ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbah60m17 | 708 | BJ486200 | not_full | ref|XM_479442.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1646 | 98 | not_full | LIP_RHIMI (P19515) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase) Length = 363 | 13 | -- | --- | - | -- | --- | - |
| rbah60m16 | 443 | BJ486199 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 427 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 153 | -- | --- | - | -- | --- | - |
| rbah60m15 | 657 | BJ486198 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 452 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 161 | -- | --- | - | -- | --- | - |
| rbah60m14 | 560 | BJ486197 | not_full | gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 | 29 | not_full | SC10A_CANFA (O46669) Sodium channel protein type 10 alpha subunit (Sodium channel protein type X alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.8) (NaNG) Length = 1962 | 14 | -- | --- | - | -- | --- | - |
| rbah60m13 | 205 | BJ486196 | not_full | gb|AY123422.1| Triticum aestivum putative Rieske Fe-S precursor protein mRNA, complete cds Length = 866 | 19 | not_full | UCRIA_WHEAT (Q7X9A6) Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 222 | 35 | -- | --- | - | -- | --- | - |
| rbah60m12 | 332 | BJ486195 | not_full | ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1439 | 34 | not_full | GOX1_ARATH (Q9LRS0) Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 (EC 1.1.3.15) (Glycolate oxidase 1) (GOX 1) (Short chain alpha-hydroxy acid oxidase 1) Length = 367 | 20 | -- | --- | - | -- | --- | - |
| rbah60m09 | 508 | BJ552843 | not_full | emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 | 50 | not_full | ENPL_HORVU (P36183) Endoplasmin homolog precursor (GRP94 homolog) Length = 809 | 153 | -- | --- | - | -- | --- | - |
| rbah60m07 | 451 | BJ552842 | not_full | emb|AJ310426.1|HVU310426 Hordeum vulgare mRNA for cathepsin B (cathB gene) Length = 1277 | 62 | not_full | CPR4_CAEEL (P43508) Cathepsin B-like cysteine proteinase 4 precursor (EC 3.4.22.-) (Cysteine protease-related 4) Length = 335 | 188 | -- | --- | - | -- | --- | - |
| rbah60m06 | 679 | BJ552841 | not_full | gb|AY136627.1| Hordeum vulgare subsp. vulgare plasma membrane P-type proton pump ATPase (Ha1) mRNA, complete cds Length = 3446 | 225 | not_full | PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump) Length = 951 | 35 | -- | --- | - | -- | --- | - |
| rbah60m03 | 627 | BJ552840 | not_full | gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1577 | 206 | not_full | ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) Length = 388 | 62 | -- | --- | - | -- | --- | - |
| rbah60m02 | 569 | BJ486194 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 500 | not_full | HSP70_MAIZE (P11143) Heat shock 70 kDa protein Length = 645 | 500 | -- | --- | - | -- | --- | - |
| rbah60m01 | 516 | BJ486193 | not_full | gb|BT009369.1| Triticum aestivum clone wlm96.pk028.e8:fis, full insert mRNA sequence Length = 1328 | 33 | not_full | MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (EC 3.6.3.44) (Glutathione S-conjugate transporting ATPase 3) (ATP-energized glutathione S-conjugate pump 3) Length = 1514 | 67 | -- | --- | - | -- | --- | - |
| rbah60l23 | 674 | BJ486192 | not_full | dbj|D86327.1| Triticum aestivum mRNA for catalase, complete cds Length = 1573 | 173 | not_full | CATA1_WHEAT (Q43206) Catalase-1 (EC 1.11.1.6) Length = 492 | 126 | -- | --- | - | -- | --- | - |
| rbah60l22 | 629 | BJ486191 | not_full | gb|AF466199.1| Sorghum bicolor putative receptor protein kinase, aminoalcoholphosphotransferase, putative growth-regulating factor 1, putative GAG-POL precursor, putative GAG-POL precursor, putative RIRE2 orf3, putative anthocyanin regulatory C1, putative | 33 | not_full | YAUB_SCHPO (Q10166) Hypothetical UPF0012 protein C26A3.11 in chromosome I (EC 3.5.-.-) Length = 322 | 18 | -- | --- | - | -- | --- | - |
| rbah60l19 | 468 | BJ486190 | not_full | ref|NM_017514.2| Homo sapiens plexin A3 (PLXNA3), mRNA Length = 6762 | 30 | not_full | LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A chain) Length = 3084 | 6 | -- | --- | - | -- | --- | - |
| rbah60l18 | 705 | BJ552839 | not_full | gb|BT009270.1| Triticum aestivum clone wlk8.pk0008.g5:fis, full insert mRNA sequence Length = 788 | 173 | not_full | FPPS_MAIZE (P49353) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 350 | 53 | -- | --- | - | -- | --- | - |
