...	29	8.2

>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 135 kDa subunit)
           (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130)
           (TAFII130)
          Length = 1085

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 23/68 (33%), Positives = 27/68 (39%)
 Frame = +1

Query: 208 PFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPS 387
           P P  + PG  +Q        APPAP +   P AP P   P AA P   P  P P  +  
Sbjct: 227 PLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPA-APAAAPP---PPPPAPATLAR 282

Query: 388 AYYHHLAP 411
              H   P
Sbjct: 283 PPGHPAGP 290

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>CREA_EMENI (Q01981) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 416

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 9/56 (16%)
 Frame = +1

Query: 271 APPAPESQHIPLAPEPRHVPLAA---GPHYMPSVPEPRHVPSAYY---HH---LAP 411
           AP +P   H  L+P P H PLA     P   P  P   H+PS  +   HH   LAP
Sbjct: 286 APSSPTFSHDSLSPTPDHTPLATPAHSPRLKPLSPSELHLPSIRHLSLHHTPALAP 341

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>YBJO_SHIFL (P0AAZ3) Inner membrane protein ybjO|
          Length = 162

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
 Frame = +2

Query: 281 HPSLNTFLLPQSLAM-FLLPQGLTICLLYQSLGMS------HQRITTIWLLHLMILTT-V 436
           H  LN   L Q  A+  ++ +GL + +++ +LG+       H+ + T W L L+ L++ V
Sbjct: 16  HARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSVQT-WSLTLVFLSSLV 74

Query: 437 LEWIQCMSALLPEHLQGITQRRWGSWLLVLT 529
           L +I+   A        +  RRW  WL +LT
Sbjct: 75  LVFIEIWCAF-----SLVKGRRWARWLYLLT 100

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>YBJO_ECOLI (P0AAZ0) Inner membrane protein ybjO|
          Length = 162

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
 Frame = +2

Query: 281 HPSLNTFLLPQSLAM-FLLPQGLTICLLYQSLGMS------HQRITTIWLLHLMILTT-V 436
           H  LN   L Q  A+  ++ +GL + +++ +LG+       H+ + T W L L+ L++ V
Sbjct: 16  HARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSVQT-WSLTLVFLSSLV 74

Query: 437 LEWIQCMSALLPEHLQGITQRRWGSWLLVLT 529
           L +I+   A        +  RRW  WL +LT
Sbjct: 75  LVFIEIWCAF-----SLVKGRRWARWLYLLT 100

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>YBJO_ECOL6 (P0AAZ1) Inner membrane protein ybjO|
          Length = 162

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
 Frame = +2

Query: 281 HPSLNTFLLPQSLAM-FLLPQGLTICLLYQSLGMS------HQRITTIWLLHLMILTT-V 436
           H  LN   L Q  A+  ++ +GL + +++ +LG+       H+ + T W L L+ L++ V
Sbjct: 16  HARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSVQT-WSLTLVFLSSLV 74

Query: 437 LEWIQCMSALLPEHLQGITQRRWGSWLLVLT 529
           L +I+   A        +  RRW  WL +LT
Sbjct: 75  LVFIEIWCAF-----SLVKGRRWARWLYLLT 100

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>YBJO_ECO57 (P0AAZ2) Inner membrane protein ybjO|
          Length = 162

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
 Frame = +2

Query: 281 HPSLNTFLLPQSLAM-FLLPQGLTICLLYQSLGMS------HQRITTIWLLHLMILTT-V 436
           H  LN   L Q  A+  ++ +GL + +++ +LG+       H+ + T W L L+ L++ V
Sbjct: 16  HARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSVQT-WSLTLVFLSSLV 74

Query: 437 LEWIQCMSALLPEHLQGITQRRWGSWLLVLT 529
           L +I+   A        +  RRW  WL +LT
Sbjct: 75  LVFIEIWCAF-----SLVKGRRWARWLYLLT 100

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>EXTN_DAUCA (P06599) Extensin precursor|
          Length = 306

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = +1

Query: 253 HIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSAYYHH 402
           H  Y+  PP          P P+H P     +   S P P+H P+  +H+
Sbjct: 128 HYKYKSPPPPTPVYKYKSPPPPKHSPAPEHHYKYKSPPPPKHFPAPEHHY 177



 Score = 33.1 bits (74), Expect = 0.57
 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
 Frame = +1

Query: 178 EDSYRATHFAPFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHY-M 354
           E + + T+ +P P E  P           + +PP P   H    P P+H P    P Y  
Sbjct: 29  ETTAKYTYSSPPPPEHSPPP--------PEHSPPPP--YHYESPPPPKHSPPPPTPVYKY 78

Query: 355 PSVPEPRHVPSAYYHHLAP 411
            S P P H P   YH  +P
Sbjct: 79  KSPPPPMHSPPPPYHFESP 97



 Score = 32.7 bits (73), Expect = 0.74
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
 Frame = +1

Query: 256 IYYQQAPPAPESQ-----HIPLAPEPRHVPLAAGPHY-MPSVPEPRHVPSAYYHH 402
           +Y  ++PP P        H    P P+H P    P Y   S P P+H P+  +H+
Sbjct: 75  VYKYKSPPPPMHSPPPPYHFESPPPPKHSPPPPTPVYKYKSPPPPKHSPAPVHHY 129

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>CREA_ASPOR (Q9P889) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 429

