ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl54g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483828.1| Oryza sativa (japonica cultivar-group), mRNA 200 3e-48
2dbj|AK071244.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 3e-48
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
4dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
5dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
6ref|XM_483401.1| Oryza sativa (japonica cultivar-group), mRNA 90 8e-15
7dbj|AK063901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 8e-15
8dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
9dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
10gb|AY019946.1| Oryza sativa microsatellite MRG2271 containing (C... 50 0.007
11ref|NM_101446.2| Arabidopsis thaliana unknown protein AT1G15780 ... 48 0.026
12ref|NM_101447.3| Arabidopsis thaliana unknown protein AT1G15790 ... 46 0.10
13ref|NM_202108.1| Arabidopsis thaliana unknown protein AT1G15790 ... 46 0.10
14ref|NM_196722.1| Oryza sativa (japonica cultivar-group) unknown ... 46 0.10
15gb|AC005050.3| Homo sapiens BAC clone CTB-30L5 from 7, complete ... 46 0.10
16gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 46 0.10
17gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.10
18gb|AF332424.1| Arabidopsis thaliana clone C00094 (e) unknown pro... 46 0.10
19dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
20dbj|AK121209.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
21gb|AC024796.1| Caenorhabditis elegans cosmid Y48G1C, complete se... 46 0.10
22gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.10
23gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
24gb|AC091652.4| Homo sapiens BAC clone RP11-26I6 from 7, complete... 44 0.41
25emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 44 0.41
26dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
27emb|AJ342773.1|HSA342773 Homo sapiens genomic sequence surroundi... 44 0.41
28emb|AJ343409.1|HSA343409 Homo sapiens genomic sequence surroundi... 44 0.41
29emb|AJ343381.1|HSA343381 Homo sapiens genomic sequence surroundi... 44 0.41
30gb|AC159413.1| Trypanosoma brucei chromosome 7 clone RPCI93-22O1... 42 1.6
31gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence 42 1.6
32gb|AC159433.1| Trypanosoma brucei chromosome 7 clone RPCI93-28I8... 42 1.6
33gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence 42 1.6
34gb|AY425635.1| Psora himalayana voucher M-0066792 18S ribosomal ... 42 1.6
35ref|XM_532944.2| PREDICTED: Canis familiaris hypothetical LOC130... 42 1.6
36gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's H... 42 1.6
37dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.6
38gb|CP000036.1| Shigella boydii Sb227, complete genome 42 1.6
39gb|CP000038.1| Shigella sonnei Ss046, complete genome 42 1.6
40ref|NM_188489.1| Oryza sativa (japonica cultivar-group), predic... 40 6.4
41ref|XM_636146.1| Dictyostelium discoideum hypothetical protein (... 40 6.4
42ref|XM_483400.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
43ref|XM_483294.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
44ref|XM_483293.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
45ref|XM_464837.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
46ref|NM_195914.1| Oryza sativa (japonica cultivar-group) putative... 40 6.4
47ref|XM_517369.1| PREDICTED: Pan troglodytes similar to nuclear f... 40 6.4
48gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
49gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
50gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
51gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
52gb|AE008632.1| Rickettsia conorii str. Malish 7, section 64 of 1... 40 6.4
53gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 6.4
54gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
55ref|NM_003998.2| Homo sapiens nuclear factor of kappa light poly... 40 6.4
56ref|NM_006699.3| Homo sapiens mannosidase, alpha, class 1A, memb... 40 6.4
57gb|AC125122.4| Mus musculus BAC clone RP24-269O4 from chromosome... 40 6.4
58ref|XM_807910.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.4
59ref|XM_810534.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.4
60gb|AY222860.1| Hordeum vulgare homogentisic acid geranylgeranyl ... 40 6.4
61gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.4
62gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.4
63emb|AL358072.21| Human DNA sequence from clone RP11-188D8 on chr... 40 6.4
64gb|AC091091.2| Gallus gallus clone WAG-93J15, complete sequence 40 6.4
65emb|AL035460.15|HS860F19 Human DNA sequence from clone RP5-860F1... 40 6.4
66gb|BC052954.1| Homo sapiens mannosidase, alpha, class 1A, member... 40 6.4
67gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 6.4
68gb|AC155261.3| Mus musculus BAC clone RP24-66D10 from chromosome... 40 6.4
69emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.4
70gb|AC091666.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
71emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.4
72gb|BC051765.1| Homo sapiens nuclear factor of kappa light polype... 40 6.4
73gb|BC033210.1| Homo sapiens nuclear factor of kappa light polype... 40 6.4
74emb|CR749522.1| Homo sapiens mRNA; cDNA DKFZp686C01211 (from clo... 40 6.4
75dbj|AK122850.1| Homo sapiens cDNA FLJ16470 fis, clone BRHIP30091... 40 6.4
76gb|AE012180.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.4
77ref|XM_938882.1| PREDICTED: Homo sapiens KIAA1442 protein (KIAA1... 40 6.4
78ref|XM_044921.6| PREDICTED: Homo sapiens KIAA1442 protein (KIAA1... 40 6.4
79gb|AC021120.6| Homo sapiens BAC clone RP11-347O8 from 4, complet... 40 6.4
80emb|CR387086.1| Gallus gallus finished cDNA, clone ChEST498b13 40 6.4
81gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.4
82gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome 40 6.4
83emb|BX936285.5| Mouse DNA sequence from clone RP23-162H12 on chr... 40 6.4
84dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
85dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
86dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
87dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
88dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
89dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
90emb|BX817659.1|CNS0AEC5 Arabidopsis thaliana Full-length cDNA Co... 40 6.4
91dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DN... 40 6.4
92gb|AY223820.1| Homo sapiens nuclear factor of kappa light polype... 40 6.4
93gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.4
94dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
95dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
96dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
97dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
98dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
99dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
100dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
101dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
102dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
103dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
104emb|AL831750.8| Mouse DNA sequence from clone RP23-37L2 on chrom... 40 6.4
105dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
106gb|AF213884.1|AF213884S1 Homo sapiens nuclear factor of kappa li... 40 6.4
107dbj|AK111165.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
108dbj|AK111116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
109dbj|AK109524.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
110dbj|AK109472.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
111dbj|AK105193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
112dbj|AK101254.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
113dbj|AK099033.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
114dbj|AK071999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
115gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
116emb|CT009570.9| Zebrafish DNA sequence from clone CH211-185J11 i... 40 6.4
117dbj|AP000864.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.4
118emb|Z47743.1|HSNFX23 H.sapiens NFKB1 gene, exon 23 40 6.4
119gb|M55643.1|HUMNFKB34 Human factor KBF1 mRNA, complete cds 40 6.4
120gb|M58603.1|HUMNFKB Human nuclear factor kappa-B DNA binding sub... 40 6.4 
>ref|XM_483828.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4423

