ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl55c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ICP4_GAHVG (Q02362) Trans-acting transcriptional activator prote... 31 1.4
2T22D2_HUMAN (O75157) TSC22 domain family protein 2 (TSC22-relate... 28 9.1

>ICP4_GAHVG (Q02362) Trans-acting transcriptional activator protein ICP4|
           (Immediate-early protein IE175)
          Length = 1415

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 423 YPESSSIYQTSPLPPPGRCW 364
           Y    S++   PLPPPGRCW
Sbjct: 279 YDLCGSVWWEVPLPPPGRCW 298



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>T22D2_HUMAN (O75157) TSC22 domain family protein 2 (TSC22-related-inducible|
           leucine zipper protein 4)
          Length = 780

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 450 QMIHRPLPAYPESSSIYQTSPLPPP 376
           + + +P PA P+S S+ Q  P PPP
Sbjct: 256 EKMSQPTPAQPQSFSVGQPQPPPPP 280


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,404,612
Number of Sequences: 219361
Number of extensions: 546950
Number of successful extensions: 1685
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1685
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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