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
 Frame = +1

Query: 271 APPAPESQHIPLAPEPRHVPLAA---GPHYMPSVPEPRHVPSAYY---HH---LAPXXXX 423
           AP +P   H  L+P P H PLA     P   P      H+PS  +   HH   LAP    
Sbjct: 299 APSSPTFSHDSLSPTPDHTPLATPAHSPRLRPLGSSELHLPSIRHLSLHHTPALAP---- 354

Query: 424 XXXXXXVDPVHERVAARTPPRDYAAPLGELAARAD 528
                 ++P  E     +P + +   + ++ +R D
Sbjct: 355 ------MEPQPEGPNYYSPSQSHGPTISDIMSRPD 383

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>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 632

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 265 QQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSA 390
           QQ PPAP+ QH+P  P  + +P          +P P  +P+A
Sbjct: 242 QQNPPAPQPQHLPRRP-VKDIPPLMQTSIQGGIPAPGPIPAA 282

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>CREA_COCCA (Q9HFS2) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 430

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
 Frame = +1

Query: 271 APPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSAY-------YHHLAPXXXXXX 429
           APP+P   H   +P P H PLA   H       PR  P  +         HL+       
Sbjct: 296 APPSPTFSHDSCSPTPDHTPLATPAH------SPRLRPHGFSDLQLPHLRHLSLNQNFVP 349

Query: 430 XXXXVDPVHERVAARTPPRDYAAPLGELAARAD 528
               ++P  ER     P +     +G++ ++ +
Sbjct: 350 ALAPMEPSTEREQPYVPSQSSGLRIGDIISKPE 382

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>AMEL_MONDO (Q28462) Amelogenin|
          Length = 202

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 214 PTESRPGQFVQDDHIYYQQAP-PAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVP 384
           P+ S P Q     HI    A  PAP  Q  P+ P P   P+A   H+ P++P+P   P
Sbjct: 60  PSHSLPPQH----HIPIMAAQQPAPPQQ--PVMPVPGQHPMAPTQHHQPNLPQPGQQP 111

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>BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B antigen)|
          Length = 1164

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +1

Query: 268 QAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVP 384
           +AP AP     P  PE  HVP +      P +PEP   P
Sbjct: 882 KAPEAPRVPESPKTPEAPHVPESPKTPEAPKIPEPPKTP 920



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 268  QAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVP 384
            ++P  PE+ H+P +P+    P    P   P VP+   VP
Sbjct: 891  ESPKTPEAPHVPESPKTPEAPKIPEPPKTPDVPKLPDVP 929



 Score = 30.8 bits (68), Expect = 2.8
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +1

Query: 268 QAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSA 390
           +AP AP     P  PE  HVP +      P VPE    P A
Sbjct: 858 KAPEAPRVPESPKTPEAPHVPESPKAPEAPRVPESPKTPEA 898



 Score = 30.8 bits (68), Expect = 2.8
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +1

Query: 268 QAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSA 390
           QAP  P++   P  PE    P A      P  PE  HVP +
Sbjct: 840 QAPDTPQAPDTPHVPESPKAPEAPRVPESPKTPEAPHVPES 880



 Score = 29.6 bits (65), Expect = 6.3
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +1

Query: 268 QAPPAPESQHIP---LAPEPRHVPLAAGPHYMPSVPEPRHVPSA 390
           ++P  PE+ H+P    APE   VP +      P VPE    P A
Sbjct: 867 ESPKTPEAPHVPESPKAPEAPRVPESPKTPEAPHVPESPKTPEA 910



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = +1

Query: 268 QAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSA 390
           QAP  P     P APE   VP +      P VPE    P A
Sbjct: 846 QAPDTPHVPESPKAPEAPRVPESPKTPEAPHVPESPKAPEA 886



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 274 PPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSA 390
           P  P++   P AP+  HVP +      P VPE    P A
Sbjct: 836 PELPQAPDTPQAPDTPHVPESPKAPEAPRVPESPKTPEA 874

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>VG65_ICHV1 (Q00106) Hypothetical gene 65 protein|
          Length = 1434

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
 Frame = +1

Query: 214  PTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPE-PRHVPLAAGPHYMPSVPE--PRHVP 384
            P +  PG + + D +     P A E   +P  P+ PR +P AA  +  P +P   PR +P
Sbjct: 910  PLDLPPGAYEEPD-LPRDLPPGAYEEPDLP--PDLPRDLPPAA--YEEPDLPPDLPRDLP 964

Query: 385  SAYYHHLAPXXXXXXXXXXVDPVHERVAARTPPRDYAAPLGELA 516
             A Y   AP                 +   +PP   +AP GE A
Sbjct: 965  PAAYEEPAPRAESSEDSTGTTGADGSLPVVSPPEPMSAPGGEPA 1008

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>PTN23_HUMAN (Q9H3S7) Tyrosine-protein phosphatase non-receptor type 23 (EC|
           3.1.3.48) (His-domain-containing protein tyrosine
           phosphatase) (HD-PTP) (Protein tyrosine phosphatase
           TD14) (PTP-TD14)
          Length = 1636

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = +1

Query: 199 HF--APFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEP 372
           HF  +PFP+ + PG      H      PP   S      P     P A GPH MP  P P
Sbjct: 770 HFPPSPFPSSTGPGP-----HYLSGPLPPGTYS-----GPTQLIQPRAPGPHAMPVAPGP 819

Query: 373 RHVPSAYY 396
              P+  Y
Sbjct: 820 ALYPAPAY 827



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
 Frame = +1

Query: 205  APFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAG----PHYMPSVPEP 372
            +P+P   +PG   Q         PP P   H  L P P   PL A     P   P  P+P
Sbjct: 996  SPYPYAPQPGVLGQ---------PPPP--LHTQLYPGPAQDPLPAHSGALPFPSPGPPQP 1044

