ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah59m16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 726 0.0
2gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo... 599 e-168
3gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 599 e-168
4gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 452 e-124
5gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 424 e-115
6gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 363 3e-97
7emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat... 359 5e-96
8gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 228 1e-56
9dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
10dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
11dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
12dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
13dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 135 1e-28
14gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 133 5e-28
15gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 133 5e-28
16gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 133 5e-28
17dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 133 5e-28
18dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 133 5e-28
20dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 133 5e-28
21gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplas... 121 2e-24
22dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 8e-24
23gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tet... 101 2e-18
24gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 90 7e-15
25gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca... 88 3e-14
26gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox... 84 4e-13
27gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 84 4e-13
28gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 84 4e-13
29gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 84 4e-13
30emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase 80 6e-12
31dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
32dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
33gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 74 4e-10
34gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 68 2e-08
35gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 68 2e-08
36gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 64 4e-07
37gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec... 44 0.36
38gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl... 44 0.36
39emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car... 44 0.36
40dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
41emb|Y10657.1|CLRCAGENE C.littorale rca gene 42 1.4
42gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
43emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.4
44gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Synten... 40 5.6
45gb|U60105.1| Bos taurus large conductance calcium-activated pota... 40 5.6
46gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trx... 40 5.6
47gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre... 40 5.6
48gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, ... 40 5.6
49ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001... 40 5.6
50gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complet... 40 5.6
51gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete... 40 5.6
52gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, comp... 40 5.6
53gb|AF026000.2| Sus scrofa calcium-activated potassium channel al... 40 5.6
54gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co... 40 5.6
55ref|NM_174680.2| Bos taurus potassium large conductance calcium-... 40 5.6
56gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.6
57gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Synten... 40 5.6
58gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN... 40 5.6
59gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN... 40 5.6
60gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN... 40 5.6
61emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ... 40 5.6
62gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com... 40 5.6
63ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ... 40 5.6
64ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smoot... 40 5.6
65gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, ... 40 5.6
66gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone... 40 5.6 
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  726 bits (366), Expect = 0.0
 Identities = 409/418 (97%), Gaps = 5/418 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    caaaacatgcccagcaatcgcttgntatgcgatgcggacttag-gtaggtaaaacatcag 59
            ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||
Sbjct: 1666 caaaacatgcccagcaatcgcttgg-atgcgatgcggacttagtgtaggtaaaacatcag 1608

                                                                        
Query: 60   atattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgt-cgtcgctccttgccg 118
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1607 atattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgttcgtcgctccttgccg 1548

                                                                        
Query: 119  ttgggtcgtagttcttggcattttggtcggtgcaaccttccggca-cgggcaaagtacct 177
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1547 ttgggtcgtagttcttggcattttggtcggtgcaaccttccggcatcgggcaaagtacct 1488

                                                                        
Query: 178  tgctgtgctcctttacctcctcctatgcagcaagagatggtggntgt-gtatggagaatt 236
            ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 1487 tgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgttgtatggagaatt 1428

                                                                        
Query: 237  ttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcc 296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1427 ttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcc 1368

                                                                        
Query: 297  tggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagc 356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1367 tggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagc 1308

                                                                      
Query: 357  atgtgcccgtactctagcagcttctcgactgncatctttggctgctcnaaggtcacgg 414
            ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 1307 atgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgg 1250
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>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  599 bits (302), Expect = e-168
 Identities = 391/418 (93%), Gaps = 8/418 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaaacatgcccagcaatcgcttgntatgcgatgcgg-acttaggta-----ggtaaaac 54
           ||||||||||||||||||||||||  ||||||||||| |||||||||     | ||||||
Sbjct: 737 caaaacatgcccagcaatcgcttgg-atgcgatgcggtacttaggtacaaaggataaaac 679

                                                                       
Query: 55  atcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctt 114
           |||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 678 atcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgtcactcctc 620

                                                                       
Query: 115 gccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagta 174
           |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |||||||||
Sbjct: 619 gccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacaggcaaagta 560

                                                                       
Query: 175 ccttgctgtgctcctttacctcctcctatgcagcaagagatggtggntgtgtatggagaa 234
           ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 559 ccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgtatggagaa 500

                                                                       
Query: 235 ttttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctg 294
           | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacccagagctg 440

