ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbah59p22 | 522 | BJ552786 | not_full | ref|XM_478377.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1469 | 54 | not_full | ATPG_TOBAC (P29790) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) Length = 377 | 284 | -- | --- | - | -- | --- | - |
| rbah59p20 | 214 | BJ552785 | not_full | gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12, complete sequence Length = 173073 | 13 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59p19 | 199 | BJ486055 | not_full | gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protei | 10 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59p16 | 120 | BJ552784 | not_full | ref|NM_185505.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1406 | 9 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59p15 | 467 | BJ552783 | not_full | gb|BT009303.1| Triticum aestivum clone wlm1.pk0014.g10:fis, full insert mRNA sequence Length = 813 | 87 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59p13 | 582 | BJ486054 | not_full | emb|AJ784275.3| Hordeum vulgare subsp. vulgare mRNA for putative lectin receptor-type protein kinase (lrk1 gene) Length = 2338 | 7 | not_full | CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast precursor (EC 2.7.11.1) Length = 419 | 7 | -- | --- | - | -- | --- | - |
| rbah59p11 | 182 | BJ486053 | not_full | emb|AL513524.8| Human DNA sequence from clone RP11-295F4 on chromosome 6 Contains a ribosomal protein L21 (RPL21) pseudogene, a trace amine receptor 3 (TAR3) pseudogene, the GPR102 gene for G protein-coupled receptor 102 (TA5, TAR5), the gene for trace am | 13 | not_full | MOK11_SCHPO (Q09854) Cell wall alpha-1,3-glucan synthase mok11 (EC 2.4.1.183) Length = 2397 | 1 | -- | --- | - | -- | --- | - |
| rbah59p09 | 207 | BJ486052 | not_full | gb|AC008833.5|AC008833 Homo sapiens chromosome 5 clone CTD-2146O16, complete sequence Length = 141894 | 11 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59p08 | 230 | BJ486051 | not_full | emb|X15233.1|TAPGKCHL Wheat mRNA for chloroplast phosphoglycerate kinase (EC 2.7.2.3) Length = 1605 | 53 | not_full | PGKH_WHEAT (P12782) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) Length = 480 | 229 | -- | --- | - | -- | --- | - |
| rbah59p07 | 447 | BJ486050 | not_full | gb|AF488730.1| Triticum aestivum small Ran-related GTP-binding protein mRNA, complete cds Length = 1055 | 310 | not_full | RANA1_TOBAC (P41918) GTP-binding nuclear protein Ran-A1 Length = 221 | 43 | -- | --- | - | -- | --- | - |
| rbah59p06 | 624 | BJ486049 | not_full | emb|X15233.1|TAPGKCHL Wheat mRNA for chloroplast phosphoglycerate kinase (EC 2.7.2.3) Length = 1605 | 267 | not_full | PGKH_WHEAT (P12782) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) Length = 480 | 263 | -- | --- | - | -- | --- | - |
| rbah59p05 | 611 | BJ552782 | not_full | gb|M36650.1|BLYGAPDH Barley glyceraldehyde-3-phosphate dehydrogenase mRNA, 3NULL end Length = 1141 | 500 | not_full | G3PC_HORVU (P08477) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) (Fragment) Length = 305 | 263 | -- | --- | - | -- | --- | - |
| rbah59p04 | 680 | BJ552781 | not_full | ref|XM_493940.1| Oryza sativa (japonica cultivar-group), Ozsa8005 predicted mRNA Length = 1449 | 500 | not_full | LAS17_YEAST (Q12446) Proline-rich protein LAS17 Length = 633 | 50 | -- | --- | - | -- | --- | - |
| rbah59p03 | 919 | BJ486048 | not_full | gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 | 500 | not_full | UBIQ_WHEAT (P69326) Ubiquitin Length = 76 | 160 | -- | --- | - | -- | --- | - |
| rbah59p02 | 151 | BJ552780 | not_full | gb|AC108852.9| Mus musculus chromosome 3, clone RP24-87H3, complete sequence Length = 220174 | 24 | not_full | SA155_YEAST (P43612) SIT4-associating protein SAP155 Length = 1002 | 10 | -- | --- | - | -- | --- | - |
| rbah59p01 | 659 | BJ486047 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 89 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 24 | -- | --- | - | -- | --- | - |
| rbah59o24 | 196 | BJ552779 | not_full | emb|AJ581660.1|HVU581660 Hordeum vulgare chloroplast partial mRNA for nucleotide pyrophosphatase/phosphodiesterase (npp gene) Length = 1268 | 43 | not_full | NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) Length = 368 | 1 | -- | --- | - | -- | --- | - |
