| Clone Name | rbah60k06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 Score = 827 bits (417), Expect = 0.0 Identities = 442/451 (98%) Strand = Plus / Minus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2371 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 2312 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2311 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 2252 Query: 388 ctcgccgtctgcttcaggccctcgctatcgctgtcctgggcaaccttgtcacggagctcc 447 |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 2251 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 2192 Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2191 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 2132 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccaccca 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2131 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccatcca 2072 Query: 568 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2071 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 2012 Query: 628 tcaatgccctncgtgtccagggccttcttccaccagtcggtcagctncttgaacgactcc 687 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2011 tcaatgccctccgtgtccagggccttcttccaccagtcggtcagctccttgaacgactcc 1952 Query: 688 ttgaggtccttgagcttcgagtccttgccga 718 ||||||||||||||||||||||||||||||| Sbjct: 1951 ttgaggtccttgagcttcgagtccttgccga 1921 Score = 240 bits (121), Expect = 5e-60 Identities = 176/192 (91%), Gaps = 13/192 (6%) Strand = Plus / Minus Query: 7 ggtacagtagtacattacacggacaaaacccc--gtatcacgatcgatgattaatcgtct 64 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2633 ggtacagtagtacattacacggacaaaaccccccgtatcacgatcgatgattaatcgtct 2574 Query: 65 tccgcgcggtaaaaatggacgtccctcaaaaccatcacatttccagtccaacacttcttt 124 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2573 tccgcgcggtaaaaatggacgtccctcaaaaccatcacatttccagtccaacatttcttt 2514 Query: 125 ct-----aatgagagctaaatgggcggggcgacatgagcaaactacagctcgtccttgtc 179 || ||||| |||||||| |||||| |||||| |||||||||||||||||||| Sbjct: 2513 ctaatgaaatgaaagctaaat-----gggcgatatgagc-aactacagctcgtccttgtc 2460 Query: 180 gtactgctcgtg 191 |||||||||||| Sbjct: 2459 gtactgctcgtg 2448
>gb|AY103537.1| Zea mays PCO098403 mRNA sequence Length = 2806 Score = 585 bits (295), Expect = e-164 Identities = 410/449 (91%) Strand = Plus / Minus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 ||||||||||| |||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 2402 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2343 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2342 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 2283 Query: 388 ctcgccgtctgcttcaggccctcgctatcgctgtcctgggcaaccttgtcacggagctcc 447 ||||||||||||||||| ||||||| || |||||||||| |||||||| ||||||||| Sbjct: 2282 ctcgccgtctgcttcagctcctcgctctcattgtcctgggcgaccttgtcgcggagctcc 2223 Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2222 ttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctgc 2163 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccaccca 567 ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 2162 ttgctcgagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccg 2103 Query: 568 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 627 |||||||||||||| || || |||||||||| |||||||||||||||||||||||| ||| Sbjct: 2102 tacttggaggtgacgacgacgcagggggtgtcgtgcagccggttgctgatcttcaccgag 2043 Query: 628 tcaatgccctncgtgtccagggccttcttccaccagtcggtcagctncttgaacgactcc 687 || | | || | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 2042 tccacgttctcgctctccagggccttcttccaccagtcagtcagctccttgaacgactcc 1983 Query: 688 ttgaggtccttgagcttcgagtccttgcc 716 ||||| ||||||||||||||||||||||| Sbjct: 1982 ttgagctccttgagcttcgagtccttgcc 1954 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 actacagctcgtccttgtcg 180 |||||||||||||||||||| Sbjct: 2503 actacagctcgtccttgtcg 2484
>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence Length = 2511 Score = 561 bits (283), Expect = e-156 Identities = 407/449 (90%) Strand = Plus / Minus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 ||||||||||| |||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 2172 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2113 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 || ||||||||||| || ||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 2112 aactccttggggtcggggagggtgaacccgctctccatcagggccgtctggtacaccagc 2053 Query: 388 ctcgccgtctgcttcaggccctcgctatcgctgtcctgggcaaccttgtcacggagctcc 447 ||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 2052 ctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctcc 1993 Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1992 ttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctgc 1933 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccaccca 567 ||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 1932 ttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttggcgctccacccg 1873 Query: 568 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 627 |||||||||||||| || || ||||||||| |||||||||| |||||| |||||| ||| Sbjct: 1872 tacttggaggtgacgacgacggagggggtgtcgtgcagccggctgctgaccttcaccgag 1813 Query: 628 tcaatgccctncgtgtccagggccttcttccaccagtcggtcagctncttgaacgactcc 687 || | || || | |||||||||||||||||||| || ||||||| ||||||||||||| Sbjct: 1812 tccacgctctcgctctccagggccttcttccaccactccgtcagctccttgaacgactcc 1753 Query: 688 ttgaggtccttgagcttcgagtccttgcc 716 ||||||||||||||| ||||||||||||| Sbjct: 1752 ttgaggtccttgagcctcgagtccttgcc 1724