                                                                       
Query: 295 cctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacga 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacga 380

                                                                     
Query: 355 gcatgtgcccgtactctagcagcttctcgactgncatctttggctgctcnaaggtcac 412
           |||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 379 gcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaaggtcac 322
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>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  599 bits (302), Expect = e-168
 Identities = 391/418 (93%), Gaps = 8/418 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    caaaacatgcccagcaatcgcttgntatgcgatgcgg-acttaggta-----ggtaaaac 54
            ||||||||||||||||||||||||  ||||||||||| |||||||||     | ||||||
Sbjct: 1587 caaaacatgcccagcaatcgcttgg-atgcgatgcggtacttaggtacaaaggataaaac 1529

                                                                        
Query: 55   atcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctt 114
            |||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 1528 atcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgtcactcctc 1470

                                                                        
Query: 115  gccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagta 174
            |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |||||||||
Sbjct: 1469 gccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacaggcaaagta 1410

                                                                        
Query: 175  ccttgctgtgctcctttacctcctcctatgcagcaagagatggtggntgtgtatggagaa 234
            ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1409 ccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgtatggagaa 1350

                                                                        
Query: 235  ttttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctg 294
            | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1349 tgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacccagagctg 1290

                                                                        
Query: 295  cctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacga 354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 cctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacga 1230

                                                                      
Query: 355  gcatgtgcccgtactctagcagcttctcgactgncatctttggctgctcnaaggtcac 412
            |||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 1229 gcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaaggtcac 1172
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>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  452 bits (228), Expect = e-124
 Identities = 319/349 (91%), Gaps = 2/349 (0%)
 Strand = Plus / Minus

                                                                        
Query: 66   aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 125
            |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1527 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1468

                                                                        
Query: 126  gtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgc 185
            | ||||||||||||   ||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct: 1467 gaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttgttgtgc 1408

                                                                        
Query: 186  tcctttacctcctcctatgcagcaagagatggtggntgtgtatggagaattttctaaccg 245
            |||||||||||||||||||||||||||||||||||  ||||||| ||| | |||||||||
Sbjct: 1407 tcctttacctcctcctatgcagcaagagatggtgg--gtgtatgaagagtgttctaaccg 1350

                                                                        
Query: 246  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 305
            |||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||
Sbjct: 1349 tagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggctcatg 1290

                                                                        
Query: 306  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 365
            || ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 1289 taagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtggccg 1230

                                                             
Query: 366  tactctagcagcttctcgactgncatctttggctgctcnaaggtcacgg 414
            ||||| |||| |||||| || | |||||| |||||||| ||||| ||||
Sbjct: 1229 tactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgg 1181
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>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  424 bits (214), Expect = e-115
 Identities = 220/223 (98%)
 Strand = Plus / Minus

                                                                        
Query: 192  acctcctcctatgcagcaagagatggtggntgtgtatggagaattttctaaccgtagaag 251
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 7355 acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 7296

                                                                        
Query: 252  gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7295 gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 7236

                                                                        
Query: 312  tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7235 tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 7176

                                                       
Query: 372  agcagcttctcgactgncatctttggctgctcnaaggtcacgg 414
            |||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 7175 agcagcttctcgactgtcatctttggctgctcgaaggtcacgg 7133



 Score =  367 bits (185), Expect = 2e-98
 Identities = 194/196 (98%), Gaps = 1/196 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    caaaacatgcccagcaatcgcttgntatgcgatgcggacttaggtaggtaaaacatcaga 60
            ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 7717 caaaacatgcccagcaatcgcttgg-atgcgatgcggacttaggtaggtaaaacatcaga 7659

                                                                        
Query: 61   tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgtt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7658 tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgtt 7599

                                                                        
Query: 121  gggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7598 gggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgc 7539

                            
Query: 181  tgtgctcctttacctc 196
            ||||||||||||||||
Sbjct: 7538 tgtgctcctttacctc 7523



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 318  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactc 370
            ||||||||||||||||| || |||||||||||||| |||||||| ||||||||
Sbjct: 3961 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactc 3909
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>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  363 bits (183), Expect = 3e-97
 Identities = 192/194 (98%), Gaps = 1/194 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    caaaacatgcccagcaatcgcttgntatgcgatgcggacttaggtaggtaaaacatcaga 60
            ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 1357 caaaacatgcccagcaatcgcttgg-atgcgatgcggacttaggtaggtaaaacatcaga 1299