| rbah59o23 | 336 | BJ552778 | not_full | emb|AJ581660.1|HVU581660 Hordeum vulgare chloroplast partial mRNA for nucleotide pyrophosphatase/phosphodiesterase (npp gene) Length = 1268 | 28 | not_full | NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) Length = 368 | 4 | -- | --- | - | -- | --- | - |
| rbah59o22 | 257 | BJ486046 | not_full | emb|CR361548.8| Zebrafish DNA sequence from clone CH211-140M22 in linkage group 1, complete sequence Length = 146409 | 7 | not_full | PAPC_ECOLI (P07110) Outer membrane usher protein papC precursor Length = 836 | 1 | -- | --- | - | -- | --- | - |
| rbah59o20 | 194 | BJ486045 | not_full | gb|AF488730.1| Triticum aestivum small Ran-related GTP-binding protein mRNA, complete cds Length = 1055 | 39 | not_full | NXF2_DROME (Q9VV73) Nuclear RNA export factor 2 Length = 841 | 2 | -- | --- | - | -- | --- | - |
| rbah59o18 | 500 | BJ552777 | not_full | gb|M36650.1|BLYGAPDH Barley glyceraldehyde-3-phosphate dehydrogenase mRNA, 3NULL end Length = 1141 | 500 | not_full | G3PC_HORVU (P08477) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) (Fragment) Length = 305 | 265 | -- | --- | - | -- | --- | - |
| rbah59o16 | 572 | BJ486044 | not_full | ref|XM_474475.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3066 | 72 | not_full | WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3 precursor Length = 556 | 19 | -- | --- | - | -- | --- | - |
| rbah59o15 | 369 | BJ552776 | not_full | gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-associated protein-3 (SAP-3) mRNA, complete cds Length = 1132 | 26 | not_full | ERBB2_CANFA (O18735) Receptor tyrosine-protein kinase erbB-2 precursor (EC 2.7.10.1) (p185erbB2) (C-erbB-2) Length = 1259 | 14 | -- | --- | - | -- | --- | - |
| rbah59o13 | 271 | BJ552775 | not_full | gb|M36650.1|BLYGAPDH Barley glyceraldehyde-3-phosphate dehydrogenase mRNA, 3NULL end Length = 1141 | 500 | not_full | G3PC_HORVU (P08477) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) (Fragment) Length = 305 | 236 | -- | --- | - | -- | --- | - |
| rbah59o12 | 296 | BJ486043 | not_full | ref|NM_190784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 | 73 | not_full | PSBS_TOBAC (Q9SMB4) Photosystem II 22 kDa protein, chloroplast precursor (CP22) Length = 274 | 6 | -- | --- | - | -- | --- | - |
| rbah59o11 | 313 | BJ486042 | not_full | ref|NM_190784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 | 72 | not_full | PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast precursor (CP22) Length = 276 | 9 | -- | --- | - | -- | --- | - |
| rbah59o09 | 350 | BJ552774 | not_full | ref|XM_609881.2| PREDICTED: Bos taurus transient receptor potential channel 2, transcript variant 1 (TRPC2), mRNA Length = 4062 | 22 | not_full | SECY_BUCAI (P57571) Preprotein translocase secY subunit Length = 437 | 21 | -- | --- | - | -- | --- | - |
| rbah59o07 | 596 | BJ486041 | not_full | gb|AC158139.11| Mus musculus chromosome 1, clone RP23-431H7, complete sequence Length = 201254 | 54 | not_full | DPOL_EHV2 (P52367) DNA polymerase (EC 2.7.7.7) Length = 1008 | 1 | -- | --- | - | -- | --- | - |
| rbah59o06 | 560 | BJ486040 | not_full | gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete sequence Length = 253151 | 46 | not_full | ARHG7_RAT (O55043) Rho guanine nucleotide exchange factor 7 (PAK-interacting exchange factor beta) (Beta-Pix) Length = 646 | 6 | -- | --- | - | -- | --- | - |
| rbah59o04 | 664 | BJ486039 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 460 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 165 | -- | --- | - | -- | --- | - |
| rbah59o02 | 226 | BJ486038 | not_full | dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 | 37 | not_full | KCND1_HUMAN (Q9NSA2) Potassium voltage-gated channel subfamily D member 1 (Voltage-gated potassium channel subunit Kv4.1) Length = 647 | 6 | -- | --- | - | -- | --- | - |
| rbah59n23 | 513 | BJ552773 | not_full | gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1577 | 128 | not_full | ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) Length = 388 | 51 | -- | --- | - | -- | --- | - |
| rbah59n22 | 254 | BJ486037 | not_full | gb|AC154655.2| Mus musculus BAC clone RP24-263O11 from chromosome 14, complete sequence Length = 196744 | 5 | not_full | DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like protein A) (Dynamin-like protein 1) Length = 610 | 4 | -- | --- | - | -- | --- | - |
