Clone Information

BLAST Search Result

Clone Name	rbah60m06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton ...	255	8e-68
2	PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proto...	201	1e-51
3	PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) ...	192	6e-49
4	PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) ...	189	5e-48
5	PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) ...	186	6e-47
6	PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) ...	184	3e-46
7	PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) ...	183	5e-46
8	PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) ...	182	8e-46
9	PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) ...	176	6e-44
10	PMA2_LYCES (P23980) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proto...	171	2e-42
11	PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proto...	171	2e-42
12	PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6...	169	7e-42
13	PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) ...	169	9e-42
14	PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proto...	168	1e-41
15	PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proto...	168	2e-41
16	PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) ...	127	2e-29
17	PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6...	96	1e-19
18	CING_HUMAN (Q9P2M7) Cingulin	44	5e-04
19	PMA_AVESA (Q7M290) Plasma membrane ATPase (EC 3.6.3.6) (Proton p...	44	5e-04
20	PMAX_ARATH (Q9T0E0) Putative ATPase, plasma membrane-like	40	0.005
21	CING_MOUSE (P59242) Cingulin	36	0.12
22	ESC1_SCHPO (Q04635) Protein esc1	33	0.80
23	VE2_HPV08 (P06422) Regulatory protein E2	32	1.8
24	KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-ass...	32	2.3
25	SBE2_YEAST (P42223) Protein SBE2	31	4.0
26	ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tum...	30	5.2
27	GCM2_MOUSE (O09102) Chorion-specific transcription factor GCMb (...	30	6.7
28	SMG_DROME (Q23972) Protein Smaug	30	6.7
29	POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP123...	30	6.7
30	SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Sp...	30	6.7
31	RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1	30	6.7
32	TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)	30	8.8
33	ASPP2_MOUSE (Q8CG79) Apoptosis-stimulating of p53 protein 2 (Tum...	30	8.8
34	BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) ...	30	8.8
35	SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Sp...	30	8.8

>PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)|
          Length = 951

 Score =  255 bits (652), Expect = 8e-68
 Identities = 127/127 (100%), Positives = 127/127 (100%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG
Sbjct: 825  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 884

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT
Sbjct: 885  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 944

Query: 318  INQNYTV 298
            INQNYTV
Sbjct: 945  INQNYTV 951

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>PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4)|
          Length = 952

 Score =  201 bits (512), Expect = 1e-51
 Identities = 100/127 (78%), Positives = 115/127 (90%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            L+SI+FY PLDI KF IR++LSG+AW+NLL NKTAFTTK++YGK EREAQWA AQRTLHG
Sbjct: 828  LYSIIFYLPLDIMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHG 887

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQ PE  +  LFN+K+SYRELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDI+T
Sbjct: 888  LQPPEATN--LFNEKNSYRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIET 945

Query: 318  INQNYTV 298
            I Q+YTV
Sbjct: 946  IQQHYTV 952

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>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump 9)|
          Length = 954

 Score =  192 bits (489), Expect = 6e-49
 Identities = 94/127 (74%), Positives = 112/127 (88%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            L+SIVFY PLDI KF IR+ LSGRAWDN+++NKTAFT+K++YGKGEREAQWA AQRTLHG
Sbjct: 830  LYSIVFYIPLDILKFIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHG 889

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQ  + +   +FNDKS+YRELSEIA+QAKRRAE+ARLRE +TLKGHVESVVK KGLDI+ 
Sbjct: 890  LQPAQTSD--MFNDKSTYRELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEA 947

Query: 318  INQNYTV 298
            I Q+YT+
Sbjct: 948  IQQHYTL 954

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>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump 5)|
          Length = 948

 Score =  189 bits (481), Expect = 5e-48
 Identities = 94/127 (74%), Positives = 110/127 (86%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            L+S + Y PLD+ KF IR+VLSG+AW NLL+NKTAFTTK++YGK EREAQWA AQRTLHG
Sbjct: 824  LYSFLTYIPLDLLKFGIRYVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHG 883