                                                                        
Query: 61   tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgtt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgtt 1239

                                                                        
Query: 121  gggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 gggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgc 1179

                          
Query: 181  tgtgctcctttacc 194
            ||||||||||||||
Sbjct: 1178 tgtgctcctttacc 1165



 Score =  331 bits (167), Expect = 1e-87
 Identities = 171/173 (98%)
 Strand = Plus / Minus

                                                                        
Query: 242  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1108

                                                                        
Query: 302  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1048

                                                                 
Query: 362  cccgtactctagcagcttctcgactgncatctttggctgctcnaaggtcacgg 414
            |||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 1047 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgg 995
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>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  359 bits (181), Expect = 5e-96
 Identities = 188/191 (98%)
 Strand = Plus / Minus

                                                                       
Query: 222 tgtgtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagca 281
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgtgtatggagaatgttctaaccgtagaaggaaccagtcttcatcgcatcctggttagca 247

                                                                       
Query: 282 tcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcc 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcc 187

                                                                       
Query: 342 tgctcctggacgagcatgtgcccgtactctagcagcttctcgactgncatctttggctgc 401
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 186 tgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgc 127

                      
Query: 402 tcnaaggtcac 412
           || ||||||||
Sbjct: 126 tcaaaggtcac 116
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>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  228 bits (115), Expect = 1e-56
 Identities = 158/173 (91%)
 Strand = Plus / Minus

                                                                        
Query: 242  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 301
            |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 1363 accgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggct 1304

                                                                        
Query: 302  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 361
            |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1303 catgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtg 1244

                                                                 
Query: 362  cccgtactctagcagcttctcgactgncatctttggctgctcnaaggtcacgg 414
             |||||||| |||| |||||| || | |||||| |||||||| ||||| ||||
Sbjct: 1243 gccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgg 1191



 Score =  176 bits (89), Expect = 4e-41
 Identities = 119/129 (92%)
 Strand = Plus / Minus

                                                                        
Query: 66   aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 125
            |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1489 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1430

                                                                        
Query: 126  gtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgc 185
            | ||||||||||||   ||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct: 1429 gaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttgttgtgc 1370

                     
Query: 186  tcctttacc 194
            |||||||||
Sbjct: 1369 tcctttacc 1361
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>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  135 bits (68), Expect = 1e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 75   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455

                                                                        
Query: 135  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 191
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1395

                      
Query: 192  acctcctcct 201
             |||||||||
Sbjct: 1394 ccctcctcct 1385



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 133/163 (81%)
 Strand = Plus / Minus

                                                                        
Query: 241  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 300
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1310 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1251

                                                                        
Query: 301  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 360
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1250 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1191

                                                       
Query: 361  gcccgtactctagcagcttctcgactgncatctttggctgctc 403
              |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 1190 atccgtactccatgagcttttcgatcgtcatcttgggctgctc 1148
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>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  135 bits (68), Expect = 1e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 75   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493

                                                                        
Query: 135  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 191
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1433

                      
Query: 192  acctcctcct 201
             |||||||||
Sbjct: 1432 ccctcctcct 1423



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 133/163 (81%)
 Strand = Plus / Minus

                                                                        
Query: 241  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 300
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1348 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1289

                                                                        
Query: 301  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 360
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1288 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1229

                                                       
Query: 361  gcccgtactctagcagcttctcgactgncatctttggctgctc 403
              |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 1228 atccgtactccatgagcttttcgatcgtcatcttgggctgctc 1186
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>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  135 bits (68), Expect = 1e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 75   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492

                                                                        
Query: 135  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 191
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1432

                      
Query: 192  acctcctcct 201
             |||||||||
Sbjct: 1431 ccctcctcct 1422



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 133/163 (81%)
 Strand = Plus / Minus

                                                                        
Query: 241  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 300
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1347 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1288

                                                                        
Query: 301  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 360
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1287 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1228

                                                       
Query: 361  gcccgtactctagcagcttctcgactgncatctttggctgctc 403
              |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 1227 atccgtactccatgagcttttcgatcgtcatcttgggctgctc 1185
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>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
            insert sequence
          Length = 1470

 Score =  135 bits (68), Expect = 1e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 75   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276