>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full insert sequence Length = 2708 Score = 557 bits (281), Expect = e-155 Identities = 408/451 (90%) Strand = Plus / Minus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 2416 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 2357 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 ||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 2356 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 2297 Query: 388 ctcgccgtctgcttcaggccctcgctatcgctgtcctgggcaaccttgtcacggagctcc 447 ||||||||||||||| || |||||| |||||||||||||| |||||||||||||| ||| Sbjct: 2296 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 2237 Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 2236 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 2177 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccaccca 567 ||||| || ||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 2176 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 2117 Query: 568 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 627 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| ||| Sbjct: 2116 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccgag 2057 Query: 628 tcaatgccctncgtgtccagggccttcttccaccagtcggtcagctncttgaacgactcc 687 || | || || ||||| || ||||||||||||||||||||||||| |||||| |||||| Sbjct: 2056 tccacgctctcggtgtcaagagccttcttccaccagtcggtcagctccttgaaggactcc 1997 Query: 688 ttgaggtccttgagcttcgagtccttgccga 718 ||||||||||||||||| ||||||||||||| Sbjct: 1996 ttgaggtccttgagcttagagtccttgccga 1966 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 75 aaaaatggacgtccctcaaaaccatcacattt 106 ||||||||||||||||| |||||||||||||| Sbjct: 2608 aaaaatggacgtccctcgaaaccatcacattt 2577
>dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G02, full insert sequence Length = 2026 Score = 557 bits (281), Expect = e-155 Identities = 408/451 (90%) Strand = Plus / Minus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 1738 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1679 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 ||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 1678 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 1619 Query: 388 ctcgccgtctgcttcaggccctcgctatcgctgtcctgggcaaccttgtcacggagctcc 447 ||||||||||||||| || |||||| |||||||||||||| |||||||||||||| ||| Sbjct: 1618 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 1559 Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1558 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 1499 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccaccca 567 ||||| || ||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1498 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 1439 Query: 568 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 627 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| ||| Sbjct: 1438 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccgag 1379 Query: 628 tcaatgccctncgtgtccagggccttcttccaccagtcggtcagctncttgaacgactcc 687 || | || || ||||| || ||||||||||||||||||||||||| |||||| |||||| Sbjct: 1378 tccacgctctcggtgtcaagagccttcttccaccagtcggtcagctccttgaaggactcc 1319 Query: 688 ttgaggtccttgagcttcgagtccttgccga 718 ||||||||||||||||| ||||||||||||| Sbjct: 1318 ttgaggtccttgagcttagagtccttgccga 1288 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 75 aaaaatggacgtccctcaaaaccatcacattt 106 ||||||||||||||||| |||||||||||||| Sbjct: 1930 aaaaatggacgtccctcgaaaccatcacattt 1899
>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full insert sequence Length = 1944 Score = 549 bits (277), Expect = e-153 Identities = 407/451 (90%) Strand = Plus / Minus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 1656 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1597 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 ||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 1596 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 1537 Query: 388 ctcgccgtctgcttcaggccctcgctatcgctgtcctgggcaaccttgtcacggagctcc 447 ||||||||||||||| || |||||| |||||||||||||| |||||||||||||| ||| Sbjct: 1536 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 1477 Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1476 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 1417 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccaccca 567 ||||| || ||||| |||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 1416 ttgctggcatccgagagggtctgtgactgcatgatcttctccgtgttggcgctccacccg 1357 Query: 568 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 627 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| ||| Sbjct: 1356 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccgag 1297 Query: 628 tcaatgccctncgtgtccagggccttcttccaccagtcggtcagctncttgaacgactcc 687 || | || || ||||| || ||||||||||||||||||||||||| |||||| |||||| Sbjct: 1296 tccacgctctcggtgtcaagagccttcttccaccagtcggtcagctccttgaaggactcc 1237 Query: 688 ttgaggtccttgagcttcgagtccttgccga 718 ||||||||||||||||| ||||||||||||| Sbjct: 1236 ttgaggtccttgagcttagagtccttgccga 1206 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 75 aaaaatggacgtccctcaaaaccatcacattt 106 ||||||||||||||||| |||||||||||||| Sbjct: 1848 aaaaatggacgtccctcgaaaccatcacattt 1817