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQ  E   + +FN+K+SY ELS+IAEQAKRRAE+ RLRE+NTLKGHVESVVKLKGLDIDT
Sbjct: 884  LQPAE--KNNIFNEKNSYSELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDT 941

Query: 318  INQNYTV 298
            I Q+YTV
Sbjct: 942  IQQHYTV 948

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>PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) (Proton pump 6)|
          Length = 949

 Score =  186 bits (472), Expect = 6e-47
 Identities = 88/127 (69%), Positives = 111/127 (87%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            ++SIV Y PLDI KF  R+ LSG+AW+N+++N+TAFTTK++YG+GEREAQWA AQRTLHG
Sbjct: 827  IYSIVTYIPLDILKFITRYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHG 886

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            L+ PE    ++F D ++Y ELSEIAEQAK+RAE+ARLRE++TLKGHVESVVKLKGLDID 
Sbjct: 887  LKPPE----SMFEDTATYTELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDN 942

Query: 318  INQNYTV 298
            +NQ+YTV
Sbjct: 943  LNQHYTV 949

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>PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) (Proton pump 8)|
          Length = 948

 Score =  184 bits (466), Expect = 3e-46
 Identities = 92/127 (72%), Positives = 107/127 (84%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            ++SI+ Y PLDI KF IR+ L+G+AWDN++  KTAFTTK++YGKGEREAQWA AQRTLHG
Sbjct: 828  VYSIITYIPLDILKFIIRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHG 887

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            L  PE     +FND  +  ELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDIDT
Sbjct: 888  LPPPE----AMFNDNKN--ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDT 941

Query: 318  INQNYTV 298
            I Q+YTV
Sbjct: 942  IQQHYTV 948

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>PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump 2)|
          Length = 947

 Score =  183 bits (464), Expect = 5e-46
 Identities = 95/127 (74%), Positives = 109/127 (85%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            L+SIV YFPLD+FKF IR++LSG+AW NL +NKTAFT K++YGK EREAQWA AQRTLHG
Sbjct: 824  LYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWALAQRTLHG 883

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQ  E  +  +F +K SYRELSEIAEQAKRRAEIARLREL+TLKGHVESVVKLKGLDI+T
Sbjct: 884  LQPKEAVN--IFPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET 941

Query: 318  INQNYTV 298
               +YTV
Sbjct: 942  -PSHYTV 947

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>PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump 1)|
          Length = 948

 Score =  182 bits (462), Expect = 8e-46
 Identities = 92/127 (72%), Positives = 106/127 (83%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            ++SIV YFP DI KF IR++LSG+AW +L  N+TAFTTK++YG GEREAQWA AQRTLHG
Sbjct: 824  IYSIVTYFPQDILKFAIRYILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHG 883

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQ  E  +  +F +K SYRELSEIAEQAKRRAEIARLREL+TLKGHVESV KLKGLDIDT
Sbjct: 884  LQPKEDVN--IFPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDT 941

Query: 318  INQNYTV 298
               +YTV
Sbjct: 942  AGHHYTV 948

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>PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump 3)|
          Length = 948

 Score =  176 bits (446), Expect = 6e-44
 Identities = 91/127 (71%), Positives = 106/127 (83%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            L+SIVFYFPLDI KF IR++L+G AW N++ N+TAFTTK+NYG  EREAQWA AQRTLHG
Sbjct: 825  LYSIVFYFPLDIMKFAIRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHG 884

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQ  E A+  +  ++  YRELSEIA QAKRRAEIARLREL+TLKGHVESVVKLKGLDI+T
Sbjct: 885  LQNTETAN--VVPERGGYRELSEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET 942

Query: 318  INQNYTV 298
               +YTV
Sbjct: 943  AG-HYTV 948

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>PMA2_LYCES (P23980) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)|
           (Fragment)
          Length = 704

 Score =  171 bits (433), Expect = 2e-42
 Identities = 83/127 (65%), Positives = 107/127 (84%)
 Frame = -2