                                                                        
Query: 135  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 191
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1216

                      
Query: 192  acctcctcct 201
             |||||||||
Sbjct: 1215 ccctcctcct 1206



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 133/163 (81%)
 Strand = Plus / Minus

                                                                        
Query: 241  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 300
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1131 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1072

                                                                        
Query: 301  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 360
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1071 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1012

                                                       
Query: 361  gcccgtactctagcagcttctcgactgncatctttggctgctc 403
              |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 1011 atccgtactccatgagcttttcgatcgtcatcttgggctgctc 969
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>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  135 bits (68), Expect = 1e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 75   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497

                                                                        
Query: 135  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 191
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1437

                      
Query: 192  acctcctcct 201
             |||||||||
Sbjct: 1436 ccctcctcct 1427



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 133/163 (81%)
 Strand = Plus / Minus

                                                                        
Query: 241  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 300
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1352 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1293

                                                                        
Query: 301  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 360
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1292 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1233

                                                       
Query: 361  gcccgtactctagcagcttctcgactgncatctttggctgctc 403
              |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 1232 atccgtactccatgagcttttcgatcgtcatcttgggctgctc 1190
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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  133 bits (67), Expect = 5e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                          
Query: 75     tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
              ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217

                                                 
Query: 135    ggcattttggtcggtgcaaccttccggcacgggca 169
              ||||    |||||||||||||||||||||| ||||
Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 136/166 (81%)
 Strand = Plus / Plus

                                                                          
Query: 238    tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 297
              |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 108306 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 108365

                                                                          
Query: 298    ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 357
               ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 108366 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 108425

                                                            
Query: 358    tgtgcccgtactctagcagcttctcgactgncatctttggctgctc 403
              |||  |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 108426 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctc 108471



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                          
Query: 93     gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 152
              ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 112112

                             
Query: 153    accttccggcacggg 167
               ||  ||||||||||
Sbjct: 112113 tcccgccggcacggg 112127
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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  133 bits (67), Expect = 5e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                         
Query: 75    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
             ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098

                                                
Query: 135   ggcattttggtcggtgcaaccttccggcacgggca 169
             ||||    |||||||||||||||||||||| ||||
Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 136/166 (81%)
 Strand = Plus / Plus

                                                                         
Query: 238   tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 297
             |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 30183 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 30242

                                                                         
Query: 298   ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 357
              ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 30243 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 30302

                                                           
Query: 358   tgtgcccgtactctagcagcttctcgactgncatctttggctgctc 403
             |||  |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 30303 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctc 30348



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 93    gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 152
             ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 33989

                            
Query: 153   accttccggcacggg 167
              ||  ||||||||||
Sbjct: 33990 tcccgccggcacggg 34004
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>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  133 bits (67), Expect = 5e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 75   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461

                                               
Query: 135  ggcattttggtcggtgcaaccttccggcacgggca 169
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 133/163 (81%)
 Strand = Plus / Minus

                                                                        
Query: 241  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 300
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1316 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1257

                                                                        
Query: 301  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 360
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1256 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1197

                                                       
Query: 361  gcccgtactctagcagcttctcgactgncatctttggctgctc 403
              |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 1196 atccgtactcgatgagcttttcgatcgtcatcttgggctgctc 1154
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>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  133 bits (67), Expect = 5e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 75   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371

                                               
Query: 135  ggcattttggtcggtgcaaccttccggcacgggca 169
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggca 1336



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 131/161 (81%)
 Strand = Plus / Minus

                                                                        
Query: 243  ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 302
            ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||
Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250

                                                                        
Query: 303  atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 362
            | |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||  
Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190

                                                     
Query: 363  ccgtactctagcagcttctcgactgncatctttggctgctc 403
            |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctc 1149
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  133 bits (67), Expect = 5e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 75       tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360

                                                   
Query: 135      ggcattttggtcggtgcaaccttccggcacgggca 169
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 136/166 (81%)
 Strand = Plus / Plus

                                                                            
Query: 238      tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 297
                |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 28303445 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28303504

                                                                            
Query: 298      ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 357
                 ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 28303505 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28303564

                                                              
Query: 358      tgtgcccgtactctagcagcttctcgactgncatctttggctgctc 403
                |||  |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 28303565 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctc 28303610



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 93       gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 152
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28307251

