>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  308 bits (789), Expect(2) = e-103
 Identities = 151/151 (100%), Positives = 151/151 (100%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG
Sbjct: 277 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 336

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN
Sbjct: 337 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 396

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSFYG 262
           VKRVQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 397 VKRVQLADTYMSQAALGDANQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = e-103
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -3

Query: 214 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 101
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  260 bits (664), Expect(2) = 2e-82
 Identities = 121/151 (80%), Positives = 139/151 (92%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFG
Sbjct: 287 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFG 346

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVY DEVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+N
Sbjct: 347 ALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQEN 406

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSFYG 262
           VKRVQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 407 VKRVQLADKYMSEAALGDANNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 2e-82
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -3

Query: 217 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 101
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  253 bits (645), Expect(2) = 1e-80
 Identities = 120/151 (79%), Positives = 136/151 (90%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFG
Sbjct: 287 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFG 346

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+N
Sbjct: 347 ALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQEN 406

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSFYG 262
           VKRVQLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 407 VKRVQLAETYLSQAALGDANADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 1e-80
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -3

Query: 214 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 101
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  252 bits (643), Expect(2) = 3e-79
 Identities = 118/151 (78%), Positives = 136/151 (90%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TD V  E VVK+VD FPGQSIDFFG
Sbjct: 285 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFG 344

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVY DEVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+N
Sbjct: 345 ALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQEN 404

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSFYG 262
           VKRVQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 405 VKRVQLADQYMSSAALGDANKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 3e-79
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -3

Query: 214 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 107
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  276 bits (705), Expect = 6e-74
 Identities = 129/151 (85%), Positives = 143/151 (94%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFG
Sbjct: 277 FSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFG 336

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+N
Sbjct: 337 ALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQEN 396

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSFYG 262
           VKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 397 VKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  276 bits (705), Expect = 6e-74
 Identities = 129/151 (85%), Positives = 143/151 (94%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFG
Sbjct: 274 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFG 333

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+N
Sbjct: 334 ALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQEN 393

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSFYG 262
           VKRVQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 394 VKRVQLADKYLSEAALGQANDDAMKTGAFYG 424

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  263 bits (672), Expect = 4e-70
 Identities = 122/151 (80%), Positives = 141/151 (93%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFG
Sbjct: 287 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFG 346

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+N
Sbjct: 347 ALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQEN 406

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSFYG 262
           VKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 407 VKRVQLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  262 bits (670), Expect = 7e-70
 Identities = 121/150 (80%), Positives = 141/150 (94%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFG
Sbjct: 283 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFG 342

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+N
Sbjct: 343 ALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQEN 402

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSFY 265
           VKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 403 VKRVQLADKYLNEAALGEANEDAMKTGSFF 432

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  261 bits (668), Expect = 1e-69
 Identities = 125/149 (83%), Positives = 139/149 (93%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFG
Sbjct: 291 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFG 350

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+N
Sbjct: 351 ALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQEN 410

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSF 268
           VKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 411 VKRVQLAETYLKEAALGDANADAINTGNF 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  260 bits (664), Expect = 3e-69
 Identities = 124/147 (84%), Positives = 139/147 (94%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFG
Sbjct: 286 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFG 345

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+N
Sbjct: 346 ALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQEN 405

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTG 274
           VKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 406 VKRVQLAETYLKEAALGDANADAINTG 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  259 bits (663), Expect = 4e-69
 Identities = 120/149 (80%), Positives = 139/149 (93%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFG
Sbjct: 287 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFG 346

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+N
Sbjct: 347 ALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQEN 406

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSF 268
           VKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 407 VKRVQLADKYMSEAALGDANQDAIKRGTF 435

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  256 bits (653), Expect = 6e-68
 Identities = 123/150 (82%), Positives = 134/150 (89%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TDNV  E VVKIVD FPGQSIDFFG
Sbjct: 291 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFG 350

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+N
Sbjct: 351 ALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQEN 410