Query: 678 LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
           L+++VFYFPLDI KF IR+ LSGRAWD +L+ + AFT K+++GK +RE QWA AQRTLHG
Sbjct: 581 LYNLVFYFPLDIIKFLIRYALSGRAWDLVLEQRIAFTRKKDFGKEQRELQWAHAQRTLHG 640

Query: 498 LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
           LQ P+     LF++ +++ EL+++AE+AKRRAEIAR REL+TLKGHVESVVKLKGLDI+T
Sbjct: 641 LQVPD---IKLFSEATNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIET 697

Query: 318 INQNYTV 298
           I Q+YTV
Sbjct: 698 IQQSYTV 704

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>PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)|
          Length = 957

 Score =  171 bits (432), Expect = 2e-42
 Identities = 82/127 (64%), Positives = 106/127 (83%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            ++++VFY PLDI KFFIR+ LSGRAWD + + + AFT K+++GK +RE QWA AQRTLHG
Sbjct: 834  IYNLVFYIPLDIIKFFIRYALSGRAWDLVFERRIAFTRKKDFGKEQRELQWAHAQRTLHG 893

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQ P+     LF++ +++ EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKGLDI+T
Sbjct: 894  LQVPDT---KLFSEATNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIET 950

Query: 318  INQNYTV 298
            I Q YTV
Sbjct: 951  IQQAYTV 957

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>PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump|
            11)
          Length = 956

 Score =  169 bits (428), Expect = 7e-42
 Identities = 82/127 (64%), Positives = 106/127 (83%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            L++IVFY PLDI KF IR+ LSGRAWD +++ + AFT ++++GK +RE QWA AQRTLHG
Sbjct: 833  LYNIVFYIPLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHG 892

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQAP+     +F +++ + ELS++AE+AKRRAEIARLREL+TLKGHVESVV+LKGLDI+T
Sbjct: 893  LQAPDA---KMFPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIET 949

Query: 318  INQNYTV 298
            I Q YTV
Sbjct: 950  IQQAYTV 956

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>PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) (Proton pump 4)|
          Length = 960

 Score =  169 bits (427), Expect = 9e-42
 Identities = 81/127 (63%), Positives = 105/127 (82%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            L++I+FY PLD  KFFIR+ LSGRAWD +++ + AFT ++++GK +RE QWA AQRTLHG
Sbjct: 837  LYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHG 896

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQAP+     +F D++   EL+++AE+AKRRAEIARLREL+TLKGHVESVV+LKGLDI+T
Sbjct: 897  LQAPDT---KMFTDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIET 953

Query: 318  INQNYTV 298
            I Q YTV
Sbjct: 954  IQQAYTV 960

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>PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3)|
          Length = 956

 Score =  168 bits (426), Expect = 1e-41
 Identities = 80/127 (62%), Positives = 106/127 (83%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            L++IVFY PLD+  F IR+ LSG+AWD +++ + AFT K+++GK +RE QWA AQRTLHG
Sbjct: 833  LYNIVFYIPLDLXXFLIRYALSGKAWDLVIEQRIAFTRKKDFGKEQRELQWAHAQRTLHG 892

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQ P+P    +F++ +++ EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKGLDI+T
Sbjct: 893  LQVPDP---KIFSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIET 949

Query: 318  INQNYTV 298
            I Q YTV
Sbjct: 950  IQQAYTV 956

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>PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)|
          Length = 956

 Score =  168 bits (425), Expect = 2e-41
 Identities = 81/127 (63%), Positives = 106/127 (83%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            L++IV Y PLD+ KF IR+ LSG+AWD +L+ + AFT K+++GK  RE QWA AQRTLHG
Sbjct: 833  LYNIVTYIPLDLIKFLIRYALSGKAWDLVLEQRIAFTRKKDFGKELRELQWAHAQRTLHG 892

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQ P+P    +F++ +++ EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKGLDI+T
Sbjct: 893  LQVPDP---KIFSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIET 949