Query: 373  RHVPSAY 393
             H P AY
Sbjct: 1045 PHPPLAY 1051

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
 Frame = +1

Query: 196 THFAPFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVP--- 366
           T+  P P  S P          Y+Q+PP P +   PL   P + P    P Y P  P   
Sbjct: 367 TYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPAPPTYSP--PPPTYSPPPPTYA 424

Query: 367 EPRHVPSAY 393
           +P  +P  Y
Sbjct: 425 QPPPLPPTY 433



 Score = 30.0 bits (66), Expect = 4.8
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +1

Query: 271 APPAPESQHIPLA---PEPRHVPLAAGPHYMPSVPEPRH 378
           +PP P+ Q +P     P PR + L   PH  P  P P +
Sbjct: 489 SPPPPQVQPLPPTFSPPPPRRIHLPPPPHRQPRPPTPTY 527



 Score = 30.0 bits (66), Expect = 4.8
 Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 8/69 (11%)
 Frame = +1

Query: 202 FAPFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLA---AGPHYMPS---- 360
           ++P P    P  +      + Q  P  P   H P  P  RH P     A P + PS    
Sbjct: 192 YSPSPQVQPPPTYSPPPPTHVQPTPSPPSRGHQPQPPTHRHAPPTHRHAPPTHQPSPLRH 251

Query: 361 -VPEPRHVP 384
             P PR  P
Sbjct: 252 LPPSPRRQP 260



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +1

Query: 208 PFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPS 387
           P PT S P          Y Q PP P +      P P + P    P Y P  P+ + +P 
Sbjct: 444 PPPTYSPPPPTYSPPPPAYAQPPPPPPTYS---PPPPAYSPPPPSPIYSPPPPQVQPLPP 500

Query: 388 AY 393
            +
Sbjct: 501 TF 502

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>TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)|
          Length = 518

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 27/84 (32%), Positives = 28/84 (33%)
 Frame = +1

Query: 274 PPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSAYYHHLAPXXXXXXXXXXVDPV 453
           PP P    I L PE   VP        P   EP  VP+A                   P 
Sbjct: 370 PPPPFEYSIDLPPEGAEVPYVKNYEPPPPGSEPEPVPAAEGEAAPAAEGAAPPAEGAAPP 429

Query: 454 HERVAARTPPRDYAAPLGELAARA 525
            E      PP D AAP  E AA A
Sbjct: 430 AE---GAVPPADGAAPPAEGAAPA 450

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>FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription factor FKH-4)|
          Length = 428

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 23/95 (24%), Positives = 32/95 (33%)
 Frame = +1

Query: 61  GHLDERYGHEESRHQHEDRPHPLHVEDRRXXXXXXXXXXEDSYRATHFAPFPTESRPGQF 240
           GHL   + H  + H H    H  H                  +   H  P P    P   
Sbjct: 134 GHLHPHHPHH-AHHHHHHHHHAAH------------------HHHHHHPPQPPPPPPPHM 174

Query: 241 VQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGP 345
           V     ++QQ  PAP+  H+P  P  +  P +  P
Sbjct: 175 VP---YFHQQPAPAPQPPHLPSQPAQQPQPQSQPP 206

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>3BP2_HUMAN (P78314) SH3 domain-binding protein 2 (3BP-2)|
          Length = 561

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 27/120 (22%), Positives = 40/120 (33%)
 Frame = +1

Query: 16  WLYSXPSTVHQSALRGHLDERYGHEESRHQHEDRPHPLHVEDRRXXXXXXXXXXEDSYRA 195
           W +S  S   + +    L    GH      HE +  PL   D            E     
Sbjct: 108 WFFSASSEEERKSWMALLRREIGHF-----HEKKDLPLDTSDSSSDTDSFYGAVERPVDI 162

Query: 196 THFAPFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPR 375
           +  +P+PT++   +   +D  Y +   P P      L   P + P        P VP PR
Sbjct: 163 S-LSPYPTDNEDYEHDDEDDSYLEPDSPEPGRLEDALMHPPAYPP--------PPVPTPR 213

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>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
 Frame = +1

Query: 265 QQAPPAPESQHIPLAPEPRHVPLAAGP----HYMPSVPEP 372
           QQ PP P   +  + P P H PL  GP     +MP  P P
Sbjct: 328 QQQPPQPPMNNGQMGPPPLHSPLGNGPTGHGSHMPGGPIP 367

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>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = +1

Query: 190 RATHFAPFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPE 369
           RAT   PF + S PG+F      +    P  P ++  P  P+    P +  P   P    
Sbjct: 130 RATSAKPFSSPSGPGRFPAPSPGHRSGPPEPPRNRMPPPRPDVGSKPDSLPP---PVPNT 186

Query: 370 PRHVPSAYYHHLAP 411
           PR +PS+ ++  +P
Sbjct: 187 PRPIPSSLHNRGSP 200

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>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)|
          Length = 2414

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +1

Query: 244  QDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSAYYHHLAP 411
            Q  H+  QQ P +  +Q     P P   P +  PH   S P PR  P    HH++P
Sbjct: 2290 QSPHLQGQQIPNSLSNQVRSPQPVPSPRPQSQPPH---SSPSPRMQPQPSPHHVSP 2342

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>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 616

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +1

Query: 229 PGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSA 390
           PG     + +  QQ PPAP+ QH+   P     PL   P     +P P  +P+A
Sbjct: 219 PGLCPGPNVLLNQQNPPAPQPQHLARRPVKDIPPLMQTP-IQGGIPAPGPIPAA 271