| rbah59n20 | 290 | BJ552772 | not_full | dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds Length = 1285 | 29 | not_full | HYIN1_AGRVI (Q04557) Indoleacetamide hydrolase (EC 3.5.1.-) (IAH) (Indole-3-acetamide hydrolase) Length = 462 | 2 | -- | --- | - | -- | --- | - |
| rbah59n19 | 140 | BJ486036 | not_full | emb|BX470117.7| Zebrafish DNA sequence from clone CH211-204N10 in linkage group 19, complete sequence Length = 169993 | 9 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59n17 | 498 | BJ486035 | not_full | ref|NM_187789.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1281 | 17 | not_full | RHAB_ERWCT (Q6DA23) Rhamnulokinase (EC 2.7.1.5) (Rhamnulose kinase) Length = 496 | 35 | -- | --- | - | -- | --- | - |
| rbah59n16 | 293 | BJ486034 | not_full | ref|XM_507580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011E04.125 mRNA Length = 1513 | 12 | not_full | QORL_ARATH (Q9ZUC1) Quinone oxidoreductase-like protein At1g23740, chloroplast precursor (EC 1.-.-.-) Length = 386 | 18 | -- | --- | - | -- | --- | - |
| rbah59n15 | 471 | BJ486033 | not_full | gb|AY596532.1| Saccharum officinarum clone SCQGLR1085E10, complete sequence Length = 887 | 150 | not_full | YD52_SCHPO (Q10307) Hypothetical protein C6C3.02c in chromosome I Length = 172 | 3 | -- | --- | - | -- | --- | - |
| rbah59n13 | 206 | BJ486032 | not_full | gb|AC008623.4| Homo sapiens chromosome 19 clone CTB-14D10, complete sequence Length = 128266 | 3 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59n12 | 406 | BJ486031 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 68 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 28 | -- | --- | - | -- | --- | - |
| rbah59n11 | 659 | BJ486030 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbah59n09 | 367 | BJ486029 | not_full | gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence Length = 215514 | 13 | not_full | RN139_HUMAN (Q8WU17) RING finger protein 139 (Translocation in renal carcinoma on chromosome 8) Length = 664 | 2 | -- | --- | - | -- | --- | - |
| rbah59n08 | 276 | BJ486028 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 2 | not_full | PYRC_METKA (Q8TXX9) Dihydroorotase (EC 3.5.2.3) (DHOase) Length = 426 | 7 | -- | --- | - | -- | --- | - |
| rbah59n07 | 189 | BJ486027 | not_full | emb|AL357139.11| Human DNA sequence from clone RP11-793L10 on chromosome 6 Contains a pseudogene similar to part of heterogeneous nuclear ribonucleoprotein D (37 kD AU-rich element RNA binding protein 1) (HNRPD) (P37 AUF1 AUF1A hnRNP D0), complete sequenc | 23 | not_full | CASP1_RAT (P43527) Caspase-1 precursor (EC 3.4.22.36) (CASP-1) (Interleukin-1 beta convertase) (IL-1BC) (IL-1 beta-converting enzyme) (ICE) (Interleukin-1 beta-converting enzyme) (p45) [Contains: Caspase-1 p20 subunit; Caspase-1 p10 subunit] Length = 402 | 1 | -- | --- | - | -- | --- | - |
| rbah59n06 | 314 | BJ552771 | not_full | gb|AC007374.6|AC007374 Homo sapiens chromosome 14 clone RP11-325L17 map 14q31, complete sequence Length = 190565 | 13 | not_full | NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-) (Nepenthesin-I) Length = 437 | 2 | -- | --- | - | -- | --- | - |
| rbah59n05 | 541 | BJ486026 | not_full | gb|AY291061.1| Zea mays photosystem II subunit PsbS precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 | 114 | not_full | PSBS_LYCES (P54773) Photosystem II 22 kDa protein, chloroplast precursor (CP22) Length = 276 | 91 | -- | --- | - | -- | --- | - |
| rbah59n01 | 583 | BJ486025 | not_full | gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (HSP90) mRNA, complete cds Length = 2553 | 497 | not_full | HSP83_ORYSA (Q07078) Heat shock protein 81-3 (HSP81-3) (Gravity-specific protein GSC 381) Length = 699 | 168 | -- | --- | - | -- | --- | - |
| rbah59m22 | 288 | BJ552770 | not_full | ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 | 29 | not_full | SYMM_XENLA (Q7T0Z0) Methionyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.10) (Methionine--tRNA ligase 2) (Mitochondrial methionine--tRNA ligase) (MtMetRS) Length = 562 | 5 | -- | --- | - | -- | --- | - |
| rbah59m16 | 417 | BJ486024 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 66 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 19 | -- | --- | - | -- | --- | - |
| rbah59m15 | 207 | BJ486023 | not_full | emb|X60343.1|HVGADPH H.vulgare GADPH mRNA for glycolytic glyceraldehyde-3-phosphate dehydrogenase Length = 1365 | 41 | not_full | RIM15_YEAST (P43565) Serine/threonine-protein kinase RIM15 (EC 2.7.11.1) Length = 1770 | 1 | -- | --- | - | -- | --- | - |