                               
Query: 153      accttccggcacggg 167
                 ||  ||||||||||
Sbjct: 28307252 tcccgccggcacggg 28307266
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  133 bits (67), Expect = 5e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 75       tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809

                                                   
Query: 135      ggcattttggtcggtgcaaccttccggcacgggca 169
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 136/166 (81%)
 Strand = Plus / Plus

                                                                            
Query: 238      tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 297
                |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 28285894 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28285953

                                                                            
Query: 298      ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 357
                 ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 28285954 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28286013

                                                              
Query: 358      tgtgcccgtactctagcagcttctcgactgncatctttggctgctc 403
                |||  |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 28286014 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctc 28286059



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 93       gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 152
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28289700

                               
Query: 153      accttccggcacggg 167
                 ||  ||||||||||
Sbjct: 28289701 tcccgccggcacggg 28289715
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>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  133 bits (67), Expect = 5e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 75   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406

                                               
Query: 135  ggcattttggtcggtgcaaccttccggcacgggca 169
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggca 1371



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 131/161 (81%)
 Strand = Plus / Minus

                                                                        
Query: 243  ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 302
            ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||
Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285

                                                                        
Query: 303  atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 362
            | |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||  
Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225

                                                     
Query: 363  ccgtactctagcagcttctcgactgncatctttggctgctc 403
            |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctc 1184
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>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small
           isoform precursor, mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 93

 Score =  121 bits (61), Expect = 2e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                       
Query: 81  aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 140
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  
Sbjct: 93  aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34

                                        
Query: 141 ttggtcggtgcaaccttccggcacgggca 169
             |||||||||||||||||||||| ||||
Sbjct: 33  agggtcggtgcaaccttccggcacaggca 5
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>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  119 bits (60), Expect = 8e-24
 Identities = 114/130 (87%), Gaps = 4/130 (3%)
 Strand = Plus / Minus

                                                                        
Query: 75   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504

                                                                        
Query: 135  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 191
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1444

                      
Query: 192  acctcctcct 201
             |||||||||
Sbjct: 1443 ccctcctcct 1434



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 133/163 (81%)
 Strand = Plus / Minus

                                                                        
Query: 241  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 300
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1359 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1300

                                                                        
Query: 301  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 360
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1299 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1240

                                                       
Query: 361  gcccgtactctagcagcttctcgactgncatctttggctgctc 403
              |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 1239 atccgtactccatgagcttttcgatcgtcatcttgggctgctc 1197
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>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic
           sequence
          Length = 234

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                       
Query: 75  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
           |||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76

                                              
Query: 135 ggcattttggtcggtgcaaccttccggcacgggca 169
           ||||    ||||||  |||||||||||||| ||||
Sbjct: 75  ggcaacagggtcgggtcaaccttccggcacaggca 41
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>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 117/141 (82%)
 Strand = Plus / Minus

                                                                        
Query: 239  ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 298
            |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| 
Sbjct: 1007 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 948

                                                                        
Query: 299  gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 358
            ||||| |||  |||| || |||||||| | ||| || || ||||||||||| || |||||
Sbjct: 947  gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcat 888

                                 
Query: 359  gtgcccgtactctagcagctt 379
            ||  |||||||| ||||||||
Sbjct: 887  gttgccgtactccagcagctt 867



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 85   gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 144
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090

                          
Query: 145  tcggtgcaaccttc 158
            ||||| ||||||||
Sbjct: 1089 tcggtacaaccttc 1076
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>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 133/163 (81%)
 Strand = Plus / Minus

                                                                       
Query: 241 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 300
           ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 565 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 506

                                                                       
Query: 301 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 360
           ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 505 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 446

                                                      
Query: 361 gcccgtactctagcagcttctcgactgncatctttggctgctc 403
             |||||||| |  ||||| ||||  | |||||| ||||||||
Sbjct: 445 atccgtactcgatgagcttttcgatcgtcatcttgggctgctc 403
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>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 114/138 (82%)
 Strand = Plus / Minus

                                                                       
Query: 247 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 306
           ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 919 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 860

                                                                       
Query: 307 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 366
           |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 859 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 800

                             
Query: 367 actctagcagcttctcga 384
           |||| |  ||||||||||
Sbjct: 799 actccaagagcttctcga 782
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>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 114/138 (82%)
 Strand = Plus / Minus

