ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah59o24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ581660.1|HVU581660 Hordeum vulgare chloroplast partial mRN... 295 3e-77
2emb|AJ250662.1|HVU250662 Hordeum vulgare partial mRNA for putati... 295 3e-77
3gb|AY107847.1| Zea mays PCO116807 mRNA sequence 52 6e-04
4ref|XM_483478.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.16
5dbj|AK061879.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.16
6gb|DQ428851.1| Sorghum propinquum locus pSB0108 genomic sequence 44 0.16
7gb|DQ428850.1| Sorghum bicolor voucher PI585454 locus pSB0108 ge... 44 0.16
8gb|DQ428849.1| Sorghum bicolor voucher PI267408 locus pSB0108 ge... 44 0.16
9gb|DQ428848.1| Sorghum bicolor voucher PI221607 locus pSB0108 ge... 44 0.16
10gb|DQ428847.1| Sorghum bicolor voucher PI152702 locus pSB0108 ge... 44 0.16
11gb|DQ428846.1| Sorghum bicolor voucher NSL92371 locus pSB0108 ge... 44 0.16
12gb|DQ428845.1| Sorghum bicolor voucher NSL87666 locus pSB0108 ge... 44 0.16
13gb|DQ428844.1| Sorghum bicolor voucher NSL77217 locus pSB0108 ge... 44 0.16
14gb|DQ428843.1| Sorghum bicolor voucher NSL77034 locus pSB0108 ge... 44 0.16
15gb|DQ428842.1| Sorghum bicolor voucher NSL56174 locus pSB0108 ge... 44 0.16
16gb|DQ428841.1| Sorghum bicolor voucher NSL56003 locus pSB0108 ge... 44 0.16
17gb|DQ428840.1| Sorghum bicolor voucher NSL55243 locus pSB0108 ge... 44 0.16
18gb|DQ428839.1| Sorghum bicolor voucher NSL51365 locus pSB0108 ge... 44 0.16
19gb|DQ428838.1| Sorghum bicolor voucher NSL51030 locus pSB0108 ge... 44 0.16
20gb|DQ428837.1| Sorghum bicolor voucher NSL50875 locus pSB0108 ge... 44 0.16
21gb|DQ428836.1| Sorghum bicolor voucher BTx623 locus pSB0108 geno... 44 0.16
22dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
23dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
24dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
25dbj|AK072408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.16
26emb|BX649535.7| Zebrafish DNA sequence from clone DKEY-234E12 in... 42 0.62
27gb|AC163025.3| Mus musculus chromosome 1, clone RP23-80N7, compl... 40 2.5
28ref|XM_993524.1| PREDICTED: Mus musculus hypothetical LOC433485 ... 40 2.5
29ref|XM_485077.4| PREDICTED: Mus musculus hypothetical LOC433485,... 40 2.5
30ref|XM_925688.2| PREDICTED: Mus musculus hypothetical LOC433485,... 40 2.5
31gb|AC120544.9| Mus musculus chromosome 1, clone RP23-299N6, comp... 40 2.5
32gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, comp... 40 2.5
33dbj|AK159352.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 2.5
34emb|CT010505.18| Mouse DNA sequence from clone RP23-99P18 on chr... 40 2.5
35emb|AL831742.6| Mouse DNA sequence from clone RP23-11F9 on chrom... 40 2.5
36gb|AC120554.12| Mus musculus chromosome 1, clone RP24-285E3, com... 38 9.7
37gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequ... 38 9.7
38gb|AC132426.3| Mus musculus BAC clone RP23-312J19 from chromosom... 38 9.7
39gb|AC123872.4| Mus musculus BAC clone RP23-254P8 from 2, complet... 38 9.7
40emb|BX284698.6| Human DNA sequence from clone RP11-41M24 on chro... 38 9.7
41emb|AL590964.8| Human DNA sequence from clone RP11-505O14 on chr... 38 9.7
42gb|AY144986.1| Saccharomyces castellii clone Contig1869 BUL1 gen... 38 9.7
43emb|AL928811.8| Mouse DNA sequence from clone RP23-74P23 on chro... 38 9.7 
>emb|AJ581660.1|HVU581660 Hordeum vulgare chloroplast partial mRNA for nucleotide
            pyrophosphatase/phosphodiesterase (npp gene)
          Length = 1268