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>CREA_ASPNG (Q05620) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 427

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 9/56 (16%)
 Frame = +1

Query: 271 APPAPESQHIPLAPEPRHVPLAA---GPHYMPSVPEPRHVPSAYY---HH---LAP 411
           AP +P   H  L+P P H PLA     P   P      H+PS  +   HH   LAP
Sbjct: 296 APSSPTFSHDSLSPTPDHTPLATPAHSPRLRPLGSSDLHLPSIRHLSLHHTPALAP 351

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>CREA_ASPAC (O94166) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 431

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
 Frame = +1

Query: 271 APPAPESQHIPLAPEPRHVPLAA---GPHYMPSVPEPRHVPSAYY---HH---LAPXXXX 423
           AP +P   H  L+P P H PLA     P   P      H+PS  +   HH   LAP    
Sbjct: 300 APSSPTFSHDLLSPTPDHTPLATPAHSPRLRPLGSSDLHLPSIRHLSLHHTPALAP---- 355

Query: 424 XXXXXXVDPVHERVAARTPPRDYAAPLGELAARAD 528
                 ++P  E  +  +P + +   + ++ ++ D
Sbjct: 356 ------MEPQPEGPSYYSPSQSHGPSITDIMSKPD 384

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>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 493

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 22/74 (29%), Positives = 32/74 (43%)
 Frame = +1

Query: 190 RATHFAPFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPE 369
           RAT   PF   S PG+F      +    P  P ++  P  P+    P +  P   P    
Sbjct: 135 RATSAKPFSPPSGPGRFPAPSPGHRSGPPEPPRNRMPPPRPDVGSKPDSLPP---PVPNT 191

Query: 370 PRHVPSAYYHHLAP 411
           PR VPS+ ++  +P
Sbjct: 192 PRPVPSSLHNRGSP 205

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>VGLG_HHV2H (P13290) Glycoprotein G|
          Length = 699

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 20/66 (30%), Positives = 26/66 (39%)
 Frame = +1

Query: 214 PTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSAY 393
           P  +RPG             P  P     PLAP     P  A    MPS P P+H+P  +
Sbjct: 592 PPPARPGPI----------RPTLPPGILGPLAPNTPRPPAQAPAKDMPSGPTPQHIPLFW 641

Query: 394 YHHLAP 411
           +   +P
Sbjct: 642 FLTASP 647

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>IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2|
          Length = 924

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 265 QQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEP 372
           Q   P P  Q  P AP P H  +  GPH  P+ P+P
Sbjct: 136 QPGVPLPGQQGTPAAPHPGHPGMPTGPHPGPA-PKP 170

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>APP1_SCHPO (Q9P7E8) Protein app1|
          Length = 857

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 28/93 (30%), Positives = 37/93 (39%)
 Frame = +1

Query: 226 RPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSAYYHHL 405
           RP   V  + +   Q P AP +  +P  P+P   P+A      P VPE   VP      +
Sbjct: 562 RPAVPVVPEALSVPQPPVAPVAPEVPSVPQP---PVA------PVVPEAPSVPQPPVAPV 612

Query: 406 APXXXXXXXXXXVDPVHERVAARTPPRDYAAPL 504
           AP          V  V E  +   PP   AAP+
Sbjct: 613 APEVPSVPQRPAVPVVPEAPSVPQPP---AAPV 642



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
 Frame = +1

Query: 268 QAPPAPESQHIPLAPEPRHV---PLAAGPHYMPSVPEPRHVPSAYYHHLAPXXXXXXXXX 438
           +AP  P+   +P+ PE   V   P+A     +PSVP+P   P        P         
Sbjct: 555 EAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAP 614

Query: 439 XVDPVHERVAARTPPRDYAAP 501
            V  V +R A    P   + P
Sbjct: 615 EVPSVPQRPAVPVVPEAPSVP 635

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>WBP2_RAT (Q8R478) WW domain-binding protein 2 (WBP-2)|
          Length = 262

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
 Frame = +1

Query: 202 FAPFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPS----VPE 369
           + P P E  PG  + D  + Y Q PP P        P P   P+ +GP   P+       
Sbjct: 172 YPPPPPEFYPGPPMMDGAMGYVQPPPPP-------YPGPMEPPVVSGPSAPPTPAAEAKA 224

Query: 370 PRHVPSAYYH 399
                SAYY+
Sbjct: 225 AEAAASAYYN 234

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>MILK1_MOUSE (Q8BGT6) Molecule interacting with Rab13 (MIRab13) (MICAL-like|
           protein 1)
          Length = 870

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 28/118 (23%), Positives = 44/118 (37%)
 Frame = +1

Query: 178 EDSYRATHFAPFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMP 357
           E + +++   P P    P  F +++    + APP P     P  P P   P    P   P
Sbjct: 405 EQTQKSSGTEPEPKPYNP--FEEEEEEEGEPAPPVPSPSLAPPVPSPSPAPPVPSPAPAP 462

Query: 358 SVPEPRHVPSAYYHHLAPXXXXXXXXXXVDPVHERVAARTPPRDYAAPLGELAARADH 531
           S   P+ +    ++ + P               +R A R P    A+PL   A+R  H
Sbjct: 463 SEATPKSLHP--WYGITPTSS--------PKTKKRPAPRAPS---ASPLAIHASRLSH 507

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>IRX5_MOUSE (Q9JKQ4) Iroquois-class homeodomain protein IRX-5 (Iroquois|
           homeobox protein 5) (Homeodomain protein IRXB2)
          Length = 484