>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds Length = 2731 Score = 549 bits (277), Expect = e-153 Identities = 407/451 (90%) Strand = Plus / Minus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| | || Sbjct: 2410 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctgaaggcg 2351 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 ||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 2350 aagtccttgggatcagggaggttgaagccgctctccatgagggccgtctggtacaccagc 2291 Query: 388 ctcgccgtctgcttcaggccctcgctatcgctgtcctgggcaaccttgtcacggagctcc 447 ||||||||||||||| || |||||| |||||||||||||| |||||||||||||| ||| Sbjct: 2290 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 2231 Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 2230 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 2171 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccaccca 567 ||||| || ||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 2170 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 2111 Query: 568 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 627 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| ||| Sbjct: 2110 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccgag 2051 Query: 628 tcaatgccctncgtgtccagggccttcttccaccagtcggtcagctncttgaacgactcc 687 || | || || ||||| || ||||||||||||||||||||||||| |||||| |||||| Sbjct: 2050 tccacgctctcggtgtcaagagccttcttccaccagtcggtcagctccttgaaggactcc 1991 Query: 688 ttgaggtccttgagcttcgagtccttgccga 718 ||||||||||||||||| ||||||||||||| Sbjct: 1990 ttgaggtccttgagcttagagtccttgccga 1960 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 75 aaaaatggacgtccctcaaaaccatcacattt 106 ||||||||||||||||| |||||||||||||| Sbjct: 2602 aaaaatggacgtccctcgaaaccatcacattt 2571
>gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence Length = 1544 Score = 547 bits (276), Expect = e-152 Identities = 408/450 (90%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 |||| |||||| |||||||||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 1232 acggtcgcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcg 1173 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1172 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 1113 Query: 388 ctcgccgtctgcttcaggccctcgctatcgctgtcctgggcaaccttgtcacggagctcc 447 |||||||| |||||||| ||||||| ||| |||||||||| |||||||| ||||||||| Sbjct: 1112 ctcgccgtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctcc 1053 Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1052 ttgatgatggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgc 993 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccaccca 567 ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 992 ttgctcgagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccg 933 Query: 568 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 627 ||||||||||||||||| || |||||||||| |||||||||||||||||||||||| ||| Sbjct: 932 tacttggaggtgaccacgacgcagggggtgtcgtgcagccggttgctgatcttcaccgag 873 Query: 628 tcaatgccctncgtgtccagggccttcttccaccagtcggtcagctncttgaacgactcc 687 || | | || | ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 872 tccacgttctcgctctccagggccttcttccaccagtcagtcagctccttgaacgactcc 813 Query: 688 ttgaggtccttgagc-ttcgagtccttgcc 716 ||||| ||| ||||| |||||||||||||| Sbjct: 812 ttgagctcc-tgagctttcgagtccttgcc 784
>gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence Length = 1546 Score = 488 bits (246), Expect = e-134 Identities = 333/362 (91%) Strand = Plus / Minus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 |||| |||||| |||||||||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 1246 acggtcgcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcg 1187 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1186 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 1127 Query: 388 ctcgccgtctgcttcaggccctcgctatcgctgtcctgggcaaccttgtcacggagctcc 447 |||||||| |||||||| ||||||| ||| |||||||||| |||||||| ||||||||| Sbjct: 1126 ctcgccgtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctcc 1067 Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1066 ttgatgatggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgc 1007 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccaccca 567 ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 1006 ttgctcgagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccg 947 Query: 568 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 627 ||||||||||||||||| || |||||||||| |||||||||||||||||||||||| ||| Sbjct: 946 tacttggaggtgaccacgacgcagggggtgtcgtgcagccggttgctgatcttcaccgag 887 Query: 628 tc 629 || Sbjct: 886 tc 885 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 643 tccagggccttcttccaccagtcggtcagctncttgaacgactccttgaggtccttgagc 702 ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| Sbjct: 871 tccagggccttcttccaccagtcagtcagctccttgaacgactccttgagctccttgagc 812 Query: 703 ttcgagtccttgcc 716 |||||||||||||| Sbjct: 811 ttcgagtccttgcc 798
