ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl55b11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470900.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3525 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 309 gccgacttaccggtcactggcagcgccggtcagcaatccggtcgacaagttcgcgctcct 368 |||||| ||| |||| || || ||||| |||| ||| || |||||||||||||||||||| Sbjct: 120 gccgacgtacaggtcgctcgccgcgcccgtcaccaagcccgtcgacaagttcgcgctcct 179 Query: 369 ccctg 373 |||| Sbjct: 180 tcctg 184
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 309 gccgacttaccggtcactggcagcgccggtcagcaatccggtcgacaagttcgcgctcct 368 |||||| ||| |||| || || ||||| |||| ||| || |||||||||||||||||||| Sbjct: 16235506 gccgacgtacaggtcgctcgccgcgcccgtcaccaagcccgtcgacaagttcgcgctcct 16235565 Query: 369 ccctg 373 |||| Sbjct: 16235566 tcctg 16235570
>gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genomic sequence, complete sequence Length = 135585 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 309 gccgacttaccggtcactggcagcgccggtcagcaatccggtcgacaagttcgcgctcct 368 |||||| ||| |||| || || ||||| |||| ||| || |||||||||||||||||||| Sbjct: 33522 gccgacgtacaggtcgctcgccgcgcccgtcaccaagcccgtcgacaagttcgcgctcct 33581 Query: 369 ccctg 373 |||| Sbjct: 33582 tcctg 33586
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 309 gccgacttaccggtcactggcagcgccggtcagcaatccggtcgacaagttcgcgctcct 368 |||||| ||| |||| || || ||||| |||| ||| || |||||||||||||||||||| Sbjct: 16229139 gccgacgtacaggtcgctcgccgcgcccgtcaccaagcccgtcgacaagttcgcgctcct 16229198 Query: 369 ccctg 373 |||| Sbjct: 16229199 tcctg 16229203
>dbj|AK073203.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021H21, full insert sequence Length = 3958 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 309 gccgacttaccggtcactggcagcgccggtcagcaatccggtcgacaagttcgcgctcct 368 |||||| ||| |||| || || ||||| |||| ||| || |||||||||||||||||||| Sbjct: 175 gccgacgtacaggtcgctcgccgcgcccgtcaccaagcccgtcgacaagttcgcgctcct 234 Query: 369 ccctg 373 |||| Sbjct: 235 tcctg 239
>gb|AC119897.8| Mus musculus chromosome 1, clone RP24-227F14, complete sequence Length = 195375 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 65 ccacccccaccccctctgtctctc 88 |||||||||||||||||||||||| Sbjct: 87188 ccacccccaccccctctgtctctc 87165
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 113 caccgccgccagcccccctccc 134 |||||||||||||||||||||| Sbjct: 94921 caccgccgccagcccccctccc 94900
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 113 caccgccgccagcccccctccc 134 |||||||||||||||||||||| Sbjct: 24618019 caccgccgccagcccccctccc 24617998
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 277 gtggcggagggggacgcggagg 298 |||||||||||||||||||||| Sbjct: 995447 gtggcggagggggacgcggagg 995468
>gb|AC006132.1|AC006132 Homo sapiens chromosome 19, cosmid R28204, complete sequence Length = 41572 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 tccacccccaccccctctgtct 85 |||||||||||||||||||||| Sbjct: 4229 tccacccccaccccctctgtct 4250
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 ggcgcacgcctcctccgccgcc 213 |||||||||||||||||||||| Sbjct: 2036005 ggcgcacgcctcctccgccgcc 2036026
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 113 caccgccgccagcccccctccc 134 |||||||||||||||||||||| Sbjct: 24929689 caccgccgccagcccccctccc 24929668
>emb|AL805911.6| Mouse DNA sequence from clone RP23-71K8 on chromosome X, complete sequence Length = 157092 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 ccccttttccacccccaccccc 78 |||||||||||||||||||||| Sbjct: 55292 ccccttttccacccccaccccc 55271
>gb|AC112938.11| Mus musculus chromosome 5, clone RP24-72E12, complete sequence Length = 235924 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 cccttttccacccccaccccc 78 ||||||||||||||||||||| Sbjct: 38048 cccttttccacccccaccccc 38028
>gb|AC127692.4| Mus musculus BAC clone RP23-49P3 from chromosome 5, complete sequence Length = 243940 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 cccttttccacccccaccccc 78 ||||||||||||||||||||| Sbjct: 47653 cccttttccacccccaccccc 47673