Query: 318  INQNYTV 298
            I Q+YTV
Sbjct: 950  IQQSYTV 956

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>PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)|
          Length = 961

 Score =  127 bits (320), Expect = 2e-29
 Identities = 64/128 (50%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            +F+IV Y  LD  KF +R+ LSG++WD +++ +TA T K+N+G+ ER A WAT +RT HG
Sbjct: 838  IFNIVTYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHG 897

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            L+  +   +    +++S  EL+ +AE+AKRRAEIAR+REL TLKG VES  KLKG D++ 
Sbjct: 898  LETGQKPVY----ERNSATELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGYDLED 953

Query: 318  IN-QNYTV 298
             N  NYT+
Sbjct: 954  PNSNNYTI 961

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>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump|
            10)
          Length = 947

 Score = 95.9 bits (237), Expect = 1e-19
 Identities = 53/127 (41%), Positives = 75/127 (59%)
 Frame = -2

Query: 678  LFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHG 499
            L+S++FY PLD+ KF   + LSG AW+ +L  KTAFT K++YGK +       +QR    
Sbjct: 832  LYSLIFYIPLDVIKFVFHYALSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQR---- 887

Query: 498  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
                   S +    + S    S IAEQ +RRAEIARL E++++  H+ESV+KLK +D   
Sbjct: 888  -------SRSAEELRGSRSRASWIAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRM 940

Query: 318  INQNYTV 298
            I   +TV
Sbjct: 941  IRAAHTV 947

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>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = -2

Query: 537 EAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLK 367
           E Q    Q  L  +Q PEPA   L  D    REL E   + K+R E     R REL  LK
Sbjct: 436 ETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALK 495

Query: 366 GHVESVVKLKGLDIDTINQNY 304
           G ++  V  +  +++ + Q Y
Sbjct: 496 GALKEEVASRDQEVEHVRQQY 516

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>PMA_AVESA (Q7M290) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)|
           (Fragments)
          Length = 110

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 26/38 (68%), Positives = 27/38 (71%)
 Frame = -2

Query: 525 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 412
           A A +TLHGLQAPE  S  L NDK    ELSEIAEQAK
Sbjct: 77  APALKTLHGLQAPESTSLNLPNDK----ELSEIAEQAK 110

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>PMAX_ARATH (Q9T0E0) Putative ATPase, plasma membrane-like|
          Length = 813

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 17/33 (51%), Positives = 28/33 (84%), Gaps = 3/33 (9%)
 Frame = -2

Query: 678 LFSIVFYFPLDIFKFFIRFVLSGRA---WDNLL 589
           L++I+F+FPLDI KF IR++L+G+A   +DN++
Sbjct: 738 LYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMV 770

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>CING_MOUSE (P59242) Cingulin|
          Length = 1191

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
 Frame = -2

Query: 591 LQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 412
           LQN      +E   +   EAQ    Q  L   Q+P+    +L  D    REL E   + K
Sbjct: 412 LQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGK 471

Query: 411 RRAE---IARLRELNTLKGHVESVVKLKGLDIDTINQNY 304
           +R E     R REL  LKG ++  V     +++ +   Y
Sbjct: 472 QRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQY 510

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>ESC1_SCHPO (Q04635) Protein esc1|
          Length = 413

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 29/101 (28%), Positives = 45/101 (44%)
 Frame = -3

Query: 602 GTTSCRTRLLSPPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSSLRSL 423
           G++S     + P   TT++   +HS +PHR        L+   T SS+T    VSS  S+
Sbjct: 115 GSSSSYVYSVPPTNSTTSQASAKHSAVPHRSSQFQSTTLTPSTTDSSST---DVSSSDSV 171

Query: 422 SKPREELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTKTTP 300
           S            SS+++  T+S       +TS  S+  TP
Sbjct: 172 STS---------ASSSNASNTVS-------VTSPASSSATP 196

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>VE2_HPV08 (P06422) Regulatory protein E2|
          Length = 498