>gb|BT016887.1| Zea mays clone Contig720 mRNA sequence Length = 719 Score = 472 bits (238), Expect = e-130 Identities = 331/362 (91%) Strand = Plus / Plus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 ||||||||||| |||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 339 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 398 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 399 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 458 Query: 388 ctcgccgtctgcttcaggccctcgctatcgctgtcctgggcaaccttgtcacggagctcc 447 ||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 459 ctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctcc 518 Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 519 ttgatgatggggtgcctggggttgatctccaccaccctcttgccgcgcatgtacgcctgc 578 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccaccca 567 ||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 579 ttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttggcgctccacccg 638 Query: 568 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 627 |||||||||||||| || || ||||||||| |||||||||| |||||| |||||| ||| Sbjct: 639 tacttggaggtgacgacgacggagggggtgtcgtgcagccggctgctgaccttcaccgag 698 Query: 628 tc 629 || Sbjct: 699 tc 700
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 385 bits (194), Expect = e-103 Identities = 276/304 (90%) Strand = Plus / Plus Query: 415 tcgctgtcctgggcaaccttgtcacggagctccttgatgatggggtgccgggggttgatc 474 |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 9854 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 9913 Query: 475 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 534 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 9914 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 9973 Query: 535 tgcatgatcttctccatgttggagctccacccatacttggaggtgaccaccacacagggg 594 |||||||||||||||||||||| ||||||||| |||||||| || |||||||| |||||| Sbjct: 9974 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 10033 Query: 595 gtgttgtgcagccggttgctgatcttcacagagtcaatgccctncgtgtccagggccttc 654 |||| | ||||||||||||||||||||| ||||| | || || ||||| || |||||| Sbjct: 10034 gtgtcgctcagccggttgctgatcttcaccgagtccacgctctcggtgtcaagagccttc 10093 Query: 655 ttccaccagtcggtcagctncttgaacgactccttgaggtccttgagcttcgagtccttg 714 ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 10094 ttccaccagtcggtcagctccttgaaggactccttgaggtccttgagcttagagtccttg 10153 Query: 715 ccga 718 |||| Sbjct: 10154 ccga 10157 Score = 178 bits (90), Expect = 2e-41 Identities = 132/146 (90%) Strand = Plus / Plus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 9601 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 9660 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 ||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 9661 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 9720 Query: 388 ctcgccgtctgcttcaggccctcgct 413 ||||||||||||||| || |||||| Sbjct: 9721 ttcgccgtctgcttcaagctctcgct 9746 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 75 aaaaatggacgtccctcaaaaccatcacattt 106 ||||||||||||||||| |||||||||||||| Sbjct: 9409 aaaaatggacgtccctcgaaaccatcacattt 9440
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 385 bits (194), Expect = e-103 Identities = 276/304 (90%) Strand = Plus / Plus Query: 415 tcgctgtcctgggcaaccttgtcacggagctccttgatgatggggtgccgggggttgatc 474 |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 29929148 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 29929207 Query: 475 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 534 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 29929208 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 29929267 Query: 535 tgcatgatcttctccatgttggagctccacccatacttggaggtgaccaccacacagggg 594 |||||||||||||||||||||| ||||||||| |||||||| || |||||||| |||||| Sbjct: 29929268 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 29929327 Query: 595 gtgttgtgcagccggttgctgatcttcacagagtcaatgccctncgtgtccagggccttc 654 |||| | ||||||||||||||||||||| ||||| | || || ||||| || |||||| Sbjct: 29929328 gtgtcgctcagccggttgctgatcttcaccgagtccacgctctcggtgtcaagagccttc 29929387 Query: 655 ttccaccagtcggtcagctncttgaacgactccttgaggtccttgagcttcgagtccttg 714 ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 29929388 ttccaccagtcggtcagctccttgaaggactccttgaggtccttgagcttagagtccttg 29929447 Query: 715 ccga 718 |||| Sbjct: 29929448 ccga 29929451 Score = 178 bits (90), Expect = 2e-41 Identities = 132/146 (90%) Strand = Plus / Plus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 29928895 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 29928954 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 ||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 29928955 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 29929014 Query: 388 ctcgccgtctgcttcaggccctcgct 413 ||||||||||||||| || |||||| Sbjct: 29929015 ttcgccgtctgcttcaagctctcgct 29929040 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 75 aaaaatggacgtccctcaaaaccatcacattt 106 ||||||||||||||||| |||||||||||||| Sbjct: 29928703 aaaaatggacgtccctcgaaaccatcacattt 29928734