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 19/46 (41%), Positives = 21/46 (45%)
 Frame = +1

Query: 253 HIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSA 390
           H    + P A ES   P  P    +   AGPHY  SVP P   PSA
Sbjct: 260 HDELPRPPRAGESS--PAGPATARLAEDAGPHYPASVPAPGPHPSA 303

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>FTSK_SALTY (Q8ZQD5) DNA translocase ftsK|
          Length = 1351

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 27/115 (23%), Positives = 36/115 (31%), Gaps = 28/115 (24%)
 Frame = +1

Query: 262 YQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPS-------------------VPEPRHVP 384
           YQ  P   + Q    AP  + VP+A+ P Y  +                    PEP H P
Sbjct: 378 YQPHPQYAQPQEAQSAPWQQPVPVASAPQYAATPATAAEYDSLAPQETQPQWQPEPTHQP 437

Query: 385 SAYYH---------HLAPXXXXXXXXXXVDPVHERVAARTPPRDYAAPLGELAAR 522
           +  Y          H+ P           +P  E      PP  Y   + E  AR
Sbjct: 438 TPVYQPEPIAAEPSHMPPPVIEQPVATEPEPDTEETRPARPPLYYFEEVEEKRAR 492

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>YM11_YEAST (P39523) Hypothetical 105.9 kDa protein in RPL15B-GCR3 intergenic|
           region
          Length = 943

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +1

Query: 223 SRPGQFVQDDHIYYQQAPPA-PESQHIPLAPEPRHVPLAAGPHYMPSVPEP 372
           + PGQF        Q  PP  P  Q  P   +PR + L  GP Y P  P P
Sbjct: 322 NHPGQF--------QNTPPVMPSGQQPP--QQPRTLSLTNGPRYSPQNPRP 362

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>UB7I1_MOUSE (P58283) E3 ubiquitin ligase TRIAD3 (EC 6.3.2.-)|
           (Ubiquitin-conjugating enzyme 7-interacting protein 1)
           (UbcM4-interacting protein 83) (Triad domain-containing
           protein 3)
          Length = 853

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
 Frame = +1

Query: 250 DHIYYQQAPPAPESQHIPLAPEPRHVPLAAGP----HYMPSVPEPRHVP 384
           DH Y+Q   P P+ +   + P+ RH     GP    H  P    PR  P
Sbjct: 163 DHPYFQAPNPQPQERTNQVVPQERHSESEMGPMFFRHDFPEPAFPRPEP 211

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>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
            chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 6/96 (6%)
 Frame = +1

Query: 259  YYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSV----PEPRHVPSAYYH--HLAPXXX 420
            + QQ PP P  Q  P  P P   P    P     V    P PRH  S  Y   HL     
Sbjct: 1010 HIQQPPPPPGQQ--PTHPPPGQQPPPPQPAKPQQVIQHHPSPRHHKSDPYSAGHLREAPS 1067

Query: 421  XXXXXXXVDPVHERVAARTPPRDYAAPLGELAARAD 528
                     P  + +  ++PP+    P  ++  RA+
Sbjct: 1068 PLMIHSPQMPQFQSLTHQSPPQQNVQPKKQVKGRAE 1103

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>MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            3) (Runt-related transcription factor-binding protein 2)
            (Monocytic leukemia zinc finger protein) (Zinc finger
            protei
          Length = 2004

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +1

Query: 265  QQAPPAPESQHIPLAPEPRHVPLAAGPHYMPS---VPEPRHVP 384
            QQ PP P  Q  P  P+P+  P    P   P     P+P+  P
Sbjct: 1649 QQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPP 1691

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>KPC1_NEUCR (P87253) Protein kinase C-like (EC 2.7.11.13)|
          Length = 1142

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = +1

Query: 181 DSYRATHFAPFPTESRPGQFVQDDHIYYQQAPPAPESQHIPLAP--EPRHVPLAAGPHYM 354
           D+Y +    P   + +  Q  Q     YQQ P  P S+  P+AP  + + VP A+G    
Sbjct: 736 DAYSSPQARPQQQQQQQQQTPQQVSPMYQQNPQTPISKPQPVAPSYDNQVVPSASG---- 791

Query: 355 PSVPEPRHVPSA 390
             VP  + +PSA
Sbjct: 792 VPVPTKKPLPSA 803

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>CRE1_NEUCR (O59958) DNA-binding protein cre-1 (Carbon catabolite repressor)|
          Length = 430

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +1

Query: 271 APPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEP 372
           AP +P   H  L+P P H PLA   H     P P
Sbjct: 296 APSSPTFSHDSLSPTPDHTPLATPAHSPRLRPHP 329

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>RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology domains-containing|
            protein 1 (RAPH1) (Lamellipodin) (Proline-rich EVH1
            ligand 2) (PREL-2) (Protein RMO1) (Amyotrophic lateral
            sclerosis 2 chromosomal region candidate 9 gene protein)
          Length = 1302

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
 Frame = +1

Query: 274  PPAPESQHIPLAPE--PRHVPLAAGPHYMPSVPEPRHVPSAYYHHLAPXXXXXXXXXXVD 447
            PP+P +  +P+ P   P+     A P   P  P P  V         P          + 
Sbjct: 877  PPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLK 936

Query: 448  PVHERVAARTPPRDYAAP 501
            PV   VA ++PP   A P
Sbjct: 937  PVPANVAPQSPPAVKAKP 954

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>ICP34_HHV1D (P37318) Infected cell protein ICP34.5 (Neurovirulence factor|
           ICP34.5)
          Length = 252