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
 Frame = -3

Query: 569 PPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHSSTTRAAT-VSSLRSLSKPREELRLQ 393
           P  RT  +   R S   HR  S + + LSR+    STT + +  SSL    +PR   R +
Sbjct: 252 PSSRTRPQKEQRRSRSRHRTRSRS-RSLSRVRAVGSTTVSRSRSSSLTKAVRPRSRSRSR 310

Query: 392 G*GSSTHSR--GTLSPW*SSRALTSTPSTKT 306
           G  ++T  R  G  SP    R+ + +PST T
Sbjct: 311 GRATATSRRRAGRGSPR-RRRSTSRSPSTNT 340

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>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein|
           5.3) (Ultrahigh sulfur keratin-associated protein 5.3)
           (Keratin-associated protein 5-9) (Keratin-associated
           protein 5.9) (UHS KerB-like)
          Length = 238

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 24/76 (31%), Positives = 28/76 (36%)
 Frame = +3

Query: 444 GSCSCR*RVCGKPAQVLEGHGVFSVR*PTVPPSHLCRSSLWW*KQSCSAGGCPRPCHSAQ 623
           GSC C    C KP     G G           S  C+SS    K SCS   C +PC S  
Sbjct: 122 GSCGCSQCSCYKPCCCSSGCG-----------SSCCQSSCC--KPSCSQSSCCKPCCSQS 168

Query: 624 IG*RT*KCQVGSRTQC 671
              +   C  G  + C
Sbjct: 169 SCCKPCCCSSGCGSSC 184

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>SBE2_YEAST (P42223) Protein SBE2|
          Length = 864

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 17/131 (12%)
 Frame = -3

Query: 605 PGTTSCRTRLLSPPKRTTAKVRGRHSGLPHREHSMAFKHLSR---LPTHSSTTRAATVSS 435
           PG+   +TR  S   +T   +    + +P R++S++   LSR   LP  S+TT +   S 
Sbjct: 183 PGSILQKTRTASSADKTICSMSTITTCIPSRQNSVSTPKLSRTVGLPGSSNTTNSIAASQ 242

Query: 434 LRSLSKPREELRLQG*GSSTHSRGTLSPW*SSRALTSTP--------------STKTTPC 297
              +S+    L+     ++T     L P      +T TP              +T+ TP 
Sbjct: 243 TSFISENDSPLKHHCMSTATIQEPKLMP------ITKTPYVHSNSTSVILPYKTTQLTPS 296

Query: 296 EEFGHWTKQHD 264
           + +    +Q+D
Sbjct: 297 QRYRLRKEQND 307

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>ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor|
           p53-binding protein 2) (p53-binding protein 2) (p53BP2)
           (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen)
          Length = 1128

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = -2

Query: 525 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 346
           AT ++ L  L+  +        ++   + L EIAE  +     A+L+++  LKGHVE   
Sbjct: 150 ATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQE-----AKLKKVRALKGHVEQKR 204

Query: 345 KLKGLDIDTINQ 310
              G  ++ I Q
Sbjct: 205 LSNGKLVEEIEQ 216

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>GCM2_MOUSE (O09102) Chorion-specific transcription factor GCMb (Glial cells|
           missing homolog 2) (GCM motif protein 2) (mGCMb)
          Length = 504

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = -2

Query: 507 LHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLD 328
           +H    PE  S T     +  R+++   +  KRR+E    R    ++GH+ S   L+  +
Sbjct: 156 VHDHPRPESKSETEGRRSALKRQMASFYQPQKRRSEEPEARSTQDIRGHLNSTAALEPTE 215

Query: 327 I 325
           +
Sbjct: 216 L 216

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>SMG_DROME (Q23972) Protein Smaug|
          Length = 999

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 313 PKLHRVRNLGIGPNNMTSVLERDWNG 236
           PK+H V+  G+GPNN  ++ +  WNG
Sbjct: 769 PKMHHVKPAGVGPNN-GNINKPRWNG 793

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>POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-)
            (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1
          Length = 2601