 Score =  200 bits (101), Expect = 3e-48
 Identities = 209/245 (85%)
 Strand = Plus / Plus

                                                                       
Query: 114 tggcgcgcccagctccagcccgaggcgcgtagcaggatcgtcaataagataatggaaact 173
           |||||| ||||||||||| | ||||| || | |||||||||||| ||||||||||| |||
Sbjct: 252 tggcgctcccagctccagtcggaggcccgcaacaggatcgtcaacaagataatggacact 311

                                                                       
Query: 174 ctcaagaagcatctgccagtatctgtgccagagggactcaacgaacttcaagaaatcgct 233
           || ||||||||||| |||||||| ||||| |||||  | || ||||||||| | || || 
Sbjct: 312 ctgaagaagcatctaccagtatcagtgcctgaggggttgaatgaacttcaaaagatagca 371

                                                                       
Query: 234 gtcagattcgaagagaagatctatactgcagcaaccaatcagtctgattatttgcggaag 293
           ||  |||| |||||||| |||||||||||||| ||||  ||||||||||| |||||||||
Sbjct: 372 gtgcgatttgaagagaaaatctatactgcagccaccagccagtctgattacttgcggaag 431

                                                                       
Query: 294 atttctctgaaaatgctctctatggagacgaagacacaacaagctcctggaaatgctcaa 353
           |||||||| |||||||||||||||||||| ||||| |||||   ||||||||| || |||
Sbjct: 432 atttctctaaaaatgctctctatggagacaaagactcaacagaatcctggaaacgcccaa 491

                
Query: 354 gtgat 358
           |||||
Sbjct: 492 gtgat 496



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 432 ttgatgtctcagcaacaggcccggcagccaaat 464
           |||||||||||||||||||||||||||||||||
Sbjct: 573 ttgatgtctcagcaacaggcccggcagccaaat 605



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 29  caactggcggcccacccaagggtcggaccccgccgc 64
           ||||||| |||||||||| ||| | |||||||||||
Sbjct: 164 caactggaggcccacccagggggccgaccccgccgc 199
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>dbj|AK071244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088K02, full
           insert sequence
          Length = 4423

 Score =  200 bits (101), Expect = 3e-48
 Identities = 209/245 (85%)
 Strand = Plus / Plus

                                                                       
Query: 114 tggcgcgcccagctccagcccgaggcgcgtagcaggatcgtcaataagataatggaaact 173
           |||||| ||||||||||| | ||||| || | |||||||||||| ||||||||||| |||
Sbjct: 252 tggcgctcccagctccagtcggaggcccgcaacaggatcgtcaacaagataatggacact 311

                                                                       
Query: 174 ctcaagaagcatctgccagtatctgtgccagagggactcaacgaacttcaagaaatcgct 233
           || ||||||||||| |||||||| ||||| |||||  | || ||||||||| | || || 
Sbjct: 312 ctgaagaagcatctaccagtatcagtgcctgaggggttgaatgaacttcaaaagatagca 371

                                                                       
Query: 234 gtcagattcgaagagaagatctatactgcagcaaccaatcagtctgattatttgcggaag 293
           ||  |||| |||||||| |||||||||||||| ||||  ||||||||||| |||||||||
Sbjct: 372 gtgcgatttgaagagaaaatctatactgcagccaccagccagtctgattacttgcggaag 431

                                                                       
Query: 294 atttctctgaaaatgctctctatggagacgaagacacaacaagctcctggaaatgctcaa 353
           |||||||| |||||||||||||||||||| ||||| |||||   ||||||||| || |||
Sbjct: 432 atttctctaaaaatgctctctatggagacaaagactcaacagaatcctggaaacgcccaa 491

                
Query: 354 gtgat 358
           |||||
Sbjct: 492 gtgat 496



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 432 ttgatgtctcagcaacaggcccggcagccaaat 464
           |||||||||||||||||||||||||||||||||
Sbjct: 573 ttgatgtctcagcaacaggcccggcagccaaat 605



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 29  caactggcggcccacccaagggtcggaccccgccgc 64
           ||||||| |||||||||| ||| | |||||||||||
Sbjct: 164 caactggaggcccacccagggggccgaccccgccgc 199
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 77/86 (89%)
 Strand = Plus / Minus

                                                                            
Query: 273      cagtctgattatttgcggaagatttctctgaaaatgctctctatggagacgaagacacaa 332
                ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| |||
Sbjct: 28296032 cagtctgattacttgcggaagatttctctaaaaatgctctctatggagacaaagactcaa 28295973

                                          
Query: 333      caagctcctggaaatgctcaagtgat 358
                ||   ||||||||| || ||||||||
Sbjct: 28295972 cagaatcctggaaacgcccaagtgat 28295947



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                            
Query: 273      cagtctgattatttgcggaagatttctctgaaaatgctctctatggagacgaagacacaa 332
                ||||||||||| ||||||||| | ||||| |||||||||||| ||||||| ||||| |||
Sbjct: 26019693 cagtctgattacttgcggaagttgtctctaaaaatgctctctttggagacaaagactcaa 26019752

                                          
Query: 333      caagctcctggaaatgctcaagtgat 358
                ||   ||||||||| || ||||||||
Sbjct: 26019753 cagagtcctggaaacgcccaagtgat 26019778



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                            
Query: 164      aatggaaactctcaagaagcatctgccagtatctgtgccagagggactcaacgaacttca 223
                |||||| ||||| ||||||||||| |||||||| ||||| |||||  | || ||||||||
Sbjct: 28297007 aatggacactctgaagaagcatctaccagtatcagtgcctgaggggttgaatgaacttca 28296948

                                                               
Query: 224      agaaatcgctgtcagattcgaagagaagatctatactgcagcaacca 270
                | | || || ||  |||| |||||||| |||||||||||||| ||||
Sbjct: 28296947 aaagatagcagtgcgatttgaagagaaaatctatactgcagccacca 28296901



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                                 
Query: 432      ttgatgtctcagcaacaggcccggcagccaaat 464
                |||||||||||||||||||||||||||||||||
Sbjct: 28294342 ttgatgtctcagcaacaggcccggcagccaaat 28294310