>emb|CR956354.1| Wallaby DNA sequence from clone GRWB-143H14, complete sequence Length = 120769 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 cccttttccacccccaccccc 78 ||||||||||||||||||||| Sbjct: 92317 cccttttccacccccaccccc 92337
>gb|AC091503.2| Rattus norvegicus strain Brown Norway clone RP31-446A15, complete sequence Length = 178963 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacccccaccccctctgtctctcc 89 ||||||||||||||||| ||||||| Sbjct: 83078 ccacccccaccccctctctctctcc 83102
>ref|XM_775139.1| PREDICTED: Strongylocentrotus purpuratus similar to solute carrier family 35, member F4 (LOC574755), mRNA Length = 1440 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 aaaccgccctccacctgctgc 160 ||||||||||||||||||||| Sbjct: 307 aaaccgccctccacctgctgc 327
>gb|AC153517.8| Mus musculus 10 BAC RP23-22E18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203981 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 cagccagcccctccacccaag 192 ||||||||||||||||||||| Sbjct: 174593 cagccagcccctccacccaag 174573
>gb|AF256823.1|AF256823 Salmo salar clone BHMS496 microsatellite sequence Length = 479 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 caccccctctgtctctcctct 92 ||||||||||||||||||||| Sbjct: 123 caccccctctgtctctcctct 143
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 tcaactgaatccccatgcccc 250 ||||||||||||||||||||| Sbjct: 30003360 tcaactgaatccccatgcccc 30003380
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 tcaactgaatccccatgcccc 250 ||||||||||||||||||||| Sbjct: 103636 tcaactgaatccccatgcccc 103656
>emb|BX322568.13| Zebrafish DNA sequence from clone DKEY-38N4 in linkage group 22, complete sequence Length = 134716 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cccccaccccctctgtctctc 88 ||||||||||||||||||||| Sbjct: 98748 cccccaccccctctgtctctc 98768
>dbj|AP002090.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1173D11 Length = 170188 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 tccacccccaccccctctgtc 84 ||||||||||||||||||||| Sbjct: 86108 tccacccccaccccctctgtc 86088
>gb|AC122767.16| Mus musculus chromosome 7, clone RP24-143L4, complete sequence Length = 192484 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cccccaccccctctgtctctc 88 ||||||||||||||||||||| Sbjct: 38696 cccccaccccctctgtctctc 38716
>gb|AC112139.31| Mus musculus strain C57BL/6J clone rp23-170m6 map 6, complete sequence Length = 203032 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 ccccttttccacccccaccccctc 80 |||||| ||||||||||||||||| Sbjct: 184292 ccccttgtccacccccaccccctc 184269
>gb|AC150389.2| Branchiostoma floridae clone CH302-114C5, complete sequence Length = 192476 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cagcccccctccccactgaa 141 |||||||||||||||||||| Sbjct: 112017 cagcccccctccccactgaa 112036
>gb|AC116393.10| Mus musculus chromosome 15, clone RP23-94I16, complete sequence Length = 217156 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ttccacccccaccccctctg 82 |||||||||||||||||||| Sbjct: 133227 ttccacccccaccccctctg 133246
>gb|AC044864.6| Mus musculus chromosome 3, clone RP23-168E14, complete sequence Length = 224119 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cccttttccacccccacccc 77 |||||||||||||||||||| Sbjct: 89457 cccttttccacccccacccc 89476
>gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosome 6, complete sequence Length = 195587 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 ccccttttccacccccaccccctc 80 |||||| ||||||||||||||||| Sbjct: 25931 ccccttgtccacccccaccccctc 25908
>gb|AC116051.4| Mus musculus BAC clone RP23-4L11 from 3, complete sequence Length = 224674 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cccttttccacccccacccc 77 |||||||||||||||||||| Sbjct: 146590 cccttttccacccccacccc 146609
