>PSBS_TOBAC (Q9SMB4) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 274

 Score =  103 bits (257), Expect = 1e-22
 Identities = 49/56 (87%), Positives = 54/56 (96%)
 Frame = -1

Query: 296 LGIAFSIXGEIITGKGALAQLNIETGVPISEIEPLVLFNVVFFFIAAINPGTGKFI 129
           LGIAFSI GEIITGKGALAQLN ETGVPI+EIEPL+LFN+VFFF+AAINPGTGKF+
Sbjct: 213 LGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFV 268



 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
 Frame = -1

Query: 296 LGIAFSIXGEIITGKGALAQLNIETGVPISEIEPLVLFNVVFFFIAAIN--PGTGKFI 129
           +G A S+ GE ITGKG LAQLN+ETG+PI E EPL+LF ++F  + AI      GKFI
Sbjct: 107 IGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFI 164

>PSBS_SPIOL (Q02060) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 274

 Score =  102 bits (255), Expect = 2e-22
 Identities = 51/56 (91%), Positives = 53/56 (94%)
 Frame = -1

Query: 296 LGIAFSIXGEIITGKGALAQLNIETGVPISEIEPLVLFNVVFFFIAAINPGTGKFI 129
           LG AFS+ GEIITGKGALAQLNIETGVPI+EIEPLVL NVVFFFIAAINPGTGKFI
Sbjct: 212 LGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAINPGTGKFI 267



 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
 Frame = -1

Query: 296 LGIAFSIXGEIITGKGALAQLNIETGVPISEIEPLVLFNVVFFFIAAINP--GTGKFI 129
           +G A S+ GE ITGKG L+QLN+ETG+PI E EPL+LF ++F  + AI      G+F+
Sbjct: 108 IGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFV 165

>PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 276

 Score =  101 bits (251), Expect = 6e-22
 Identities = 49/56 (87%), Positives = 52/56 (92%)
 Frame = -1

Query: 296 LGIAFSIXGEIITGKGALAQLNIETGVPISEIEPLVLFNVVFFFIAAINPGTGKFI 129
           LGIAFSI GEIITGKGALAQLN ETGVPI+EIEPL+LFN+ FFF AAINPGTGKFI
Sbjct: 215 LGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFI 270



 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
 Frame = -1

Query: 296 LGIAFSIXGEIITGKGALAQLNIETGVPISEIEPLVLFNVVFFFIAAINP--GTGKFI 129
           +G A S+ GE ITGKG LAQLN+ETG+PI E EPL+LF ++F  + AI      G+FI
Sbjct: 109 IGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFI 166

>PSBS_LYCES (P54773) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 276

 Score =  101 bits (251), Expect = 6e-22
 Identities = 49/56 (87%), Positives = 52/56 (92%)
 Frame = -1

Query: 296 LGIAFSIXGEIITGKGALAQLNIETGVPISEIEPLVLFNVVFFFIAAINPGTGKFI 129
           LGIAFSI GEIITGKGALAQLN ETGVPI+EIEPL+LFN+ FFF AAINPGTGKFI
Sbjct: 215 LGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFI 270



 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
 Frame = -1

Query: 296 LGIAFSIXGEIITGKGALAQLNIETGVPISEIEPLVLFNVVFFFIAAINP--GTGKFI 129
           +G A S+ GE ITGKG LAQLN+ETG+PI E EPL+LF ++F  + AI      GKF+
Sbjct: 109 IGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFV 166

>PSBS_ARATH (Q9XF91) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 265

 Score = 97.4 bits (241), Expect = 8e-21
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -1

Query: 296 LGIAFSIXGEIITGKGALAQLNIETGVPISEIEPLVLFNVVFFFIAAINPGTGKFI 129
           LGIAFS+ GEIITGKGALAQLNIETG+PI +IEPLVL NV FFF AAINPG GKFI
Sbjct: 203 LGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFI 258



 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
 Frame = -1

Query: 296 LGIAFSIXGEIITGKGALAQLNIETGVPISEIEPLVLFNVVFFFIAAINP--GTGKFI 129
           +G A S+ GE +TGKG LAQLN+ETG+PI E EPL+LF ++F  + AI      GKF+
Sbjct: 99  IGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFV 156

>Y232_RICPR (Q9ZDU2) Hypothetical protein RP232|
          Length = 415

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 11/55 (20%)
 Frame = -1

Query: 266 IITGKGALAQLNIETG-----VPISEIEPLVLFNVVFFFI------AAINPGTGK 135
           I TG G L +LN+ TG     +   +I+ + L     F I      AA+NP TGK
Sbjct: 268 IATGLGKLIKLNLLTGSVLWQINADDIQSMSLIGNSLFIINNARQIAALNPETGK 322


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,395,601
Number of Sequences: 219361
Number of extensions: 323372
Number of successful extensions: 1012
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)