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                            
Query: 166      tggaaactctcaagaagcatctgccagtatctgtgccagagggactcaacgaacttcaag 225
                |||| ||||| ||||||||||| |||||||| | ||| ||||| || || ||||||||| 
Sbjct: 26018748 tggagactctgaagaagcatctaccagtatcagggcctgaggggctgaatgaacttcaaa 26018807

                                                             
Query: 226      aaatcgctgtcagattcgaagagaagatctatactgcagcaacca 270
                |  | || ||  |||| |||||||| |||||||||| ||| ||||
Sbjct: 26018808 agttagcagtgcgatttgaagagaaaatctatactggagccacca 26018852



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                  
Query: 114      tggcgcgcccagctccagcccgaggcgcgtagcaggatcgtcaataagat 163
                |||||| ||||||||||| | ||||| || | |||||||||||| |||||
Sbjct: 28297849 tggcgctcccagctccagtcggaggcccgcaacaggatcgtcaacaagat 28297800



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 29       caactggcggcccacccaagggtcggaccccgccgc 64
                ||||||| |||||||||| ||| | |||||||||||
Sbjct: 28297937 caactggaggcccacccagggggccgaccccgccgc 28297902



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 29       caactggcggcccacccaagggtcggaccccgccgc 64
                ||||||| |||||||||| ||| | |||||||||||
Sbjct: 26017647 caactggaggcccacccagggggccgaccccgccgc 26017682



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 52       cggaccccgccgcggccgccgccg 75
                ||||||||||||| ||||||||||
Sbjct: 25321875 cggaccccgccgccgccgccgccg 25321898
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0044E16
          Length = 153296

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 77/86 (89%)
 Strand = Plus / Minus

                                                                         
Query: 273   cagtctgattatttgcggaagatttctctgaaaatgctctctatggagacgaagacacaa 332
             ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| |||
Sbjct: 24838 cagtctgattacttgcggaagatttctctaaaaatgctctctatggagacaaagactcaa 24779

                                       
Query: 333   caagctcctggaaatgctcaagtgat 358
             ||   ||||||||| || ||||||||
Sbjct: 24778 cagaatcctggaaacgcccaagtgat 24753



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                         
Query: 164   aatggaaactctcaagaagcatctgccagtatctgtgccagagggactcaacgaacttca 223
             |||||| ||||| ||||||||||| |||||||| ||||| |||||  | || ||||||||
Sbjct: 25813 aatggacactctgaagaagcatctaccagtatcagtgcctgaggggttgaatgaacttca 25754

                                                            
Query: 224   agaaatcgctgtcagattcgaagagaagatctatactgcagcaacca 270
             | | || || ||  |||| |||||||| |||||||||||||| ||||
Sbjct: 25753 aaagatagcagtgcgatttgaagagaaaatctatactgcagccacca 25707



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                              
Query: 432   ttgatgtctcagcaacaggcccggcagccaaat 464
             |||||||||||||||||||||||||||||||||
Sbjct: 23148 ttgatgtctcagcaacaggcccggcagccaaat 23116



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 114   tggcgcgcccagctccagcccgaggcgcgtagcaggatcgtcaataagat 163
             |||||| ||||||||||| | ||||| || | |||||||||||| |||||
Sbjct: 26655 tggcgctcccagctccagtcggaggcccgcaacaggatcgtcaacaagat 26606



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 29    caactggcggcccacccaagggtcggaccccgccgc 64
             ||||||| |||||||||| ||| | |||||||||||
Sbjct: 26743 caactggaggcccacccagggggccgaccccgccgc 26708
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>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0705A05
          Length = 143765

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 77/86 (89%)
 Strand = Plus / Minus

                                                                         
Query: 273   cagtctgattatttgcggaagatttctctgaaaatgctctctatggagacgaagacacaa 332
             ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| |||
Sbjct: 87847 cagtctgattacttgcggaagatttctctaaaaatgctctctatggagacaaagactcaa 87788

                                       
Query: 333   caagctcctggaaatgctcaagtgat 358
             ||   ||||||||| || ||||||||
Sbjct: 87787 cagaatcctggaaacgcccaagtgat 87762



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                         
Query: 164   aatggaaactctcaagaagcatctgccagtatctgtgccagagggactcaacgaacttca 223
             |||||| ||||| ||||||||||| |||||||| ||||| |||||  | || ||||||||
Sbjct: 88822 aatggacactctgaagaagcatctaccagtatcagtgcctgaggggttgaatgaacttca 88763

                                                            
Query: 224   agaaatcgctgtcagattcgaagagaagatctatactgcagcaacca 270
             | | || || ||  |||| |||||||| |||||||||||||| ||||
Sbjct: 88762 aaagatagcagtgcgatttgaagagaaaatctatactgcagccacca 88716



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                              
Query: 432   ttgatgtctcagcaacaggcccggcagccaaat 464
             |||||||||||||||||||||||||||||||||
Sbjct: 86157 ttgatgtctcagcaacaggcccggcagccaaat 86125



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 114   tggcgcgcccagctccagcccgaggcgcgtagcaggatcgtcaataagat 163
             |||||| ||||||||||| | ||||| || | |||||||||||| |||||
Sbjct: 89664 tggcgctcccagctccagtcggaggcccgcaacaggatcgtcaacaagat 89615



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 29    caactggcggcccacccaagggtcggaccccgccgc 64
             ||||||| |||||||||| ||| | |||||||||||
Sbjct: 89752 caactggaggcccacccagggggccgaccccgccgc 89717
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>ref|XM_483401.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 490

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 102/121 (84%)
 Strand = Plus / Plus

                                                                       
Query: 238 gattcgaagagaagatctatactgcagcaaccaatcagtctgattatttgcggaagattt 297
           |||| |||||||| |||||||||| ||| ||||  | ||||||||| ||||||||| | |
Sbjct: 52  gatttgaagagaaaatctatactggagccaccagccggtctgattacttgcggaagttgt 111

                                                                       
Query: 298 ctctgaaaatgctctctatggagacgaagacacaacaagctcctggaaatgctcaagtga 357
           |||| |||||||||||| ||||||| ||||| |||||   ||||||||| || |||||||
Sbjct: 112 ctctaaaaatgctctctttggagacaaagactcaacagagtcctggaaacgcccaagtga 171

            
Query: 358 t 358
           |
Sbjct: 172 t 172
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>dbj|AK063901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-H05, full
           insert sequence
          Length = 490

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 102/121 (84%)
 Strand = Plus / Plus