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +1

Query: 277 PAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPS 387
           PAPE++    AP PR  P  AGP       +P H PS
Sbjct: 91  PAPEARPTAAAPRPRSPPPGAGP---GGGADPSHPPS 124

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>HES1_RAT (Q04666) Transcription factor HES-1 (Hairy and enhancer of split 1)|
           (Hairy-like) (RHL)
          Length = 281

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
 Frame = +1

Query: 199 HFAPFPTESRPGQFVQDDHIYYQQAPPAPES-----QHIPLAPEPRHVPLAAGPHYMPSV 363
           H A   T+     +    H   Q  PP P S     QH P AP P  VP+  G     + 
Sbjct: 142 HLANCMTQINAMTYPGQAHPALQAPPPPPPSGPGGPQHAPFAPPPPLVPIPGG-----AA 196

Query: 364 PEPRHVP 384
           P P   P
Sbjct: 197 PPPGSAP 203

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>CMGA_PIG (P04404) Chromogranin A precursor (CgA) [Contains: Pancreastatin;|
           Parastatin; WE-14] (Fragment)
          Length = 446

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
 Frame = +1

Query: 178 EDSYRATH-FAPFPTESRPGQFVQDDHIYYQQAP----PAPESQHIPLAPEPRHVPLAAG 342
           E+   +TH  A  P++ RPG   ++DH    Q P      P ++  P A         AG
Sbjct: 168 EEEAASTHPLASLPSKKRPGAQAEEDHEGPSQGPVDREKGPSAEQGPQAEREEEEEAEAG 227

Query: 343 PHYMPSVPEPR 375
              +P    PR
Sbjct: 228 EKAVPEEEGPR 238

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>ARGD_METKA (Q8TUZ5) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)|
          Length = 389

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 16/55 (29%), Positives = 21/55 (38%)
 Frame = +1

Query: 349 YMPSVPEPRHVPSAYYHHLAPXXXXXXXXXXVDPVHERVAARTPPRDYAAPLGEL 513
           + P VPE  HVP    + +            V+PV      R PP  +   L EL
Sbjct: 151 FEPLVPEFEHVPYGDVNAVEKAIDDDTAAVIVEPVQGEAGVRIPPEGFLRELREL 205

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>SYN_DROME (Q24546) Synapsin [Contains: Synapsin-1 (Syn1) (Syn1-S); Synapsin-2|
           (Syn2)]
          Length = 1025

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 25/91 (27%), Positives = 31/91 (34%)
 Frame = +1

Query: 250 DHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSAYYHHLAPXXXXXX 429
           D +     PPA      P+  +P   P+A GP  MP  P P     A     AP      
Sbjct: 15  DDVDPNSLPPAAR----PIQDQPTKPPVAGGPPNMPPPPAPGQPAGA-----APELSLSF 65

Query: 430 XXXXVDPVHERVAARTPPRDYAAPLGELAAR 522
                       AA  PPR  +AP     +R
Sbjct: 66  GAGKT----PATAAPAPPRGVSAPTSPAKSR 92

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>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
           (ALL1-related protein)
          Length = 5262

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 21/84 (25%), Positives = 35/84 (41%)
 Frame = +1

Query: 262 YQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSAYYHHLAPXXXXXXXXXX 441
           ++++P +P  +  PL+P P    L+  P   P  P P   P +    ++           
Sbjct: 603 FEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRL 662

Query: 442 VDPVHERVAARTPPRDYAAPLGEL 513
             P  E  +  +PP    +PLGEL
Sbjct: 663 SPPPEE--SPLSPPA--LSPLGEL 682



 Score = 29.6 bits (65), Expect = 6.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 280 APESQHIPLAPEPRHVPLAAGPHYMPSVPEP 372
           AP ++ +PL P P   PL+  P   P+ P P
Sbjct: 432 APLNEEMPLLPPPEESPLSPPPEESPTSPPP 462



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +1

Query: 262 YQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVP 384
           ++++P +P  + +P +P P    L+  P   P  P P   P
Sbjct: 549 FEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESP 589



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = +1

Query: 214 PTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSA 390
           P ES P   +++  +   +  P   +   PL+P P   PL+      P  P P  +P++
Sbjct: 506 PPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTS 564

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>EFS_HUMAN (O43281) Embryonal Fyn-associated substrate (HEFS)|
          Length = 561

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
 Frame = +1

Query: 214 PTESRPGQFVQDDHIYYQQ----APPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHV 381
           P+   PG     D     Q    +PP P    +P A      PL A P  +P  P P  V
Sbjct: 264 PSPEPPGALASHDQDTLAQLLARSPPPPHRPRLPSAESLSRRPLPALP--VPEAPSPSPV 321

Query: 382 PS 387
           PS
Sbjct: 322 PS 323

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>LRP6_MOUSE (O88572) Low-density lipoprotein receptor-related protein 6 precursor|
          Length = 1613

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 286  ESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSAYYHHLAP 411
            +S+ +P  P PR   L+A  +Y    P P +   +Y HHL P
Sbjct: 1563 DSEPVPPPPTPRSQYLSAEENYESCPPSP-YTERSYSHHLYP 1603

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>LRP6_HUMAN (O75581) Low-density lipoprotein receptor-related protein 6 precursor|
          Length = 1613

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 286  ESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSAYYHHLAP 411
            +S+ +P  P PR   L+A  +Y    P P +   +Y HHL P
Sbjct: 1563 DSEPVPPPPTPRSQYLSAEENYESCPPSP-YTERSYSHHLYP 1603