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSFY 265
           VKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 411 VKRVQLADKYLKEAALGDANADAINNGSFF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  251 bits (641), Expect = 2e-66
 Identities = 113/150 (75%), Positives = 139/150 (92%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFG
Sbjct: 289 FSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFG 348

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+N
Sbjct: 349 ALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQEN 408

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSFY 265
           VKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 409 VKRVQLADKYLNEAALGNANEDAIKSGSFF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  243 bits (619), Expect = 6e-64
 Identities = 110/150 (73%), Positives = 137/150 (91%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V ++ +V++VD  PGQSIDFFG
Sbjct: 291 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFG 350

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+N
Sbjct: 351 ALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQEN 410

Query: 354 VKRVQLADTYMSQAALGDANQDAMKTGSFY 265
           VKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 411 VKRVQLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  210 bits (535), Expect = 3e-54
 Identities = 97/126 (76%), Positives = 112/126 (88%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRM+KFYWAPTR+DRIG+C GIF+TD V  E +VK+VDTFPGQSIDFFG
Sbjct: 284 FSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFG 343

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDDEVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+N
Sbjct: 344 ALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQEN 403

Query: 354 VKRVQL 337
           VKRV+L
Sbjct: 404 VKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  184 bits (466), Expect = 3e-46
 Identities = 90/136 (66%), Positives = 106/136 (77%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEK+YW PTR+DRIGVC GIFQ DNV    V  +VDTFPGQSIDFFG
Sbjct: 260 FSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFG 319

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALRARVYDD VR+W+  TG++ IG++LVN+R   V   +  M +  L++YG  LV EQ+N
Sbjct: 320 ALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQEN 378

Query: 354 VKRVQLADTYMSQAAL 307
           VKRVQLAD Y+S A L
Sbjct: 379 VKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  152 bits (384), Expect = 1e-36
 Identities = 68/130 (52%), Positives = 93/130 (71%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYW P RD+++G+  GIF  D +S   V K+VD+FP QSIDFF 
Sbjct: 160 FSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFS 219

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALR+R+YD+++R ++   G EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  
Sbjct: 220 ALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKR 279

Query: 354 VKRVQLADTY 325
           ++  QL D Y
Sbjct: 280 IETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  147 bits (370), Expect = 4e-35
 Identities = 67/130 (51%), Positives = 91/130 (70%)
 Frame = -1

Query: 714 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 535
           FSTLYAPLIRDGRMEKFYW P RDD++G+  GIF  D +S   + ++VDTFP QSIDFF 
Sbjct: 160 FSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFS 219

Query: 534 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDN 355
           ALR+R+YD ++R ++   G E I  R+VNS + P  F++P  ++  L+E G++++ EQ  
Sbjct: 220 ALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQR 279

Query: 354 VKRVQLADTY 325
           V   QL D Y
Sbjct: 280 VDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 6e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -1

Query: 576 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 397
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 868

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
 Frame = +1

Query: 265  VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXXEGHGPVP 444
            VEG+  HR L  + +   AHVG     +LDI  L DE   V            +  G   
Sbjct: 671  VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728

Query: 445  RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE- 615
            + +  +A V        +  + V+  + Q+T +   L  EG++ +   L  +T  +  E 
Sbjct: 729  KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHEL 780

Query: 616  -DTLADTDTVVTGGSPVELLHTTITD 690
               L   + V+  G PV   H  + D
Sbjct: 781  WTQLGHNEPVIDAGWPVFDAHALVQD 806

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -1

Query: 432 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 277
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 276 GSFYG*KILHTHPPSLAA 223
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 493 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 618
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = -1

Query: 579 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 400
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 399 KLLEYGHMLVQEQDNVKRV 343
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 329 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 433
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -1

Query: 432 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 277
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 276 GSFYG*KILHTHPPSLAA 223
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -1

Query: 495 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 388
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,734,738
Number of Sequences: 219361
Number of extensions: 2046483
Number of successful extensions: 6419
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6416
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)