                                                                       
Query: 238 gattcgaagagaagatctatactgcagcaaccaatcagtctgattatttgcggaagattt 297
           |||| |||||||| |||||||||| ||| ||||  | ||||||||| ||||||||| | |
Sbjct: 52  gatttgaagagaaaatctatactggagccaccagccggtctgattacttgcggaagttgt 111

                                                                       
Query: 298 ctctgaaaatgctctctatggagacgaagacacaacaagctcctggaaatgctcaagtga 357
           |||| |||||||||||| ||||||| ||||| |||||   ||||||||| || |||||||
Sbjct: 112 ctctaaaaatgctctctttggagacaaagactcaacagagtcctggaaacgcccaagtga 171

            
Query: 358 t 358
           |
Sbjct: 172 t 172
to top
>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1186_G01
          Length = 112077

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                         
Query: 273   cagtctgattatttgcggaagatttctctgaaaatgctctctatggagacgaagacacaa 332
             ||||||||||| ||||||||| | ||||| |||||||||||| ||||||| ||||| |||
Sbjct: 55254 cagtctgattacttgcggaagttgtctctaaaaatgctctctttggagacaaagactcaa 55313

                                       
Query: 333   caagctcctggaaatgctcaagtgat 358
             ||   ||||||||| || ||||||||
Sbjct: 55314 cagagtcctggaaacgcccaagtgat 55339



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                         
Query: 166   tggaaactctcaagaagcatctgccagtatctgtgccagagggactcaacgaacttcaag 225
             |||| ||||| ||||||||||| |||||||| | ||| ||||| || || ||||||||| 
Sbjct: 54309 tggagactctgaagaagcatctaccagtatcagggcctgaggggctgaatgaacttcaaa 54368

                                                          
Query: 226   aaatcgctgtcagattcgaagagaagatctatactgcagcaacca 270
             |  | || ||  |||| |||||||| |||||||||| ||| ||||
Sbjct: 54369 agttagcagtgcgatttgaagagaaaatctatactggagccacca 54413



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 29    caactggcggcccacccaagggtcggaccccgccgc 64
             ||||||| |||||||||| ||| | |||||||||||
Sbjct: 53208 caactggaggcccacccagggggccgaccccgccgc 53243
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>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1081_B12
          Length = 124741

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                          
Query: 273    cagtctgattatttgcggaagatttctctgaaaatgctctctatggagacgaagacacaa 332
              ||||||||||| ||||||||| | ||||| |||||||||||| ||||||| ||||| |||
Sbjct: 104570 cagtctgattacttgcggaagttgtctctaaaaatgctctctttggagacaaagactcaa 104629

                                        
Query: 333    caagctcctggaaatgctcaagtgat 358
              ||   ||||||||| || ||||||||
Sbjct: 104630 cagagtcctggaaacgcccaagtgat 104655



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                          
Query: 166    tggaaactctcaagaagcatctgccagtatctgtgccagagggactcaacgaacttcaag 225
              |||| ||||| ||||||||||| |||||||| | ||| ||||| || || ||||||||| 
Sbjct: 103625 tggagactctgaagaagcatctaccagtatcagggcctgaggggctgaatgaacttcaaa 103684

                                                           
Query: 226    aaatcgctgtcagattcgaagagaagatctatactgcagcaacca 270
              |  | || ||  |||| |||||||| |||||||||| ||| ||||
Sbjct: 103685 agttagcagtgcgatttgaagagaaaatctatactggagccacca 103729



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 29     caactggcggcccacccaagggtcggaccccgccgc 64
              ||||||| |||||||||| ||| | |||||||||||
Sbjct: 102524 caactggaggcccacccagggggccgaccccgccgc 102559
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>gb|AY019946.1| Oryza sativa microsatellite MRG2271 containing (CT)X13, closest to
           marker C222, genomic sequence
          Length = 226

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 164 aatggaaactctcaagaagcatctgccagtatctgtgccagaggg 208
           |||||| ||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 181 aatggacactctgaagaagcatctaccagtatcagtgcctgaggg 225
to top
>ref|NM_101446.2| Arabidopsis thaliana unknown protein AT1G15780 mRNA, complete cds
          Length = 4271

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 149 gatcgtcaataagataatggaaactctcaagaagca 184
           ||||||||| |||||||||||||| || ||||||||
Sbjct: 99  gatcgtcaacaagataatggaaacactaaagaagca 134
to top
>ref|NM_101447.3| Arabidopsis thaliana unknown protein AT1G15790 transcript variant
           AT1G15790.1 mRNA, complete cds
          Length = 771

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 150 atcgtcaataagataatggaaac 172
           |||||||||||||||||||||||
Sbjct: 108 atcgtcaataagataatggaaac 130
to top
>ref|NM_202108.1| Arabidopsis thaliana unknown protein AT1G15790 transcript variant
           AT1G15790.2 mRNA, complete cds
          Length = 885

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 150 atcgtcaataagataatggaaac 172
           |||||||||||||||||||||||
Sbjct: 180 atcgtcaataagataatggaaac 202
to top
>ref|NM_196722.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBb0015F09b.1), mRNA
          Length = 2130

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 56  ccccgccgcggccgccgccggtg 78
           |||||||||||||||||||||||
Sbjct: 307 ccccgccgcggccgccgccggtg 285
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>gb|AC005050.3| Homo sapiens BAC clone CTB-30L5 from 7, complete sequence
          Length = 188374

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 427   ttcccttgatgtctcagcaacag 449
             |||||||||||||||||||||||
Sbjct: 70102 ttcccttgatgtctcagcaacag 70080
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 55     accccgccgcggccgccgccggt 77
              |||||||||||||||||||||||
Sbjct: 977205 accccgccgcggccgccgccggt 977227



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 57      cccgccgcggccgccgccgg 76
               ||||||||||||||||||||
Sbjct: 1238253 cccgccgcggccgccgccgg 1238234
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>gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             nbeb0015F09b, complete sequence
          Length = 108964

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 56    ccccgccgcggccgccgccggtg 78
             |||||||||||||||||||||||
Sbjct: 86392 ccccgccgcggccgccgccggtg 86370
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>gb|AF332424.1| Arabidopsis thaliana clone C00094 (e) unknown protein (At1g15790)
           mRNA, complete cds
          Length = 540

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 150 atcgtcaataagataatggaaac 172
           |||||||||||||||||||||||
Sbjct: 55  atcgtcaataagataatggaaac 77
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 56       ccccgccgcggccgccgccggtg 78
                |||||||||||||||||||||||
Sbjct: 15503046 ccccgccgcggccgccgccggtg 15503024