                                                                        
Query: 247  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 306
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 307  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 366
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                              
Query: 367  actctagcagcttctcga 384
            |||| |  ||||||||||
Sbjct: 1194 actccaagagcttctcga 1177
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>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 111/134 (82%)
 Strand = Plus / Minus

                                                                        
Query: 246  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 305
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1194 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1135

                                                                        
Query: 306  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 365
            ||  |||| || |||||||| | ||| || || ||||||||||| || |||||||  |||
Sbjct: 1134 tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 1075

                          
Query: 366  tactctagcagctt 379
            ||||| ||||||||
Sbjct: 1074 tactccagcagctt 1061



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 85   gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 144
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246

                          
Query: 145  tcggtgcaaccttc 158
            ||||| ||||||||
Sbjct: 1245 tcggtacaaccttc 1232
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>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 114/138 (82%)
 Strand = Plus / Minus

                                                                        
Query: 247  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 306
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 307  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 366
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                              
Query: 367  actctagcagcttctcga 384
            |||| |  ||||||||||
Sbjct: 1194 actccaagagcttctcga 1177
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>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                       
Query: 264 atcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgc 323
           |||| ||||| ||| ||||| || |||||||| ||||||| ||| ||||| || || || 
Sbjct: 118 atcgaatcctcgtttgcatctccaagagctgcttggctcaagtacgtgtctgccagttga 59

                                                                   
Query: 324 acacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagctt 379
           || | ||| |||||||||||||||||||| |||||||  || ||||||||||||||
Sbjct: 58  actctcttcacattgtcctgctcctggacaagcatgtttccatactctagcagctt 3
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                           
Query: 75      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
               |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354

                                                  
Query: 135     ggcattttggtcggtgcaaccttccggcacgggca 169
               ||||    |||||||||||||||||||||| ||||
Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319
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>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                         
Query: 75    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 134
             |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728

                                                
Query: 135   ggcattttggtcggtgcaaccttccggcacgggca 169
             ||||    |||||||||||||||||||||| ||||
Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693
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>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 318  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactc 370
            ||||||||||||||||| || |||||||||||||| |||||||| ||||||||
Sbjct: 1392 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactc 1340
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>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 85   gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 144
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391

                          
Query: 145  tcggtgcaaccttc 158
            ||||| ||||||||
Sbjct: 1390 tcggtacaaccttc 1377
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>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 85   gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 144
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216

                          
Query: 145  tcggtgcaaccttc 158
            ||||| ||||||||
Sbjct: 1215 tcggtacaaccttc 1202
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>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 318  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 377
            |||||||| ||||| || || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1242 agctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1183

                                   
Query: 378  ttctcgactgncatctttggctg 400
            |||||||  | |||||| |||||
Sbjct: 1182 ttctcgatggtcatcttgggctg 1160
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>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 267  gcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 316
            |||||||||||||||||||| || || ||||  ||||||||  |||||||
Sbjct: 1355 gcatcctggttagcatcaccaagggcagcctcactcatgtacttgtcagc 1306
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>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 280   catcacccagagctgcctggct 301
             ||||||||||||||||||||||
Sbjct: 51275 catcacccagagctgcctggct 51254
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>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                        
Query: 275  gttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgac 334
            |||||||||||| ||||| |||| ||||| |||  | ||||| |  || || | ||| ||
Sbjct: 1363 gttagcatcaccaagagcagcctcgctcaagtacttatcagccaattgaactctcttcac 1304

                                                                        
Query: 335  attgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgncatctt 394
            ||| || ||||| ||||| |||||||  |||||||| || ||||| ||||  | ||||||
Sbjct: 1303 attctcttgctcttggacaagcatgtttccgtactcgaggagcttttcgatagtcatctt 1244

                     
Query: 395  tggctgctc 403
             ||||||||
Sbjct: 1243 cggctgctc 1235
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 51      aaacatcagatattaaaagtg 71
               |||||||||||||||||||||
Sbjct: 3040440 aaacatcagatattaaaagtg 3040420
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>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 318  agctgcacacgcttgacattgtcctgctc 346
            |||||||| ||||||||||| ||||||||
Sbjct: 2133 agctgcacgcgcttgacattctcctgctc 2105
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 51      aaacatcagatattaaaagtg 71
               |||||||||||||||||||||
Sbjct: 3040385 aaacatcagatattaaaagtg 3040365
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>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 51     aaacatcagatattaaaagtg 71
              |||||||||||||||||||||
Sbjct: 114403 aaacatcagatattaaaagtg 114423
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>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 262062