 Score =  295 bits (149), Expect = 3e-77
 Identities = 177/186 (95%), Gaps = 1/186 (0%)
 Strand = Plus / Minus

                                                                        
Query: 11   ataacgagtttncacccacctacttgcatgaantttttactagcacatataaattgtgca 70
            ||||||||  | ||||||||| |||||||||  |||||||||||||||||||||||||||
Sbjct: 1203 ataacgagcatacacccacct-cttgcatgatctttttactagcacatataaattgtgca 1145

                                                                        
Query: 71   gctgaccaattttattactcaacacatgcccacaattctattggatggatgaccctccat 130
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1144 gctgaccaattttattactcaacacatgcccacaattttattggatggatgaccctccat 1085

                                                                        
Query: 131  tacattgacatgacggccggacgatatcagctagctagcgagcgtngtggggaagcagct 190
            ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 1084 tacattgacatgacggccggacgatatgagctagctagcgagcgtggtggggaagcagct 1025

                  
Query: 191  gtcgtg 196
            ||||||
Sbjct: 1024 gtcgtg 1019
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>emb|AJ250662.1|HVU250662 Hordeum vulgare partial mRNA for putative protein (bci-6 gene)
          Length = 321

 Score =  295 bits (149), Expect = 3e-77
 Identities = 177/186 (95%), Gaps = 1/186 (0%)
 Strand = Plus / Minus

                                                                       
Query: 11  ataacgagtttncacccacctacttgcatgaantttttactagcacatataaattgtgca 70
           ||||||||  | ||||||||| |||||||||  |||||||||||||||||||||||||||
Sbjct: 262 ataacgagcatacacccacct-cttgcatgatctttttactagcacatataaattgtgca 204

                                                                       
Query: 71  gctgaccaattttattactcaacacatgcccacaattctattggatggatgaccctccat 130
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 203 gctgaccaattttattactcaacacatgcccacaattttattggatggatgaccctccat 144

                                                                       
Query: 131 tacattgacatgacggccggacgatatcagctagctagcgagcgtngtggggaagcagct 190
           ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 143 tacattgacatgacggccggacgatatgagctagctagcgagcgtggtggggaagcagct 84

                 
Query: 191 gtcgtg 196
           ||||||
Sbjct: 83  gtcgtg 78
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>gb|AY107847.1| Zea mays PCO116807 mRNA sequence
          Length = 1174

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| ||||||||||||||||||||
Sbjct: 883 gcgagcgtggtggggaagcagctgtcgtg 855
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>ref|XM_483478.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2234

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 168  gcgagcgtngtggggaagcagctgtcgtg 196
            |||||||| ||||||| ||||||||||||
Sbjct: 1903 gcgagcgtggtggggaggcagctgtcgtg 1875
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>dbj|AK061879.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E10, full
            insert sequence
          Length = 1355

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 168  gcgagcgtngtggggaagcagctgtcgtg 196
            |||||||| ||||||| ||||||||||||
Sbjct: 1074 gcgagcgtggtggggaggcagctgtcgtg 1046
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>gb|DQ428851.1| Sorghum propinquum locus pSB0108 genomic sequence
          Length = 704

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 480 gcgagcgttgtcgggaagcagctgtcgtg 452
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>gb|DQ428850.1| Sorghum bicolor voucher PI585454 locus pSB0108 genomic sequence
          Length = 541

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 445 gcgagcgttgtcgggaagcagctgtcgtg 417
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>gb|DQ428849.1| Sorghum bicolor voucher PI267408 locus pSB0108 genomic sequence
          Length = 560

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 464 gcgagcgttgtcgggaagcagctgtcgtg 436
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>gb|DQ428848.1| Sorghum bicolor voucher PI221607 locus pSB0108 genomic sequence
          Length = 541

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 445 gcgagcgttgtcgggaagcagctgtcgtg 417
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>gb|DQ428847.1| Sorghum bicolor voucher PI152702 locus pSB0108 genomic sequence
          Length = 545

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 449 gcgagcgttgtcgggaagcagctgtcgtg 421
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>gb|DQ428846.1| Sorghum bicolor voucher NSL92371 locus pSB0108 genomic sequence
          Length = 541