| rbah60l17 | 712 | BJ486189 | not_full | ref|XM_483817.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1976 | 165 | not_full | ABCF2_HUMAN (Q9UG63) ATP-binding cassette sub-family F member 2 (Iron-inhibited ABC transporter 2) Length = 623 | 500 | -- | --- | - | -- | --- | - |
| rbah60l12 | 722 | BJ552838 | not_full | ref|XM_506873.1| PREDICTED Oryza sativa (japonica cultivar-group), B1215B07.34 mRNA Length = 1334 | 156 | not_full | ADK1_ARATH (Q9SF85) Adenosine kinase 1 (EC 2.7.1.20) (AK 1) (Adenosine 5NULL-phosphotransferase 1) Length = 344 | 71 | -- | --- | - | -- | --- | - |
| rbah60l11 | 717 | BJ486188 | not_full | dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 | 49 | not_full | DDR48_YEAST (P18899) Stress protein DDR48 (DNA damage-responsive protein 48) (DDRP 48) (YP 75) (Flocculent-specific protein) Length = 429 | 197 | -- | --- | - | -- | --- | - |
| rbah60l09 | 445 | BJ486187 | not_full | dbj|AK111792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099N07, full insert sequence Length = 852 | 11 | not_full | LPXB_CHRVO (Q7NVY1) Lipid-A-disaccharide synthase (EC 2.4.1.182) Length = 386 | 1 | -- | --- | - | -- | --- | - |
| rbah60l08 | 530 | BJ486186 | not_full | emb|AJ555613.1|HVU555613 Hordeum vulgare subsp. vulgare mRNA for metallothionein-like protein type 3 (mt-3a gene) Length = 334 | 123 | not_full | MT3_CARPA (Q96386) Metallothionein-like protein type 3 (MT-3) Length = 65 | 12 | -- | --- | - | -- | --- | - |
| rbah60l06 | 661 | BJ486185 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 460 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 165 | -- | --- | - | -- | --- | - |
| rbah60l05 | 658 | BJ486184 | not_full | gb|AY625680.1| Triticum aestivum MYB transcription factor (MYB80) mRNA, complete cds Length = 1199 | 72 | not_full | K0256_HUMAN (Q93073) Protein KIAA0256 Length = 1101 | 41 | -- | --- | - | -- | --- | - |
| rbah60l04 | 207 | BJ552837 | not_full | emb|AJ508228.2|HVU508228 Hordeum vulgare subsp. vulgare mRNA for ADP-ribosylation factor 1-like protein Length = 934 | 365 | not_full | ARF1_SOLTU (P51824) ADP-ribosylation factor 1 Length = 196 | 103 | -- | --- | - | -- | --- | - |
| rbah60l03 | 613 | BJ552836 | not_full | emb|AJ508228.2|HVU508228 Hordeum vulgare subsp. vulgare mRNA for ADP-ribosylation factor 1-like protein Length = 934 | 500 | not_full | ARF_ORYSA (P51823) ADP-ribosylation factor Length = 180 | 311 | -- | --- | - | -- | --- | - |
| rbah60l01 | 533 | BJ552835 | not_full | emb|AJ005840.1|TAE5840 Triticum aestivum mRNA for thioredoxin M Length = 781 | 163 | not_full | TRXM_WHEAT (Q9ZP21) Thioredoxin M-type, chloroplast precursor (TRX-M) Length = 175 | 309 | -- | --- | - | -- | --- | - |
| rbah60k24 | 450 | BJ486183 | not_full | gb|AY625683.1| Triticum aestivum NAC domain transcription factor (NAC2) mRNA, complete cds Length = 1450 | 44 | not_full | DBP10_CANAL (Q5ANB2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-) Length = 908 | 12 | -- | --- | - | -- | --- | - |
| rbah60k23 | 663 | BJ486182 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 411 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 160 | -- | --- | - | -- | --- | - |
| rbah60k21 | 342 | BJ486181 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 54 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 20 | -- | --- | - | -- | --- | - |
| rbah60k20 | 678 | BJ486180 | not_full | dbj|AB063117.1| Hordeum vulgare HvAPX1 mRNA for peroxisome type ascorbate peroxidase, complete cds Length = 1089 | 113 | not_full | APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1.11) Length = 291 | 151 | -- | --- | - | -- | --- | - |
| rbah60k18 | 578 | BJ552834 | not_full | dbj|AK069830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030M09, full insert sequence Length = 778 | 71 | not_full | TREY_MYCTU (Q10768) Putative maltooligosyl trehalose synthase (EC 5.4.99.15) ((1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase) Length = 765 | 9 | -- | --- | - | -- | --- | - |
| rbah60k17 | 775 | BJ552833 | not_full | emb|X51608.1|TAPRKGEN Triticum aestivum RNA for phosphoribulokinase Length = 1533 | 430 | not_full | KPPR_WHEAT (P26302) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) Length = 404 | 18 | -- | --- | - | -- | --- | - |