>emb|Z98743.1|HS181C9 Human DNA sequence from clone RP1-181C9 on chromosome 22q13.2-13.33, complete sequence Length = 92472 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 ggagggggacgcggaggccccgcc 305 |||||||| ||||||||||||||| Sbjct: 37805 ggagggggccgcggaggccccgcc 37782
>emb|AL365204.11| Human DNA sequence from clone RP11-321L2 on chromosome 9 Contains the 3' end of a novel gene, a novel gene and a CpG island, complete sequence Length = 129191 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ttttccacccccaccccctc 80 |||||||||||||||||||| Sbjct: 16978 ttttccacccccaccccctc 16959
>gb|AC018629.12| Homo sapiens chromosome 17, clone RP11-58O9, complete sequence Length = 166234 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ttccacccccaccccctctg 82 |||||||||||||||||||| Sbjct: 141050 ttccacccccaccccctctg 141069
>emb|AL137855.10| Human DNA sequence from clone RP5-1064J9 on chromosome 1p32.2-33, complete sequence Length = 106970 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tctgtctctcctctgtactc 98 |||||||||||||||||||| Sbjct: 60451 tctgtctctcctctgtactc 60470
>gb|AC074335.11| Mus Musculus Strain C57BL6/J Chromosome 18 BAC, RP23-127B9, complete sequence Length = 201643 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cccccaccccctctgtctct 87 |||||||||||||||||||| Sbjct: 126268 cccccaccccctctgtctct 126287
>emb|AL831791.5| Zebrafish DNA sequence from clone DKEY-76P14 in linkage group 11 Contains a novel gene similar to human and rodent RRAD (Ras-related protein associated with diabetes), a novel gene, a novel gene similar to mouse PNP (purine-nucleoside phosphorylase), a novel gene similar to human and rodent SOX11 (SRY (sex determining region Y)-box 11) and a CpG island, complete sequence Length = 204498 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 caccccctctgtctctcctctgta 95 |||||||||||||||||| ||||| Sbjct: 168640 caccccctctgtctctccactgta 168663
>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster Length = 89976 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gtggcggagggggacgcgga 296 |||||||||||||||||||| Sbjct: 15326 gtggcggagggggacgcgga 15345
>emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for biosynthesis of glycopeptide antibiotic teicoplanin Length = 89713 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gtggcggagggggacgcgga 296 |||||||||||||||||||| Sbjct: 21933 gtggcggagggggacgcgga 21952
>gb|AC016044.11| Homo sapiens chromosome 15 clone RP11-209K10 map 15q21.3, complete sequence Length = 168125 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 cccccaccccctctgtctctcctc 91 |||||||||||||||| ||||||| Sbjct: 72936 cccccaccccctctgtttctcctc 72913
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cgccgctgccgccagccagc 179 |||||||||||||||||||| Sbjct: 668930 cgccgctgccgccagccagc 668949
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 cgccagccaagggggttcag 229 |||||||||||||||||||| Sbjct: 4233381 cgccagccaagggggttcag 4233362
>ref|NM_169422.1| Drosophila melanogaster CG6923-RB, transcript variant B (CG6923), mRNA Length = 4364 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 cccccgctacgtccgcccccgatgcccc 275 ||||||| || ||||||||||||||||| Sbjct: 2327 cccccgccacctccgcccccgatgcccc 2354
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cccactgaaaccgccctcca 152 |||||||||||||||||||| Sbjct: 774053 cccactgaaaccgccctcca 774034
>ref|NM_141855.2| Drosophila melanogaster CG6923-RA, transcript variant A (CG6923), mRNA Length = 4521 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 cccccgctacgtccgcccccgatgcccc 275 ||||||| || ||||||||||||||||| Sbjct: 2484 cccccgccacctccgcccccgatgcccc 2511
>gb|AY058520.1| Drosophila melanogaster LD22771 full length cDNA Length = 4531 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 cccccgctacgtccgcccccgatgcccc 275 ||||||| || ||||||||||||||||| Sbjct: 2463 cccccgccacctccgcccccgatgcccc 2490