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 445 gcgagcgttgtcgggaagcagctgtcgtg 417
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>gb|DQ428845.1| Sorghum bicolor voucher NSL87666 locus pSB0108 genomic sequence
          Length = 554

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 458 gcgagcgttgtcgggaagcagctgtcgtg 430
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>gb|DQ428844.1| Sorghum bicolor voucher NSL77217 locus pSB0108 genomic sequence
          Length = 545

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 449 gcgagcgttgtcgggaagcagctgtcgtg 421
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>gb|DQ428843.1| Sorghum bicolor voucher NSL77034 locus pSB0108 genomic sequence
          Length = 541

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 445 gcgagcgttgtcgggaagcagctgtcgtg 417
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>gb|DQ428842.1| Sorghum bicolor voucher NSL56174 locus pSB0108 genomic sequence
          Length = 541

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 445 gcgagcgttgtcgggaagcagctgtcgtg 417
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>gb|DQ428841.1| Sorghum bicolor voucher NSL56003 locus pSB0108 genomic sequence
          Length = 541

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 445 gcgagcgttgtcgggaagcagctgtcgtg 417
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>gb|DQ428840.1| Sorghum bicolor voucher NSL55243 locus pSB0108 genomic sequence
          Length = 541

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 445 gcgagcgttgtcgggaagcagctgtcgtg 417
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>gb|DQ428839.1| Sorghum bicolor voucher NSL51365 locus pSB0108 genomic sequence
          Length = 541

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 445 gcgagcgttgtcgggaagcagctgtcgtg 417
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>gb|DQ428838.1| Sorghum bicolor voucher NSL51030 locus pSB0108 genomic sequence
          Length = 541

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 445 gcgagcgttgtcgggaagcagctgtcgtg 417
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>gb|DQ428837.1| Sorghum bicolor voucher NSL50875 locus pSB0108 genomic sequence
          Length = 541

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 445 gcgagcgttgtcgggaagcagctgtcgtg 417
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>gb|DQ428836.1| Sorghum bicolor voucher BTx623 locus pSB0108 genomic sequence
          Length = 541

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 168 gcgagcgtngtggggaagcagctgtcgtg 196
           |||||||| || |||||||||||||||||
Sbjct: 445 gcgagcgttgtcgggaagcagctgtcgtg 417
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 168      gcgagcgtngtggggaagcagctgtcgtg 196
                |||||||| ||||||| ||||||||||||
Sbjct: 26437900 gcgagcgtggtggggaggcagctgtcgtg 26437872
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>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1789_C07
          Length = 138944

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 168   gcgagcgtngtggggaagcagctgtcgtg 196
             |||||||| ||||||| ||||||||||||
Sbjct: 87452 gcgagcgtggtggggaggcagctgtcgtg 87424
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>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1770_H02
          Length = 170648

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 168    gcgagcgtngtggggaagcagctgtcgtg 196
              |||||||| ||||||| ||||||||||||
Sbjct: 167481 gcgagcgtggtggggaggcagctgtcgtg 167453
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>dbj|AK072408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083H19, full
            insert sequence
          Length = 2233

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 168  gcgagcgtngtggggaagcagctgtcgtg 196
            |||||||| ||||||| ||||||||||||
Sbjct: 1902 gcgagcgtggtggggaggcagctgtcgtg 1874
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>emb|BX649535.7| Zebrafish DNA sequence from clone DKEY-234E12 in linkage group 3,
             complete sequence
          Length = 151079

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    tttttactagcacatataaat 64
             |||||||||||||||||||||
Sbjct: 12435 tttttactagcacatataaat 12415
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>gb|AC163025.3| Mus musculus chromosome 1, clone RP23-80N7, complete sequence
          Length = 174774

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   acaattctattggatggatg 121
             ||||||||||||||||||||
Sbjct: 86685 acaattctattggatggatg 86666
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>ref|XM_993524.1| PREDICTED: Mus musculus hypothetical LOC433485 (LOC433485), mRNA
          Length = 2041

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  aattctattggatggatgac 123
            ||||||||||||||||||||
Sbjct: 1244 aattctattggatggatgac 1263
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>ref|XM_485077.4| PREDICTED: Mus musculus hypothetical LOC433485, transcript variant 1
            (LOC433485), mRNA
          Length = 2041

