ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bastl55c10 | 425 | BY857989 | not_full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 43 | not_full | LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) Length = 866 | 47 | -- | --- | 0 | -- | --- | 0 |
| bastl55c09 | 476 | BY857988 | full | ref|XM_474230.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2682 | 274 | not_full | PAX8_RAT (P51974) Paired box protein Pax-8 Length = 458 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl55c08 | 471 | BY857987 | not_full | ref|NM_190478.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2997 | 328 | not_full | ICP4_GAHVG (Q02362) Trans-acting transcriptional activator protein ICP4 (Immediate-early protein IE175) Length = 1415 | 2 | -- | --- | 0 | -- | --- | 0 |
| bastl55c07 | 486 | BY857986 | not_full | gb|AY049041.1| Triticum aestivum 28S ribosomal RNA gene, partial sequence Length = 3341 | 500 | not_full | SALL4_HUMAN (Q9UJQ4) Sal-like protein 4 (Zinc finger protein SALL4) Length = 1053 | 32 | -- | --- | 0 | -- | --- | 0 |
| bastl55c06 | 462 | BY857985 | not_full | ref|XM_469695.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4020 | 89 | not_full | LRC8E_MOUSE (Q66JT1) Leucine-rich repeat-containing protein 8E Length = 795 | 57 | -- | --- | 0 | -- | --- | 0 |
| bastl55c05 | 486 | BY857984 | not_full | gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, complete cds Length = 3588 | 205 | full | UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3 Length = 1053 | 54 | -- | --- | 0 | -- | --- | 0 |
| bastl55c03 | 471 | BY857983 | not_full | ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3139 | 50 | full | HSP97_STRPU (Q06068) 97 kDa heat shock protein (Egg sperm receptor) Length = 889 | 500 | -- | --- | 0 | -- | --- | 0 |
| bastl55c02 | 472 | BY857982 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 500 | not_full | NFAC4_HUMAN (Q14934) Nuclear factor of activated T-cells, cytoplasmic 4 (NF-ATc4) (NFATc4) (T cell transcription factor NFAT3) (NF-AT3) Length = 902 | 12 | -- | --- | 0 | -- | --- | 0 |
| bastl55c01 | 433 | BY857981 | not_full | ref|NM_137735.1| Drosophila melanogaster CG30394-RA, transcript variant A (CG30394), mRNA Length = 3288 | 500 | not_full | PAT2_CAEEL (P34446) Integrin alpha pat-2 precursor Length = 1226 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl55b12 | 199 | BY857980 | not_full | gb|AC132488.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0522C01, complete sequence Length = 136120 | 20 | not_full | SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Forced expression inhibition of growth A) Length = 1790 | 105 | -- | --- | 0 | -- | --- | 0 |
| bastl55b11 | 373 | BY857979 | not_full | ref|XM_470900.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3525 | 60 | not_full | YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I Length = 1794 | 38 | -- | --- | 0 | -- | --- | 0 |
| bastl55b10 | 355 | BY857978 | not_full | gb|AY111501.1| Zea mays CL31834_1 mRNA sequence Length = 621 | 66 | not_full | KAS2_STRVN (P16541) Granaticin polyketide putative beta-ketoacyl synthase 2 (EC 2.3.1.-) (ORF2) Length = 415 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl55b09 | 396 | BY857977 | not_full | dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 | 42 | not_full | ODO1_CAEEL (O61199) 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1029 | 57 | -- | --- | 0 | -- | --- | 0 |
| bastl55b08 | 466 | BY857976 | not_full | gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 | 124 | not_full | HYDL_STRCO (P42534) Putative polyketide hydroxylase (EC 1.14.13.-) (WhiE ORF VIII) Length = 627 | 5 | -- | --- | 0 | -- | --- | 0 |
| bastl55b07 | 432 | BY857975 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 67 | not_full | NUP54_DROME (Q9V6B9) Probable nucleoporin Nup54 Length = 610 | 108 | -- | --- | 0 | -- | --- | 0 |
| bastl55b06 | 415 | BY857974 | full | gb|AY245454.1| Hordeum vulgare subsp. vulgare thioredoxin h isoform 1 mRNA, complete cds Length = 357 | 111 | not_full | TRXH_ORYSA (Q42443) Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) Length = 122 | 312 | -- | --- | 0 | -- | --- | 0 |