>emb|CR389549.1| Gallus gallus finished cDNA, clone ChEST866a14 Length = 1006 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ttttccacccccaccccctc 80 |||||||||||||||||||| Sbjct: 925 ttttccacccccaccccctc 906
>tpg|BK005636.1| TPA: TPA_exp: Homo sapiens proline rich protein 5 variant 2 isoform 3 (PRR5) mRNA, complete cds Length = 1726 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 ggagggggacgcggaggccccgcc 305 |||||||| ||||||||||||||| Sbjct: 182 ggagggggccgcggaggccccgcc 159
>tpg|BK005635.1| TPA: TPA_exp: Homo sapiens proline rich protein 5 variant 1 isoform 2 (PRR5) mRNA, complete cds Length = 1843 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 ggagggggacgcggaggccccgcc 305 |||||||| ||||||||||||||| Sbjct: 182 ggagggggccgcggaggccccgcc 159
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 tccacctgctgcgccgctgc 168 |||||||||||||||||||| Sbjct: 30343085 tccacctgctgcgccgctgc 30343104
>emb|BX908741.7| Mouse DNA sequence from clone RP23-189F6 on chromosome 2, complete sequence Length = 139484 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 ccacccccaccccctctgtc 84 |||||||||||||||||||| Sbjct: 4514 ccacccccaccccctctgtc 4495
>gb|AC007805.5|AC007805 Drosophila melanogaster, chromosome 3R, region 86F-86F, BAC clone BACR11G22, complete sequence Length = 170324 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 cccccgctacgtccgcccccgatgcccc 275 ||||||| || ||||||||||||||||| Sbjct: 120068 cccccgccacctccgcccccgatgcccc 120041
>gb|AC068282.8| Homo sapiens BAC clone RP11-314L11 from 2, complete sequence Length = 205342 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ccgccgccagcccccctccc 134 |||||||||||||||||||| Sbjct: 68434 ccgccgccagcccccctccc 68453
>emb|AL805898.11| Mouse DNA sequence from clone RP23-432F24 on chromosome 4, complete sequence Length = 215828 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 57 ccccttttccacccccaccccctctgtc 84 ||||||||||| |||| ||||||||||| Sbjct: 31194 ccccttttccatcccccccccctctgtc 31167
>emb|AL954170.4| Mouse DNA sequence from clone RP23-467H15 on chromosome 2, complete sequence Length = 138152 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 ccacccccaccccctctgtc 84 |||||||||||||||||||| Sbjct: 2519 ccacccccaccccctctgtc 2500
>gb|AE003692.3| Drosophila melanogaster chromosome 3R, section 30 of 118 of the complete sequence Length = 227847 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 cccccgctacgtccgcccccgatgcccc 275 ||||||| || ||||||||||||||||| Sbjct: 223348 cccccgccacctccgcccccgatgcccc 223321
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 tccacctgctgcgccgctgc 168 |||||||||||||||||||| Sbjct: 92981 tccacctgctgcgccgctgc 93000
>gb|AC154735.2| Mus musculus BAC clone RP24-383B6 from chromosome 16, complete sequence Length = 224440 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ccccttttccacccccaccc 76 |||||||||||||||||||| Sbjct: 96163 ccccttttccacccccaccc 96144
>emb|AL591390.8| Mouse DNA sequence from clone RP23-355L10 on chromosome 11, complete sequence Length = 186134 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gccagccagcccctccaccc 189 |||||||||||||||||||| Sbjct: 133888 gccagccagcccctccaccc 133907
>emb|AL928593.4| Mouse DNA sequence from clone RP23-100E9 on chromosome 2, complete sequence Length = 195840 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 accccttttccacccccaccccctctgt 83 ||||| ||||||||||||||||| |||| Sbjct: 137886 accccatttccacccccacccccactgt 137913 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,306,260 Number of Sequences: 3902068 Number of extensions: 3306260 Number of successful extensions: 109710 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108901 Number of HSP's gapped (non-prelim): 809 length of query: 373 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 351 effective length of database: 17,147,199,772 effective search space: 6018667119972 effective search space used: 6018667119972 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