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      accccgccgcggccgccgcc 74
               ||||||||||||||||||||
Sbjct: 9970233 accccgccgcggccgccgcc 9970214
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>dbj|AK121209.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088J18, full
           insert sequence
          Length = 2183

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 56  ccccgccgcggccgccgccggtg 78
           |||||||||||||||||||||||
Sbjct: 387 ccccgccgcggccgccgccggtg 365
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>gb|AC024796.1| Caenorhabditis elegans cosmid Y48G1C, complete sequence
          Length = 60391

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 284   tttgcggaagatttctctgaaaa 306
             |||||||||||||||||||||||
Sbjct: 35112 tttgcggaagatttctctgaaaa 35090
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 56       ccccgccgcggccgccgccggtg 78
                |||||||||||||||||||||||
Sbjct: 15511287 ccccgccgcggccgccgccggtg 15511265



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      accccgccgcggccgccgcc 74
               ||||||||||||||||||||
Sbjct: 9976272 accccgccgcggccgccgcc 9976253
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>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06,
             complete sequence
          Length = 136143

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 54    gaccccgccgcggccgccgccg 75
             ||||||||||||||||||||||
Sbjct: 35978 gaccccgccgcggccgccgccg 35957
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>gb|AC091652.4| Homo sapiens BAC clone RP11-26I6 from 7, complete sequence
          Length = 44121

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 328   cacaacaagctcctggaaatgctcaa 353
             ||||||| ||||||||||||||||||
Sbjct: 14231 cacaacaggctcctggaaatgctcaa 14206
to top
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 53    ggaccccgccgcggccgccgcc 74
             ||||||||||||||||||||||
Sbjct: 43533 ggaccccgccgcggccgccgcc 43554
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 54       gaccccgccgcggccgccgccg 75
                ||||||||||||||||||||||
Sbjct: 17659220 gaccccgccgcggccgccgccg 17659199



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 59       cgccgcggccgccgccggtg 78
                ||||||||||||||||||||
Sbjct: 14864651 cgccgcggccgccgccggtg 14864670
to top
>emb|AJ342773.1|HSA342773 Homo sapiens genomic sequence surrounding NotI site, clone NL6-AG9C
          Length = 722

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 328 cacaacaagctcctggaaatgctcaa 353
           ||||||| ||||||||||||||||||
Sbjct: 380 cacaacaggctcctggaaatgctcaa 355
to top
>emb|AJ343409.1|HSA343409 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NA4C
          Length = 610

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 328 cacaacaagctcctggaaatgctcaa 353
           ||||||| ||||||||||||||||||
Sbjct: 380 cacaacaggctcctggaaatgctcaa 355
to top
>emb|AJ343381.1|HSA343381 Homo sapiens genomic sequence surrounding NotI site, clone NL6-HP7R
          Length = 496

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 328 cacaacaagctcctggaaatgctcaa 353
           ||||||| ||||||||||||||||||
Sbjct: 380 cacaacaggctcctggaaatgctcaa 355
to top
>gb|AC159413.1| Trypanosoma brucei chromosome 7 clone RPCI93-22O10, complete sequence
          Length = 156548

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 399    ggcagcaatcaagcacaaaca 419
              |||||||||||||||||||||
Sbjct: 104681 ggcagcaatcaagcacaaaca 104701
to top
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 399    ggcagcaatcaagcacaaaca 419
              |||||||||||||||||||||
Sbjct: 650222 ggcagcaatcaagcacaaaca 650242
to top
>gb|AC159433.1| Trypanosoma brucei chromosome 7 clone RPCI93-28I8, complete sequence
          Length = 153310

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 399    ggcagcaatcaagcacaaaca 419
              |||||||||||||||||||||
Sbjct: 137022 ggcagcaatcaagcacaaaca 137042
to top
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence
          Length = 279448

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 358    taccaaatcaaaacaactccgctcc 382
              ||||||||||||||||||| |||||
Sbjct: 115922 taccaaatcaaaacaactcggctcc 115946
to top
>gb|AY425635.1| Psora himalayana voucher M-0066792 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1 and 5.8S
           ribosomal RNA gene, complete sequence; and internal
           transcribed spacer 2, partial sequence
          Length = 974

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 353 agtgataccaaatcaaaacaa 373
           |||||||||||||||||||||
Sbjct: 649 agtgataccaaatcaaaacaa 669
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>ref|XM_532944.2| PREDICTED: Canis familiaris hypothetical LOC130733 (LOC475737),
           mRNA
          Length = 1850

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 56  ccccgccgcggccgccgccgg 76
           |||||||||||||||||||||
Sbjct: 201 ccccgccgcggccgccgccgg 181
to top
>gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 221396

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 402    agcaatcaagcacaaacatcagtaa 426
              ||||| |||||||||||||||||||
Sbjct: 216162 agcaagcaagcacaaacatcagtaa 216186
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 9       ctgatcccgaccatggacgcc 29
               |||||||||||||||||||||
Sbjct: 2279623 ctgatcccgaccatggacgcc 2279603
to top
>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 343     gaaatgctcaagtgataccaaatca 367
               |||||||||||||||| ||||||||
Sbjct: 3867682 gaaatgctcaagtgattccaaatca 3867706
to top
>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 343     gaaatgctcaagtgataccaaatca 367
               |||||||||||||||| ||||||||
Sbjct: 4231667 gaaatgctcaagtgattccaaatca 4231691
to top
>ref|NM_188489.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   cccgccgcggccgccgccgg 76
            ||||||||||||||||||||
Sbjct: 1515 cccgccgcggccgccgccgg 1496
to top
>ref|XM_636146.1| Dictyostelium discoideum hypothetical protein (DDB0206373), partial
           mRNA
          Length = 3612

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 tcaagtgataccaaatcaaa 369
           ||||||||||||||||||||
Sbjct: 243 tcaagtgataccaaatcaaa 262
to top
>ref|XM_483400.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 315

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 29  caactggcggcccacccaagggtcggaccccgccgc 64
           ||||||| |||||||||| ||| | |||||||||||
Sbjct: 123 caactggaggcccacccagggggccgaccccgccgc 158
to top
>ref|XM_483294.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 733

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 52  cggaccccgccgcggccgccgccg 75
           ||||||||||||| ||||||||||
Sbjct: 238 cggaccccgccgccgccgccgccg 215
to top
>ref|XM_483293.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2519