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>CREA_GIBFU (O94131) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 420

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
 Frame = +1

Query: 271 APPAPESQHIPLAPEPRHVPLAA---GPHYMP-----SVPEPRHVPSAYYHHLAPXXXXX 426
           AP +P   H  L+P P H P+A     P   P      +P  R++  +  H+  P     
Sbjct: 283 APSSPTFSHDSLSPTPDHTPIATPAHSPRLRPFSTGYELPSLRNL--SLQHNTTPALAPM 340

Query: 427 XXXXXVDPVHERVAARTPPRDYAAPLGELAARAD 528
                 +   +  A  T PR     L ++ +R D
Sbjct: 341 EPHLEQNQFQQGSAPTTQPRPTGMSLTDIISRPD 374

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>SKI2_YEAST (P35207) Antiviral helicase SKI2 (EC 3.6.1.-)|
          Length = 1287

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 21/73 (28%), Positives = 33/73 (45%)
 Frame = -2

Query: 445 PLENGSKNHQMKEPNGGNTLMGHAEALVQKAYSEALRQEEHGEALGQEECVETRVQEALV 266
           P EN  +N Q KE    N +    +  ++ A    L++EE       EE +E   +E   
Sbjct: 210 PAENEDQNGQFKELKQLNEIDNELDIRIE-ANEAKLKEEEKSAKSISEEIMEEATEETTA 268

Query: 265 DNICDHPGQIDQV 227
           DN  D   +ID++
Sbjct: 269 DNADD--AEIDEL 279

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>ESX1L_HUMAN (Q8N693) Extraembryonic, spermatogenesis, homeobox 1-like protein|
          Length = 406

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +1

Query: 274 PPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSAYYHHLAP 411
           P  P     P+AP P   P+  G    P  P PR  P   +  +AP
Sbjct: 257 PMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAP 302

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>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 20/82 (24%), Positives = 29/82 (35%)
 Frame = +1

Query: 265 QQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPSAYYHHLAPXXXXXXXXXXV 444
           Q  PP P     P AP P+  P+ + P  + + P+P                       +
Sbjct: 248 QTPPPVPPQPQPPPAPAPQ--PVQSHPPIIAATPQPVKTKKG-----VKRKADTTTPTTI 300

Query: 445 DPVHERVAARTPPRDYAAPLGE 510
           DP+HE      PP      LG+
Sbjct: 301 DPIHE--PPSLPPEPKTTKLGQ 320

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>WBP2_HUMAN (Q969T9) WW domain-binding protein 2 (WBP-2)|
          Length = 261

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
 Frame = +1

Query: 202 FAPFPTESRPGQFVQDDHIYYQQAPPAP---------ESQHIPLAP--EPRHVPLAAGPH 348
           + P P E  PG  + D  + Y Q PP P             +P  P  E +    AA  +
Sbjct: 172 YPPPPPEFYPGPPMMDGAMGYVQPPPPPYPGPMEPPVSGPDVPSTPAAEAKAAEAAASAY 231

Query: 349 YMPSVPEPRHVPSA 390
           Y P  P   ++P++
Sbjct: 232 YNPGNPHNVYMPTS 245

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>HUNB_DRODS (O46240) Protein hunchback (Fragments)|
          Length = 198

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 29/167 (17%), Positives = 49/167 (29%), Gaps = 22/167 (13%)
 Frame = +1

Query: 67  LDERYGHEESRHQHEDRPHPLHVEDRRXXXXXXXXXXEDSYRATHFAPFPTESRPGQFVQ 246
           +   + H  + H H   PH                    +  + H +P P+ + P   + 
Sbjct: 15  ISHHHHHHHAHHSHHQHPH--------------DSNSNSNASSPHQSPLPSPNPPSNTIL 60

Query: 247 DDHIYYQQAPPAPESQHIPLAPEPRHVPLAA------------GPHYMPSVPEP------ 372
               Y +Q     + Q      +P     AA             P  +P +P P      
Sbjct: 61  QLEQYLKQQQQQQQQQQQQQQQQPMDTLCAAAMTPSPSNNDQNSPLMLPGLPNPMQSIML 120

Query: 373 ---RHVPSAYYHHLAPXXXXXXXXXXVD-PVHERVAARTPPRDYAAP 501
              R  P+A      P          +    ++++ A TPP D   P
Sbjct: 121 ANLRPSPTATTTTTTPAAAPTTTAAAIALQANDKLQALTPPMDVTPP 167

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>TATB_XANAC (Q8PEX3) Sec-independent protein translocase protein tatB homolog|
          Length = 208

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
 Frame = +1

Query: 181 DSYRATHFAPFPTESRPGQFVQDDHIYYQQAP-----PAPESQHIPLAPEP-RHVPLAAG 342
           D+  A H AP   +++P       H     AP     PAP + H+  APEP   VP+ AG
Sbjct: 133 DAAGAAHTAPVIAQAQP--IAPAPHQTLVPAPHDAIVPAPHAAHLASAPEPVAVVPVDAG 190

Query: 343 --PHYMPSVP 366
                MPS P
Sbjct: 191 TPAASMPSAP 200

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>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein)
          Length = 883

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = +1

Query: 208 PFPTESRPGQFVQD-DHIYY-QQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHV 381
           P   +S+P Q VQ   H    QQA  AP++Q    A + +  P A      P  P+P+  
Sbjct: 664 PSVQQSQPPQQVQQVQHAQPPQQAQKAPQAQQAQQAQQAQQAPQA------PQTPQPQQA 717