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 385 bits (194), Expect = e-103 Identities = 276/304 (90%) Strand = Plus / Plus Query: 415 tcgctgtcctgggcaaccttgtcacggagctccttgatgatggggtgccgggggttgatc 474 |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 5296 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 5355 Query: 475 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 534 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 5356 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 5415 Query: 535 tgcatgatcttctccatgttggagctccacccatacttggaggtgaccaccacacagggg 594 |||||||||||||||||||||| ||||||||| |||||||| || |||||||| |||||| Sbjct: 5416 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 5475 Query: 595 gtgttgtgcagccggttgctgatcttcacagagtcaatgccctncgtgtccagggccttc 654 |||| | ||||||||||||||||||||| ||||| | || || ||||| || |||||| Sbjct: 5476 gtgtcgctcagccggttgctgatcttcaccgagtccacgctctcggtgtcaagagccttc 5535 Query: 655 ttccaccagtcggtcagctncttgaacgactccttgaggtccttgagcttcgagtccttg 714 ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 5536 ttccaccagtcggtcagctccttgaaggactccttgaggtccttgagcttagagtccttg 5595 Query: 715 ccga 718 |||| Sbjct: 5596 ccga 5599 Score = 178 bits (90), Expect = 2e-41 Identities = 132/146 (90%) Strand = Plus / Plus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 5043 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 5102 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 ||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 5103 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 5162 Query: 388 ctcgccgtctgcttcaggccctcgct 413 ||||||||||||||| || |||||| Sbjct: 5163 ttcgccgtctgcttcaagctctcgct 5188 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 75 aaaaatggacgtccctcaaaaccatcacattt 106 ||||||||||||||||| |||||||||||||| Sbjct: 4851 aaaaatggacgtccctcgaaaccatcacattt 4882
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 385 bits (194), Expect = e-103 Identities = 276/304 (90%) Strand = Plus / Plus Query: 415 tcgctgtcctgggcaaccttgtcacggagctccttgatgatggggtgccgggggttgatc 474 |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 124661 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 124720 Query: 475 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 534 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 124721 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 124780 Query: 535 tgcatgatcttctccatgttggagctccacccatacttggaggtgaccaccacacagggg 594 |||||||||||||||||||||| ||||||||| |||||||| || |||||||| |||||| Sbjct: 124781 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 124840 Query: 595 gtgttgtgcagccggttgctgatcttcacagagtcaatgccctncgtgtccagggccttc 654 |||| | ||||||||||||||||||||| ||||| | || || ||||| || |||||| Sbjct: 124841 gtgtcgctcagccggttgctgatcttcaccgagtccacgctctcggtgtcaagagccttc 124900 Query: 655 ttccaccagtcggtcagctncttgaacgactccttgaggtccttgagcttcgagtccttg 714 ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 124901 ttccaccagtcggtcagctccttgaaggactccttgaggtccttgagcttagagtccttg 124960 Query: 715 ccga 718 |||| Sbjct: 124961 ccga 124964 Score = 178 bits (90), Expect = 2e-41 Identities = 132/146 (90%) Strand = Plus / Plus Query: 268 acggccgcgtccgggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 327 ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 124408 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 124467 Query: 328 aagtccttggggtcaggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 387 ||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 124468 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 124527 Query: 388 ctcgccgtctgcttcaggccctcgct 413 ||||||||||||||| || |||||| Sbjct: 124528 ttcgccgtctgcttcaagctctcgct 124553 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 75 aaaaatggacgtccctcaaaaccatcacattt 106 ||||||||||||||||| |||||||||||||| Sbjct: 124216 aaaaatggacgtccctcgaaaccatcacattt 124247
>gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds Length = 2947 Score = 87.7 bits (44), Expect = 5e-14 Identities = 134/164 (81%) Strand = Plus / Minus Query: 466 gggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagg 525 ||||| ||||| || |||||||| ||||||||||| ||||||||||| || || || || Sbjct: 2135 gggttaatctcgagcaccctcttcccgcgcatgtatgcctgcttgctggcatcggaaaga 2076 Query: 526 gtctgtgcctgcatgatcttctccatgttggagctccacccatacttggaggtgaccacc 585 ||||| | |||||| |||||||||||||| | ||||| ||||| || || ||||| || Sbjct: 2075 gtctgagactgcataatcttctccatgtttgcactccaaccatatttcgatgtgacaaca 2016 Query: 586 acacagggggtgttgtgcagccggttgctgatcttcacagagtc 629 || || || ||||| | || ||||||||| |||||||| ||||| Sbjct: 2015 acgcaaggagtgttatccaaccggttgctaatcttcacggagtc 1972 Score = 44.1 bits (22), Expect = 0.63 Identities = 42/49 (85%) Strand = Plus / Minus Query: 670 agctncttgaacgactccttgaggtccttgagcttcgagtccttgccga 718 |||| |||||| ||||||||||| ||||||| ||| || ||||| |||| Sbjct: 1931 agctccttgaaggactccttgagatccttgatctttgactccttcccga 1883
>ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.1 mRNA, complete cds Length = 2707 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccat 551 || | || ||||| || || || | |||||||||| ||||||| Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccat 2104
>ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.2 mRNA, complete cds Length = 2707 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccat 551 || | || ||||| || || || | |||||||||| ||||||| Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccat 2104
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial sequence (ESSA project) Length = 77567 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 76717 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 76776 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccat 551 || | || ||||| || || || | |||||||||| ||||||| Sbjct: 76777 ttattagcatccgagagagtttgggactgcatgatcctctccat 76820
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project) Length = 108459 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 3355 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 3414 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccat 551 || | || ||||| || || || | |||||||||| ||||||| Sbjct: 3415 ttattagcatccgagagagtttgggactgcatgatcctctccat 3458
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 20012 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 20071 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccat 551 || | || ||||| || || || | |||||||||| ||||||| Sbjct: 20072 ttattagcatccgagagagtttgggactgcatgatcctctccat 20115
>gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, complete cds Length = 2702 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2201 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2142 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccat 551 || | || ||||| || || || | |||||||||| ||||||| Sbjct: 2141 ttattagcatccgagagagtttgggactgcatgatcctctccat 2098
>gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, complete cds Length = 2472 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2153 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2094 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccat 551 || | || ||||| || || || | |||||||||| ||||||| Sbjct: 2093 ttattagcatccgagagagtttgggactgcatgatcctctccat 2050
>dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, complete cds Length = 2674 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2193 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2134 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccat 551 || | || ||||| || || || | |||||||||| ||||||| Sbjct: 2133 ttattagcatccgagagagtttgggactgcatgatcctctccat 2090
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 851 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 792 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccat 551 || | || ||||| || || || | |||||||||| ||||||| Sbjct: 791 ttattagcatccgagagagtttgggactgcatgatcctctccat 748
>dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, complete cds Length = 6679 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 448 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 507 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 5136 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 5077 Query: 508 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccat 551 || | || ||||| || || || | |||||||||| ||||||| Sbjct: 5076 ttattagcatccgagagagtttgggactgcatgatcctctccat 5033
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 439 cggagctccttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatg 498 ||||| ||||||||||| ||||| | || |||||||| || |||||||||||||||||| Sbjct: 80122 cggagttccttgatgatagggtgtctaggattgatctcaagaaccctcttgccgcgcatg 80063 Query: 499 tacgcctgctt 509 || || ||||| Sbjct: 80062 tatgcttgctt 80052
>gb|AY103538.1| Zea mays PCO150589 mRNA sequence Length = 2534 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 509 tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccacccat 568 |||||| |||| ||||| |||||||| ||||||| |||||||||||| | |||| |||| Sbjct: 1968 tgctcgagtccctcagggcctgtgccttcatgatcctctccatgttggcggtccagccat 1909 Query: 569 act 571 ||| Sbjct: 1908 act 1906
>gb|DQ084238.1| Leishmania donovani chagasi clone LCPE01EX020024H11.g 83 kDa heat shock protein (hsp83) mRNA, partial cds Length = 564 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 442 agctccttgatgatggggtgccgggggttgatctcca 478 |||||||||||||||||||| | |||||||| ||||| Sbjct: 136 agctccttgatgatggggtgtctggggttgagctcca 100
>gb|DQ084237.1| Leishmania donovani chagasi clone LCPE01EX020050A04.g 83 kDa heat shock protein (hsp83) mRNA, partial cds Length = 597 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 442 agctccttgatgatggggtgccgggggttgatctcca 478 |||||||||||||||||||| | |||||||| ||||| Sbjct: 513 agctccttgatgatggggtgtctggggttgagctcca 477