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 52  cggaccccgccgcggccgccgccg 75
           ||||||||||||| ||||||||||
Sbjct: 245 cggaccccgccgccgccgccgccg 222
to top
>ref|XM_464837.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 333

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  ccccgccgcggccgccgccg 75
           ||||||||||||||||||||
Sbjct: 164 ccccgccgcggccgccgccg 183
to top
>ref|NM_195914.1| Oryza sativa (japonica cultivar-group) putative formin-like protein
           (OSJNBb0078C13.8), mRNA
          Length = 2550

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  accccgccgcggccgccgcc 74
           ||||||||||||||||||||
Sbjct: 413 accccgccgcggccgccgcc 432
to top
>ref|XM_517369.1| PREDICTED: Pan troglodytes similar to nuclear factor kappa-B, subunit
            1; nuclear factor kappa-B DNA binding subunit; nuclear
            factor NF-kappa-B p50 subunit; DNA binding factor KBF1
            (LOC461406), mRNA
          Length = 3183

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  ctgcctccacaaggcagcaa 406
            ||||||||||||||||||||
Sbjct: 2999 ctgcctccacaaggcagcaa 3018
to top
>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03,
             complete sequence
          Length = 146278

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    cgccgcggccgccgccggtg 78
             ||||||||||||||||||||
Sbjct: 15566 cgccgcggccgccgccggtg 15585
to top
>gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0109A13, complete sequence
          Length = 134258

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    cgccgcggccgccgccggtg 78
             ||||||||||||||||||||
Sbjct: 90993 cgccgcggccgccgccggtg 91012
to top
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0025K21, complete sequence
          Length = 146539

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ccccgccgcggccgccgccg 75
             ||||||||||||||||||||
Sbjct: 73181 ccccgccgcggccgccgccg 73162
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>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10,
             complete sequence
          Length = 157609

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ccccgccgcggccgccgccg 75
             ||||||||||||||||||||
Sbjct: 99174 ccccgccgcggccgccgccg 99155
to top
>gb|AE008632.1| Rickettsia conorii str. Malish 7, section 64 of 114 of the complete
            genome
          Length = 11428

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                        
Query: 283  atttgcggaagatttctctgaaaatgct 310
            ||||||||||||||||||| ||||||||
Sbjct: 4586 atttgcggaagatttctct-aaaatgct 4560
to top
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 60      gccgcggccgccgccggtgttgac 83
               ||||||||||||||||||| ||||
Sbjct: 1034582 gccgcggccgccgccggtgatgac 1034605
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>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0028C22, complete sequence
          Length = 154228

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    cgccgcggccgccgccggtg 78
             ||||||||||||||||||||
Sbjct: 29364 cgccgcggccgccgccggtg 29345
to top
>ref|NM_003998.2| Homo sapiens nuclear factor of kappa light polypeptide gene enhancer
            in B-cells 1 (p105) (NFKB1), mRNA
          Length = 4104

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  ctgcctccacaaggcagcaa 406
            ||||||||||||||||||||
Sbjct: 3193 ctgcctccacaaggcagcaa 3212
to top
>ref|NM_006699.3| Homo sapiens mannosidase, alpha, class 1A, member 2 (MAN1A2),
          mRNA
          Length = 5388

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 58 ccgccgcggccgccgccggtgttg 81
          |||||||||||||||||| |||||
Sbjct: 25 ccgccgcggccgccgccgctgttg 2
to top
>gb|AC125122.4| Mus musculus BAC clone RP24-269O4 from chromosome 18, complete sequence
          Length = 173614

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    tgctctctatggagacgaag 326
              ||||||||||||||||||||
Sbjct: 156906 tgctctctatggagacgaag 156887
to top
>ref|XM_807910.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507623.30) partial mRNA
          Length = 2754

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  atggaaactctcaagaagca 184
            ||||||||||||||||||||
Sbjct: 2194 atggaaactctcaagaagca 2213
to top
>ref|XM_810534.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053505943.40) partial mRNA
          Length = 2754

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  atggaaactctcaagaagca 184
            ||||||||||||||||||||
Sbjct: 2194 atggaaactctcaagaagca 2213
to top
>gb|AY222860.1| Hordeum vulgare homogentisic acid geranylgeranyl transferase
          mRNA, complete cds
          Length = 1412

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 56 ccccgccgcggccgccgccg 75
          ||||||||||||||||||||
Sbjct: 95 ccccgccgcggccgccgccg 76
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    gcgcccagctccagcccgag 137
              ||||||||||||||||||||
Sbjct: 260826 gcgcccagctccagcccgag 260845
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 58      ccgccgcggccgccgccggtgttg 81
               |||| |||||||||||||||||||
Sbjct: 3161768 ccgcggcggccgccgccggtgttg 3161745
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>emb|AL358072.21| Human DNA sequence from clone RP11-188D8 on chromosome 1 Contains the
            5' end of the MAN1A2 gene for mannosidase alpha class 1A
            member 2 and two CpG islands, complete sequence
          Length = 129725

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 58   ccgccgcggccgccgccggtgttg 81
            |||||||||||||||||| |||||
Sbjct: 8754 ccgccgcggccgccgccgctgttg 8731
to top
>gb|AC091091.2| Gallus gallus clone WAG-93J15, complete sequence
          Length = 136822

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    gcgcgcccagctccagcccg 135
              ||||||||||||||||||||
Sbjct: 105876 gcgcgcccagctccagcccg 105895
to top
>emb|AL035460.15|HS860F19 Human DNA sequence from clone RP5-860F19 on chromosome 20p12.3-13
            Contains the gene for a novel protein (KIAA1442), the
            RPL19P1 gene for ribosomal protein L19 pseudogene 1, the
            CPX-1 gene for metallocarboxypeptidase, the C20orf141
            gene, a novel gene and four CpG islands, complete
            sequence
          Length = 135005

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   ccccgccgcggccgccgccg 75
            ||||||||||||||||||||
Sbjct: 8488 ccccgccgcggccgccgccg 8469
to top
>gb|BC052954.1| Homo sapiens mannosidase, alpha, class 1A, member 2, mRNA (cDNA
          clone IMAGE:5264139), partial cds
          Length = 6263

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 58 ccgccgcggccgccgccggtgttg 81
          |||||||||||||||||| |||||
Sbjct: 41 ccgccgcggccgccgccgctgttg 18
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 8       gctgatcccgaccatggacg 27
               ||||||||||||||||||||
Sbjct: 2454224 gctgatcccgaccatggacg 2454243
to top
>gb|AC155261.3| Mus musculus BAC clone RP24-66D10 from chromosome 18, complete sequence
          Length = 207400