Query: 382 PSAYYHHLAP 411
           P       AP
Sbjct: 718 PQVQQAQQAP 727

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>Y066_NPVOP (Q83949) Hypothetical 98.6 kDa protein (ORF71)|
          Length = 875

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +1

Query: 259 YYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVP 384
           Y+ Q PP P     P  P+P   P    P   P  P+P   P
Sbjct: 98  YWPQQPPQPPPDQ-PQQPQPPQQPPQQPPQQQPQPPQPPQQP 138

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>SRCA_HUMAN (Q86TD4) Sarcalumenin precursor|
          Length = 932

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 6/113 (5%)
 Frame = -2

Query: 448 DPLENGSKNHQMKEPNG------GNTLMGHAEALVQKAYSEALRQEEHGEALGQEECVET 287
           D  E G       EP G      G+T    A  + ++   EA  +EE G+  G EE    
Sbjct: 266 DQGEPGPAAEASAEPGGAQSVKAGDTEESQAPEMTEEDADEASSEEESGDGSGSEEEGGV 325

Query: 286 RVQEALVDNICDHPGQIDQVGTR*EMEQSVLPYMSPQEEEHVQPPAGACLQHA 128
             +E   ++  D     +  G     E++  P  + + +E  +P  G  LQ A
Sbjct: 326 PSEEESEEDSGDGASSEEAEGA---SEEATEPQEAGEPQEAREPQEGGDLQEA 375

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>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +1

Query: 214 PTESRPGQFVQDDHIYYQQAPPAPESQHIPLAPE-PRHVPLAAGP 345
           PT++RPG  V+         P APE+     APE P   P   GP
Sbjct: 104 PTDARPGPAVKPGPAPTPARPAAPEAPAAKAAPEAPAQRPTPGGP 148

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>ICP34_HHV1N (P37319) Infected cell protein ICP34.5 (Neurovirulence factor|
           ICP34.5)
          Length = 245

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 277 PAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPS 387
           PAPE++    AP PR  P  AGP        P H PS
Sbjct: 84  PAPEARPTAAAPRPRSPPPGAGP---GGGANPSHPPS 117

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>ICP34_HHV1F (P08353) Infected cell protein ICP34.5 (Neurovirulence factor|
           ICP34.5)
          Length = 263

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 277 PAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPS 387
           PAPE++    AP PR  P  AGP        P H PS
Sbjct: 90  PAPEARPTAAAPRPRSPPPGAGP---GGGANPSHPPS 123

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>MUA1_XENLA (P10667) Integumentary mucin A.1 precursor (FIM-A.1)|
           (Preprospasmolysin)
          Length = 400

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 PPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPS 387
           P  PE+  +P  PE   VP       +P+ PE   VP+
Sbjct: 191 PTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPT 228



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 PPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPS 387
           P  PE+  +P  PE   VP       +P+ PE   VP+
Sbjct: 182 PTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPT 219



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 PPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPS 387
           P  PE+  +P  PE   VP       +P+ PE   VP+
Sbjct: 173 PTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPT 210



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 PPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPS 387
           P  PE+  +P  PE   VP       +P+ PE   VP+
Sbjct: 164 PTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPT 201



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 PPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPS 387
           P  PE+  +P  PE   VP       +P+ PE   VP+
Sbjct: 155 PTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPT 192



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 PPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPS 387
           P  PE+  +P  PE   VP       +P+ PE   VP+
Sbjct: 146 PTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPT 183



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 PPAPESQHIPLAPEPRHVPLAAGPHYMPSVPEPRHVPS 387
           P  PE+  +P  PE   VP       +P+ PE   VP+
Sbjct: 137 PTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPT 174

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>GLYA_BLOPB (Q492D5) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 416

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 16/96 (16%)
 Frame = -2

Query: 346 EALRQEEHGEALGQEECVETRVQEALVDNI----------------CDHPGQIDQVGTR* 215
           E +RQEEH E +  E  V T+V +A    +                C++   I+Q+G   
Sbjct: 18  ETIRQEEHIELIASENYVSTQVMKAQGSQLTNKYAEGYPGKRYYGGCEYVDMIEQLGINR 77

Query: 214 EMEQSVLPYMSPQEEEHVQPPAGACLQHAMDVAYLH 107
             E     Y       ++QP +G+    ++  A LH
Sbjct: 78  AKELFSADY------ANIQPHSGSQANFSVYNALLH 107

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>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
           cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +1

Query: 208 PFPTESRPGQFVQDDHIYYQQAPPAPESQH-IPLAPEPRHVPLAAGPHYM---PSVPEPR 375
           P P + +P Q V       Q AP  P+ QH  P  P+P+  P  A P      P+ P+P+
Sbjct: 399 PIPAKPQPQQPVATKPQPQQPAPAKPQPQHPTPAKPQPQQ-PTPAKPQPQQPTPAKPQPQ 457

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>NR2E3_HUMAN (Q9Y5X4) Photoreceptor-specific nuclear receptor (Retina-specific|
           nuclear receptor)
          Length = 410

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = +1

Query: 217 TESRPGQFVQDDHIYYQQAPPAPESQHIPLAPEPRHVPLAAGPHYMPSV 363
           TESRP   V         APPAP  +  P  P P     A G H+M S+
Sbjct: 139 TESRPESLV---------APPAPAGRS-PRGPTPMSAARALGHHFMASL 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,343,064
Number of Sequences: 219361
Number of extensions: 1919857
Number of successful extensions: 7298
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 6390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7175
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result