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  aattctattggatggatgac 123
            ||||||||||||||||||||
Sbjct: 1244 aattctattggatggatgac 1263
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>ref|XM_925688.2| PREDICTED: Mus musculus hypothetical LOC433485, transcript variant 6
            (LOC433485), mRNA
          Length = 2041

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  aattctattggatggatgac 123
            ||||||||||||||||||||
Sbjct: 1244 aattctattggatggatgac 1263
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>gb|AC120544.9| Mus musculus chromosome 1, clone RP23-299N6, complete sequence
          Length = 223752

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    acacatgcccacaattctat 111
             ||||||||||||||||||||
Sbjct: 91021 acacatgcccacaattctat 91040
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>gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, complete sequence
          Length = 230597

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     acacatgcccacaattctat 111
              ||||||||||||||||||||
Sbjct: 181512 acacatgcccacaattctat 181531
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>dbj|AK159352.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420017N16 product:amyloid beta (A4)
            precursor protein, full insert sequence
          Length = 2206

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   tttttactagcacatataaa 63
            ||||||||||||||||||||
Sbjct: 2118 tttttactagcacatataaa 2099
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>emb|CT010505.18| Mouse DNA sequence from clone RP23-99P18 on chromosome 16, complete
              sequence
          Length = 229346

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     tttttactagcacatataaa 63
              ||||||||||||||||||||
Sbjct: 136496 tttttactagcacatataaa 136515
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>emb|AL831742.6| Mouse DNA sequence from clone RP23-11F9 on chromosome 2, complete
            sequence
          Length = 230800

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  aattctattggatggatgac 123
            ||||||||||||||||||||
Sbjct: 4446 aattctattggatggatgac 4465
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>gb|AC120554.12| Mus musculus chromosome 1, clone RP24-285E3, complete sequence
          Length = 165083

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 92    acacatgcccacaattcta 110
             |||||||||||||||||||
Sbjct: 80784 acacatgcccacaattcta 80766
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>gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequence
          Length = 95357

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    ttttattactcaacacatg 98
             |||||||||||||||||||
Sbjct: 40260 ttttattactcaacacatg 40278
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>gb|AC132426.3| Mus musculus BAC clone RP23-312J19 from chromosome 2, complete sequence
          Length = 189633

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 17     agtttncacccacctacttgca 38
              ||||| ||||||||||||||||
Sbjct: 146758 agttttcacccacctacttgca 146779
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>gb|AC123872.4| Mus musculus BAC clone RP23-254P8 from 2, complete sequence
          Length = 185953

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 17     agtttncacccacctacttgca 38
              ||||| ||||||||||||||||
Sbjct: 182101 agttttcacccacctacttgca 182080
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>emb|BX284698.6| Human DNA sequence from clone RP11-41M24 on chromosome 1, complete
             sequence
          Length = 84876

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 112   tggatggatgaccctccat 130
             |||||||||||||||||||
Sbjct: 66819 tggatggatgaccctccat 66837
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>emb|AL590964.8| Human DNA sequence from clone RP11-505O14 on chromosome 6, complete
             sequence
          Length = 198644

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 60    taaattgtgcagctgaccaattttatt 86
             ||||||||||||||||  |||||||||
Sbjct: 33941 taaattgtgcagctgatgaattttatt 33967
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>gb|AY144986.1| Saccharomyces castellii clone Contig1869 BUL1 gene, complete cds
          Length = 2913

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 76   ccaattttattactcaaca 94
            |||||||||||||||||||
Sbjct: 2423 ccaattttattactcaaca 2441
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>emb|AL928811.8| Mouse DNA sequence from clone RP23-74P23 on chromosome 2, complete
              sequence
          Length = 222061

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 17     agtttncacccacctacttgca 38
              ||||| ||||||||||||||||
Sbjct: 140306 agttttcacccacctacttgca 140327


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,425,271
Number of Sequences: 3902068
Number of extensions: 1425271
Number of successful extensions: 124623
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124500
Number of HSP's gapped (non-prelim): 123
length of query: 196
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 174
effective length of database: 17,147,199,772
effective search space: 2983612760328
effective search space used: 2983612760328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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