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    tgctctctatggagacgaag 326
              ||||||||||||||||||||
Sbjct: 183304 tgctctctatggagacgaag 183323
to top
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 60  gccgcggccgccgccggtgttgac 83
           ||||||||||||||||||| ||||
Sbjct: 782 gccgcggccgccgccggtgatgac 805
to top
>gb|AC091666.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0078C13, complete sequence
          Length = 140553

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    accccgccgcggccgccgcc 74
             ||||||||||||||||||||
Sbjct: 63722 accccgccgcggccgccgcc 63741
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>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             4/14
          Length = 327650

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 60    gccgcggccgccgccggtgttgac 83
             ||||||||||||||||||| ||||
Sbjct: 48034 gccgcggccgccgccggtgatgac 48057
to top
>gb|BC051765.1| Homo sapiens nuclear factor of kappa light polypeptide gene enhancer
            in B-cells 1 (p105), mRNA (cDNA clone MGC:54151
            IMAGE:6500087), complete cds
          Length = 3896

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  ctgcctccacaaggcagcaa 406
            ||||||||||||||||||||
Sbjct: 3193 ctgcctccacaaggcagcaa 3212
to top
>gb|BC033210.1| Homo sapiens nuclear factor of kappa light polypeptide gene enhancer
            in B-cells 1 (p105), mRNA (cDNA clone IMAGE:4906270),
            partial cds
          Length = 2191

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  ctgcctccacaaggcagcaa 406
            ||||||||||||||||||||
Sbjct: 1471 ctgcctccacaaggcagcaa 1490
to top
>emb|CR749522.1| Homo sapiens mRNA; cDNA DKFZp686C01211 (from clone DKFZp686C01211)
          Length = 3657

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  ctgcctccacaaggcagcaa 406
            ||||||||||||||||||||
Sbjct: 2950 ctgcctccacaaggcagcaa 2969
to top
>dbj|AK122850.1| Homo sapiens cDNA FLJ16470 fis, clone BRHIP3009181, highly  similar
            to NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT
          Length = 4010

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  ctgcctccacaaggcagcaa 406
            ||||||||||||||||||||
Sbjct: 3322 ctgcctccacaaggcagcaa 3341
to top
>gb|AE012180.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 88 of
            460 of the complete genome
          Length = 10929

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 119  cgcccagctccagcccgaggcgcg 142
            |||||||||||||||||| |||||
Sbjct: 8617 cgcccagctccagcccgacgcgcg 8640
to top
>ref|XM_938882.1| PREDICTED: Homo sapiens KIAA1442 protein (KIAA1442), mRNA
          Length = 3007

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  ccccgccgcggccgccgccg 75
           ||||||||||||||||||||
Sbjct: 233 ccccgccgcggccgccgccg 214
to top
>ref|XM_044921.6| PREDICTED: Homo sapiens KIAA1442 protein (KIAA1442), mRNA
          Length = 3007

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  ccccgccgcggccgccgccg 75
           ||||||||||||||||||||
Sbjct: 233 ccccgccgcggccgccgccg 214
to top
>gb|AC021120.6| Homo sapiens BAC clone RP11-347O8 from 4, complete sequence
          Length = 193980

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   ctgcctccacaaggcagcaa 406
             ||||||||||||||||||||
Sbjct: 46559 ctgcctccacaaggcagcaa 46540
to top
>emb|CR387086.1| Gallus gallus finished cDNA, clone ChEST498b13
          Length = 734

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 57 cccgccgcggccgccgccgg 76
          ||||||||||||||||||||
Sbjct: 89 cccgccgcggccgccgccgg 70
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 119     cgcccagctccagcccgaggcgcg 142
               |||||||||||||||||| |||||
Sbjct: 4072173 cgcccagctccagcccgacgcgcg 4072150
to top
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    ccgccgcggccgccgccggt 77
             ||||||||||||||||||||
Sbjct: 84122 ccgccgcggccgccgccggt 84103
to top
>emb|BX936285.5| Mouse DNA sequence from clone RP23-162H12 on chromosome 2, complete
            sequence
          Length = 19797

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   ccccgccgcggccgccgccg 75
            ||||||||||||||||||||
Sbjct: 7000 ccccgccgcggccgccgccg 6981
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 56       ccccgccgcggccgccgccg 75
                ||||||||||||||||||||
Sbjct: 17344250 ccccgccgcggccgccgccg 17344231
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 59       cgccgcggccgccgccggtg 78
                ||||||||||||||||||||
Sbjct: 19702097 cgccgcggccgccgccggtg 19702078



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 54       gaccccgccgcggccgccgc 73
                ||||||||||||||||||||
Sbjct: 16969429 gaccccgccgcggccgccgc 16969410



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 56       ccccgccgcggccgccgccg 75
                ||||||||||||||||||||
Sbjct: 16030734 ccccgccgcggccgccgccg 16030753
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 52      cggaccccgccgcggccgccgccg 75
               ||||||||||||| ||||||||||
Sbjct: 2977731 cggaccccgccgccgccgccgccg 2977754
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 52       cggaccccgccgcggccgccgccg 75
                ||||||||||||||| ||||||||
Sbjct: 19822033 cggaccccgccgcggtcgccgccg 19822056



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 56       ccccgccgcggccgccgccg 75
                ||||||||||||||||||||
Sbjct: 11325840 ccccgccgcggccgccgccg 11325859
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 56      ccccgccgcggccgccgccg 75
               ||||||||||||||||||||
Sbjct: 8478537 ccccgccgcggccgccgccg 8478556
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 57      cccgccgcggccgccgccgg 76
               ||||||||||||||||||||
Sbjct: 6541343 cccgccgcggccgccgccgg 6541362
to top
>emb|BX817659.1|CNS0AEC5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL35ZF07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 888

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 gtcaataagataatggaaac 172
           ||||||||||||||||||||
Sbjct: 183 gtcaataagataatggaaac 202
to top
>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence
          Length = 94287

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 133   ccgaggcgcgtagcaggatcgtca 156
             |||||||||| |||||||||||||
Sbjct: 53193 ccgaggcgcgcagcaggatcgtca 53170
to top
>gb|AY223820.1| Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in
              B-cells 1 (p105) (NFKB1) gene, complete cds
          Length = 117359

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 387    ctgcctccacaaggcagcaa 406
              ||||||||||||||||||||
Sbjct: 113357 ctgcctccacaaggcagcaa 113376
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 56      ccccgccgcggccgccgccg 75
               ||||||||||||||||||||
Sbjct: 4657501 ccccgccgcggccgccgccg 4657520
to top
>dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0489G09
          Length = 148707