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   cctttacctcctcctatgca 206
             ||||||||||||||||||||
Sbjct: 46359 cctttacctcctcctatgca 46378
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>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 280  catcacccagagctgcctggctca 303
            |||| |||||||||||||||||||
Sbjct: 1542 catcgcccagagctgcctggctca 1565
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>gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trxr2) gene, exons 12 through 18,
            and complete cds
          Length = 16432

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 187  cctttacctcctcctatgca 206
            ||||||||||||||||||||
Sbjct: 1637 cctttacctcctcctatgca 1656
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>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                        
Query: 276  ttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgaca 335
            ||||||||||| ||||| |||| |  ||||||  ||||||| |  || || | |||||| 
Sbjct: 1346 ttagcatcaccaagagcagcctcggacatgtatttgtcagctaattgaactctcttgacg 1287

                                    
Query: 336  ttgtcctgctcctggacgagcatg 359
            || |||||||||||||| ||||||
Sbjct: 1286 ttctcctgctcctggacaagcatg 1263
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>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence
          Length = 202128

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   cctttacctcctcctatgca 206
             ||||||||||||||||||||
Sbjct: 32945 cctttacctcctcctatgca 32964
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>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 gtcagcaagctgcacacgct 330
           ||||||||||||||||||||
Sbjct: 242 gtcagcaagctgcacacgct 223
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>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence
          Length = 177402

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     tcagatattaaaagtggcat 75
              ||||||||||||||||||||
Sbjct: 141058 tcagatattaaaagtggcat 141077
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>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence
          Length = 163782

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     tcagatattaaaagtggcat 75
              ||||||||||||||||||||
Sbjct: 142564 tcagatattaaaagtggcat 142583
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>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence
          Length = 204813

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    tcagatattaaaagtggcat 75
             ||||||||||||||||||||
Sbjct: 95930 tcagatattaaaagtggcat 95911
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>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 280  catcacccagagctgcctggctca 303
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619
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>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    ttgacattgtcctgctcctg 349
              ||||||||||||||||||||
Sbjct: 126438 ttgacattgtcctgctcctg 126419
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>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 280  catcacccagagctgcctggctca 303
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935
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>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306,  section 128 of 469 of the
            complete genome
          Length = 11388

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 84   ggtgtaaaggcagctgccgtcgtcgctc 111
            |||||| |||| ||||||||||||||||
Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133
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>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 176974

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   cctttacctcctcctatgca 206
             ||||||||||||||||||||
Sbjct: 34662 cctttacctcctcctatgca 34681
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>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 280  catcacccagagctgcctggctca 303
            |||| |||||||||||||||||||
Sbjct: 1636 catcgcccagagctgcctggctca 1659
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>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 280  catcacccagagctgcctggctca 303
            |||| |||||||||||||||||||
Sbjct: 2003 catcgcccagagctgcctggctca 2026
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>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 280  catcacccagagctgcctggctca 303
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935
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>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    tggcatgcttaaaaggtgta 89
             ||||||||||||||||||||
Sbjct: 78235 tggcatgcttaaaaggtgta 78254
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>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    ttgacattgtcctgctcctg 349
              ||||||||||||||||||||
Sbjct: 106960 ttgacattgtcctgctcctg 106979
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>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 280  catcacccagagctgcctggctca 303
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619
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>ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smooth muscle)
           (predicted) (Lmod1_predicted), mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 176 cttgctgtgctcctttacctcctc 199
           ||||||| ||||||||||||||||
Sbjct: 648 cttgctgggctcctttacctcctc 625
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>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence
          Length = 158595

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   cctttacctcctcctatgca 206
             ||||||||||||||||||||
Sbjct: 27755 cctttacctcctcctatgca 27736
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>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete
              sequence
          Length = 230848

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 55     atcagatattaaaagtggcatgct 78
              ||||||||||||||||| ||||||
Sbjct: 127875 atcagatattaaaagtgccatgct 127852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,793,629
Number of Sequences: 3902068
Number of extensions: 2793629
Number of successful extensions: 48547
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 48324
Number of HSP's gapped (non-prelim): 174
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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