| bastl55b05 | 464 | BY857973 | not_full | dbj|AK065821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043G04, full insert sequence Length = 3034 | 43 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl55b04 | 453 | BY857972 | not_full | ref|NM_186453.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3222 | 25 | not_full | ANK1_HUMAN (P16157) Ankyrin-1 (Erythrocyte ankyrin) (Ankyrin-R) Length = 1880 | 206 | -- | --- | 0 | -- | --- | 0 |
| bastl55b03 | 420 | BY857971 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 235 | not_full | WZZE_SALTY (O33789) Lipopolysaccharide biosynthesis protein wzzE (Protein metN) Length = 348 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl55b01 | 442 | BY857970 | not_full | emb|AL691493.17| Mouse DNA sequence from clone RP23-264D18 on chromosome X, complete sequence Length = 202742 | 94 | not_full | ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein) Length = 1183 | 411 | -- | --- | 0 | -- | --- | 0 |
| bastl55a12 | 420 | BY857969 | full | gb|AY532594.1| Triticum aestivum minichromosomal maintenance factor (MCM2) mRNA, complete cds Length = 2923 | 47 | not_full | MCM2_DROME (P49735) DNA replication licensing factor Mcm2 (Minichromosome maintenance 2 protein) (DmMCM2) Length = 887 | 500 | -- | --- | 0 | -- | --- | 0 |
| bastl55a11 | 435 | BY857968 | not_full | gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA, complete cds Length = 2887 | 82 | not_full | IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) Length = 788 | 20 | -- | --- | 0 | -- | --- | 0 |
| bastl55a10 | 438 | BY857967 | not_full | gb|AC119848.8| Mus musculus chromosome 7, clone RP23-73B20, complete sequence Length = 239297 | 31 | not_full | AEX3_CAEEL (O02626) Regulator of presynaptic activity aex-3 (Aboc, expulsion defective protein 3) Length = 1409 | 13 | -- | --- | 0 | -- | --- | 0 |
| bastl55a09 | 36 | BY857966 | not_full | gb|AC135916.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0088M06, from chromosome 5, complete sequence Length = 150099 | 18 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl55a08 | 480 | BY857965 | not_full | gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 | 22 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl55a07 | 468 | BY857964 | not_full | gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 | 37 | not_full | DLGP2_HUMAN (Q9P1A6) Disks large-associated protein 2 (DAP-2) (SAP90/PSD-95-associated protein 2) (SAPAP2) (PSD-95/SAP90-binding protein 2) (Fragment) Length = 1019 | 30 | -- | --- | 0 | -- | --- | 0 |
| bastl55a06 | 448 | BY857963 | not_full | ref|NM_186040.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1679 | 27 | not_full | Y2F9_ENCCU (Q8STG8) Hypothetical protein ECU02_1590/ECU04_0060/ECU08_2120 Length = 207 | 8 | -- | --- | 0 | -- | --- | 0 |
| bastl55a05 | 492 | BY857962 | not_full | gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA, complete cds Length = 2887 | 155 | not_full | IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) Length = 788 | 15 | -- | --- | 0 | -- | --- | 0 |
| bastl55a04 | 463 | BY857961 | not_full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 49 | not_full | LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) Length = 866 | 46 | -- | --- | 0 | -- | --- | 0 |
| bastl55a03 | 525 | BY857960 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 181 | not_full | U202A_ARATH (Q9XIK4) Hypothetical UPF0202 protein At1g10490 Length = 1058 | 19 | -- | --- | 0 | -- | --- | 0 |
| bastl55a02 | 455 | BY857959 | not_full | dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 | 80 | not_full | Y8I5_ENCCU (Q8SU92) Hypothetical protein ECU10_1850 Length = 268 | 8 | -- | --- | 0 | -- | --- | 0 |
| bastl55a01 | 495 | BY857958 | not_full | ref|XM_474123.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2751 | 25 | not_full | FLIP1_RAT (Q8K4T4) Filamin-A-interacting protein 1 (FILIP) Length = 1212 | 9 | -- | --- | 0 | -- | --- | 0 |
| bastl54h12 | 335 | BY857957 | not_full | dbj|AK122110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127H20, full insert sequence Length = 2754 | 95 | not_full | CMTA4_ARATH (Q9FYG2) Calmodulin-binding transcription activator 4 (Signal-responsive protein 5) (Ethylene-induced calmodulin-binding protein d) (EICBP.d) (Ethylene-induced calmodulin-binding protein 4) (EICBP4) (AtFIN21) Length = 1016 | 28 | -- | --- | 0 | -- | --- | 0 |