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     cccgccgcggccgccgccgg 76
              ||||||||||||||||||||
Sbjct: 108823 cccgccgcggccgccgccgg 108842
to top
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0483F08
          Length = 148985

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    cccgccgcggccgccgccgg 76
             ||||||||||||||||||||
Sbjct: 21514 cccgccgcggccgccgccgg 21533
to top
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1386G10
          Length = 121827

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    ccccgccgcggccgccgccg 75
             ||||||||||||||||||||
Sbjct: 13549 ccccgccgcggccgccgccg 13568
to top
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0551A03
          Length = 173027

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    cggaccccgccgcggccgccgccg 75
             ||||||||||||||| ||||||||
Sbjct: 89078 cggaccccgccgcggtcgccgccg 89101
to top
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0488D02
          Length = 154537

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    gaccccgccgcggccgccgc 73
             ||||||||||||||||||||
Sbjct: 99242 gaccccgccgcggccgccgc 99223
to top
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1328_D07
          Length = 155007

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    ccccgccgcggccgccgccg 75
             ||||||||||||||||||||
Sbjct: 30947 ccccgccgcggccgccgccg 30966
to top
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0450E05
          Length = 176553

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    cgccgcggccgccgccggtg 78
             ||||||||||||||||||||
Sbjct: 47783 cgccgcggccgccgccggtg 47764
to top
>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0024L18
          Length = 150128

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    cggaccccgccgcggccgccgccg 75
             ||||||||||||| ||||||||||
Sbjct: 23786 cggaccccgccgccgccgccgccg 23809
to top
>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0011N12
          Length = 158586

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     ccccgccgcggccgccgccg 75
              ||||||||||||||||||||
Sbjct: 131387 ccccgccgcggccgccgccg 131406
to top
>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1113_G05
          Length = 131445

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    ccccgccgcggccgccgccg 75
             ||||||||||||||||||||
Sbjct: 27807 ccccgccgcggccgccgccg 27826
to top
>emb|AL831750.8| Mouse DNA sequence from clone RP23-37L2 on chromosome X, complete
              sequence
          Length = 189991

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    aatggaaactctcaagaagc 183
              ||||||||||||||||||||
Sbjct: 181584 aatggaaactctcaagaagc 181603
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>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016N23
          Length = 147336

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    cggaccccgccgcggccgccgccg 75
             ||||||||||||| ||||||||||
Sbjct: 97060 cggaccccgccgccgccgccgccg 97083
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>gb|AF213884.1|AF213884S1 Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in
              B-cells 1 (NFKB1) gene, complete cds
          Length = 190000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 387    ctgcctccacaaggcagcaa 406
              ||||||||||||||||||||
Sbjct: 178302 ctgcctccacaaggcagcaa 178321
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>dbj|AK111165.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B06, full
            insert sequence
          Length = 3209

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   cccgccgcggccgccgccgg 76
            ||||||||||||||||||||
Sbjct: 2695 cccgccgcggccgccgccgg 2676
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>dbj|AK111116.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-B09, full
           insert sequence
          Length = 732

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 52  cggaccccgccgcggccgccgccg 75
           ||||||||||||| ||||||||||
Sbjct: 237 cggaccccgccgccgccgccgccg 214
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>dbj|AK109524.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F10, full
            insert sequence
          Length = 1966

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 57   cccgccgcggccgccgccgg 76
            ||||||||||||||||||||
Sbjct: 1233 cccgccgcggccgccgccgg 1252
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>dbj|AK109472.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E12, full
           insert sequence
          Length = 1717

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  cgccgcggccgccgccggtg 78
           ||||||||||||||||||||
Sbjct: 248 cgccgcggccgccgccggtg 267
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>dbj|AK105193.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-D11, full
           insert sequence
          Length = 1364

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 52  cggaccccgccgcggccgccgccg 75
           ||||||||||||| ||||||||||
Sbjct: 353 cggaccccgccgccgccgccgccg 376
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>dbj|AK101254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032F20, full
           insert sequence
          Length = 2519

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 52  cggaccccgccgcggccgccgccg 75
           ||||||||||||| ||||||||||
Sbjct: 245 cggaccccgccgccgccgccgccg 222
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>dbj|AK099033.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129L11, full
           insert sequence
          Length = 1424

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  cgccgcggccgccgccggtg 78
           ||||||||||||||||||||
Sbjct: 105 cgccgcggccgccgccggtg 86
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>dbj|AK071999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094N11, full
           insert sequence
          Length = 1466

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  cgccgcggccgccgccggtg 78
           ||||||||||||||||||||
Sbjct: 164 cgccgcggccgccgccggtg 145
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 56       ccccgccgcggccgccgccg 75
                ||||||||||||||||||||
Sbjct: 17438109 ccccgccgcggccgccgccg 17438090
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>emb|CT009570.9| Zebrafish DNA sequence from clone CH211-185J11 in linkage group 16,
             complete sequence
          Length = 137019

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   aagataatggaaactctcaa 178
             ||||||||||||||||||||
Sbjct: 38358 aagataatggaaactctcaa 38339
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>dbj|AP000864.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-674N23, complete
             sequence
          Length = 171200

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 269   caatcagtctgattatttgcggaa 292
             ||||||||||||||| ||||||||
Sbjct: 32772 caatcagtctgattagttgcggaa 32795
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>emb|Z47743.1|HSNFX23 H.sapiens NFKB1 gene, exon 23
          Length = 456

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 ctgcctccacaaggcagcaa 406
           ||||||||||||||||||||
Sbjct: 288 ctgcctccacaaggcagcaa 307
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>gb|M55643.1|HUMNFKB34 Human factor KBF1 mRNA, complete cds
          Length = 3205

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  ctgcctccacaaggcagcaa 406
            ||||||||||||||||||||
Sbjct: 2907 ctgcctccacaaggcagcaa 2926
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>gb|M58603.1|HUMNFKB Human nuclear factor kappa-B DNA binding subunit (NF-kappa-B) mRNA,
            complete cds
          Length = 3625

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  ctgcctccacaaggcagcaa 406
            ||||||||||||||||||||
Sbjct: 3120 ctgcctccacaaggcagcaa 3139


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,071,691
Number of Sequences: 3902068
Number of extensions: 4071691
Number of successful extensions: 152226
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 149919
Number of HSP's gapped (non-prelim): 2308
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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