| rbah60k15 | 710 | BJ486179 | not_full | gb|AC125143.4| Mus musculus BAC clone RP24-342H13 from 17, complete sequence Length = 219259 | 28 | not_full | SEY1_YARLI (Q6C3B0) Protein SEY1 Length = 938 | 3 | -- | --- | - | -- | --- | - |
| rbah60k14 | 617 | BJ486178 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 35 | not_full | IL6RB_RAT (P40190) Interleukin-6 receptor beta chain precursor (IL-6R-beta) (Interleukin 6 signal transducer) (Membrane glycoprotein 130) (gp130) (CD130 antigen) Length = 918 | 4 | -- | --- | - | -- | --- | - |
| rbah60k13 | 523 | BJ486177 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 409 | not_full | PEVR1_HUMAN (Q9HAB3) Porcine endogenous retrovirus A receptor 1 precursor (PERV-A receptor 1) (Protein GPR172A) Length = 445 | 2 | -- | --- | - | -- | --- | - |
| rbah60k12 | 626 | BJ486176 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 459 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 163 | -- | --- | - | -- | --- | - |
| rbah60k11 | 705 | BJ486175 | not_full | ref|XM_466651.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2967 | 44 | not_full | CATR_ATRNU (P41210) Caltractin (Centrin) Length = 167 | 61 | -- | --- | - | -- | --- | - |
| rbah60k10 | 714 | BJ486174 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 140 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 26 | -- | --- | - | -- | --- | - |
| rbah60k09 | 727 | BJ486173 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 147 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 26 | -- | --- | - | -- | --- | - |
| rbah60k08 | 688 | BJ486172 | not_full | emb|AJ419775.1|HVU419775 Hordeum vulgare mRNA for glutathione-S-transferase I subunit (gstI gene) Length = 895 | 135 | not_full | GSTF1_MAIZE (P12653) Glutathione S-transferase I (EC 2.5.1.18) (GST-I) (GST-29) (GST class-phi) Length = 213 | 121 | -- | --- | - | -- | --- | - |
| rbah60k06 | 718 | BJ552832 | not_full | emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 | 63 | not_full | ENPL_HORVU (P36183) Endoplasmin homolog precursor (GRP94 homolog) Length = 809 | 176 | -- | --- | - | -- | --- | - |
| rbah60k05 | 694 | BJ486171 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 442 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 161 | -- | --- | - | -- | --- | - |
| rbah60k04 | 729 | BJ486170 | not_full | ref|NM_192854.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1941 | 163 | not_full | WRK19_ARATH (Q9SZ67) Probable WRKY transcription factor 19 (WRKY DNA-binding protein 19) Length = 1895 | 9 | -- | --- | - | -- | --- | - |
| rbah60k03 | 765 | BJ486169 | not_full | gb|AF027808.1|AF027808 Zea mays HCF106 precursor protein (Hcf106) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1125 | 500 | not_full | YD22_SCHPO (Q10250) Hypothetical protein C56F8.02 in chromosome I Length = 1517 | 10 | -- | --- | - | -- | --- | - |
| rbah60j23 | 157 | BJ486168 | not_full | gb|AC097658.2| Homo sapiens BAC clone RP11-364L4 from 4, complete sequence Length = 165247 | 35 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah60j21 | 641 | BJ486167 | not_full | emb|X60343.1|HVGADPH H.vulgare GADPH mRNA for glycolytic glyceraldehyde-3-phosphate dehydrogenase Length = 1365 | 500 | not_full | G3PX_HORVU (P26517) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) Length = 337 | 258 | -- | --- | - | -- | --- | - |
| rbah60j20 | 558 | BJ486166 | not_full | dbj|AB164680.1| Hordeum vulgare HVD1 mRNA for ATP-dependent RNA helicase, complete cds Length = 2799 | 29 | not_full | GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-) (Germline helicase 1) Length = 763 | 24 | -- | --- | - | -- | --- | - |
| rbah60j17 | 539 | BJ552831 | not_full | gb|BT018950.1| Zea mays clone Contig110.F mRNA sequence Length = 636 | 500 | not_full | H3_PINPS (Q711T2) Histone H3 Length = 135 | 271 | -- | --- | - | -- | --- | - |
| rbah60j15 | 610 | BJ486165 | not_full | gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 | 21 | not_full | GLUQ_RHOBA (Q7UHE2) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs) Length = 329 | 15 | -- | --- | - | -- | --- | - |
| rbah60j14 | 513 | BJ486164 | not_full | dbj|AK062303.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H11, full insert sequence Length = 1394 | 36 | not_full | Y5G0_ENCCU (Q8STJ2) Hypothetical protein ECU05_1600/ECU11_0130 Length = 298 | 5 | -- | --- | - | -- | --- | - |