| bastl54h11 | 335 | BY857956 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 10 | not_full | ATL2I_ARATH (Q8RX29) RING-H2 finger protein ATL2I Length = 217 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl54h10 | 395 | BY857955 | not_full | gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 | 57 | not_full | RNZ2_MOUSE (Q80Y81) Zinc phosphodiesterase ELAC protein 2 (EC 3.1.26.11) (Ribonuclease Z 2) (RNase Z 2) (tRNase Z 2) (tRNA 3 endonuclease 2) (ElaC homolog protein 2) Length = 831 | 25 | -- | --- | 0 | -- | --- | 0 |
| bastl54h09 | 430 | BY857954 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 60 | not_full | YC47_SCHPO (O14053) Hypothetical WD-repeat protein C1672.07 in chromosome III Length = 902 | 9 | -- | --- | 0 | -- | --- | 0 |
| bastl54h08 | 387 | BY857953 | not_full | ref|NM_191405.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2550 | 500 | not_full | FUT4_RAT (Q62994) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside 3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV) (Fuc-TIV) Length = 433 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl54h07 | 193 | BY857952 | not_full | ref|XM_467437.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3793 | 49 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl54h06 | 490 | BY857951 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 24 | not_full | CN032_MOUSE (Q8BH93) Protein C14orf32 homolog Length = 242 | 3 | -- | --- | 0 | -- | --- | 0 |
| bastl54h04 | 464 | BY857950 | not_full | gb|AY674618.1| Microdesmis pierlotiana 18S ribosomal RNA gene, partial sequence Length = 1700 | 500 | not_full | ILVC_RHOBA (Q7UKY0) Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 334 | 8 | -- | --- | 0 | -- | --- | 0 |
| bastl54h03 | 429 | BY857949 | not_full | dbj|AK120068.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N11, full insert sequence Length = 2975 | 69 | not_full | PSA_HUMAN (P55786) Puromycin-sensitive aminopeptidase (EC 3.4.11.-) (PSA) Length = 919 | 39 | -- | --- | 0 | -- | --- | 0 |
| bastl54h02 | 354 | BY857948 | not_full | dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M16, full insert sequence Length = 3155 | 84 | not_full | IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2 Length = 969 | 60 | -- | --- | 0 | -- | --- | 0 |
| bastl54h01 | 411 | BY857947 | not_full | ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2481 | 74 | not_full | ARFB_ARATH (Q94JM3) Auxin response factor 2 (ARF1-binding protein) (ARF1-BP) Length = 859 | 31 | -- | --- | 0 | -- | --- | 0 |
| bastl54g12 | 445 | BY857946 | not_full | ref|XM_479406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3125 | 114 | not_full | MBRL_HUMAN (Q4ZIN3) Membralin Length = 620 | 5 | -- | --- | 0 | -- | --- | 0 |
| bastl54g11 | 401 | BY857945 | not_full | emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 | 171 | not_full | PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacemaker protein Rigui) (mPER) (M-Rigui) Length = 1291 | 25 | -- | --- | 0 | -- | --- | 0 |
| bastl54g10 | 461 | BY857944 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 229 | not_full | CARB_BUCAI (P57244) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain) Length = 1078 | 133 | -- | --- | 0 | -- | --- | 0 |
| bastl54g09 | 476 | BY857943 | not_full | ref|XM_483828.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4423 | 120 | not_full | CINA_CLOPE (Q8XP33) CinA-like protein Length = 412 | 40 | -- | --- | 0 | -- | --- | 0 |
| bastl54g08 | 436 | BY857942 | not_full | ref|XM_493810.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2727 | 74 | full | RRP44_HUMAN (Q9Y2L1) Exosome complex exonuclease RRP44 (EC 3.1.13.-) (Ribosomal RNA-processing protein 44) (DIS3 protein homolog) Length = 958 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl54g07 | 276 | BY857941 | not_full | ref|XM_469348.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1515 | 37 | not_full | FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contains: Fibrinopeptide A] (Fragment) Length = 966 | 3 | -- | --- | 0 | -- | --- | 0 |
| bastl54g06 | 451 | BY857940 | full | gb|AY326952.1| Triticum aestivum putative plasma membrane Na+/H+ antiporter mRNA, complete cds Length = 3429 | 53 | not_full | NHX7_ARATH (Q9LKW9) Sodium/hydrogen exchanger 7 (Na(+)/H(+) exchanger 7) (NHE-7) (Protein SALT OVERLY SENSITIVE 1) Length = 1146 | 8 | -- | --- | 0 | -- | --- | 0 |