>emb|X87770.2|LIHSP83GN Leishmania infantum hsp83-1 gene for heat shock protein 83-1 and hsp83-2 gene for heat shock protein 83-2 Length = 3744 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 442 agctccttgatgatggggtgccgggggttgatctcca 478 |||||||||||||||||||| | |||||||| ||||| Sbjct: 1914 agctccttgatgatggggtgtctggggttgagctcca 1878
>gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (HSP90) mRNA, complete cds Length = 2553 Score = 48.1 bits (24), Expect = 0.040 Identities = 36/40 (90%) Strand = Plus / Minus Query: 532 gcctgcatgatcttctccatgttggagctccacccatact 571 |||| ||||||| |||||||||||| | |||||||||||| Sbjct: 1833 gccttcatgatcctctccatgttggcggtccacccatact 1794
>gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta (hsp90 beta) mRNA, complete cds Length = 2625 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 522 cagggtctgtgcctgcatgatcttctccatgttgg 556 ||||| |||||||| ||||||| |||||||||||| Sbjct: 1909 cagggcctgtgccttcatgatcctctccatgttgg 1875
>gb|AF384808.1| Cryptococcus neoformans var. grubii heat-shock protein 90 gene, partial cds Length = 2391 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 441 gagctccttgatgatggggtgccgggggttgatctcca 478 ||||||||||||||||||||| |||||||| ||||| Sbjct: 2154 gagctccttgatgatggggtgagaggggttgagctcca 2117
>gb|AY118578.1| Drosophila melanogaster LD43460 full insert cDNA Length = 1210 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 442 agctccttgatgatggggtgccgggggttgatctccag 479 |||| |||||||||||||||| |||||||||||||| Sbjct: 910 agcttcttgatgatggggtgctttgggttgatctccag 873
>ref|NM_058091.3| Drosophila melanogaster Trap1 CG3152-RA (Trap1), mRNA Length = 2478 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 442 agctccttgatgatggggtgccgggggttgatctccag 479 |||| |||||||||||||||| |||||||||||||| Sbjct: 2197 agcttcttgatgatggggtgctttgggttgatctccag 2160
>gb|AY122624.1| Dimastigella trypaniformis strain Ulm heat shock protein 90 (HSP-90) gene, partial cds Length = 1873 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 442 agctccttgatgatggggtgccgggggttgatctccag 479 |||||||||||||||| ||| | |||||||||||||| Sbjct: 1740 agctccttgatgatggcgtggctcgggttgatctccag 1703
>gb|AF115775.2|AF115775 Drosophila melanogaster Hsp90-related protein TRAP1 mRNA, complete cds Length = 2162 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 442 agctccttgatgatggggtgccgggggttgatctccag 479 |||| |||||||||||||||| |||||||||||||| Sbjct: 2000 agcttcttgatgatggggtgctttgggttgatctccag 1963
>gb|BT001316.1| Drosophila melanogaster AT15050 full insert cDNA Length = 2475 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 442 agctccttgatgatggggtgccgggggttgatctccag 479 |||| |||||||||||||||| |||||||||||||| Sbjct: 2193 agcttcttgatgatggggtgctttgggttgatctccag 2156
>gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence Length = 2179 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 528 ctgtgcctgcatgatcttctccatgttgg 556 |||||||| ||||||| |||||||||||| Sbjct: 1704 ctgtgccttcatgatcctctccatgttgg 1676
>emb|X98582.1|TAX98582 T.aestivum mRNA for HSP80-2 protein Length = 2378 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 532 gcctgcatgatcttctccatgttggagctccacccat 568 |||| ||||||| |||||||||||| | ||||||||| Sbjct: 1845 gccttcatgatcctctccatgttgggggtccacccat 1809
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 432 cttgtcacggagctccttgatgatg 456 ||||||||||||||| ||||||||| Sbjct: 1185035 cttgtcacggagctctttgatgatg 1185011
>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence Length = 183177 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 aaccatcacatttccagtcca 114 ||||||||||||||||||||| Sbjct: 132650 aaccatcacatttccagtcca 132630
>gb|AY109427.1| Zea mays CL1264_2 mRNA sequence Length = 1267 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 528 ctgtgcctgcatgatcttctccatgttgg 556 |||||||| ||||||| |||||||||||| Sbjct: 687 ctgtgccttcatgatcctctccatgttgg 659
>emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8, COMPLETE SEQUENCE Length = 165916 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 528 ctgtgcctgcatgatcttctccatgttgg 556 |||||||| ||||||| |||||||||||| Sbjct: 33488 ctgtgccttcatgatcctctccatgttgg 33460 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 528 ctgtgcctgcatgatcttctccatgttgg 556 |||||||| ||||||| |||||||||||| Sbjct: 22847 ctgtgccttcatgatcctctccatgttgg 22819
>gb|AC132137.3| Mus musculus BAC clone RP23-153E2 from 3, complete sequence Length = 196413 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 tctttctaatgagagctaaat 140 ||||||||||||||||||||| Sbjct: 30848 tctttctaatgagagctaaat 30828
>gb|M73492.1|LEIHSP90 Leishmania donovani heat shock protein 90 mRNA, 3' end Length = 2197 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 446 ccttgatgatggggtgccgggggttgatctcca 478 |||||||||||||||| | |||||||| ||||| Sbjct: 1105 ccttgatgatggggtgtctggggttgagctcca 1073
