ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl55a01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FLIP1_RAT (Q8K4T4) Filamin-A-interacting protein 1 (FILIP) 31 2.1
2KINH_SYNRA (O43093) Kinesin heavy chain (Synkin) 30 2.7
3FLIP1_MOUSE (Q9CS72) Filamin-A-interacting protein 1 (FILIP) 30 3.5
4GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macr... 30 3.5
5Y1002_CHLCV (P59707) Hypothetical UPF0242 protein CCA01002 30 3.5
6KINH_NEUCR (P48467) Kinesin heavy chain 30 4.6
7KINH_GIBMO (Q86Z98) Kinesin heavy chain 30 4.6
8KINH_BOTCI (Q86ZC1) Kinesin heavy chain 30 4.6
9Y1963_THETN (Q8R8N2) Putative hydrolase TTE1963 (EC 3.1.-.-) 29 7.8

>FLIP1_RAT (Q8K4T4) Filamin-A-interacting protein 1 (FILIP)|
          Length = 1212

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
 Frame = +3

Query: 150 KASERAVSVKNKPNDKEHEGKIARLE--------RSLQGLNEQLSFAHAECFEKDAILSK 305
           K   +   +K K  ++EH  K  RLE          L+ L E  S + +EC +    L K
Sbjct: 398 KTEAQCRELKKKLQEEEHHSKELRLEVEKLQKRMSELEKLEEAFSRSKSECTQLHLNLEK 457

Query: 306 QAKVAEEAILGWXXXXXXXXXXXXXLDDTLHEKAMVEXRIRQLDEALNVAAEERELLMKD 485
           +  + +                     D L+E  +V+ R+++L E      E+ EL +KD
Sbjct: 458 EKNLTK---------------------DLLNELEVVKSRVKEL-ECSESRLEKAELSLKD 495



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>KINH_SYNRA (O43093) Kinesin heavy chain (Synkin)|
          Length = 935

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/59 (32%), Positives = 33/59 (55%)
 Frame = +3

Query: 159 ERAVSVKNKPNDKEHEGKIARLERSLQGLNEQLSFAHAECFEKDAILSKQAKVAEEAIL 335
           E+  +V    N+K  + K+A LER+L    EQL+    +  E++A L K+  +AE  ++
Sbjct: 781 EQYNNVLRASNNKAQQKKMAFLERNL----EQLTNVQKQLVEQNASLKKEVALAERKLI 835



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>FLIP1_MOUSE (Q9CS72) Filamin-A-interacting protein 1 (FILIP)|
          Length = 1211

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
 Frame = +3

Query: 150 KASERAVSVKNKPNDKEHEGKIARLE--------RSLQGLNEQLSFAHAECFEKDAILSK 305
           K   +   +K K  ++EH  K  RLE          L+ L E  S + +EC +    L K
Sbjct: 399 KTEAQCRELKKKLQEEEHHSKELRLEVEKLQKRMSELEKLEEAFSRSKSECTQLHLNLEK 458

Query: 306 QAKVAEEAILGWXXXXXXXXXXXXXLDDTLHEKAMVEXRIRQLDEALNVAAEERELLMKD 485
           +  + +                     D L+E  +V+ R+++L E      E+ EL +KD
Sbjct: 459 EKNLTK---------------------DLLNELEVVKSRVKEL-ECSESRLEKVELSLKD 496



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>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa|
            Golgi complex-associated protein) (GCP372)
          Length = 3259

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 26/93 (27%), Positives = 40/93 (43%)
 Frame = +3

Query: 207  GKIARLERSLQGLNEQLSFAHAECFEKDAILSKQAKVAEEAILGWXXXXXXXXXXXXXLD 386
            G I RL +SL  +  Q+S   A+  EKD +L + A + EE                  +D
Sbjct: 1511 GTIERLTKSLADVESQVS---AQNKEKDTVLGRLALLQEE-----------RDKLITEMD 1556

Query: 387  DTLHEKAMVEXRIRQLDEALNVAAEERELLMKD 485
             +L E   +      L  AL    E++E L+K+
Sbjct: 1557 RSLLENQSLSSSCESLKLALEGLTEDKEKLVKE 1589



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>Y1002_CHLCV (P59707) Hypothetical UPF0242 protein CCA01002|
          Length = 401

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 162 RAVSVKNKPNDKEHEGKIARLERSLQGLNEQLSFAHAECFEKD 290
           R+V +K K + +  EG IA L    Q L  QL     EC EK+
Sbjct: 119 RSVFMKTKADTQRMEGAIAHLREENQCLQLQLDALSQECREKE 161



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>KINH_NEUCR (P48467) Kinesin heavy chain|
          Length = 928

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = +3

Query: 159 ERAVSVKNKPNDKEHEGKIARLERSLQGLNEQLSFAHAECFEKDAILSKQAKVAEEAIL 335
           E+  +V    N++  + K+A LER+L    EQL+    +  E+++ L K+  +AE  ++
Sbjct: 769 EQYNNVLRSSNNRAQQKKMAFLERNL----EQLTQVQRQLVEQNSALKKEVAIAERKLM 823



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>KINH_GIBMO (Q86Z98) Kinesin heavy chain|
          Length = 931

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = +3

Query: 159 ERAVSVKNKPNDKEHEGKIARLERSLQGLNEQLSFAHAECFEKDAILSKQAKVAEEAIL 335
           E+  +V    N++  + K+A LER+L    EQL+    +  E+++ L K+  +AE  ++
Sbjct: 768 EQYNNVLRSSNNRAQQKKMAFLERNL----EQLTQVQRQLVEQNSALKKEVAIAERKLI 822



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>KINH_BOTCI (Q86ZC1) Kinesin heavy chain|
          Length = 880

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 17/59 (28%), Positives = 32/59 (54%)
 Frame = +3

Query: 159 ERAVSVKNKPNDKEHEGKIARLERSLQGLNEQLSFAHAECFEKDAILSKQAKVAEEAIL 335
           E+  +V    N++  + K+A LER+L    EQL+    +  E++  L K+  +AE  ++
Sbjct: 769 EQYNNVLRSSNNRAQQKKMAFLERNL----EQLTHVQRQLVEQNGSLKKEVAIAERKLI 823



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>Y1963_THETN (Q8R8N2) Putative hydrolase TTE1963 (EC 3.1.-.-)|
          Length = 254

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +3

Query: 189 NDKEHEGKIARLERSLQGLNEQLSFAHAECFEKDAILSKQAKVAEEAI 332
           N  + EG+I   ER L+ L+  ++  H ECFE    + +  K    AI
Sbjct: 82  NIMDEEGRIDLPERILKKLDIVIASLHDECFEPSEDVERNTKALINAI 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,432,513
Number of Sequences: 219361
Number of extensions: 1261479
Number of successful extensions: 3055
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3055
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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