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
 Frame = -3

Query: 602  GTTSCRTRLLSPPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSSLRSL 423
            GT S  +R+ S    T++   G     P R  +++   L+    HS + R+A   ++R+ 
Sbjct: 1815 GTESRSSRMGSQSSVTSSA--GSVPPAPRRAPAVSAASLAS-SAHSRSVRSAP--AMRAA 1869

Query: 422  SKPREELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTKTTPCEEFGHWTKQHD-IRIGAR 246
            S     +R    GS+ H  G  S   S R  +  PS+ +TP    G    Q D +R+ AR
Sbjct: 1870 SAGARSVRSAQSGSTGHRAGAFSVAGSVRQPSGPPSSVSTPAAIRGLTRDQFDAVRVRAR 1929

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>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 221

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
 Frame = -3

Query: 569 PPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHS------STTRAATVSSLRSLSKPRE 408
           PP+R  +   GR S  P R      +  SR  + S      S +R+ T S  RS SK R 
Sbjct: 106 PPRRYGSSGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRS 165

Query: 407 ELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTK 309
             R +   SS+ SR        SR+ +  P++K
Sbjct: 166 ARRSKS-KSSSVSRSRSRSRSRSRSRSPPPTSK 197

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>RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1|
          Length = 334

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
 Frame = -2

Query: 588 QNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYREL-SEIAEQAK 412
           + K + +     GK  R  +  +  RT      P P SH+  +++SS+R   S   ++ +
Sbjct: 79  RRKRSRSRSRGRGKPYRVQRSRSKSRTRRSRSRPRPRSHSRSSERSSHRRTRSRSRDRDR 138

Query: 411 RRAEIARLRELNTLKGHVESVVKLKGLDIDTI 316
           R+      RE    KG  + V  +K  D   I
Sbjct: 139 RKVRDKEKREKEKDKGKDKEVHSIKRGDSGNI 170

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>TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)|
          Length = 1197

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = -1

Query: 355  VRGEAQGP*HRHHQPKLH-----RVRNLGIGPNNMTSVLERDWNGAP 230
            V GE QGP   H    L      R R  G+GP    +  E +WN AP
Sbjct: 1112 VPGE-QGPSEEHRTEALRALLSARKRKAGLGPTEEEATGEEEWNSAP 1157

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>ASPP2_MOUSE (Q8CG79) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor|
           p53-binding protein 2) (p53BP2) (53BP2) (Fragment)
          Length = 1088

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = -2

Query: 525 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 346
           AT ++ L  L+  +        ++   + L EIAE  +     A+L+++  LKGHVE   
Sbjct: 110 ATKEQRLKFLKQQDQRQQQQAAEQEKLKRLREIAESQE-----AKLKKVRALKGHVEQKR 164

Query: 345 KLKGLDIDTINQ 310
              G  ++ I Q
Sbjct: 165 LSNGKLVEEIEQ 176

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>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger|
           protein rfp-1)
          Length = 828

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = -2

Query: 570 TTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIAR 391
           T KE Y K  ++++W   + T++ L+       +L     S  +  +  E+A ++   A 
Sbjct: 439 TVKEEYNKTVKQSEWDEMKATVNTLR-------SLNKTMKSQMQRMKDREKASQKEHSAV 491

Query: 390 LRELNTLKGHVESVV 346
             EL TLK  +E  V
Sbjct: 492 KTELKTLKDQLEKSV 506

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>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
 Frame = -3

Query: 569 PPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHS------STTRAATVSSLRSLSKPRE 408
           PP+R      GR S  P R      +  SR  + S      S +R+ T S  RS SK R 
Sbjct: 105 PPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRS 164

Query: 407 ELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTKTTP 300
             R +   SS+ SR        SR+ +  P +K  P
Sbjct: 165 ARRSKS-KSSSVSRSRSRSRSRSRSRSPPPVSKREP 199


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,664,313
Number of Sequences: 219361
Number of extensions: 2080974
Number of successful extensions: 5490
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 5281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5470
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result