>gb|M92926.1|LEIHSP01 Leishmania amazonensis heat shock protein 83 gene, complete cds Length = 2106 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 442 agctccttgatgatggggtgccgggggttgatctcca 478 |||||||||||||||||||| |||||||| ||||| Sbjct: 1853 agctccttgatgatggggtgtttggggttgagctcca 1817
>gb|BC041635.1| Homo sapiens SLIT-ROBO Rho GTPase activating protein 2, mRNA (cDNA clone IMAGE:4862729) Length = 2505 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 387 cctcgccgtctgcttcaggccctcgcta 414 ||||||| |||||||| ||||||||||| Sbjct: 760 cctcgccatctgcttcgggccctcgcta 787
>ref|XM_514148.1| PREDICTED: Pan troglodytes formin binding protein 2 (LOC457680), mRNA Length = 5062 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 387 cctcgccgtctgcttcaggccctcgcta 414 ||||||| |||||||| ||||||||||| Sbjct: 573 cctcgccatctgcttcgggccctcgcta 600
>ref|NM_015326.1| Homo sapiens SLIT-ROBO Rho GTPase activating protein 2 (SRGAP2), mRNA Length = 6305 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 387 cctcgccgtctgcttcaggccctcgcta 414 ||||||| |||||||| ||||||||||| Sbjct: 1989 cctcgccatctgcttcgggccctcgcta 2016
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 ggaggtgaccaccacacagg 592 |||||||||||||||||||| Sbjct: 1304504 ggaggtgaccaccacacagg 1304485
>gb|AY391259.1| Perkinsus marinus heat shock protein 90 gene, partial cds Length = 1877 Score = 40.1 bits (20), Expect = 9.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 532 gcctgcatgatcttctccatgttggagctccacccatacttggaggtg 579 |||| ||||||| |||||||||||| | |||| || |||| ||||||| Sbjct: 1876 gccttcatgatcctctccatgttggcggtccagccgtactcggaggtg 1829
>ref|XM_646103.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (177.t00014) partial mRNA Length = 609 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ctggtacagtagtacattac 24 |||||||||||||||||||| Sbjct: 77 ctggtacagtagtacattac 58
>ref|XM_646496.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (157.t00015) partial mRNA Length = 1128 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ctggtacagtagtacattac 24 |||||||||||||||||||| Sbjct: 77 ctggtacagtagtacattac 58
>emb|AL161736.33| Human DNA sequence from clone RP11-421E17 on chromosome 1 Contains the 3' end of the FNBP2 gene for formin binding protein 2 and a RAP1, GTP-GDP dissociation stimulator 1 (RAP1GDS1) pseudogene, complete sequence Length = 159474 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 387 cctcgccgtctgcttcaggccctcgcta 414 ||||||| |||||||| ||||||||||| Sbjct: 137242 cctcgccatctgcttcgggccctcgcta 137269
>ref|XM_936300.1| PREDICTED: Homo sapiens SLIT-ROBO Rho GTPase activating protein 2 (SRGAP2), mRNA Length = 4985 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 387 cctcgccgtctgcttcaggccctcgcta 414 ||||||| |||||||| ||||||||||| Sbjct: 630 cctcgccatctgcttcgggccctcgcta 657
>gb|AY942619.1| Leishmania braziliensis strain MHOM/PE/95/LQ2 heat shock protein (hsp-83) gene, complete cds Length = 3520 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 agctccttgatgatggggtg 461 |||||||||||||||||||| Sbjct: 2455 agctccttgatgatggggtg 2436
>gb|AF313474.1| Entamoeba histolytica retrotransposon-like element RLEEh2 Length = 2473 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ctggtacagtagtacattac 24 |||||||||||||||||||| Sbjct: 274 ctggtacagtagtacattac 293
>gb|AF247812.1|AF247812 Rattus norvegicus transcription factor FKHR mRNA, partial cds Length = 1000 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 atctccaggaccctcttgcc 491 |||||||||||||||||||| Sbjct: 336 atctccaggaccctcttgcc 317
>ref|XM_342244.2| PREDICTED: Rattus norvegicus forkhead box O1A (Foxo1a), mRNA Length = 4171 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 atctccaggaccctcttgcc 491 |||||||||||||||||||| Sbjct: 1259 atctccaggaccctcttgcc 1240
>gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds Length = 2397 Score = 40.1 bits (20), Expect = 9.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 509 tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttgg 556 |||||| |||| ||||| ||| |||| ||||||| |||||||||||| Sbjct: 1898 tgctcgtgtccctcagggcctgggccttcatgatcctctccatgttgg 1851
>dbj|AB007925.1| Homo sapiens mRNA for KIAA0456 protein, partial cds Length = 6305 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 387 cctcgccgtctgcttcaggccctcgcta 414 ||||||| |||||||| ||||||||||| Sbjct: 1989 cctcgccatctgcttcgggccctcgcta 2016
>dbj|D86216.1| Thermus aquaticus DNA for trehalose synthase, complete cds Length = 4219 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 ttgatctccaggaccctcttgccg 492 |||| ||||||||||||||||||| Sbjct: 485 ttgagctccaggaccctcttgccg 462 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,119,406 Number of Sequences: 3902068 Number of extensions: 4119406 Number of successful extensions: 94601 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94422 Number of HSP's gapped (non-prelim): 176 length of query: 718 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 695 effective length of database: 17,143,297,704 effective search space: 11914591904280 effective search space used: 11914591904280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)